Sed0008711 (gene) Chayote v1

Overview


Name	Sed0008711
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ferroxidase
Location	LG11: 2188776 .. 2190871 (+)
RNA-Seq Expression	Sed0008711
Synteny	Sed0008711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAAGCTCCTTCCTCCTCTGCGTAAGCTTCCAAGGATGTTGAAGATGCCGTCTTCTTCATCATATCTTCTCCTAAATCTTTCCGATAATCCTAATCAATTTCCATCCTCTGGATTTCTTCGGCGAGGATTCTCCAGGCCCTTCCGCCATTGATTATGGGTAACTACTTGTTCCTTTTCTTTTCTTCTCAGAGAAACTACCTGTTTTGAATCGAAAATTTGCACTAATTTTACCCCTTTCCCAATTTGTTATTGCGTTTTTGAAGCCTGTTTCAATCTGGTAATTTATTGGTTTTGAGGTGTAATCGTATGTTATTTAATCGAAATCTAATACCATATTAGATAACATGCTACTTAAAACCTAAGGGTGAACATGAGTTTGGTTGGGTCCAAAGTCAATTCTATATTTTCAGGATTAGTTGGATTGCGTTGGGTTGAGTTATTGGGTTCATGAATATATTGCGAATATAAATATCTTTTATAAAATTAGTCATGCACTATAAATAAATAAAATACAATCTCTAATCATATGATAAGGTAATGAAATTAATATAAATATTAAATATGCAAAATATTTAAATTCAAATTCATCCACCATTAATTCTACAATGATGGTTCATATTGAATATCTCGATTATAGAACATAAAACAAATAAATAGGTAACATAACAAGACATTATTCGACTCCCACGAAACAAACCAATAAAAATAATATTTTTAACATGATATATATATTATAAAGACTTCAAAAAAACATAAAAAAATATTGGAAAATAAAAAAGTCTAAAAATAATAATTAAATAAAATAAATGTACACATGTTATATTTAAAAGAAAATATTTTTTAAACCGAGTTGGTCGGGTTGACTCGGATTCATTTTAGGTCAACCCTTGACCCAACTCAACTCATGAAAAAATCATGATTTTGAACCCAACCAAAAAATGTATTTAACCCAACCCAATTTCAATATTTGGTAGATAAGAGCTAAAGTGGTCTTGGCTAATCTTTGCTGCAGTTCTCTGATGCAGGAAGGAGAGTTTCACAGGCTAGCTGATTCCACAATTCATGGAATGCAACAGAGATTAGAGGTCATTGTTAATCAATGAACTGCCATTTCTTTGCCTTTGATTAAGTAACAGTTTATATTTTGCTAAAATGTTGTTCAACTTTATTTCATTGCCTGCTAGAATATGGTGATGATATCCAAATTGATGGCTTTGACGTTGACTATGGGGTTACTATGAGTTAGCCAGTTGTAAAATTTGTTCATTTCATTCACATGAATGGATGATGCTTAATTTTATCCGATTTTCGCTTCGTAGAACAAGGTACGACCTTGAGGCTCGGCGATATCAGCACTTACATCTTGAACAAACAAACACCGAACAGACAAATTTGGCTGTCATCCCCTGTGAGGTATGTGCTTTACTCGTTACTCATTTTCCTGTTAAAAATTTGAAGGTGCTTAGGCAAATTGAGTTCAATTTATGGTAGCTATTTATTTTAGAATTAGTTGTTTACTGGTTTCTTCGAGAACTAAGTATAGTAAGGTGAGAGTCGAGATGGTTGTCCCGTGAAAACAATTGAGGTGCAGGTAAGCTGACTGGTCAGAAAACTCAAAACTCACCAATATAAAAAAATAATGTTTACCCATTCACAAGGGCATGCCTCATTTACCCGCATCTCTGGAACTTGAAACTCAAACAAAGAGGTTGTTGTTGGTTACTCATCCATATATTAAGAAGAAATATTGTTTGGTTTCTTATTGTGAGCTTTGTTTTTATTTGATTCCACTCTAACATGAAATTTAATTTTAATTGGGGAAGAAACAACTTAACAAGGATTCGAACTCATGACCTTCTGCTCTGATGAATTATGTTAAACCACCCATCAATCCAAAAGTCTAAGCTGATAGATTGAGGTAAATTTGATTATATCAACCAACATGTTCTTCCATGCAGTGGTCCGTTCAGGTTTGATTGGGATGAGAACTCGCAGGCTTGGATTTATAGGCGAAACAAAGCGAACCTGTCGAGACTTCTAGAAACTGAATTGGCGCAACTCTGTGGTGAGCCAATTGATCTTTGTTGA

mRNA sequence

ATGGCTGCCAAGCTCCTTCCTCCTCTGCGTAAGCTTCCAAGGATGTTGAAGATGCCGTCTTCTTCATCATATCTTCTCCTAAATCTTTCCGATAATCCTAATCAATTTCCATCCTCTGGATTTCTTCGGCGAGGATTCTCCAGGCCCTTCCAATATGGTGATGATATCCAAATTGATGGCTTTGACGTTGACTATGGGGTTACTATGAGTACGACCTTGAGGCTCGGCGATATCAGCACTTACATCTTGAACAAACAAACACCGAACAGACAAATTTGGCTGTCATCCCCTGTGAGTGGTCCGTTCAGGTTTGATTGGGATGAGAACTCGCAGGCTTGGATTTATAGGCGAAACAAAGCGAACCTGTCGAGACTTCTAGAAACTGAATTGGCGCAACTCTGTGGTGAGCCAATTGATCTTTGTTGA

Coding sequence (CDS)

ATGGCTGCCAAGCTCCTTCCTCCTCTGCGTAAGCTTCCAAGGATGTTGAAGATGCCGTCTTCTTCATCATATCTTCTCCTAAATCTTTCCGATAATCCTAATCAATTTCCATCCTCTGGATTTCTTCGGCGAGGATTCTCCAGGCCCTTCCAATATGGTGATGATATCCAAATTGATGGCTTTGACGTTGACTATGGGGTTACTATGAGTACGACCTTGAGGCTCGGCGATATCAGCACTTACATCTTGAACAAACAAACACCGAACAGACAAATTTGGCTGTCATCCCCTGTGAGTGGTCCGTTCAGGTTTGATTGGGATGAGAACTCGCAGGCTTGGATTTATAGGCGAAACAAAGCGAACCTGTCGAGACTTCTAGAAACTGAATTGGCGCAACTCTGTGGTGAGCCAATTGATCTTTGTTGA

Protein sequence

MAAKLLPPLRKLPRMLKMPSSSSYLLLNLSDNPNQFPSSGFLRRGFSRPFQYGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETELAQLCGEPIDLC

Homology

[Close]

BLAST of Sed0008711 vs. NCBI nr
Match: XP_022140770.1 (frataxin, mitochondrial [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40
Identity = 105/196 (53.57%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRR 60
           MA KLL PLRKL R+LK+PSSSSY                 LL +SDN +QF    F R 
Sbjct: 1   MATKLL-PLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRS 60

Query: 61  GFSRPF----------------------------------------QYGDDIQIDGFDVD 120
             SRP                                         +YGDD+QIDGFDVD
Sbjct: 61  FCSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSR 141
           YG  +  TL+LGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD+NSQAWIYRRNKANL R
Sbjct: 121 YGNEV-LTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLR 180

[Close]

BLAST of Sed0008711 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-39
Identity = 106/197 (53.81%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 1   MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSR 60

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         +YGDD+QIDGFDV
Sbjct: 61  SFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDV 120

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRRNKANL 
Sbjct: 121 DYGNEV-LTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLL 180

[Close]

BLAST of Sed0008711 vs. NCBI nr
Match: XP_023533562.1 (frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-38
Identity = 103/197 (52.28%), Postives = 117/197 (59.39%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 1   MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSR 60

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         ++GDD+QIDGFDV
Sbjct: 61  SFCSRPLDFVGDDSRGPATIDYSSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQIDGFDV 120

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSP SGP RFDWD++SQAWIYRRNKANL 
Sbjct: 121 DYGNEV-LTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRNKANLL 180

[Close]

BLAST of Sed0008711 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 103/197 (52.28%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 29  MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSR 88

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         +YGDD+QIDGFDV
Sbjct: 89  SFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDV 148

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL 
Sbjct: 149 DYGNEV-LTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLL 208

[Close]

BLAST of Sed0008711 vs. NCBI nr
Match: XP_022947402.1 (frataxin, mitochondrial [Cucurbita moschata])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 103/197 (52.28%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 1   MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSR 60

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         +YGDD+QIDGFDV
Sbjct: 61  SFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDV 120

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL 
Sbjct: 121 DYGNEV-LTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLL 180

[Close]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-32
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 52  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQ 111
           YGD++QIDGFD+DYG  +  TL+LG + TY+LNKQTPNRQIW+SSPVSGP RFDWD ++ 
Sbjct: 99  YGDNVQIDGFDIDYGNEV-LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDAN 158

Query: 112 AWIYRRNKANLSRLLETELAQLCGEPIDL 141
           AWIYRR +A L +LLE EL  LCGEPI L
Sbjct: 159 AWIYRRTEAKLHKLLEEELENLCGEPIQL 186

[Close]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 59  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRN 118
           + +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  +
Sbjct: 122 EDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGRNWVYSHD 181

Query: 119 KANLSRLLETELAQLCGEPIDL 141
             +L  LL TEL Q     +DL
Sbjct: 182 GVSLHELLATELTQALKTKLDL 201

[Close]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 58  IDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRR 117
           ++ +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  
Sbjct: 117 LEDYDVSFGDGVLTIKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSH 176

Query: 118 NKANLSRLLETELAQLCGEPIDL 141
           +  +L  LL  EL +     +DL
Sbjct: 177 DGVSLHELLARELTKALNTKLDL 197

[Close]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 59  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRN 118
           + +DV +G  + T    GD+ TY++NKQTPN+QIWLSSP SGP R+DW    + W+Y  +
Sbjct: 121 EDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHD 180

Query: 119 KANLSRLLETELAQLCGEPIDL 141
             +L  LL  EL +     +DL
Sbjct: 181 GVSLHELLAAELTKALKTKLDL 200

[Close]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot
Match: Q54C45 (Frataxin, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=fxn PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-13
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 59  DGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRN 118
           +GF+V+ G     T+ +G+  TY++NKQTPNRQIW SSP+SGP RFD+D   + W+  R+
Sbjct: 113 EGFEVE-GNDGVLTIIVGNKGTYVINKQTPNRQIWWSSPLSGPKRFDYDSVEKRWVDNRD 172

Query: 119 KANLSRLLETELAQLC 135
              L +LL +E+  LC
Sbjct: 173 GTPLRQLLNSEINTLC 187

[Close]

BLAST of Sed0008711 vs. ExPASy TrEMBL
Match: A0A6J1CG34 (Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.9e-41
Identity = 105/196 (53.57%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPSSSSYL----------------LLNLSDNPNQFPSSGFLRR 60
           MA KLL PLRKL R+LK+PSSSSY                 LL +SDN +QF    F R 
Sbjct: 1   MATKLL-PLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRS 60

Query: 61  GFSRPF----------------------------------------QYGDDIQIDGFDVD 120
             SRP                                         +YGDD+QIDGFDVD
Sbjct: 61  FCSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSR 141
           YG  +  TL+LGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD+NSQAWIYRRNKANL R
Sbjct: 121 YGNEV-LTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLR 180

[Close]

BLAST of Sed0008711 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 7.1e-40
Identity = 106/197 (53.81%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 1   MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSR 60

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         +YGDD+QIDGFDV
Sbjct: 61  SFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDV 120

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLGD+ TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRRNKANL 
Sbjct: 121 DYGNEV-LTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLL 180

[Close]

BLAST of Sed0008711 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.6e-38
Identity = 103/197 (52.28%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPS-----------SSSYL------LLNLSDNPNQFPSSGFLR 60
           MA KLL PLRKL R+LK+PS             SYL      LL+LSDN +QF    F R
Sbjct: 1   MATKLL-PLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSR 60

Query: 61  RGFSRPF----------------------------------------QYGDDIQIDGFDV 120
              SRP                                         +YGDD+QIDGFDV
Sbjct: 61  SFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDV 120

Query: 121 DYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLS 141
           DYG  +  TLRLG + TY+LNKQTPNRQIWLSSPVSGP RFDWD++SQAWIYRR+KANL 
Sbjct: 121 DYGNEV-LTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLL 180

[Close]

BLAST of Sed0008711 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.6e-37
Identity = 97/191 (50.79%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 3   AKLLPPLRKLPRMLKMPSSSSYL-------------LLNLSDNPNQFPSSGFLRRGFSRP 62
           AKLL PLRKL R+LK+PS SS               L+++ +N +QF    FLR   SRP
Sbjct: 34  AKLL-PLRKLSRILKLPSYSSCSFRKFPHLLEASSPLIHIFNNVHQFHPPSFLRSFCSRP 93

Query: 63  F----------------------------------------QYGDDIQIDGFDVDYGVTM 122
                                                    +YGD++QIDGFDVDYG  +
Sbjct: 94  LDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQIDGFDVDYGNEV 153

Query: 123 STTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLETE 141
             TLRLG++ TY+LNKQTPNRQIWLSSP+SGP RFDWD+NSQ WIYRRNKANL  LLETE
Sbjct: 154 -LTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNKANLLSLLETE 213

[Close]

BLAST of Sed0008711 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.6e-37
Identity = 98/193 (50.78%), Postives = 117/193 (60.62%), Query Frame = 0


Query: 1   MAAKLLPPLRKLPRMLKMPSSSS-------YL------LLNLSDNPNQFPSSGFLRRGFS 60
           MA KLL PL KL R+LK+PSSSS       YL      L+++S+N +QF    F +   S
Sbjct: 1   MATKLL-PLHKLSRILKLPSSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQSFCS 60

Query: 61  RPF----------------------------------------QYGDDIQIDGFDVDYGV 120
           RP                                         +YGD++QIDGFDVDYG 
Sbjct: 61  RPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVDYGN 120

Query: 121 TMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQAWIYRRNKANLSRLLE 141
            +  TLRLG++ TY+LNKQTPNRQIWLSSP+SGP RFDWD+NS+AWIYRRNKANL  LLE
Sbjct: 121 EV-LTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSLLE 180

[Close]

BLAST of Sed0008711 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 137.9 bits (346), Expect = 6.3e-33
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 52  YGDDIQIDGFDVDYGVTMSTTLRLGDISTYILNKQTPNRQIWLSSPVSGPFRFDWDENSQ 111
           YGD++QIDGFD+DYG  +  TL+LG + TY+LNKQTPNRQIW+SSPVSGP RFDWD ++ 
Sbjct: 99  YGDNVQIDGFDIDYGNEV-LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDAN 158

Query: 112 AWIYRRNKANLSRLLETELAQLCGEPIDL 141
           AWIYRR +A L +LLE EL  LCGEPI L
Sbjct: 159 AWIYRRTEAKLHKLLEEELENLCGEPIQL 186

The following BLAST results are available for this feature:

BLAST of Sed0008711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140770.1	1.0e-40	53.57	frataxin, mitochondrial [Momordica charantia]	[more]
XP_022971111.1	1.5e-39	53.81	frataxin, mitochondrial [Cucurbita maxima]	[more]
XP_023533562.1	3.6e-38	52.28	frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6604827.1	1.8e-37	52.28	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947402.1	1.8e-37	52.28	frataxin, mitochondrial [Cucurbita moschata]	[more]

BLAST of Sed0008711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	8.9e-32	68.54	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
Q05B87	2.6e-15	46.34	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
O35943	2.2e-14	43.37	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q16595	2.9e-14	43.90	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]
Q54C45	1.9e-13	47.37	Frataxin, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=fxn PE=3 SV=1	[more]

BLAST of Sed0008711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG34	4.9e-41	53.57	Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1	[more]
A0A6J1I2E7	7.1e-40	53.81	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1G6C8	8.6e-38	52.28	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]
A0A0A0KAC6	5.6e-37	50.79	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]
A0A1S3BJ48	5.6e-37	50.78	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]

BLAST of Sed0008711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	6.3e-33	68.54	frataxin homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 68..83 score: 31.25 coord: 83..98 score: 81.25
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 18..141 e-value: 2.6E-25 score: 100.1
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 61..139 e-value: 4.7E-17 score: 59.9
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 54..137 e-value: 8.4E-26 score: 90.2
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 51..140
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 12..138 score: 19.200811
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 45..141 e-value: 1.2E-27 score: 98.2
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 54..138
None	No IPR available	PANTHER	PTHR16821:SF2	FRATAXIN, MITOCHONDRIAL	coord: 51..140
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 82..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008711.1	Sed0008711.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006811	ion transport
biological_process	GO:0018283	iron incorporation into metallo-sulfur cluster
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0034986	iron chaperone activity