Sed0008813 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAAAAAAAAAATGCCTGAGAGAAAGAAGATGAAGGTGAAGAAAGGATGGTTAGTTGTGGAAGTAGGGTTGGAAGAGGAAGATGAAAGAATAGAGAGATTTGTGGTTCCAATAGCCTATTTATATCACCCTTATTTCAAGAAGCTCTTGGACAAGGCTCAAGAAATCTATGGCTACCATGCCAACGGCCCGCTTCGGATTCCGTGCTCGGTCGATGACTTTCTACAGCTTCGATGGCTAATCGAGAAAGAAGATGATCAACACACCAACAAACATAAAAATAATCATCAACATCATGGTTACCATCACCTTCCGCTTGCTTTGTCTTTCCACTCTTGTTGA AAAAAAAGAAAAAAAAAATGCCTGAGAGAAAGAAGATGAAGGTGAAGAAAGGATGGTTAGTTGTGGAAGTAGGGTTGGAAGAGGAAGATGAAAGAATAGAGAGATTTGTGGTTCCAATAGCCTATTTATATCACCCTTATTTCAAGAAGCTCTTGGACAAGGCTCAAGAAATCTATGGCTACCATGCCAACGGCCCGCTTCGGATTCCGTGCTCGGTCGATGACTTTCTACAGCTTCGATGGCTAATCGAGAAAGAAGATGATCAACACACCAACAAACATAAAAATAATCATCAACATCATGGTTACCATCACCTTCCGCTTGCTTTGTCTTTCCACTCTTGTTGA ATGCCTGAGAGAAAGAAGATGAAGGTGAAGAAAGGATGGTTAGTTGTGGAAGTAGGGTTGGAAGAGGAAGATGAAAGAATAGAGAGATTTGTGGTTCCAATAGCCTATTTATATCACCCTTATTTCAAGAAGCTCTTGGACAAGGCTCAAGAAATCTATGGCTACCATGCCAACGGCCCGCTTCGGATTCCGTGCTCGGTCGATGACTTTCTACAGCTTCGATGGCTAATCGAGAAAGAAGATGATCAACACACCAACAAACATAAAAATAATCATCAACATCATGGTTACCATCACCTTCCGCTTGCTTTGTCTTTCCACTCTTGTTGA MPERKKMKVKKGWLVVEVGLEEEDERIERFVVPIAYLYHPYFKKLLDKAQEIYGYHANGPLRIPCSVDDFLQLRWLIEKEDDQHTNKHKNNHQHHGYHHLPLALSFHSC Homology
BLAST of Sed0008813 vs. NCBI nr
Match: KGN54862.1 (hypothetical protein Csa_012431 [Cucumis sativus]) HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43 Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Sed0008813 vs. NCBI nr
Match: XP_022154927.1 (auxin-responsive protein SAUR32-like [Momordica charantia]) HSP 1 Score: 177.2 bits (448), Expect = 7.8e-41 Identity = 88/112 (78.57%), Postives = 95/112 (84.82%), Query Frame = 0
BLAST of Sed0008813 vs. NCBI nr
Match: KAG6603262.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 86/115 (74.78%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of Sed0008813 vs. NCBI nr
Match: KAG6603263.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.5 bits (441), Expect = 5.1e-40 Identity = 85/113 (75.22%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of Sed0008813 vs. NCBI nr
Match: XP_002272614.1 (PREDICTED: auxin-responsive protein SAUR32-like [Vitis vinifera] >RVX21191.1 Auxin-responsive protein SAUR32 [Vitis vinifera]) HSP 1 Score: 157.1 bits (396), Expect = 8.4e-35 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.0e-11 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.7e-09 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-09 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy TrEMBL
Match: A0A0A0L2M8 (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_4G556180 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.2e-44 Identity = 89/113 (78.76%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy TrEMBL
Match: A0A6J1DN07 (auxin-responsive protein SAUR32-like OS=Momordica charantia OX=3673 GN=LOC111022073 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41 Identity = 88/112 (78.57%), Postives = 95/112 (84.82%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy TrEMBL
Match: A0A438KIZ8 (Auxin-responsive protein SAUR32 OS=Vitis vinifera OX=29760 GN=SAUR32_2 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.1e-35 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy TrEMBL
Match: A0A2P5ETC9 (Small auxin-up RNA OS=Trema orientale OX=63057 GN=TorRG33x02_153270 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.9e-35 Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Sed0008813 vs. ExPASy TrEMBL
Match: A0A2I4DN05 (auxin-induced protein 6B-like OS=Juglans regia OX=51240 GN=LOC108981711 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.0e-35 Identity = 74/109 (67.89%), Postives = 85/109 (77.98%), Query Frame = 0
BLAST of Sed0008813 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of Sed0008813 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 74.7 bits (182), Expect = 5.1e-14 Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0
BLAST of Sed0008813 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Sed0008813 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 65.5 bits (158), Expect = 3.1e-11 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Sed0008813 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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