Sed0008680 (gene) Chayote v1

Overview
NameSed0008680
Typegene
OrganismSechium edule (Chayote v1)
Descriptionstress-induced protein KIN2-like
LocationLG01: 64948991 .. 64949636 (+)
RNA-Seq ExpressionSed0008680
SyntenySed0008680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAATTCTCAAAATTTAAGTTACCAAGCTGGAGAAGCCAAAGGCCAAGCACAGGTTCTCACTTTTCCATTGTTATATTAGAACATATCATTATTTGTTATACTTTTATAGTTTATATTGTTAGTGGTATCATCTCAACATTAAAATAGTTATTGATATAACTTTTTATTATAGGAGATTTTATATGGATAATAAAAAATGGTAAAATATATTTTCATTTATAATACAAAATTAAGACTAATTTATTTATAGTAAAAAAAATCTTCTATTCACTAATTGAGTTCTATGAGGATAGAATTTAATTAGTGATAGACTCATTCTATTACTAGGCTCTATCACTGATAGAAAATTATATTTCATTAATTAATGGTAGATTCATTTTGTATGACTGATTGAGTTTTATCACTAATACAAAATTATATACTATAAAGAATTATTGGAGAAAGTAAAAATTATTGTACAAATATAATATAAGAGGTAGAGTATGATGATGTAGGAAAAGGCAAGTAATATGATGGACAAGGCAGGTGATGTGGCTCAATCAACCAAAGAGTCTATGCAAAATGCAGGACAGCAAATGCAGGTTAAAGCACAAAGTGCGGCTGATGCTGTTAAGGATGCTGCTGGCATGCACAAATGA

mRNA sequence

ATGGCAGACAATTCTCAAAATTTAAGTTACCAAGCTGGAGAAGCCAAAGGCCAAGCACAGGAAAAGGCAAGTAATATGATGGACAAGGCAGGTGATGTGGCTCAATCAACCAAAGAGTCTATGCAAAATGCAGGACAGCAAATGCAGGTTAAAGCACAAAGTGCGGCTGATGCTGTTAAGGATGCTGCTGGCATGCACAAATGA

Coding sequence (CDS)

ATGGCAGACAATTCTCAAAATTTAAGTTACCAAGCTGGAGAAGCCAAAGGCCAAGCACAGGAAAAGGCAAGTAATATGATGGACAAGGCAGGTGATGTGGCTCAATCAACCAAAGAGTCTATGCAAAATGCAGGACAGCAAATGCAGGTTAAAGCACAAAGTGCGGCTGATGCTGTTAAGGATGCTGCTGGCATGCACAAATGA

Protein sequence

MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVKDAAGMHK
Homology
BLAST of Sed0008680 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 4.8e-17
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKA D AQS KESMQ AGQQM+ KAQ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. NCBI nr
Match: XP_022925433.1 (stress-induced protein KIN2-like [Cucurbita moschata] >KAG6592322.1 hypothetical protein SDJN03_14668, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQNLSYQ GEAKGQAQEKASN+MDKA D AQSTK+S+Q+AGQQM VKAQ A D+VK
Sbjct: 1  MADNSQNLSYQIGEAKGQAQEKASNLMDKASDAAQSTKDSIQDAGQQMMVKAQDAVDSVK 60

Query: 61 DAAGMHK 68
          DA G+ K
Sbjct: 61 DATGLKK 67

BLAST of Sed0008680 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNS+ +SY  GEAKGQAQEKASN+MDKAGD AQS KESMQ AGQQM+ KAQ AADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. NCBI nr
Match: XP_024177545.1 (stress-induced protein KIN2 [Rosa chinensis] >PRQ53214.1 hypothetical protein RchiOBHm_Chr2g0164011 [Rosa chinensis])

HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQ +SY AGEAKGQAQEKA+ MMDKAG+ AQS KESMQNAG+Q+Q KAQ AADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKANTMMDKAGNAAQSAKESMQNAGEQVQAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 8.3e-17
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQN+SYQ GEAKGQAQEKASNMM+KA D AQS KES+Q  GQQM+ KAQ AADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKA D AQS KESMQ AGQQM+ KAQ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKA D AQS KESMQ AGQQM+ KAQ AADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. ExPASy TrEMBL
Match: A0A2P6S3F1 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0164011 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQ +SY AGEAKGQAQEKA+ MMDKAG+ AQS KESMQNAG+Q+Q KAQ AADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKANTMMDKAGNAAQSAKESMQNAGEQVQAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 53/67 (79.10%), Postives = 58/67 (86.57%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNS+ +SY  GEAKGQAQEKASN+MDKAGD AQS KESMQ AGQQM+ KAQ AADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAAGMHK 68
          DA GM+K
Sbjct: 61 DATGMNK 67

BLAST of Sed0008680 vs. ExPASy TrEMBL
Match: A0A6J1EF62 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111432729 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          MADNSQNLSYQ GEAKGQAQEKASN+MDKA D AQSTK+S+Q+AGQQM VKAQ A D+VK
Sbjct: 1  MADNSQNLSYQIGEAKGQAQEKASNLMDKASDAAQSTKDSIQDAGQQMMVKAQDAVDSVK 60

Query: 61 DAAGMHK 68
          DA G+ K
Sbjct: 61 DATGLKK 67

BLAST of Sed0008680 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 2.2e-15
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          M+ NSQN+S+QAG+AKGQ QEKAS MMDKA + AQS KES++  GQQ++ KAQ A ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DAAGMHK 68
          +A GM+K
Sbjct: 61 NATGMNK 67

BLAST of Sed0008680 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 73.9 bits (180), Expect = 5.3e-14
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0

Query: 3  DNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVKDA 62
          DN QN SYQAG+A GQ +EKA  MMDKA D A S ++S+Q  GQQM+ KAQ AAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 AGMHK 68
           GM+K
Sbjct: 62 TGMNK 66

BLAST of Sed0008680 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13
Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 0

Query: 1  MADNSQNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVK 60
          M++NSQ++S+ AG+AKGQ QEKASN++DKA + AQS KES+Q  GQQ++ KAQ A++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DAAGMHK 68
          +  G+ K
Sbjct: 61 EKTGISK 67

BLAST of Sed0008680 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 40.8 bits (94), Expect = 5.0e-04
Identity = 24/56 (42.86%), Postives = 30/56 (53.57%), Query Frame = 0

Query: 6  QNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVKD 62
          Q  SY+AGE +G+AQEK    M   GD  Q+ K+  Q   Q  Q KA   A + KD
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

BLAST of Sed0008680 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 40.8 bits (94), Expect = 5.0e-04
Identity = 24/56 (42.86%), Postives = 30/56 (53.57%), Query Frame = 0

Query: 6  QNLSYQAGEAKGQAQEKASNMMDKAGDVAQSTKESMQNAGQQMQVKAQSAADAVKD 62
          Q  SY+AGE +G+AQEK    M   GD  Q+ K+  Q   Q  Q KA   A + KD
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008437025.14.8e-1780.60PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-... [more]
XP_022925433.16.3e-1779.10stress-induced protein KIN2-like [Cucurbita moschata] >KAG6592322.1 hypothetical... [more]
XP_004152387.16.3e-1779.10stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C... [more]
XP_024177545.16.3e-1779.10stress-induced protein KIN2 [Rosa chinensis] >PRQ53214.1 hypothetical protein Rc... [more]
XP_004152386.18.3e-1779.10stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TJP02.3e-1780.60Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3ASP12.3e-1780.60stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV... [more]
A0A2P6S3F13.1e-1779.10Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0164011 PE=4... [more]
A0A0A0KRE13.1e-1779.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1[more]
A0A6J1EF623.1e-1779.10stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111432729 P... [more]
Match NameE-valueIdentityDescription
AT5G38760.12.2e-1562.69Late embryogenesis abundant protein (LEA) family protein [more]
AT3G02480.15.3e-1463.08Late embryogenesis abundant protein (LEA) family protein [more]
AT5G53820.12.0e-1355.22Late embryogenesis abundant protein (LEA) family protein [more]
AT1G52690.15.0e-0442.86Late embryogenesis abundant protein (LEA) family protein [more]
AT1G52690.25.0e-0442.86Late embryogenesis abundant protein (LEA) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availablePANTHERPTHR34191:SF15BNAA01G32930D PROTEINcoord: 1..67
IPR039624Stress-induced protein KIN1/KIN2PANTHERPTHR34191LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008680.1Sed0008680.1mRNA