Sed0008731 (gene) Chayote v1

Overview


Name	Sed0008731
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SPIRAL1-like 5
Location	LG07: 13551633 .. 13553333 (+)
RNA-Seq Expression	Sed0008731
Synteny	Sed0008731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACTTCACACTCATATAGGGAAATTCATTTTATATATATATAAAAACAACCAAGATTAGGGTTTGGAGCAGTTTGTTTTGTGTAGCATTTTTGGATCAGATCTAGTCAGAAAACCAGTATATGATGAGCAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTGGGGTATCTTTTTGGTAATGATGATCAGCCCATAAAGCCTCATGTCCCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATATCACTCCTGATCATCATCATCAAAACAATCCTAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCATGGCCAAAACTCTGGCAACTTCATAACGGTAAAGGGATTATTAATTCTATATATGCTCTTTTTCTTCAATCTCTTCGGATCTGATTCTCTTCTATGTTCGCTTTTAATTTGGATGAATTTCAAATTCGGAATCTGTATTCGGCTCCTCTTGAGCATTTCTCTATGTTTCTTATCGCTTGATTACGTTACCTACTTGCTTTGATTACTTCTAAGAATGAAAAGACAATTATTACGAACTAATACGTGTTCTTTAACGTATTTTGTTCTCACTTGCATGTTTTTTAGGAATTTTTTAAGAGATCGCCTATAGGATTGTCTCAAGTTAAACACTCTCAACTTTAGAGTTTCTATTATTCAAATTAATACTCAAAAGAAAGACGTATCTCGTTGGTATAGAGCTATGAACGGTCAATTATTTTGAGTTTTTCTTAACCATAACTATTTTGGGGTAGTCTAGTGGTCAAGACAGGCTTAGAGAACCCAACAAGAGCAGTAACTCGACGGCATTAGTGTACACCCAACGACAAGTTCAATTCTCCCACCCCTAATTGTTGCCAAAAAATGACTAAATCTCAACGAAAGTAAGAACCCTAATTGTCTACTACTTAATTACAAATTAATCACCTACCGAAGTAATAGATTCAATTCATGGTTACTACTTAATTACGAATTAATCTCCTACGGATTTCCTTAACGTCCTAGATGTTGTAGGGTTAGGTAATATATCTCATGATAGTAGTTTAGGTAAACCTAATTTCGTCCAGACAATCACAAATATAAAAAAATAATAATAATAATAATAAATAATCCATGACTTGCACATCTTTAAGATCTTTCTCATTCATTATGATCATTCATTAAACTCAAATGTTACAAAAGTAGAAAGTTGCGTGGTCAATACCTACTCTTTAGTATGTTCTTTGAGTGATTTTAAATCTTGATGGTTGGATCTTCCACGATCTCACCTCTTCTTTTAGATGAATAAATACTTCAATTACCTTCATTCAGATGAAATTCAAATTCAAATTGTAGGATTTAAAATCATTTCTTGAAAATTGTTAATGATACCTGTGTATATATATTTGTGATGAATCAGGACCGTCCATCAACCAAGGTGAAATCTGCTCCTGGTGGTGATTCATCCTTAGGGTATCTGTTTGGAGATAAGTGATTGTGATTAGTTTGTTTTCAATGCTGAATATATTGGAAGTGAGTTCTAAAGGGTATGCTTTAGTGTGTGTGGTTTTCTAAATAAATGTGTGCAATTATTATGTATCTTAAGAAACATATAGCCTGGATTTGTGCAAACAGTATGATATGCTTTAATTTTAGCAGATATTATAATGTATTGAATAGAATCATGAACTTGTAGTTTGATTATG

mRNA sequence

CACACTTCACACTCATATAGGGAAATTCATTTTATATATATATAAAAACAACCAAGATTAGGGTTTGGAGCAGTTTGTTTTGTGTAGCATTTTTGGATCAGATCTAGTCAGAAAACCAGTATATGATGAGCAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTGGGGTATCTTTTTGGTAATGATGATCAGCCCATAAAGCCTCATGTCCCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATATCACTCCTGATCATCATCATCAAAACAATCCTAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCATGGCCAAAACTCTGGCAACTTCATAACGGACCGTCCATCAACCAAGGTGAAATCTGCTCCTGGTGGTGATTCATCCTTAGGGTATCTGTTTGGAGATAAGTGATTGTGATTAGTTTGTTTTCAATGCTGAATATATTGGAAGTGAGTTCTAAAGGGTATGCTTTAGTGTGTGTGGTTTTCTAAATAAATGTGTGCAATTATTATGTATCTTAAGAAACATATAGCCTGGATTTGTGCAAACAGTATGATATGCTTTAATTTTAGCAGATATTATAATGTATTGAATAGAATCATGAACTTGTAGTTTGATTATG

Coding sequence (CDS)

ATGATGAGCAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTGGGGTATCTTTTTGGTAATGATGATCAGCCCATAAAGCCTCATGTCCCCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATATCACTCCTGATCATCATCATCAAAACAATCCTAAACAACTTGTTTCCAACAATAATTATCCTCGAGCTCATGGCCAAAACTCTGGCAACTTCATAACGGACCGTCCATCAACCAAGGTGAAATCTGCTCCTGGTGGTGATTCATCCTTAGGGTATCTGTTTGGAGATAAGTGA

Protein sequence

MMSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

Homology

[Close]

BLAST of Sed0008731 vs. NCBI nr
Match: XP_008452039.1 (PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa] >TYK16640.1 protein SPIRAL1-like 5 [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-41
Identity = 88/102 (86.27%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLV 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

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BLAST of Sed0008731 vs. NCBI nr
Match: XP_004146520.1 (protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_015032 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVS 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD H+ N   +PKQLVS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 99
           NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Sed0008731 vs. NCBI nr
Match: XP_038883008.1 (protein SPIRAL1-like 5 [Benincasa hispida])

HSP 1 Score: 170.6 bits (431), Expect = 6.6e-39
Identity = 87/102 (85.29%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLV 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD ++ NN    PKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDNNNNNPSPSPKQLV 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  S-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 101

[Close]

BLAST of Sed0008731 vs. NCBI nr
Match: XP_022136791.1 (protein SPIRAL1-like 5 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 7.4e-38
Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVS 61
           MSRGGSYGGGRSSLGYLFGNDDQP KP V +V+LPPPYGIDI+PD    N   +PKQLVS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
            NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  -NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of Sed0008731 vs. NCBI nr
Match: XP_022941576.1 (protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like 5 [Cucurbita maxima] >XP_023545276.1 protein SPIRAL1-like 5 [Cucurbita pepo subsp. pepo] >KAG6600565.1 Protein SPIRAL1-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031205.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-37
Identity = 83/101 (82.18%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVS 61
           MSRGGSYGGGRSSLGYLFGNDD+P KP V KVVLPPPYGIDI PD   QNNP    +  +
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPD--DQNNPSPSPKQAA 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           +NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  SNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot
Match: Q8LGD1 (Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-28
Identity = 65/102 (63.73%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLV 61
           MSRGGS+GGG+SSLGYLFG+D++    P  P  PK    PPYG+D T +  H+ + K  +
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPA--PPYGVDST-EEDHEADQKPKI 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-18
Identity = 58/114 (50.88%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQP---IKPHVPKVVLPPPYGIDIT--------PDHHHQ 61
           MSRGGS GGG+SSLGYLFG ++ P    KP       P P              P     
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 62  NNPKQLV-------SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
           +  KQ+        SNNNY RA GQN+GNF+TDRPSTKV +APGG SSLGYLFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-17
Identity = 57/109 (52.29%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPK 61
           M RG S GGG+SSLGYLFG+ + P KP +     P     P   D +P H      N  K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISADPSPKHVAAQTVNVTK 60

Query: 62  QL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
           Q+       S NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 56/106 (52.83%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNP 61
           M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 62  KQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
             L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.0e-15
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 2  MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLVSN-- 61
          M RG S GGG+SSLGYLFG  + P     P  V  P      +     +  P  + S+  
Sbjct: 1  MGRGVSSGGGQSSLGYLFGGGEAPKSAEKPAPVQKP---APSSSAEKLKEIPAGIQSSKA 60

Query: 62 NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF 97
          NNY RA GQN GNF+TDRPSTKV++APGG SSL YLF
Sbjct: 61 NNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLF 94

[Close]

BLAST of Sed0008731 vs. ExPASy TrEMBL
Match: A0A5D3CZ49 (Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004680 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41
Identity = 88/102 (86.27%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLV 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Sed0008731 vs. ExPASy TrEMBL
Match: A0A1S3BTQ0 (protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41
Identity = 88/102 (86.27%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNN----PKQLV 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD  H NN    PKQLV
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDDHHNNPSPSPKQLV 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           S NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
Sbjct: 61  SKNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 102

[Close]

BLAST of Sed0008731 vs. ExPASy TrEMBL
Match: A0A0A0KUV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41
Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVS 61
           MSRGGSYGGGRSSLGYLFG DDQP KP V KVVLPPPYGID+ PD H+ N   +PKQLVS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVS 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 99
           NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Sbjct: 61  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD 100

[Close]

BLAST of Sed0008731 vs. ExPASy TrEMBL
Match: A0A6J1C4I1 (protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.6e-38
Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQN---NPKQLVS 61
           MSRGGSYGGGRSSLGYLFGNDDQP KP V +V+LPPPYGIDI+PD    N   +PKQLVS
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSRVILPPPYGIDISPDDQSNNPSPSPKQLVS 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
            NNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Sbjct: 61  -NNYPRAHGQNSGNFLTDRPSTKVKSAPGXDSSLGYLFGDK 100

[Close]

BLAST of Sed0008731 vs. ExPASy TrEMBL
Match: A0A6J1J7K0 (protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.0e-37
Identity = 83/101 (82.18%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPPPYGIDITPDHHHQNNPK---QLVS 61
           MSRGGSYGGGRSSLGYLFGNDD+P KP V KVVLPPPYGIDI PD   QNNP    +  +
Sbjct: 1   MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPD--DQNNPSPSPKQAA 60

Query: 62  NNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           +NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Sbjct: 61  SNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK 99

[Close]

BLAST of Sed0008731 vs. TAIR 10
Match: AT4G23496.1 (SPIRAL1-like5 )

HSP 1 Score: 125.2 bits (313), Expect = 3.0e-29
Identity = 65/102 (63.73%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQ----PIKPHVPKVVLPPPYGIDITPDHHHQNNPKQLV 61
           MSRGGS+GGG+SSLGYLFG+D++    P  P  PK    PPYG+D T +  H+ + K  +
Sbjct: 1   MSRGGSFGGGQSSLGYLFGSDNEIPKTPAPPVAPKPA--PPYGVDST-EEDHEADQKPKI 60

Query: 62  SNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK 100
           SNNNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLFGDK
Sbjct: 61  SNNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

[Close]

BLAST of Sed0008731 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-18
Identity = 57/109 (52.29%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVVLPP----PYGIDITPDH---HHQNNPK 61
           M RG S GGG+SSLGYLFG+ + P KP +     P     P   D +P H      N  K
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAP-KPAINNAPAPSSETLPISADPSPKHVAAQTVNVTK 60

Query: 62  QL------VSNNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
           Q+       S NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLFG
Sbjct: 61  QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

[Close]

BLAST of Sed0008731 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17
Identity = 56/106 (52.83%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNP 61
           M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 62  KQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
             L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Sed0008731 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17
Identity = 56/106 (52.83%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKPHVPKVV--------LPPPYGIDITPDHHHQNNP 61
           M RG S GGG+SSLGYLFG+ + P    V K           PP            +  P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 62  KQLVSN--NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG 98
             L SN  NNY RA GQN+GNFITDRPSTKV SAPGG SSL YLFG
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

[Close]

BLAST of Sed0008731 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 75.1 bits (183), Expect = 3.5e-14
Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 2   MSRGGSYGGGRSSLGYLFGNDDQPIKP-HVPKVV--------LPPPYGIDIT-------- 61
           M RG S GGG+SSL YLFG D    KP   P+           PP   +  T        
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 62  --PDHHHQNNPKQLVSN-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF 97
             P   ++  P  + +  NNY RA GQN+GNF+TDRPSTKV +APGG SSL YLF
Sbjct: 61  VEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLF 115

The following BLAST results are available for this feature:

BLAST of Sed0008731 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452039.1	9.3e-41	86.27	PREDICTED: protein SPIRAL1-like 5 [Cucumis melo] >KAA0044824.1 protein SPIRAL1-l...	[more]
XP_004146520.1	1.6e-40	87.00	protein SPIRAL1-like 5 [Cucumis sativus] >KGN53333.1 hypothetical protein Csa_01...	[more]
XP_038883008.1	6.6e-39	85.29	protein SPIRAL1-like 5 [Benincasa hispida]	[more]
XP_022136791.1	7.4e-38	83.17	protein SPIRAL1-like 5 [Momordica charantia]	[more]
XP_022941576.1	6.2e-37	82.18	protein SPIRAL1-like 5 [Cucurbita moschata] >XP_022983494.1 protein SPIRAL1-like...	[more]

BLAST of Sed0008731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD1	4.2e-28	63.73	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana OX=3702 GN=SP1L5 PE=2 SV=1	[more]
Q7Y1L9	6.7e-18	50.88	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
B3H4F1	4.4e-17	52.29	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	3.7e-16	52.83	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q2QQ99	7.0e-15	51.55	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]

BLAST of Sed0008731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ49	4.5e-41	86.27	Protein SPIRAL1-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3BTQ0	4.5e-41	86.27	protein SPIRAL1-like 5 OS=Cucumis melo OX=3656 GN=LOC103493166 PE=3 SV=1	[more]
A0A0A0KUV0	7.7e-41	87.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047940 PE=3 SV=1	[more]
A0A6J1C4I1	3.6e-38	83.17	protein SPIRAL1-like 5 OS=Momordica charantia OX=3673 GN=LOC111008404 PE=3 SV=1	[more]
A0A6J1J7K0	3.0e-37	82.18	protein SPIRAL1-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111482082 PE=3 SV=1	[more]

BLAST of Sed0008731 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23496.1	3.0e-29	63.73	SPIRAL1-like5	[more]
AT1G26355.1	3.1e-18	52.29	SPIRAL1-like1	[more]
AT1G69230.1	2.6e-17	52.83	SPIRAL1-like2	[more]
AT1G69230.2	2.6e-17	52.83	SPIRAL1-like2	[more]
AT2G03680.1	3.5e-14	45.22	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..99
None	No IPR available	PANTHER	PTHR33403:SF19	PROTEIN SPIRAL1-LIKE 5	coord: 2..99
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 2..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008731.1	Sed0008731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis