Sed0008838 (gene) Chayote v1

Overview
NameSed0008838
Typegene
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L8
LocationLG07: 41905831 .. 41908360 (+)
RNA-Seq ExpressionSed0008838
SyntenySed0008838
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTCCCAATCCAAACAACACAACCTTCCACCTCAACCCAAACACCACCAATCAAACATCTCTAAAAACCCTAATCCCCATCTTCTTCAACCTCTGAACCACAGCCCCATTTTTCTGAAAACCCTAATTTCCCCAATGGGACGCGTAATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCACACACGCACCACCGCAAGGGCCCTGCCCGGTTCCGCTCTCTCGACTTCGGCGAGCGCAACGGCTACCTGAAAGGCGTGGTTCAGGAGATCATCCACGATCCGGGCAGAGGCGCGCCGCTTGCCCGCGTCACGTTCCGCCACCCGTTCCGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCGGCCAATTCGTCTACTGTGGGAAGAAGGCGAATCTTGTCGTCGGGAACGTTCTTCCTGTTAGAGCCATTCCTGAAGGTGCTGTGATTTGTAATGTCGAACATCATGTTGGTGACCGTGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTGATTAGTCACAATCCTGAGAATGATACCAGCAGGTAAATTTGGATTTCTGTCATCTACGTTCGTTGAAGGGTTTATGAATTTGTGTTTTGCATGTTGTTCTAGGTTTTTTGTATGTGTTTGTGCTATAAGTTTGAATGAAAGCTGTAATTAACTGAATTGAATAAAGGGTTTGACTTTTCCCAAGGAGTGGCACAATGGTTGAAGGCTTGGACTTTGCGTATGCTCCCACAGCTGTGACATTAGTCCTCCGATGTCTCTGGTGTCGGCCTAGAGACGGGTGTGGTTACCTTGTCTCAAATTTTTTTTGTGATATGAGATTGCAGATTTAAGATGTTTAGTTTGGGCTACGGACTCTGTTTCTTGTTTATATTAATTTTATATGGTATGTTTATCTTCATTGTTGTGTAAATATATGTTCTTTGTAATTAGTTTTTTGCTTTTTTTTCTAATAGTTTCATTTGTGCTCGAGTTGAGTAGTAATTTGATTGATATGTGGGAACAAACTTATTGACAGCATGAAAGAATTTGTGAGGATGGTTGGGAAGGAAGAGGATAATTTTGCAGAAAATAGGATTATACAGTTTTATTTTTATGAGGCTGTAATGCTTTTAGCTTTTTTGAGTACATTGGTATTAATTCTTTTTGTAACTAATTCTGCTCCTAATGGCGCAGTGGTTTAAGACTTGGGCTTTGAAGGTATGTTTTCCTCAAGGTCCTAGGTCTGTGACATTACTCCTTCTATGTCTCTGGAGCTTGGCCTAGGGACGGGCGTGGTTACCTTATTTCAAAAAAAGAAAAAATCTGCTCCTAATCTTGTTTTGTAGTTTTGTTTCTTAATTTCATTTGATTGATGTTTTTTTTTGTTGAACTTCTGTGAGCAGGCATACTACATGAATTGAACTCAACTTCTTAGATTCCCAAGGACCATCTATGACCACTAGGCTAACCTATGATTTGGTTTATTGATATCGTCACACTTCCAGTAAAAGAATTATCATCTGTGCGAAGTAATTTTAAATTATGTTCTTGGAGATCTGCCTCTTTTCTCCTGATCCGAAAATGAACACTATAGATGAACCATTTTTTTCACTCTTATAAGTTTGAACTTTTTTCCTTTCATTATATCAACAAAAAGTTCCTTGTTTCAAATTTGAACCATTTTGCCTCCTTAGAACTTAAGAATATACATGGAAAAGAATAATGGAGGCTAGTGTGTTTCAGAGCAGTCAAATGTGATTGTGTTTACTAATACTTCTTGAGTTTAGTTCCTTGGCTCGAGTCTATAGACAATTTTTCGACTTCATTCGATTCTTCCTATCCTTCATCTCTAATTTCATCTTTTGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCAAGCGGGTGTCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTATGCTCAAGGCTGGTAATGCTTACCACAAGTTCCGCGTCAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTCGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTTCGTCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGACGGCTCCGTGGACAGGCTGCTGCTTCTGCTGCGAAGGCCGACAAAGCTTAGAGCAATTCAACCTGTTCGACGCATCTTTTGCCTAATCCTCAGTTACCTTCTATCATGTTTTTTTTGGATTTGCATTATGTTGAAGACTATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAAGATCCTTTTTTTAACACAATCTTCTCTCCCTTATTTCTGTTGACACATTGAATTTAAAAAAACATGAGCACCCAAGTAGTAATATCTGTCAAAATGGGCAGGTTATGGGAGACTTTAACTAGCCACAAGTCCCATTTACAATGATATCTATTGATAATGAAAAGTTACTTGAAAA

mRNA sequence

CATTCCCAATCCAAACAACACAACCTTCCACCTCAACCCAAACACCACCAATCAAACATCTCTAAAAACCCTAATCCCCATCTTCTTCAACCTCTGAACCACAGCCCCATTTTTCTGAAAACCCTAATTTCCCCAATGGGACGCGTAATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCACACACGCACCACCGCAAGGGCCCTGCCCGGTTCCGCTCTCTCGACTTCGGCGAGCGCAACGGCTACCTGAAAGGCGTGGTTCAGGAGATCATCCACGATCCGGGCAGAGGCGCGCCGCTTGCCCGCGTCACGTTCCGCCACCCGTTCCGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCGGCCAATTCGTCTACTGTGGGAAGAAGGCGAATCTTGTCGTCGGGAACGTTCTTCCTGTTAGAGCCATTCCTGAAGGTGCTGTGATTTGTAATGTCGAACATCATGTTGGTGACCGTGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTGATTAGTCACAATCCTGAGAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCAAGCGGGTGTCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTATGCTCAAGGCTGGTAATGCTTACCACAAGTTCCGCGTCAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTCGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTTCGTCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGACGGCTCCGTGGACAGGCTGCTGCTTCTGCTGCGAAGGCCGACAAAGCTTAGAGCAATTCAACCTGTTCGACGCATCTTTTGCCTAATCCTCAGTTACCTTCTATCATGTTTTTTTTGGATTTGCATTATGTTGAAGACTATATTTAGAAGTTTTTGTCCCAAGTTTTGTTACAAGATCCTTTTTTTAACACAATCTTCTCTCCCTTATTTCTGTTGACACATTGAATTTAAAAAAACATGAGCACCCAAGTAGTAATATCTGTCAAAATGGGCAGGTTATGGGAGACTTTAACTAGCCACAAGTCCCATTTACAATGATATCTATTGATAATGAAAAGTTACTTGAAAA

Coding sequence (CDS)

ATGGGACGCGTAATCAGAGCTCAACGTAAGGGTGCCGGATCAGTTTTCCGGTCACACACGCACCACCGCAAGGGCCCTGCCCGGTTCCGCTCTCTCGACTTCGGCGAGCGCAACGGCTACCTGAAAGGCGTGGTTCAGGAGATCATCCACGATCCGGGCAGAGGCGCGCCGCTTGCCCGCGTCACGTTCCGCCACCCGTTCCGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCGGCCAATTCGTCTACTGTGGGAAGAAGGCGAATCTTGTCGTCGGGAACGTTCTTCCTGTTAGAGCCATTCCTGAAGGTGCTGTGATTTGTAATGTCGAACATCATGTTGGTGACCGTGGTGTGTTTGCTAGATGCTCTGGTGATTATGCTATTGTGATTAGTCACAATCCTGAGAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCAAGCGGGTGTCGTGCTATGATCGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTATGCTCAAGGCTGGTAATGCTTACCACAAGTTCCGCGTCAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTCGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGTCACGCCAGTACCGTTCGTCGTGATGCCCCGCCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGACGGCTCCGTGGACAGGCTGCTGCTTCTGCTGCGAAGGCCGACAAAGCTTAG

Protein sequence

MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHVGDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAASAAKADKA
Homology
[Close]
BLAST of Sed0008838 vs. NCBI nr
Match: XP_004151970.1 (60S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_011442 [Cucumis sativus])

HSP 1 Score: 528.1 bits (1359), Expect = 4.3e-146
Identity = 254/260 (97.69%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+AAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. NCBI nr
Match: XP_008454581.1 (PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal protein L8 [Benincasa hispida])

HSP 1 Score: 527.7 bits (1358), Expect = 5.6e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+AAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. NCBI nr
Match: KAG7015230.1 (60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526.9 bits (1356), Expect = 9.6e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 51  MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 110

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 111 VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 170

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 171 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 230

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 231 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 290

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+A+KADKA
Sbjct: 291 RRTGRLRGQAAATASKADKA 310

[Close]
BLAST of Sed0008838 vs. NCBI nr
Match: XP_022139448.1 (60S ribosomal protein L8-like [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 9.6e-146
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADK 260
           RRTGRLRGQAAA+AAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]
BLAST of Sed0008838 vs. NCBI nr
Match: XP_022940519.1 (60S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal protein L8 [Cucurbita maxima] >XP_023521974.1 60S ribosomal protein L8 [Cucurbita pepo subsp. pepo] >KAG6607833.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 526.9 bits (1356), Expect = 9.6e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+A+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.1e-143
Identity = 242/260 (93.08%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPARFR+LDFGERNGYLKGV+ E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAV+CNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+N T+R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQA A+AAKADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 501.1 bits (1289), Expect = 7.4e-141
Identity = 240/258 (93.02%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           V FRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFAR SGDYAIVI+HNP+NDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 498.4 bits (1282), Expect = 4.8e-140
Identity = 239/258 (92.64%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGV AR SGDYAIVI+HNP++DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKAD 259
           RRTGRLRGQAAASAAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 8.2e-140
Identity = 237/260 (91.15%), Postives = 251/260 (96.54%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGV+ E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFR+PFRY HQKELFVAAEGMYTGQFVYCGKKA L+VGNVLP+R+IPEGAV+CNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSG YAIVISHNP+N T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+AAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 452.2 bits (1162), Expect = 3.9e-126
Identity = 218/259 (84.17%), Postives = 237/259 (91.51%), Query Frame = 0 

Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHH 120
           RV FRHPFRY  QKELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAVICNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPM 180
           VGDRG  AR SGDYAIVI+HNPE++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKP+
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAASAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match: A0A0A0L7L1 (Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403970 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 254/260 (97.69%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+AAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match: A0A1S3BYI5 (60S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.7e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+AAKADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match: A0A6J1J2H3 (60S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+A+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match: A0A6J1CFM0 (60S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADK 260
           RRTGRLRGQAAA+AAKADK
Sbjct: 241 RRTGRLRGQAAATAAKADK 259

[Close]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match: A0A6J1FKG6 (60S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146
Identity = 253/260 (97.31%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLP+RAIPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFARCSGDYAIVISHNP+NDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKADKA 261
           RRTGRLRGQAAA+A+KADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Sed0008838 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 501.1 bits (1289), Expect = 5.3e-142
Identity = 240/258 (93.02%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           V FRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGVFAR SGDYAIVI+HNP+NDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKAD 259
           RRTGRLRGQAAA A+KAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]
BLAST of Sed0008838 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 498.4 bits (1282), Expect = 3.4e-141
Identity = 239/258 (92.64%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVF+SHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHV 120
           VTFRHPFR+K QKELFVAAEGMYTGQF+YCGKKA LVVGNVLP+R+IPEGAV+CNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180
           GDRGV AR SGDYAIVI+HNP++DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKPML
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAASAAKAD 259
           RRTGRLRGQAAASAAKAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]
BLAST of Sed0008838 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-127
Identity = 218/259 (84.17%), Postives = 237/259 (91.51%), Query Frame = 0 

Query: 1   MGRVIRAQRKG-AGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVF+SHTHHRKGPA+FRSLD+GERNGYLKG+V EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHH 120
           RV FRHPFRY  QKELFVAAEGMYTGQ++YCGKKANL+VGNVLP+ +IPEGAVICNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPM 180
           VGDRG  AR SGDYAIVI+HNPE++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKP+
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAASAAKAD 259
           ARRTGR RG AA  AAKAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]
BLAST of Sed0008838 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-22
Identity = 66/215 (30.70%), Postives = 104/215 (48.37%), Query Frame = 0 

Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHVGDR 123
                   +K   +   G   G  +  G +  + +GN LP+  +P G  I N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAG 183
           G  AR +G  A +I+   E  ++ +KLPSG  +++   C A +GQV   G  +K + +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]
BLAST of Sed0008838 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 102.8 bits (255), Expect = 4.2e-22
Identity = 66/215 (30.70%), Postives = 104/215 (48.37%), Query Frame = 0 

Query: 4   VIRAQRKGAGSVFRSHTHHRKGPARFRSLDFGERNGYLKGVVQEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRAIPEGAVICNVEHHVGDR 123
                   +K   +   G   G  +  G +  + +GN LP+  +P G  I N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPENDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAG 183
           G  AR +G  A +I+   E  ++ +KLPSG  +++   C A +GQV   G  +K + +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:
BLAST of Sed0008838 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151970.14.3e-14697.6960S ribosomal protein L8 [Cucumis sativus] >KGN57945.1 hypothetical protein Csa_... [more]
XP_008454581.15.6e-14697.31PREDICTED: 60S ribosomal protein L8 [Cucumis melo] >XP_038899159.1 60S ribosomal... [more]
KAG7015230.19.6e-14697.3160S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022139448.19.6e-14697.3060S ribosomal protein L8-like [Momordica charantia][more]
XP_022940519.19.6e-14697.3160S ribosomal protein L8 [Cucurbita moschata] >XP_022981583.1 60S ribosomal prot... [more]
BLAST of Sed0008838 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P297662.1e-14393.0860S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1[more]
Q420647.4e-14193.0260S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2[more]
P462864.8e-14092.6460S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2[more]
P259988.2e-14091.1560S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1[more]
Q4PSL73.9e-12684.1760S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3[more]
BLAST of Sed0008838 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7L12.1e-14697.69Ribosomal_L2_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403... [more]
A0A1S3BYI52.7e-14697.3160S ribosomal protein L8 OS=Cucumis melo OX=3656 GN=LOC103494968 PE=3 SV=1[more]
A0A6J1J2H34.6e-14697.3160S ribosomal protein L8 OS=Cucurbita maxima OX=3661 GN=LOC111480658 PE=3 SV=1[more]
A0A6J1CFM04.6e-14697.3060S ribosomal protein L8-like OS=Momordica charantia OX=3673 GN=LOC111010376 PE=... [more]
A0A6J1FKG64.6e-14697.3160S ribosomal protein L8 OS=Cucurbita moschata OX=3662 GN=LOC111446091 PE=3 SV=1[more]
BLAST of Sed0008838 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G36130.15.3e-14293.02Ribosomal protein L2 family [more]
AT2G18020.13.4e-14192.64Ribosomal protein L2 family [more]
AT3G51190.12.8e-12784.17Ribosomal protein L2 family [more]
ATCG00830.14.2e-2230.70ribosomal protein L2 [more]
ATCG01310.14.2e-2230.70ribosomal protein L2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 96..231
e-value: 1.1E-66
score: 237.5
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 98..224
e-value: 1.6E-44
score: 151.0
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 11..90
e-value: 3.7E-34
score: 129.5
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 1..254
e-value: 9.7E-70
score: 232.8
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..260
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 170..247
e-value: 1.3E-43
score: 149.3
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 13..90
e-value: 2.1E-18
score: 66.1
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 90..169
e-value: 1.2E-25
score: 91.2
NoneNo IPR availableGENE3D2.40.50.140coord: 1..86
e-value: 9.3E-41
score: 139.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..230
NoneNo IPR availablePANTHERPTHR13691:SF4860S RIBOSOMAL PROTEIN L8coord: 1..260
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 197..208
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..97
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 99..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008838.1Sed0008838.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome