Sed0008785 (gene) Chayote v1

Overview


Name	Sed0008785
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG02: 47039012 .. 47039759 (-)
RNA-Seq Expression	Sed0008785
Synteny	Sed0008785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTCCAAATCTCCATTAAACAGAAGACGAGAAACAGAGCAAAAAAGACCCGAACCCAACCAGTTGAATTTCTAAAATGGGGAAGACCAAAATTGTAAAGTTGTGAAGAAATTCAAAAACTCATAAGGAACTCTACGAATCAAAAACCAGCCAAATGAGAGCCCCATAGAAGAAATAACAACACTCAAGCCTCCAAAGCCATTTTCCAACAACAAAACCTCAAAAACAGAGAAACCCCAGAAACCAAACCGACGAAAACGAGTGATCAAAGGCAAAAACTGGAAAGTTTCAGGGACAAAACTCCATGAAACAGAAGAAGAGAAACACAGACAAGCACAAAAAGAGAGACCACAAGCAGTTGAATTGCTGGAATGGGGTGAAGAACAAAATTGTAATGTAGTGAAGAAGAAATTCAAAGAAATTGGAGGAATTGAAATGAAATATCCAATGAAAGAGAAAAAAGGCAAAAAACACAAGAAAAGGGATGCGGTTTTGTTGCTGCAAACTACAAAGGGCAGAAGGGCGAAGGACCCCATTGGCCGTCCTTGGCGACACAGAACAGAACAGAGCTCTCCTTCTTCCCGCCTTTTGAGAGAGACGATGTGGGTCCCACTGCCAAATCACTACTACTGTGGTTCTGCTGTTGAATCTTGTCCGTTGGTTTCTGGTCTGGAAGAGATCGTTGCCGTTCGTTGTGGTAATCTCTTGGAATTTGTGCTTGGTTTATGTTCTATTTTTTGCTAA

mRNA sequence

ATGAAGCCAAATGAGAGCCCCATAGAAGAAATAACAACACTCAAGCCTCCAAAGCCATTTTCCAACAACAAAACCTCAAAAACAGAGAAACCCCAGAAACCAAACCGACGAAAACGAGTGATCAAAGGCAAAAACTGGAAAGTTTCAGGGACAAAACTCCATGAAACAGAAGAAGAGAAACACAGACAAGCACAAAAAGAGAGACCACAAGCAGTTGAATTGCTGGAATGGGGTGAAGAACAAAATTGTAATGTAGTGAAGAAGAAATTCAAAGAAATTGGAGGAATTGAAATGAAATATCCAATGAAAGAGAAAAAAGGCAAAAAACACAAGAAAAGGGATGCGGTTTTGTTGCTGCAAACTACAAAGGGCAGAAGGGCGAAGGACCCCATTGGCCGTCCTTGGCGACACAGAACAGAACAGAGCTCTCCTTCTTCCCGCCTTTTGAGAGAGACGATGTGGGTCCCACTGCCAAATCACTACTACTGTGGTTCTGCTGTTGAATCTTGTCCGTTGGTTTCTGGTCTGGAAGAGATCGTTGCCGTTCGTTGTGGTAATCTCTTGGAATTTGTGCTTGGTTTATGTTCTATTTTTTGCTAA

Coding sequence (CDS)

ATGAAGCCAAATGAGAGCCCCATAGAAGAAATAACAACACTCAAGCCTCCAAAGCCATTTTCCAACAACAAAACCTCAAAAACAGAGAAACCCCAGAAACCAAACCGACGAAAACGAGTGATCAAAGGCAAAAACTGGAAAGTTTCAGGGACAAAACTCCATGAAACAGAAGAAGAGAAACACAGACAAGCACAAAAAGAGAGACCACAAGCAGTTGAATTGCTGGAATGGGGTGAAGAACAAAATTGTAATGTAGTGAAGAAGAAATTCAAAGAAATTGGAGGAATTGAAATGAAATATCCAATGAAAGAGAAAAAAGGCAAAAAACACAAGAAAAGGGATGCGGTTTTGTTGCTGCAAACTACAAAGGGCAGAAGGGCGAAGGACCCCATTGGCCGTCCTTGGCGACACAGAACAGAACAGAGCTCTCCTTCTTCCCGCCTTTTGAGAGAGACGATGTGGGTCCCACTGCCAAATCACTACTACTGTGGTTCTGCTGTTGAATCTTGTCCGTTGGTTTCTGGTCTGGAAGAGATCGTTGCCGTTCGTTGTGGTAATCTCTTGGAATTTGTGCTTGGTTTATGTTCTATTTTTTGCTAA

Protein sequence

MKPNESPIEEITTLKPPKPFSNNKTSKTEKPQKPNRRKRVIKGKNWKVSGTKLHETEEEKHRQAQKERPQAVELLEWGEEQNCNVVKKKFKEIGGIEMKYPMKEKKGKKHKKRDAVLLLQTTKGRRAKDPIGRPWRHRTEQSSPSSRLLRETMWVPLPNHYYCGSAVESCPLVSGLEEIVAVRCGNLLEFVLGLCSIFC

Homology

The following BLAST results are available for this feature:

BLAST of Sed0008785 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0008785 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0008785 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0008785 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008785.1	Sed0008785.1	mRNA