Sed0008743 (gene) Chayote v1

Overview


Name	Sed0008743
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor SHINE 2-like
Location	LG05: 30831780 .. 30833572 (-)
RNA-Seq Expression	Sed0008743
Synteny	Sed0008743

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAAAACCCCAATTCGACCAGTGGACACTCCACTATAAATGCGTGAAATTATTATTCTCTGGACGTTTTTCCAACTCCTTCACCTGTATTTTTGGTGTTTGATTCCATTGTTTGTATCTCTCTCTTATTTAAGGGGCTGAAATTTGTGGGTTTCTCTCTCTGGAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTGAGGCAGCGGCAGTGGGGTTCGTGGGTGTCAGAAATTCGCCACCCATTGCTGTAAATTCCCTTTTCAATTATTGTTTTTTGTTCTTCTGCTTTAAATTTATGCTTCGTTTGTTGGATTGAAATTGCTCTGTTGCACCCATTTTTCTGTCTGATGCGTTGTGAACATAACCTGTTTGTTGATTTGCCTTCAAGAAACTTTACGGCTATGGTGGCGTAGATTTGTGAACGGCATTGTTGTTGTTAATGTTTGTGTTTCTTGGTTCTAAATTGCTCTGAAACCCCATGTTTTGTTTTGTGCCCATAACTTGTTTGTTGATTTGCCTGAAATAAGCTGAGCAGCCATGGTTTTTTTTTTTTTTTGAAACAGCAGCCATTGTCATATATACATATATATATATATATAAACTTTATGTATATAAAATAATAATAGGAATGTTCATCTCAAAATCAATTGGCAACGGATTCTGCCTTTTTTTTTATAAAGTTTGTGATGTCTTTGTGCTTTTTGAATTTGGGATCCTCAATACAAGTCGATCTTGAATTTTATTCCAATTTCATTTTTATTGGATTGATTTTAATTTCCTTTTTTATTGGAGTGAATTCTCATTTGAGCTTAATTTAATGGAATTTAATACTATATTAGATAATTGGAGAGGAGTAACTCAGTTTTTTAAAAGGTAGTGTGAGGGATTTTCACTTTTCCAACATGGGATCATGAAGAATTTAGTTTATTGATCTTCTGGTGCAAATTTATGTGTTTTTGCTTGTATTTGTTGGTTAAAAAAAAGCCCTGGAAAGTAAAAGCTAATCTTTTTTCTTATGCCTTCAATCTGTTTGTTGATTTGCTCCAAAGAAGCTAAAAGTCATTTTTTAAGATTTGAAACTACATTACATCTTGAGCTCACATTCTTATAATTTTCATGTGTGTTTTTCTTTGTAGGAAGAGAAGGGTTTGGCTAGGAACATTCGATACAGCCGAGGATGCGGCACGAGCGTATGATCAAGCAGCCATCTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCCAAAGACCAATCTGAAGAAGCCAGCCACAGCCATAGAGCTTCTCCATTAGCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTTAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACTCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCTCTCGAGCAGCCTCCAGTTGGGTCATGAGGATTGAGCTAGAGAAGAAGGAGACGCCCTCGCCCTTGCCATCACCCGAATCGACGAGCCAGGAAGCTGATAGACATCAGAATGGAATTGATGAAGAAGACAGAATTGCAATTCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCCCTTCCTTCATCTTCAAGCTAAATGCGAGATCTCAACACAAAACTCAACTCTAAAAAATAAAAAAGAACCCATATGACCAAAACAATGTAGTTTAAATAATGTGTTTGACTGTGTATGTACGTATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA

mRNA sequence

TTCAAAAACCCCAATTCGACCAGTGGACACTCCACTATAAATGCGTGAAATTATTATTCTCTGGACGTTTTTCCAACTCCTTCACCTGTATTTTTGGTGTTTGATTCCATTGTTTGTATCTCTCTCTTATTTAAGGGGCTGAAATTTGTGGGTTTCTCTCTCTGGAGTTATGGTTTATTCGAGGAAGTTCAGAGGAGTGAGGCAGCGGCAGTGGGGTTCGTGGGTGTCAGAAATTCGCCACCCATTGCTGAAGAGAAGGGTTTGGCTAGGAACATTCGATACAGCCGAGGATGCGGCACGAGCGTATGATCAAGCAGCCATCTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCCAAAGACCAATCTGAAGAAGCCAGCCACAGCCATAGAGCTTCTCCATTAGCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTTAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACTCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCTCTCGAGCAGCCTCCAGTTGGGTCATGAGGATTGAGCTAGAGAAGAAGGAGACGCCCTCGCCCTTGCCATCACCCGAATCGACGAGCCAGGAAGCTGATAGACATCAGAATGGAATTGATGAAGAAGACAGAATTGCAATTCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCCCTTCCTTCATCTTCAAGCTAAATGCGAGATCTCAACACAAAACTCAACTCTAAAAAATAAAAAAGAACCCATATGACCAAAACAATGTAGTTTAAATAATGTGTTTGACTGTGTATGTACGTATGTATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATA

Coding sequence (CDS)

ATGGTTTATTCGAGGAAGTTCAGAGGAGTGAGGCAGCGGCAGTGGGGTTCGTGGGTGTCAGAAATTCGCCACCCATTGCTGAAGAGAAGGGTTTGGCTAGGAACATTCGATACAGCCGAGGATGCGGCACGAGCGTATGATCAAGCAGCCATCTTGATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCCAAAGACCAATCTGAAGAAGCCAGCCACAGCCATAGAGCTTCTCCATTAGCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTTAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTCGACAGCGACAACTCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCTCTCGAGCAGCCTCCAGTTGGGTCATGAGGATTGAGCTAGAGAAGAAGGAGACGCCCTCGCCCTTGCCATCACCCGAATCGACGAGCCAGGAAGCTGATAGACATCAGAATGGAATTGATGAAGAAGACAGAATTGCAATTCAAATGATTGAAGAGTTGCTCAATTGGAACTGCCCCCTTCCTTCATCTTCAAGCTAA

Protein sequence

MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVWQKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLNWNCPLPSSSS

Homology

[Close]

BLAST of Sed0008743 vs. NCBI nr
Match: XP_022936545.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936547.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936548.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936549.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 173/190 (91.05%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKDQS EASH H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 61  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQE D H+NGIDEEDRIA+QMIEELLN
Sbjct: 121 QKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLN 180

Query: 181 WNCPLPSSSS 191
           WNCPLPS SS
Sbjct: 181 WNCPLPSISS 190

[Close]

BLAST of Sed0008743 vs. NCBI nr
Match: XP_022936544.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 173/190 (91.05%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKDQS EASH H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 66  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 125

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQE D H+NGIDEEDRIA+QMIEELLN
Sbjct: 126 QKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLN 185

Query: 181 WNCPLPSSSS 191
           WNCPLPS SS
Sbjct: 186 WNCPLPSISS 195

[Close]

BLAST of Sed0008743 vs. NCBI nr
Match: KAG6591574.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93
Identity = 172/190 (90.53%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKDQS EASH H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 66  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 125

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAG+RA S+WVMRIEL KKE PSPLPSPESTS+E D H+NGIDEEDRIA+QMIEELLN
Sbjct: 126 QKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSEEPDGHRNGIDEEDRIAMQMIEELLN 185

Query: 181 WNCPLPSSSS 191
           WNCPLPS SS
Sbjct: 186 WNCPLPSISS 195

[Close]

BLAST of Sed0008743 vs. NCBI nr
Match: XP_022976202.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976203.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976204.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >XP_022976205.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 61  NFPASKDQSEEAS--HSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIG 120
           NFPASKDQS EAS  H H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 121 VWQKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEEL 180
           VWQKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQEAD H+NGIDEEDRIA+QMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 180

Query: 181 LNWNCPLPSSSS 191
           LNWNCPLPS SS
Sbjct: 181 LNWNCPLPSISS 192

[Close]

BLAST of Sed0008743 vs. NCBI nr
Match: XP_022976201.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65

Query: 61  NFPASKDQSEEAS--HSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIG 120
           NFPASKDQS EAS  H H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIG
Sbjct: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125

Query: 121 VWQKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEEL 180
           VWQKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQEAD H+NGIDEEDRIA+QMIEEL
Sbjct: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185

Query: 181 LNWNCPLPSSSS 191
           LNWNCPLPS SS
Sbjct: 186 LNWNCPLPSISS 197

[Close]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.8e-59
Identity = 118/189 (62.43%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPASKDQSEEASHSHRASPL-APKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGV 120
           NFP  K +          SPL +PK+LSELL+ KLRK CK+ +PSLTCLRLD+D+SHIGV
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV 120

Query: 121 WQKRAGSRAASSWVMRIELEKKETPSPLP------SPESTSQEADRHQNGIDEEDRIAIQ 180
           WQKRAGS+ + +WVMR+EL      S +       + ++  +E +  +  I +ED++A++
Sbjct: 121 WQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAME 180

Query: 181 MIEELLNWN 183
           MIEELLNW+
Sbjct: 181 MIEELLNWS 189

[Close]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.4e-58
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFP  K     +   + A   +PK+LSELL+ KLRK CK+ +P LTCLRLD+D+SHIGVW
Sbjct: 61  NFPVIKSNGSNSLEINSAL-RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAGS+ + +WV  +EL  K    P    E+   +       + E+D++A+QMIEELLN
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEELLN 180

Query: 181 WNCP 185
           W CP
Sbjct: 181 WTCP 181

[Close]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55
Identity = 111/199 (55.78%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPASKDQSEEASH--------SHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDS 120
           NFP + + + E S         S  +S  +  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 DNSHIGVWQKRAGSRAASSWVMRIEL---------EKKETPSPLPSPESTSQEADRHQNG 180
            +SHIGVWQKRAGS++ SSWVM +EL           K +   + +P +  +     +  
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 181 IDEEDRIAIQMIEELLNWN 183
           +DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22
Identity = 73/177 (41.24%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 64
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65  SKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVWQKRA 124
           + +    +S          K LS  L+ KL KC       +  L++          Q   
Sbjct: 66  NPNAIPTSS---------SKLLSATLTAKLHKC------YMASLQMTKQTQTQTQTQTAR 125

Query: 125 GSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLNW 182
              A S  V   E       +     +     A+  QN    E+    QMIEELL++
Sbjct: 126 SQSADSDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHY 167

[Close]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-20
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 64
          +++RG RQR WGSWVSEIRH +LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6  QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY 65

Query: 65 SKDQSEEASHSHRASPLAPKALSELLSTKLRKC 98
          + + S+ +S          K LS  L  KL +C
Sbjct: 66 NPNASQSSS---------SKLLSATLIAKLHRC 89

[Close]

BLAST of Sed0008743 vs. ExPASy TrEMBL
Match: A0A6J1FE03 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.7e-94
Identity = 173/190 (91.05%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKDQS EASH H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 61  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQE D H+NGIDEEDRIA+QMIEELLN
Sbjct: 121 QKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLN 180

Query: 181 WNCPLPSSSS 191
           WNCPLPS SS
Sbjct: 181 WNCPLPSISS 190

[Close]

BLAST of Sed0008743 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.7e-94
Identity = 173/190 (91.05%), Postives = 180/190 (94.74%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKDQS EASH H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 66  NFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 125

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQE D H+NGIDEEDRIA+QMIEELLN
Sbjct: 126 QKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLN 185

Query: 181 WNCPLPSSSS 191
           WNCPLPS SS
Sbjct: 186 WNCPLPSISS 195

[Close]

BLAST of Sed0008743 vs. ExPASy TrEMBL
Match: A0A6J1IIU8 (ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60

Query: 61  NFPASKDQSEEAS--HSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIG 120
           NFPASKDQS EAS  H H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIG
Sbjct: 61  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 120

Query: 121 VWQKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEEL 180
           VWQKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQEAD H+NGIDEEDRIA+QMIEEL
Sbjct: 121 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 180

Query: 181 LNWNCPLPSSSS 191
           LNWNCPLPS SS
Sbjct: 181 LNWNCPLPSISS 192

[Close]

BLAST of Sed0008743 vs. ExPASy TrEMBL
Match: A0A6J1IGA2 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476664 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT
Sbjct: 6   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 65

Query: 61  NFPASKDQSEEAS--HSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIG 120
           NFPASKDQS EAS  H H +SP+ PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIG
Sbjct: 66  NFPASKDQSAEASHGHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIG 125

Query: 121 VWQKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEEL 180
           VWQKRAG+RA S+WVMRIEL KKE PSPLPSPESTSQEAD H+NGIDEEDRIA+QMIEEL
Sbjct: 126 VWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEADGHRNGIDEEDRIAMQMIEEL 185

Query: 181 LNWNCPLPSSSS 191
           LNWNCPLPS SS
Sbjct: 186 LNWNCPLPSISS 197

[Close]

BLAST of Sed0008743 vs. ExPASy TrEMBL
Match: A0A6J1FNE0 (ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445833 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.5e-90
Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQA+ILMNGQNAKT
Sbjct: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQASILMNGQNAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFPASKD+SEEASH H ASPL+PKALSELLSTKLRKCCKNPSPSLTCLRLDSDN+HIGVW
Sbjct: 61  NFPASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSP----LPSPESTSQEADRHQNGIDEEDRIAIQMIE 180
           QKRAG+RAAS WVMRIEL KKETP P     P PE  SQEA+  QNGIDEEDRIA+QMIE
Sbjct: 121 QKRAGTRAASDWVMRIELGKKETPPPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIE 180

Query: 181 ELLNWNCPLPSSSS 191
           ELL+WNCPLPS+SS
Sbjct: 181 ELLSWNCPLPSTSS 194

[Close]

BLAST of Sed0008743 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-60
Identity = 118/189 (62.43%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPASKDQSEEASHSHRASPL-APKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGV 120
           NFP  K +          SPL +PK+LSELL+ KLRK CK+ +PSLTCLRLD+D+SHIGV
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGV 120

Query: 121 WQKRAGSRAASSWVMRIELEKKETPSPLP------SPESTSQEADRHQNGIDEEDRIAIQ 180
           WQKRAGS+ + +WVMR+EL      S +       + ++  +E +  +  I +ED++A++
Sbjct: 121 WQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAME 180

Query: 181 MIEELLNWN 183
           MIEELLNW+
Sbjct: 181 MIEELLNWS 189

[Close]

BLAST of Sed0008743 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-59
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFP  K     +   + A   +PK+LSELL+ KLRK CK+ +P LTCLRLD+D+SHIGVW
Sbjct: 61  NFPVIKSNGSNSLEINSAL-RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAGS+ + +WV  +EL  K    P    E+   +       + E+D++A+QMIEELLN
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEELLN 180

Query: 181 WNCP 185
           W CP
Sbjct: 181 WTCP 181

[Close]

BLAST of Sed0008743 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 111/199 (55.78%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPASKDQSEEASH--------SHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDS 120
           NFP + + + E S         S  +S  +  +LS +LS KLRKCCK+PSPSLTCLRLD+
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 DNSHIGVWQKRAGSRAASSWVMRIEL---------EKKETPSPLPSPESTSQEADRHQNG 180
            +SHIGVWQKRAGS++ SSWVM +EL           K +   + +P +  +     +  
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEV 180

Query: 181 IDEEDRIAIQMIEELLNWN 183
           +DEE+++A+QMIEELLN N
Sbjct: 181 LDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Sed0008743 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 215.3 bits (547), Expect = 4.2e-56
Identity = 112/184 (60.87%), Postives = 136/184 (73.91%), Query Frame = 0


Query: 1   MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKT 60
           MV+S+KFRGVRQRQWGSWVSEIRHPLL   VWLGTFDTAE AARAYDQAA+LMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPASKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVW 120
           NFP  K     +   + A   +PK+LSELL+ KLRK CK+ +P LTCLRLD+D+SHIGVW
Sbjct: 61  NFPVIKSNGSNSLEINSAL-RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 QKRAGSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLN 180
           QKRAGS+ + +WV  +EL  K    P    E+   +       + E+D++A+QMIEELLN
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKV--RNEDVQEDDQMAMQMIEELLN 178

Query: 181 WNCP 185
           W CP
Sbjct: 181 WTCP 178

[Close]

BLAST of Sed0008743 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 73/177 (41.24%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPA 64
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65  SKDQSEEASHSHRASPLAPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNSHIGVWQKRA 124
           + +    +S          K LS  L+ KL KC       +  L++          Q   
Sbjct: 66  NPNAIPTSS---------SKLLSATLTAKLHKC------YMASLQMTKQTQTQTQTQTAR 125

Query: 125 GSRAASSWVMRIELEKKETPSPLPSPESTSQEADRHQNGIDEEDRIAIQMIEELLNW 182
              A S  V   E       +     +     A+  QN    E+    QMIEELL++
Sbjct: 126 SQSADSDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHY 167

The following BLAST results are available for this feature:

BLAST of Sed0008743 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936545.1	1.4e-93	91.05	ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata]...	[more]
XP_022936544.1	1.4e-93	91.05	ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata]	[more]
KAG6591574.1	3.1e-93	90.53	Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperm...	[more]
XP_022976202.1	1.2e-92	90.63	ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima] >...	[more]
XP_022976201.1	1.2e-92	90.63	ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0008743 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFN7	8.8e-59	62.43	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	3.4e-58	62.50	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9XI33	1.6e-55	55.78	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AW5	1.7e-22	41.24	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	8.1e-20	53.76	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of Sed0008743 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE03	6.7e-94	91.05	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1F8L5	6.7e-94	91.05	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1IIU8	5.7e-93	90.63	ethylene-responsive transcription factor SHINE 2 isoform X2 OS=Cucurbita maxima ...	[more]
A0A6J1IGA2	5.7e-93	90.63	ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1FNE0	4.5e-90	87.63	ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita mo...	[more]

BLAST of Sed0008743 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11190.1	6.3e-60	62.43	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.4e-59	62.50	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	1.1e-56	55.78	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	4.2e-56	60.87	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	1.2e-23	41.24	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 7..18 score: 60.91 coord: 29..45 score: 72.19
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 7.4E-40 score: 148.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..55 e-value: 3.7E-13 score: 49.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.904358
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..65 e-value: 3.22248E-34 score: 113.906
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 4.8E-27 score: 95.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..82
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..188
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 1..188
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008743.1	Sed0008743.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity