Sed0008704 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCCCCTTTCTAAGAGAATCAGCTTCTCCTTTCTGCAACTTTTCTTCAAAGCTCGAAACCCTAAATTTCGAAAATGGCAGCCACATCCCGATTGGCCAGGTTCATCAGCGAGGCTCGCCCTCCCCAGTTTATGTCCGTGATTCGGCGCCGAACCCCCAATGTTTTGGACACCATTAACGAAGAAGATCACCGAGAAACCCTAGCCGCCTCTTCCTCCCTGAAGATCGAACGGTTCTCTGTTTCTTCCCCGCCGAAATTCCCCAATTCTTTCTCGATCAGGTCCCCTTGAGGCCTTTCTCCATTTTCGAGCACTTAGATTTGGGGGTTTTTTGTAATTACTTTCTGATTTTTGTTTGTAAATCCTCTGTAATCTGCTTTTCCGTTTTGCGCCGATCGGGTCCGGTGGCCGGAAATCGTGTTGTAGATAATGAGACGGCGGCGGATTCGGCTGCCGGCGTTCAATGTATGTATTTCTCAACGTGTTTTTGTACCGTGTAATTTGATAATTAATTGATAGGTTATGTTTGGTTAAG AAAATCCCCTTTCTAAGAGAATCAGCTTCTCCTTTCTGCAACTTTTCTTCAAAGCTCGAAACCCTAAATTTCGAAAATGGCAGCCACATCCCGATTGGCCAGGTTCATCAGCGAGGCTCGCCCTCCCCAGTTTATGTCCGTGATTCGGCGCCGAACCCCCAATGTTTTGGACACCATTAACGAAGAAGATCACCGAGAAACCCTAGCCGCCTCTTCCTCCCTGAAGATCGAACGGTTCTCTGTTTCTTCCCCGCCGAAATTCCCCAATTCTTTCTCGATCAGGTCCCCTTGAGGCCTTTCTCCATTTTCGAGCACTTAGATTTGGGGGTTTTTTGTAATTACTTTCTGATTTTTGTTTGTAAATCCTCTGTAATCTGCTTTTCCGTTTTGCGCCGATCGGGTCCGGTGGCCGGAAATCGTGTTGTAGATAATGAGACGGCGGCGGATTCGGCTGCCGGCGTTCAATGTATGTATTTCTCAACGTGTTTTTGTACCGTGTAATTTGATAATTAATTGATAGGTTATGTTTGGTTAAG ATGGCAGCCACATCCCGATTGGCCAGGTTCATCAGCGAGGCTCGCCCTCCCCAGTTTATGTCCGTGATTCGGCGCCGAACCCCCAATGTTTTGGACACCATTAACGAAGAAGATCACCGAGAAACCCTAGCCGCCTCTTCCTCCCTGAAGATCGAACGGTTCTCTGTTTCTTCCCCGCCGAAATTCCCCAATTCTTTCTCGATCAGGTCCCCTTGA MAATSRLARFISEARPPQFMSVIRRRTPNVLDTINEEDHRETLAASSSLKIERFSVSSPPKFPNSFSIRSP Homology
BLAST of Sed0008704 vs. NCBI nr
Match: KAA0054015.1 (hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK20701.1 hypothetical protein E5676_scaffold480G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Sed0008704 vs. NCBI nr
Match: KAG7019500.1 (hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Sed0008704 vs. NCBI nr
Match: KAG6583880.1 (hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Sed0008704 vs. NCBI nr
Match: KGN65872.1 (hypothetical protein Csa_023250 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Sed0008704 vs. NCBI nr
Match: PQP93653.1 (hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 65.1 bits (157), Expect = 2.8e-07 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Sed0008704 vs. ExPASy TrEMBL
Match: A0A5A7UJX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00970 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.2e-17 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0
BLAST of Sed0008704 vs. ExPASy TrEMBL
Match: A0A0A0LYE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Sed0008704 vs. ExPASy TrEMBL
Match: A0A314XQS6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10926 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Sed0008704 vs. ExPASy TrEMBL
Match: A0A5E4FYK5 (PREDICTED: galactosyltransferase family OS=Prunus dulcis OX=3755 GN=ALMOND_2B011231 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of Sed0008704 vs. ExPASy TrEMBL
Match: A0A6J5WYZ3 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25601 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Sed0008704 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 9.3e-09 Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Sed0008704 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein ) HSP 1 Score: 46.6 bits (109), Expect = 9.7e-06 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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