Sed0008835 (gene) Chayote v1

Overview


Name	Sed0008835
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF1218)
Location	LG05: 37529105 .. 37531503 (+)
RNA-Seq Expression	Sed0008835
Synteny	Sed0008835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATTAGTCCACATTTTCTGAATTATCAACCGTTTCGAAAATGAAGAAAACGCTATGGGCATAATGGGAATTTGAGCCATTATTTTCTCTTTCTAACCTCTTCTTTTTCTTCACCGTTTTTCGCCAAAACAGAGCTTCCACAAACCAAACTTTGCTGAATCTGCACAAGAACACGGGCAACAGTGCAGATCTGATATTTAGAAAAGCTTTGAAGCAGAGCATTTCGTCAATCAATGGCTTCCAAATTGATTCTCATTTTAGTTTTAGTGTTCGACGTCGTTGCTTTTGGCCTGGCCGTAGCTGCTGAGCGAAGAAGAAGCACTGTAAGCTCCAGTTTCTCTTATTCTTCTGTGCTCTTTACTGCAATTTTGTCGATTTTGGGTCTGTTTGTGTGTTTTTTGCTTCAAATTAGTTCGTTCAATGTTGATTATGTGGTACTGGCCCATCTATTAGGGTTCACTAAATTGTTTCTTTACTAATTTAAAAGAAGGAAAATGGAATTGGGGAAACTTACTTAAATACTCAAATCTAGAAAATAATTAGGTCACTTTTGAAAATGAGTATTGTCAATTAATTAGTATTTATCAGTGTTAATGACTATAGTACCATTTCCCTATTATTTATTATTATTTTTAATTTTACTAAGATTGTGTTTTGTATAGTGTCATAGAAAAGTTTAGAAGACCATTGGCATTCTCATGATTTAGAGCAAACTAAGAATATGGTTCAGTCGTGGCCAACCTGAGAATATAGTTCAACTGGTTAAAGATAATGTCAAAAGTTTGAATTCTCCAAGATATAATTCAATATATTGGTAGTATGCTTTGGCTTTTTCTAAAATGCAATTCTGAACTGTTCTGAAATCAAGTATTAGGAAACTTCCATGGACTTCTCTGTTTCTTCTAAGTTCTAAGCACATTACTTTCCAAAAGGTAGAGGTGTTTAGCTTTTGATATAGAAAATGGTAAAATTTTGATTATTGTTGATAAGCTTGATCAAATGGAAGCCTTTATATTAGAATGAGTGAAGAACACAAACTTGAAATCAGTTTTGTTTCCTACCCTCATGATTTATTCTTTGCTTGAAAGATAAAATAGTTGGTTTCAACTTATTAGTTATGCCTATATGATAAAATTGGTTGATATAATTAAACTTACTCTAATCCATCTGTTTAAGTTTTTGAGTTGATTGACGATTTAACGTGCTTTTACATAGTATTTGAGTTGTGTTTAAACCCATGCCGAGTTAGTTCATCCCCAATTTATATTGATTTCGGTTAGTATAATTAAATTTACTCCAATCCATCGACTTAAACTTTGGTTAGTTGATAATTTAACATGTTTCAACAAATTTACTAATATAGGATTTTATCCATTCACATGGATATTGGTGATACACTGTTTGCGAGTGTCGTCTGTAACTCTATGGGCTCATTGGTTGATTGTTATGAAGTAATTGTATCTGTGTTTATGTATTTGTCATCCGTTAACAGGCCACGGTTGTGCAAGATTCAGAAAAGACTCACAATTATTGTGTCTATCACTCCGACATCTCAACAGGCTATGGCGTTGGCGCTTTTCTACTTCTGATGGCCAGCCAGTCCCTCATAATGGTAGCTAGTCGATGTTTTTGCTGCGGCAAGTCATTGAATCCGGGTGGTTCAAGGGCCTGGGCTATTATCCTATTTATAACCTGCTGGTAAGTGATCTTCACTCTATCAGTTTAGCCTTGAGGAGAAAACTTCAAACGAAAGGGTCCAAACTCGATACACACAATTTGCAGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTTGCGGGTTCGATAAGGAATGCCTACCACACCAAGTACCGGACCGTATTCAGCGAGAATCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTCAATGCCATTGTATCTGCACTTTACTATGTATTCTACTCGAAGGCGAGAGAAGGCTTCCTTCCGTACAGTGGAGAGACTGGCGTCGGCATGGGAACCTACAAATGACTGTATGTGTGTAGTTAAGCATAACAGGTTTTATTCATCTTCTATTGATGGTTTCGGTTTTGGGATAACTTTGCATATCAAGTACTGGTTTTAGTTAGGAAGAAATGTCAATCAGTATCATAATATTTATTCTGTCAAGTTCTTTGTTTTCTCTTCCTTTTGATCAATGCTGGGCTTTTTTTAGGTGGATTGTTACATTTATATTCCTGTAAGTATTTGTCACTCTTATGAAAACTCAGTCATTATATGTTCTTATATATTCCATTTTTACCACCGAGTATTTGATCATATAGCAGAAAAGACTGAAGATTATGGCTCTTTCTCATCCAAATAATATTCCAAAATTTGCAGCGAA

mRNA sequence

AAAAAATTAGTCCACATTTTCTGAATTATCAACCGTTTCGAAAATGAAGAAAACGCTATGGGCATAATGGGAATTTGAGCCATTATTTTCTCTTTCTAACCTCTTCTTTTTCTTCACCGTTTTTCGCCAAAACAGAGCTTCCACAAACCAAACTTTGCTGAATCTGCACAAGAACACGGGCAACAGTGCAGATCTGATATTTAGAAAAGCTTTGAAGCAGAGCATTTCGTCAATCAATGGCTTCCAAATTGATTCTCATTTTAGTTTTAGTGTTCGACGTCGTTGCTTTTGGCCTGGCCGTAGCTGCTGAGCGAAGAAGAAGCACTGCCACGGTTGTGCAAGATTCAGAAAAGACTCACAATTATTGTGTCTATCACTCCGACATCTCAACAGGCTATGGCGTTGGCGCTTTTCTACTTCTGATGGCCAGCCAGTCCCTCATAATGGTAGCTAGTCGATGTTTTTGCTGCGGCAAGTCATTGAATCCGGGTGGTTCAAGGGCCTGGGCTATTATCCTATTTATAACCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTTGCGGGTTCGATAAGGAATGCCTACCACACCAAGTACCGGACCGTATTCAGCGAGAATCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTCAATGCCATTGTATCTGCACTTTACTATGTATTCTACTCGAAGGCGAGAGAAGGCTTCCTTCCGTACAGTGGAGAGACTGGCGTCGGCATGGGAACCTACAAATGACTGTATGTGTGTAGTTAAGCATAACAGGTTTTATTCATCTTCTATTGATGGTTTCGGTTTTGGGATAACTTTGCATATCAAGTACTGGTTTTAGTTAGGAAGAAATGTCAATCAGTATCATAATATTTATTCTGTCAAGTTCTTTGTTTTCTCTTCCTTTTGATCAATGCTGGGCTTTTTTTAGGTGGATTGTTACATTTATATTCCTGTAAGTATTTGTCACTCTTATGAAAACTCAGTCATTATATGTTCTTATATATTCCATTTTTACCACCGAGTATTTGATCATATAGCAGAAAAGACTGAAGATTATGGCTCTTTCTCATCCAAATAATATTCCAAAATTTGCAGCGAA

Coding sequence (CDS)

ATGGCTTCCAAATTGATTCTCATTTTAGTTTTAGTGTTCGACGTCGTTGCTTTTGGCCTGGCCGTAGCTGCTGAGCGAAGAAGAAGCACTGCCACGGTTGTGCAAGATTCAGAAAAGACTCACAATTATTGTGTCTATCACTCCGACATCTCAACAGGCTATGGCGTTGGCGCTTTTCTACTTCTGATGGCCAGCCAGTCCCTCATAATGGTAGCTAGTCGATGTTTTTGCTGCGGCAAGTCATTGAATCCGGGTGGTTCAAGGGCCTGGGCTATTATCCTATTTATAACCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTTGCGGGTTCGATAAGGAATGCCTACCACACCAAGTACCGGACCGTATTCAGCGAGAATCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTCAATGCCATTGTATCTGCACTTTACTATGTATTCTACTCGAAGGCGAGAGAAGGCTTCCTTCCGTACAGTGGAGAGACTGGCGTCGGCATGGGAACCTACAAATGA

Protein sequence

MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFLLLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHTKYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGMGTYK

Homology

[Close]

BLAST of Sed0008835 vs. NCBI nr
Match: XP_022935762.1 (uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 uncharacterized protein LOC111796652 [Cucurbita pepo subsp. pepo] >KAG6591977.1 hypothetical protein SDJN03_14323, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024853.1 hypothetical protein SDJN02_13672 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 163/184 (88.59%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL+LI+V+V DV+AFGLAVAAE+RRSTA VV DSEK +NYCVY SDISTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIMVASRCFCCGKSL+PGGSRAWAIILFI CWVFFFIAEVCLFAGSIRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. NCBI nr
Match: XP_022976585.1 (uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharacterized protein LOC111476938 [Cucurbita maxima])

HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL+LI+V+V DV+AFGLAVAAE+RRSTA VV DSEK +NYCVY SD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIMVASRCFCCGKSL+PGGSRAWAIILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. NCBI nr
Match: XP_038900268.1 (uncharacterized protein LOC120087350 [Benincasa hispida])

HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87
Identity = 162/184 (88.04%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V DV+AFGLAVAAE+RRSTA VVQD EK +NYCVY SDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIMVASRCFCCGKSL+PGGSRAWA+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. NCBI nr
Match: XP_031740219.1 (uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharacterized protein LOC101208795 [Cucumis sativus] >KGN55148.1 hypothetical protein Csa_012625 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 9.3e-87
Identity = 160/184 (86.96%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V D++AFGLAVAAE+RRSTA VVQD EK +NYCVY SDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIM ASRCFCCGKSL+PGGSRAWA+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. NCBI nr
Match: XP_008452482.1 (PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa] >TYK20240.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.3 bits (830), Expect = 6.7e-85
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V DV+AFGLAVAAE+RRSTA VVQD EK +NYCVY SD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIM ASRCFCCGKSL+PGGSRA A+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. ExPASy TrEMBL
Match: A0A6J1F6H9 (uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC111442584 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.0e-88
Identity = 163/184 (88.59%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL+LI+V+V DV+AFGLAVAAE+RRSTA VV DSEK +NYCVY SDISTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIMVASRCFCCGKSL+PGGSRAWAIILFI CWVFFFIAEVCLFAGSIRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. ExPASy TrEMBL
Match: A0A6J1IJW2 (uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 161/184 (87.50%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL+LI+V+V DV+AFGLAVAAE+RRSTA VV DSEK +NYCVY SD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIMVASRCFCCGKSL+PGGSRAWAIILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. ExPASy TrEMBL
Match: A0A0A0L071 (Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87
Identity = 160/184 (86.96%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V D++AFGLAVAAE+RRSTA VVQD EK +NYCVY SDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIM ASRCFCCGKSL+PGGSRAWA+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC+TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. ExPASy TrEMBL
Match: A0A5A7VBE4 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003790 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.2e-85
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V DV+AFGLAVAAE+RRSTA VVQD EK +NYCVY SD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIM ASRCFCCGKSL+PGGSRA A+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. ExPASy TrEMBL
Match: A0A1S3BTB6 (uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.2e-85
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKLILI+V V DV+AFGLAVAAE+RRSTA VVQD EK +NYCVY SD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ+LIM ASRCFCCGKSL+PGGSRA A+ILFI CWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYRT+F +NPPSC TLRKGVFGAGAAFIFLNAIVS LYYVFYSKARE FLPY GETGVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of Sed0008835 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-64
Identity = 119/173 (68.79%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASK++  +V VF+++AFGLAVAAE+RRSTA VVQD+E  +NYCVY SD +TGYGVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
             +ASQ LIM+ SRCFCCGK L PGGSRA A+ILFI  W+FF IAE+CL AGS+ NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFL-PY 173
           KYRT+F +NPP C+TLRKGVF AGA+F+F NAIVS  YY FY  A E  L PY
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLSPY 173

[Close]

BLAST of Sed0008835 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-60
Identity = 111/170 (65.29%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL++I+V + D++A GLA+AAE+RRS   V  D +K ++YCVY +DI+T YG GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LL  SQ LIM ASRCFCCGKSLNPGGSRA AIILF+ CWVFF IAE+CL A SIRNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTVFS-ENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGF 170
           +YR ++  E+PPSCE +RKGVF AGAAF    AIVS  YYV YS+AR+ +
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAY 170

[Close]

BLAST of Sed0008835 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 227.6 bits (579), Expect = 7.9e-60
Identity = 110/170 (64.71%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MASKL++I+V + D++A GLA+AAE+RRS   VV D EK   +C Y SDI+T YG GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           LL  SQ +IMVASRCFCCGK+L PGGSRA  I+LF+ CWVFF IAEVCL AGSIRNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTVFS-ENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGF 170
            YR +++ ENPPSCE +RKGVF AGA+F    AIVS  YY+ YS+AR+G+
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGY 170

[Close]

BLAST of Sed0008835 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-59
Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 1   MASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFL 60
           MAS L+L+LV VFD++AFGLAVAAE+RR+T  + ++S +  +YCVY  DI+TG GVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFL 60

Query: 61  LLMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHT 120
           +L+ASQ LIMVASRC CCG++L P GSR+WAI LFIT WVFFFIA+VCL AGS+RNAYHT
Sbjct: 61  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 120

Query: 121 KYRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKAREGFLPYSGETGVGM 180
           KYR  F    PSC +LRKGVFGAGAAFI L  IVS LYYV  S+A++ F P S + G+ M
Sbjct: 121 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD-FQP-SRDPGIRM 179

Query: 181 GT 183
            +
Sbjct: 181 SS 179

[Close]

BLAST of Sed0008835 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 81/164 (49.39%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 2   ASKLILILVLVFDVVAFGLAVAAERRRSTATVVQDSEKTHNYCVYHSDISTGYGVGAFLL 61
           AS L+ ILV+   +VAFG ++AAERRRS    +QD      +CVY SD++TGYGVGAFL 
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMASQSLIMVASRCFCCGKSLNPGGSRAWAIILFITCWVFFFIAEVCLFAGSIRNAYHTK 121
           L++S+SL+M  ++C C G+ L PG  RAW+II FI+ W+ F +AE C+ AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTVFSENPPSCETLRKGVFGAGAAFIFLNAIVSALYYVFYSKA 166
           Y    S    SC +LRKG+F AGA FI    +++  YY++++K+
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Sed0008835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935762.1	1.4e-87	88.59	uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 unchar...	[more]
XP_022976585.1	2.5e-87	87.50	uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharac...	[more]
XP_038900268.1	2.5e-87	88.04	uncharacterized protein LOC120087350 [Benincasa hispida]	[more]
XP_031740219.1	9.3e-87	86.96	uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharact...	[more]
XP_008452482.1	6.7e-85	86.41	PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF...	[more]

BLAST of Sed0008835 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0008835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6H9	7.0e-88	88.59	uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A6J1IJW2	1.2e-87	87.50	uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938...	[more]
A0A0A0L071	4.5e-87	86.96	Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1	[more]
A0A5A7VBE4	3.2e-85	86.41	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BTB6	3.2e-85	86.41	uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=...	[more]

BLAST of Sed0008835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27435.1	2.4e-64	68.79	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	6.1e-60	65.29	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	7.9e-60	64.71	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.4e-59	64.29	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	2.0e-42	49.39	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 58..152 e-value: 8.4E-28 score: 96.7
None	No IPR available	PANTHER	PTHR31769:SF56	SUBFAMILY NOT NAMED	coord: 1..184
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008835.1	Sed0008835.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane