Sed0008712 (gene) Chayote v1

Overview


Name	Sed0008712
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like
Location	LG11: 24204135 .. 24204667 (+)
RNA-Seq Expression	Sed0008712
Synteny	Sed0008712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTTCTATCAAAAACCCTAAGCCAAAACAAGATGGACAACCTTCACAATATACTCCAAAGGCCTCTTTCCGCAAAGGAAGCTGAAGATGTGCTCAGGCTGCGTGATACCAACAACGATGGGGTCATTGATAAGAGAGAGCTGATGAGAGACTTGAGGCCCTCCAAACTACAACTCTCTCGTGAGGAGATCAAAGAAATTTTCCTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTAAACGAGGTAACCAAGGCTTTCAGTAGTTTGGGCGCCCTCCTACCGATGTATAAAGCTAATCACGGCATGAATTTTGCTGATGATGATGGTGATAATCTCATTAGCGAGGAGGAACTCGAAAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTCTAAAGAGAGGGCCTCGTTGAGTGTTGTTTAATACGTATGGTGATATAATAAAAGTGGTCGACTTACTATCTAGTATCTAATCTGCTGTCTTTGCTTTTTTCAATTCAAATATAGACAAGAAAAATTTCCA

mRNA sequence

CAACTTCTATCAAAAACCCTAAGCCAAAACAAGATGGACAACCTTCACAATATACTCCAAAGGCCTCTTTCCGCAAAGGAAGCTGAAGATGTGCTCAGGCTGCGTGATACCAACAACGATGGGGTCATTGATAAGAGAGAGCTGATGAGAGACTTGAGGCCCTCCAAACTACAACTCTCTCGTGAGGAGATCAAAGAAATTTTCCTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTAAACGAGGTAACCAAGGCTTTCAGTAGTTTGGGCGCCCTCCTACCGATGTATAAAGCTAATCACGGCATGAATTTTGCTGATGATGATGGTGATAATCTCATTAGCGAGGAGGAACTCGAAAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTCTAAAGAGAGGGCCTCGTTGAGTGTTGTTTAATACGTATGGTGATATAATAAAAGTGGTCGACTTACTATCTAGTATCTAATCTGCTGTCTTTGCTTTTTTCAATTCAAATATAGACAAGAAAAATTTCCA

Coding sequence (CDS)

ATGGACAACCTTCACAATATACTCCAAAGGCCTCTTTCCGCAAAGGAAGCTGAAGATGTGCTCAGGCTGCGTGATACCAACAACGATGGGGTCATTGATAAGAGAGAGCTGATGAGAGACTTGAGGCCCTCCAAACTACAACTCTCTCGTGAGGAGATCAAAGAAATTTTCCTCGAGCACGACATTGATGGCGATGGTTATCTCAATTTAAACGAGGTAACCAAGGCTTTCAGTAGTTTGGGCGCCCTCCTACCGATGTATAAAGCTAATCACGGCATGAATTTTGCTGATGATGATGGTGATAATCTCATTAGCGAGGAGGAACTCGAAAAACTCATCGATTATTTTGAGAAAACTAACAAGAAGGGTCTAAAGAGAGGGCCTCGTTGA

Protein sequence

MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEKTNKKGLKRGPR

Homology

[Close]

BLAST of Sed0008712 vs. NCBI nr
Match: XP_022951882.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 8.4e-42
Identity = 89/126 (70.63%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEH 60
           M+++  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+REEIKEIFLEH
Sbjct: 1   MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEH 60

Query: 61  DIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEKTN 120
           DIDGDG L++ EVTKAF+ +G+ L  +KA HG+  AD DGD +ISEEEL+KL+DYFEKTN
Sbjct: 61  DIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDYFEKTN 120

Query: 121 KKGLKR 127
           KK LKR
Sbjct: 121 KKCLKR 126

[Close]

BLAST of Sed0008712 vs. NCBI nr
Match: XP_023002890.1 (probable calcium-binding protein CML15 [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 89/126 (70.63%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEH 60
           M++L  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+RE+IKEIFLEH
Sbjct: 1   MESLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREQIKEIFLEH 60

Query: 61  DIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEKTN 120
           DIDGDG L+++E++KAF+ +G+ L  +KA HGM  AD DGD LISEEEL+KL+DYFEKTN
Sbjct: 61  DIDGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDYFEKTN 120

Query: 121 KKGLKR 127
           KK LKR
Sbjct: 121 KKCLKR 126

[Close]

BLAST of Sed0008712 vs. NCBI nr
Match: XP_038885760.1 (probable calcium-binding protein CML36 [Benincasa hispida])

HSP 1 Score: 137.5 bits (345), Expect = 8.1e-29
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RP----SKLQLSREEIKEIFL 67
           LQRPLS KEA  VL +RD N DGV+DK+ELM DL     +P      + L+REEI+EIF 
Sbjct: 8   LQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIREIFT 67

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 125
             DIDGDG+LN NE+T+AF  +G+  P++KA++ M  ADDDGD LISE EL KLIDY EK
Sbjct: 68  GFDIDGDGFLNKNELTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDYVEK 127

[Close]

BLAST of Sed0008712 vs. NCBI nr
Match: KAA0060891.1 (putative calcium-binding protein CML36 [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 6.4e-26
Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFL 67
           LQ+PLS KEA  VL++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+
Sbjct: 10  LQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTREEIKEIFV 69

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 123
             DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+DGD LISE EL KLIDY ++
Sbjct: 70  GFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDYVQR 129

[Close]

BLAST of Sed0008712 vs. NCBI nr
Match: XP_008445562.1 (PREDICTED: probable calcium-binding protein CML36 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-25
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFL 67
           LQ+PLS KEA  V ++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+
Sbjct: 10  LQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREEIKEIFV 69

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 123
             DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+DGD LISE EL KLIDY ++
Sbjct: 70  GFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDYVQR 129

[Close]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-08
Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = 0


Query: 13  SAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDIDGDGYLNLN 72
           +A E +D++   D + +G ID  E +  + R  K   + EE++E F   D DG+GY+ + 
Sbjct: 46  TAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVE 105

Query: 73  EVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           E+T   +SLG  L   +    +  AD DGD +I+ EE  ++I
Sbjct: 106 ELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147

[Close]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   D + DG ID  E +  + R  K   S EEI+E F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           DGDG+++  E+    ++LG  L   + +  +  AD DGD  ++ EE  K++
Sbjct: 97  DGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMM 146

[Close]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot
Match: P84339 (Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P S  E ED++   D + +G ID  E +  + R  +   S EEIKE F   D 
Sbjct: 37  MRSLGQNP-SQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDK 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           DG+GY++  E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMM 146

[Close]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot
Match: P62203 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   DT+ +G ID  E +  + R  K   + EE+ E F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDR 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           DGDGY++ +E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146

[Close]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot
Match: P24044 (Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   DT+ +G ID  E +  + R  K   + EE+ E F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDR 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           DGDGY++ +E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146

[Close]

BLAST of Sed0008712 vs. ExPASy TrEMBL
Match: A0A6J1GIW2 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111454618 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42
Identity = 89/126 (70.63%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEH 60
           M+++  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+REEIKEIFLEH
Sbjct: 1   MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEH 60

Query: 61  DIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEKTN 120
           DIDGDG L++ EVTKAF+ +G+ L  +KA HG+  AD DGD +ISEEEL+KL+DYFEKTN
Sbjct: 61  DIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDYFEKTN 120

Query: 121 KKGLKR 127
           KK LKR
Sbjct: 121 KKCLKR 126

[Close]

BLAST of Sed0008712 vs. ExPASy TrEMBL
Match: A0A6J1KQ84 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111496628 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42
Identity = 89/126 (70.63%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MDNLHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLSREEIKEIFLEH 60
           M++L  ILQRPLS KEA+ VL+LRDTN DGV++K+ELM DLRPSKLQL+RE+IKEIFLEH
Sbjct: 1   MESLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREQIKEIFLEH 60

Query: 61  DIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEKTN 120
           DIDGDG L+++E++KAF+ +G+ L  +KA HGM  AD DGD LISEEEL+KL+DYFEKTN
Sbjct: 61  DIDGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDYFEKTN 120

Query: 121 KKGLKR 127
           KK LKR
Sbjct: 121 KKCLKR 126

[Close]

BLAST of Sed0008712 vs. ExPASy TrEMBL
Match: A0A5A7V530 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00240 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-26
Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFL 67
           LQ+PLS KEA  VL++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+
Sbjct: 10  LQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTREEIKEIFV 69

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 123
             DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+DGD LISE EL KLIDY ++
Sbjct: 70  GFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDYVQR 129

[Close]

BLAST of Sed0008712 vs. ExPASy TrEMBL
Match: A0A1S3BD12 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 9.1e-26
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFL 67
           LQ+PLS KEA  V ++RD N DG++DK+ELM DL     +PS     ++L+REEIKEIF+
Sbjct: 10  LQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREEIKEIFV 69

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 123
             DIDGDG+L+ NEV +AF  +G+  P+ K ++ M  AD+DGD LISE EL KLIDY ++
Sbjct: 70  GFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLIDYVQR 129

[Close]

BLAST of Sed0008712 vs. ExPASy TrEMBL
Match: A0A0A0LP46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.9e-25
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 8   LQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-----RPS----KLQLSREEIKEIFL 67
           LQ+PLS KEA  +L +RD N DGV+DK+ELM DL     +PS     ++L+REEIKEIF+
Sbjct: 10  LQKPLSEKEANLLLEMRDANGDGVLDKQELMADLTHTNKKPSTSLQDMKLTREEIKEIFV 69

Query: 68  EHDIDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLIDYFEK 120
             DIDGDG+L+ NEV +AF  +G+  P+ KA++ M  AD+DGD  ISE EL KLIDY ++
Sbjct: 70  GFDIDGDGFLSKNEVIQAFGMMGSCSPIMKAHYAMACADEDGDGRISEPELNKLIDYVQR 129

[Close]

BLAST of Sed0008712 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 49.3 bits (116), Expect = 2.7e-06
Identity = 33/112 (29.46%), Postives = 62/112 (55.36%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDLRPSKLQLS--REEIKEIFLEHD 63
           + ++ Q P + +E  D++   D++++G I+  E + +L   KLQ S   EE+KE F   D
Sbjct: 38  IRSLDQNP-TEQELHDIITEIDSDSNGTIEFAEFL-NLMAKKLQESDAEEELKEAFKVFD 97

Query: 64  IDGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
            D +GY++ +E++    +LG  L   +    +  AD DGD  ++ +E  K++
Sbjct: 98  KDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDEFVKMM 147

[Close]

BLAST of Sed0008712 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           D +G+++  E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Sed0008712 vs. TAIR 10
Match: AT2G27030.1 (calmodulin 5 )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           D +G+++  E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Sed0008712 vs. TAIR 10
Match: AT2G27030.3 (calmodulin 5 )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D 
Sbjct: 37  MRSLGQNPTEA-ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 96

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           D +G+++  E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 97  DQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Sed0008712 vs. TAIR 10
Match: AT2G27030.2 (calmodulin 5 )

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 4   LHNILQRPLSAKEAEDVLRLRDTNNDGVIDKRELMRDL-RPSKLQLSREEIKEIFLEHDI 63
           + ++ Q P  A E +D++   D + +G ID  E +  + R  K   S EE+KE F   D 
Sbjct: 1   MRSLGQNPTEA-ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 60

Query: 64  DGDGYLNLNEVTKAFSSLGALLPMYKANHGMNFADDDGDNLISEEELEKLI 114
           D +G+++  E+    ++LG  L   + +  +  AD DGD  I+ EE  K++
Sbjct: 61  DQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVM 110

The following BLAST results are available for this feature:

BLAST of Sed0008712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951882.1	8.4e-42	70.63	probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 prob...	[more]
XP_023002890.1	1.1e-41	70.63	probable calcium-binding protein CML15 [Cucurbita maxima]	[more]
XP_038885760.1	8.1e-29	57.94	probable calcium-binding protein CML36 [Benincasa hispida]	[more]
KAA0060891.1	6.4e-26	54.03	putative calcium-binding protein CML36 [Cucumis melo var. makuwa]	[more]
XP_008445562.1	1.9e-25	53.23	PREDICTED: probable calcium-binding protein CML36 [Cucumis melo]	[more]

BLAST of Sed0008712 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05933	6.3e-08	33.33	Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c...	[more]
P62184	7.0e-07	32.43	Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2	[more]
P84339	1.5e-06	33.33	Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2	[more]
P62203	1.5e-06	32.43	Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=...	[more]
P24044	1.5e-06	32.43	Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4	[more]

BLAST of Sed0008712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIW2	4.1e-42	70.63	probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KQ84	5.3e-42	70.63	probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114966...	[more]
A0A5A7V530	3.1e-26	54.03	Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BD12	9.1e-26	53.23	probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 P...	[more]
A0A0A0LP46	5.9e-25	54.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1	[more]

BLAST of Sed0008712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14640.1	2.7e-06	29.46	calmodulin 8	[more]
AT2G41110.1	4.6e-06	30.63	calmodulin 2	[more]
AT2G27030.1	4.6e-06	30.63	calmodulin 5	[more]
AT2G27030.3	4.6e-06	30.63	calmodulin 5	[more]
AT2G27030.2	4.6e-06	30.63	calmodulin 5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 88..116 e-value: 57.0 score: 3.6 coord: 16..44 e-value: 2.6 score: 14.4 coord: 52..80 e-value: 3.5E-4 score: 29.9
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 94..112 e-value: 0.017 score: 14.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 19..77 e-value: 2.7E-9 score: 37.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 12..47 score: 9.910664
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 48..83 score: 13.732334
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 16..78 e-value: 6.60281E-12 score: 54.8613
None	No IPR available	GENE3D	1.10.238.10		coord: 66..126 e-value: 1.2E-6 score: 30.3
None	No IPR available	GENE3D	1.10.238.10		coord: 13..65 e-value: 1.2E-8 score: 37.2
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 10..74
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 10..74 coord: 45..116
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 45..116
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 25..37
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 61..73
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 97..109
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 8..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008712.1	Sed0008712.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding