Sed0008675 (gene) Chayote v1

Overview
NameSed0008675
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSodium-bile acid cotransporter, putative
LocationLG07: 16097916 .. 16102882 (-)
RNA-Seq ExpressionSed0008675
SyntenySed0008675
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGGCCACTCTCTGTGAGTATTGTTCATTTTGCTTCTTGATTTCGTGGCTGAAATTTGAGATTGATTGCCTCTGTGTTGCTTTGTGTTTAGATATTGTTTGGATGTGTGGCTCAGTACACTATCATGCCCGCTGCTGCTGCTCTCAGCTCTCATTGGAAACTTTCTCGGGCTTTCTCAAAGCTTTGTGCGCTTTTGGTCGGTTTGATCTTGCTTGTGATGTTGCCACTCGTGGGATCGCCTTCAATGTGGTAATACTTTGATAGAATCTACCACACTTTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAAGACGATAATTCAATGGATGCCTAATAAAGACCTAACCTCTCCTATTTATAATGACTCTAAACCCTAGCCTTTTACTTGTTCTCCATGTAAACCCCTAATTGAATAATAATCTCTAATAAGGCCCAAAAGCCCAATACAAATGAAATAACAATTAATTAATCAATAATGAATACTAATACTAATATTCCTAAAACTCCAAGGTCCGGATCGTATCATACTTGTAATCTGTATTCTTATATATTCTGTGATAGTAAAGGGACTCACAAACCAAGGATTTGTTTGTGTGTGTGATAAAACATTCTTTGAGAAAGAAAGTTAAATAACAATATAAAGCAATTAAGAAGGCATTGAGGTGCTAAAGGTGATGAGTTTAATCTATGATGGTCACCTACCTAAAAATTAATTTCTTATGGCCTATGAGTTTCCTTAATATCCAAATGTTGTAGGGTCAGGCGTTATGTCCAAGTAGGCCTGCACAACCACAAATATTAAATTAAAAAAAAACAATATAAAGCATCTATCAATTGCTTCCTTACAAAATATTTGGCAAAGAATTGATTTTAGTTTCTGAACTTTTATGGAAGTTATTAACGATGTGTTCGGTTACAATGGTAAAACAAGTATTTTAGGCTTCATTTGATAACTATTTGGTTTTTTATTTTTGGTTATTGAAATTTAAGCCTACAAAAACTATTTTACCATATTATTTTTCTTACTTGGATATCTATATCTCACCTATATTGTAGAAACCAAACCGAAATGTGAAAAAAAAAAGTAGCTTCCAAAACCTTGTTTTTGTCGTTGAGCATTGGTTAGCATTTACATATTTTTTAAAGGAAAGATGGATATATGGTAGGAAGGTGGAACACATGGTAGAAAATTTGAGTAAGAATAGGCTTAAATTTCAAAAACCAAAACCAAATAGTTATCAAGCGGGACGTTAGTCATTGTACTTCTAAATTTGTAATAGTTTATTACTTAACGTAAAAGATGTCAAAATTAAGTGTAGCTTTTTTTATTAGATAATGACTTGGTCTTTGTTTTCTATATACTCATTTGGTCTCTAATTAGTTTATCTTCCAAATGTAAGAAATCTCATTGAATTTTAATAGTATATTTCATGACTAAGACGAAATTATTTCAAGTTGTAAAATAAAAGAGACTAAATTAGATTAAATTCTTACAGAATTGAAGAACAGAGTAGTAACTGTTACAAACTAAATTGGAAGTGTGGACTAAAAGTGCTCGACAGCCAAAGATGTAAATTTAGAATGGCCAAAGATGTAAGATGATTATATTATATTAGTTCTACTGCAAATGCTTTTCAGAAGACAATGTTTATCCATATTTAAGAAGATTAGTCTGCTTTGTTTAAACTTCAAAGCACTCATCTTCGTTAAGTTAAGCTTTCGTTTGTGGTTACTTCAATCAAATGGTATTTCAGGTAACCTTAACTGTTCAAGGCGGCTTTCCTTTGTCTATTGTAATGACAATATGCACAACTCTAGGAGTTCTAATTCTCACTCCTTTTCTCACAAAAGTACTAGCAGGAGCTTGTGTTCCGGTCAATGATGCAAAGCTATCTATCGTCACCCTTTAGGTGAAATTTTGTTCTCATTTTTTGTTGTACTGGTGTTCTTGACTTTTTAAGTATGACTTTCCACGTCACCAAGGAGTGACGCAGTGTTGAAGACATGGGTTTTGAGGGTATGCTCCCCTCAAGGTCTCGGGTTCAAGACTCACCTGAGACATTACTCCTTTGATGTCTCTGGTGTCTGGCCTATGAACGGGCGTGGTTACCCTTGTTTCAAAAAAAGTATGACTTTCCACACCGAATCGTCGCCATTACTGTTGTCTTGTTTCTTGGCTAGATGGTAGTTTCTATTCTATTAGGTTCTTACTTGCAAAATGTATTTGTGAAATAGTGTGGACATCCATCTCAAAACCAATTGATGATGAGAGGAGTAGTCCATCTACCTTTTAAACACTTGAAGATATCCTCAACTTATCAATGTGGGATTCTCAACATGCCCCCTCAAGTTGGTGCCTCTTTTGGGCCCACCAATCTTGAATCGAATCTCAATTTCCTTTTTATTGGACCGAATACCCGTTTGGGCTTAATGGGCTCTGATACCATGTGAAATAGTGTGGACATCCATCTCAAAACCAATTGGTGATGAGAGGAGTAGTCCATCTACCTTTTAAACACTTGAAGATATTCTCAACTTATCAATGTGGGATTCTCAACAATATTTACTTCACTGGTGAAATTGGTGTTACCATTTGAACCACTCGTTGATGTTGCTGTATTAAAGTCCTCGCTGCTTGCTTGCAGGTTTTGGTTGCTTATCAATGATTGTTATTTACCTTTATCAAGTTGTGATATCAGTTGAAATTCGATTGAAAGTCGAGCCTTGTGATCATTTTTTGTCCTTGCTGCTCTGTTTTGGGATTTGGGTAATCTCTTATCTCGAGCCCCTGTTAGTTTATGTGTTTGTTTTAGATGTCTAATATGTTCTATTTGATTAGGTTGTTTGGTTAGTTTATGTGTTCGTTTTAGATGTCTGATATATTCTATTTGATTAGGTTGTTTGGTTAGCTTGTTGGTGCTTTCATTTGCAACTCAAGGAGCATTTGTTTTGATTGTTTTCAGGTAAGGACTTCTTACCTGGGTTATGTGGACCCTGCGCTTATATTATTGATTGCATCTCTTATTTGTAAGCGATACTATATTCCAGCACGTTAGATATTCAATTATATGATCTGTGAATTACATGTTTAATTGGGGTGTTAGCATGTAGCTCAGCTATGTTTCCTATATAGTAGTATCTTGATAGGATGACTTGTTTACTTGCCTGTTGAACATGTTGTGTGACCTGCCTAGGACTGAGCATGTAGCACTCTAAGACTTTTTTACTTCCATGGTAGGTTTGCACCATGGAGAGGGTAAATGAAGTACCATGCCACCTCCAATGAAGCCTAGTTTGTGCAAGCCTACATTTACCCTCTCCATGGTGCAAGCCTACCATGGAACGTCCCTTAGCTTCAAATCTTGGGTGTGTATAGGCTGCCACAGTTGGCTGCCGAGGGTCTTTCACCATCTGTAGATCAATGGACACCAATTCCATGTAGTTAGGCATGTGAACCTAGACCGGTGTAGTTTGTACAGGCCTACATTTACCCCGGTATCAGCATGCAGTGTGCACGTACACGCACTAGATGCCGAGAGGATGTCTACCTTGGACTAGTGTCGTCAGTACACCATTTTTAATTTGTCTAGAGTCGAATTCTTAAGAGTCCCCTAAGTGTTCAGATCAATGTGGTAAGCTGATTGTTAGGGCAAGAGGTCAAGAGCCCTAGTAAAAGAGTTATTTTGATAACTCAAGAGATTGGCCTGATTGTATTGCATGTAACACTAGGATGCTAGATGATGTGATGTTATGCCTACTGTACCCCGGTTGGGAATTCATATTGAGTACCTTCGTACTCACCTTTGTTTATGTAGATTTCCACTAGGTAACTTGGGATAGCCCCGAGATGGCTAGAGGAGGCGTGATCGATCATGGGAGTTCGCTACTTGTTATTTATTTTGATTCGGCATGCTAGATAGGGTTGATTCTTTATTCTGTTTTCATTTATGAAATGTTGTAATAATCTTTGGCCAGAGGGTCAAACCTTGTTTTATGTTAGTTTTGTTTGGAACGGTTGTTCTTTTAAAATTAAAAGGTTTTTGGTTTTTAGTTGTTTGAGTTATAACTGTATTTTAAACCATGCATGCTGAGTAAGAATCAGATCTAGGTCTGTTTTAGAAGTTGGGTTCTTACAAGTGTCTTCCCTCAAATCAATGGTTTTTTTTAGATCCAAATTGTTGATGGTTAGTGCATTGTTCTTAAGGATATCATATATGGAGAGTTTGGAGTAGTGATACTTCGGTGTTTTTATTACACTTGGCTGGTTTTTTTGTCGGGTAAGTTGCGTCGATCTCCTTTTTCCCCTTTGATGAATTTAGCCCCCTTTGCTCAAAGTTTTATATCAAAAGCAATTTTTTAAGAAATTGCTCGAGTTCGTAACCTACAAAGTCTGTTAAAGTCAAACTGTAGCTATGCTCCATTTGGCTCCACTATCTAGGACTTCGTTATTTTGTGACGCCATCGTGTTGAGAATTCCATATTTGAATGATGAGAGACCTCACATTCTTAATTAATAAAATGGGTAAGTTATTTCTTTCGTGACTAATTTACTAATTAACTAACTTGAGAGGTCATATATATGGAAGGTCTCACTTTAACTTACTCACATTACTTAACTCCTTCATGTTTATCTTGATTTTGTGAGTTCTTTATCTTGATTTGCAGCTATATTGCAGCCGCAATCGGAGGGTTTTGGGTAAGAGAACGAAGTGTCATATCCATCGAGGTATCGAAATCATCCTGTTTTCACTTAAAATATCTATCTACAGATGAATGAGAGAGGTAATTTGTTTGTTTGGTTCTGGTTGGGATGCAGAATTCACCGCTGGGAGTAGCATTGGCAACAGCACATTTCAGTTCAGCAATGTGTGATAATGAACATAATGGGATGCACTCTTGGGTTTTGTTGGAGATATATTCAAATTTCAACCTTCTGA

mRNA sequence

ATGCAGAGGCCACTCTCTATATTGTTTGGATGTGTGGCTCAGTACACTATCATGCCCGCTGCTGCTGCTCTCAGCTCTCATTGGAAACTTTCTCGGGCTTTCTCAAAGCTTTGTGCGCTTTTGGTCGGTTTGATCTTGCTTGTGATGTTGCCACTCGTAACCTTAACTGTTCAAGGCGGCTTTCCTTTGTCTATTGTAATGACAATATGCACAACTCTAGGAGTTCTAATTCTCACTCCTTTTCTCACAAAAGTACTAGCAGGAGCTTGTGTTCCGGTCAATGATGCAAAATATTCTCAACTTATCAATGTGGGATTCTCAACAATATTTACTTCACTGGTGAAATTGGTGTTACCATTTGAACCACTCGTTGATGTTGCTGTATTAAAGTCCTCGCTGCTTGCTTGCAGAGTTTGGAGTAGTGATACTTCGGTGTTTTTATTACACTTGGCTGGTTTTTTTGTCGGCTATATTGCAGCCGCAATCGGAGGGTTTTGGGTAAGAGAACGAAGTGTCATATCCATCGAGCATTGGCAACAGCACATTTCAGTTCAGCAATGTGTGATAATGAACATAATGGGATGCACTCTTGGGTTTTGTTGGAGATATATTCAAATTTCAACCTTCTGA

Coding sequence (CDS)

ATGCAGAGGCCACTCTCTATATTGTTTGGATGTGTGGCTCAGTACACTATCATGCCCGCTGCTGCTGCTCTCAGCTCTCATTGGAAACTTTCTCGGGCTTTCTCAAAGCTTTGTGCGCTTTTGGTCGGTTTGATCTTGCTTGTGATGTTGCCACTCGTAACCTTAACTGTTCAAGGCGGCTTTCCTTTGTCTATTGTAATGACAATATGCACAACTCTAGGAGTTCTAATTCTCACTCCTTTTCTCACAAAAGTACTAGCAGGAGCTTGTGTTCCGGTCAATGATGCAAAATATTCTCAACTTATCAATGTGGGATTCTCAACAATATTTACTTCACTGGTGAAATTGGTGTTACCATTTGAACCACTCGTTGATGTTGCTGTATTAAAGTCCTCGCTGCTTGCTTGCAGAGTTTGGAGTAGTGATACTTCGGTGTTTTTATTACACTTGGCTGGTTTTTTTGTCGGCTATATTGCAGCCGCAATCGGAGGGTTTTGGGTAAGAGAACGAAGTGTCATATCCATCGAGCATTGGCAACAGCACATTTCAGTTCAGCAATGTGTGATAATGAACATAATGGGATGCACTCTTGGGTTTTGTTGGAGATATATTCAAATTTCAACCTTCTGA

Protein sequence

MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLPLVTLTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQLINVGFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDTSVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISVQQCVIMNIMGCTLGFCWRYIQISTF
Homology
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BLAST of Sed0008675 vs. NCBI nr
Match: XP_038903139.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-42
Identity = 135/277 (48.74%), Postives = 152/277 (54.87%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPA+AAL     + + F    +LLVGLILL   P      +VT
Sbjct: 129 MQRPLSILFGCVAQYTIMPASAAL-----IGKFFGLSPSLLVGLILLGCCPGGTASNVVT 188

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +I TPFLTK+LAGA +PV+ A+ S           L+  
Sbjct: 189 LIAQGDVPLSIVMTVCTTLGAVIFTPFLTKILAGAYIPVDAAQLSLSTLQVVVAPILLGS 248

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F SLVKLVLPF PL  VAVL SSLLAC V+S +                      
Sbjct: 249 CLQKAFPSLVKLVLPFAPL--VAVLTSSLLACSVFSENVARFKSSMVIATLASDASLWTV 308

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 208
                         SVF LH AGFFVGYI AAIGGF  RER  ISIE   Q+ S+     
Sbjct: 309 LQSILSGELGVVILSVFCLHFAGFFVGYITAAIGGFRERERRAISIEVGMQNSSLGVILA 368

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BLAST of Sed0008675 vs. NCBI nr
Match: XP_023551878.1 (probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-41
Identity = 132/275 (48.00%), Postives = 149/275 (54.18%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAA AL     + + F    +L VGLILL   P      +VT
Sbjct: 131 MQRPLSILFGCVAQYTIMPAAGAL-----IGKFFGLSTSLSVGLILLSCCPGGTASNVVT 190

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+  
Sbjct: 191 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGS 250

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F  LVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 251 YLQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMV 310

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 206
                         SVF LH AGFFVGYIAA+IGGF  RER  ISIE   Q+ S+     
Sbjct: 311 IRSILSGELGTVILSVFCLHFAGFFVGYIAASIGGFRERERRAISIEVGMQNSSLGVVLA 370

[Close]
BLAST of Sed0008675 vs. NCBI nr
Match: XP_022985149.1 (probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-41
Identity = 132/277 (47.65%), Postives = 149/277 (53.79%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAA AL     + + F     L VGLILL   P      +VT
Sbjct: 128 MQRPLSILFGCVAQYTIMPAAGAL-----IGKFFGLSTPLSVGLILLSCCPGGTASNVVT 187

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+  
Sbjct: 188 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGS 247

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F  LVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 248 YLQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMI 307

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 208
                         SVF LH AGFFVGY+AA+IGGF  RER  ISIE   Q+ S+     
Sbjct: 308 IRSILSGELGMVVLSVFCLHFAGFFVGYVAASIGGFRERERRAISIEVGMQNSSLGVVLA 367

[Close]
BLAST of Sed0008675 vs. NCBI nr
Match: XP_022929395.1 (probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-41
Identity = 131/275 (47.64%), Postives = 149/275 (54.18%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAA AL     + + F    +L VGLILL   P      +VT
Sbjct: 130 MQRPLSILFGCVAQYTIMPAAGAL-----IGKFFGLSTSLSVGLILLSCCPGGTASNVVT 189

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+  
Sbjct: 190 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGS 249

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F  LVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 250 YLQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMV 309

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 206
                         SVF LH AGFFVGYIAA+IGGF  RER  ISIE   Q+ S+     
Sbjct: 310 IRSILSGELGTVILSVFCLHFAGFFVGYIAASIGGFRERERRAISIEVGMQNSSLGVVLA 369

[Close]
BLAST of Sed0008675 vs. NCBI nr
Match: KAG6577371.1 (putative sodium/metabolite cotransporter BASS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.9 bits (450), Expect = 8.8e-41
Identity = 131/274 (47.81%), Postives = 148/274 (54.01%), Query Frame = 0 

Query: 2   QRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVTL 61
           QRPLSILFGCVAQYTIMPAA AL     + + F    +L VGLILL   P      +VTL
Sbjct: 131 QRPLSILFGCVAQYTIMPAAGAL-----IGKIFGLSTSLSVGLILLSCCPGGTASNVVTL 190

Query: 62  TVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINVG 121
             QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+   
Sbjct: 191 IAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGSY 250

Query: 122 FSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT---------------------- 181
               F  LVKLV+PF PL  VAVL SSLLAC V+S +                       
Sbjct: 251 LQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMVI 310

Query: 182 -------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV------ 206
                        SVF LH AGFFVGYIAA+IGGF  RER  ISIE   Q+ S+      
Sbjct: 311 RSILSGELGTVILSVFCLHFAGFFVGYIAASIGGFRERERRAISIEVGMQNSSLGVVLAS 370

[Close]
BLAST of Sed0008675 vs. ExPASy Swiss-Prot
Match: Q5VRB2 (Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 59/203 (29.06%), Postives = 91/203 (44.83%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAA-ALSSHWKLSRAFSKLCALLVGLILLVMLP------LV 60
           M+ P ++  G +AQY I P    A++   KLS        L  GLIL+   P      + 
Sbjct: 164 MRNPWTVGVGFLAQYLIKPMLGFAIAMTLKLS------APLATGLILVSCCPGGQASNVA 223

Query: 61  TLTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYS----------QLIN 120
           T   +G   LS++MT C+T+G +++TP LTK+LAG  VPV+ A  +           ++ 
Sbjct: 224 TYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTIVG 283

Query: 121 VGFSTIFTSLVKLVLPFEPLVDVAVLK----------SSLLACRVWSSDTSVFLLHLAGF 177
           V     F    + ++   PL+ V +            S +L  +       V LLH+A F
Sbjct: 284 VLAHEYFPKFTERIISITPLIGVLLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAF 343

[Close]
BLAST of Sed0008675 vs. ExPASy Swiss-Prot
Match: Q1EBV7 (Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS2 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.2e-05
Identity = 54/184 (29.35%), Postives = 83/184 (45.11%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           ++ P ++  G +AQY I P    L     ++        L  GLIL+   P      + T
Sbjct: 155 LRNPWTVGVGFLAQYMIKPILGFL-----IAMTLKLSAPLATGLILVSCCPGGQASNVAT 214

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYS----------QLINV 120
              +G   LS++MT C+T+G +I+TP LTK+LAG  VPV+ A  +           +I V
Sbjct: 215 YISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGV 274

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWS-SDT----------SVFLLHLAGF 158
             +  F      ++   PL+ V +L + L A  +   +D            V LLH A F
Sbjct: 275 LANEFFPKFTSKIITVTPLIGV-ILTTLLCASPIGQVADVLKTQGAQLILPVALLHAAAF 332

[Close]
BLAST of Sed0008675 vs. ExPASy Swiss-Prot
Match: Q6K739 (Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS3 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 51/198 (25.76%), Postives = 97/198 (48.99%), Query Frame = 0 

Query: 2   QRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLPLVTLT----- 61
           +RP+ +  G +AQY + P    L     ++RAF    A   G +L   +    L+     
Sbjct: 159 KRPVPLTIGYMAQYIVKPLMGVL-----IARAFGMPSAFFAGFVLTCCVSGAQLSSYASF 218

Query: 62  -VQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ--------------L 121
             +G   LSI++T C+T+  +++TP LT +L G+ VPV+    ++              L
Sbjct: 219 LSKGDVALSILLTSCSTISSVVVTPVLTGLLIGSVVPVDGIAMAKSILQVVLVPVTLGLL 278

Query: 122 INVGFSTIFTSLVKLVLPFEPLVDVAVLKSSLLA---CRVWSSDTSVFLLHLAGFFVGYI 177
           +N  ++    ++++ V+PF  ++  ++   S LA    ++ SS+  + LL +  F   +I
Sbjct: 279 LNT-YAKAVVNVIQPVMPFVAMLCTSLCIGSPLAINRSKILSSEGFLLLLPIVTF---HI 338

[Close]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match: A0A6J1JCH6 (probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483238 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 132/277 (47.65%), Postives = 149/277 (53.79%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAA AL     + + F     L VGLILL   P      +VT
Sbjct: 128 MQRPLSILFGCVAQYTIMPAAGAL-----IGKFFGLSTPLSVGLILLSCCPGGTASNVVT 187

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+  
Sbjct: 188 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGS 247

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F  LVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 248 YLQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMI 307

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 208
                         SVF LH AGFFVGY+AA+IGGF  RER  ISIE   Q+ S+     
Sbjct: 308 IRSILSGELGMVVLSVFCLHFAGFFVGYVAASIGGFRERERRAISIEVGMQNSSLGVVLA 367

[Close]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match: A0A6J1EUA3 (probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435979 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 131/275 (47.64%), Postives = 149/275 (54.18%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAA AL     + + F    +L VGLILL   P      +VT
Sbjct: 130 MQRPLSILFGCVAQYTIMPAAGAL-----IGKFFGLSTSLSVGLILLSCCPGGTASNVVT 189

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK+LAGA +PV+ AK S           L+  
Sbjct: 190 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKLLAGAYIPVDAAKLSLSTLQVVVAPILLGS 249

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F  LVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 250 YLQKAFPQLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRFKSSMVNASLASDASPWMV 309

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 206
                         SVF LH AGFFVGYIAA+IGGF  RER  ISIE   Q+ S+     
Sbjct: 310 IRSILSGELGTVILSVFCLHFAGFFVGYIAASIGGFRERERRAISIEVGMQNSSLGVVLA 369

[Close]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match: A0A6J1C8Y1 (probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008522 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 133/277 (48.01%), Postives = 149/277 (53.79%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSILFGCVAQYTIMPAAAAL     + +      +L VGLILL   P      +VT
Sbjct: 128 MQRPLSILFGCVAQYTIMPAAAAL-----IGKFLGLPPSLSVGLILLGCCPGGTASNVVT 187

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +ILTPFLTK LAGA VP++ AK S           L   
Sbjct: 188 LIAQGDVPLSIVMTVCTTLGAVILTPFLTKTLAGAYVPIDAAKLSLSTLQVVVAPILFGS 247

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
               +F SLVKLV+PF PL  VAVL SSLLAC V+S +                      
Sbjct: 248 YLQKVFPSLVKLVIPFAPL--VAVLTSSLLACSVFSENVVRLKSSMVSATLASDASPWIV 307

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISV----- 208
                         SVFLLH AGFFVGYIAA IGG+  RER  ISIE   Q+ S+     
Sbjct: 308 LKNIISGELGVVILSVFLLHFAGFFVGYIAATIGGYRERERRAISIEVGMQNSSLGVVLA 367

[Close]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match: A0A5D3BTX1 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00520 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37
Identity = 127/277 (45.85%), Postives = 147/277 (53.07%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSI+FGCVAQYTIMPA+AA+     + +      +LL GLILL   P      +VT
Sbjct: 125 MQRPLSIMFGCVAQYTIMPASAAV-----VGKFLGLSQSLLSGLILLGCCPGGSASNVVT 184

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +I TPFLTK L GA +PV+ A+ S           L+  
Sbjct: 185 LIAQGDVPLSIVMTVCTTLGAVIFTPFLTKFLVGAYIPVDAAQLSLSTLQVVVAPILLGS 244

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F SLVKLVLPF PL  VAVL SSLLA  V+S +                      
Sbjct: 245 CLQKAFPSLVKLVLPFAPL--VAVLTSSLLASSVFSENVIRIKSSMVSATLASDASLWTV 304

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISVQ---- 208
                         SVF LH AGFFVGYIAAAI GF  RER  IS++   Q+ S+     
Sbjct: 305 LQSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFQERERRTISMQVGMQNSSLGVVLA 364

[Close]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match: A0A1S3BSU0 (probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493327 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37
Identity = 127/277 (45.85%), Postives = 147/277 (53.07%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           MQRPLSI+FGCVAQYTIMPA+AA+     + +      +LL GLILL   P      +VT
Sbjct: 125 MQRPLSIMFGCVAQYTIMPASAAV-----VGKFLGLSQSLLSGLILLGCCPGGSASNVVT 184

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYSQ----------LINV 120
           L  QG  PLSIVMT+CTTLG +I TPFLTK L GA +PV+ A+ S           L+  
Sbjct: 185 LIAQGDVPLSIVMTVCTTLGAVIFTPFLTKFLVGAYIPVDAAQLSLSTLQVVVAPILLGS 244

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWSSDT--------------------- 180
                F SLVKLVLPF PL  VAVL SSLLA  V+S +                      
Sbjct: 245 CLQKAFPSLVKLVLPFAPL--VAVLTSSLLASSVFSENVIRIKSSMVSATLASDASLWTV 304

Query: 181 --------------SVFLLHLAGFFVGYIAAAIGGFWVRERSVISIEHWQQHISVQ---- 208
                         SVF LH AGFFVGYIAAAI GF  RER  IS++   Q+ S+     
Sbjct: 305 LQSILSGELGVVILSVFCLHFAGFFVGYIAAAICGFQERERRTISMQVGMQNSSLGVVLA 364

[Close]
BLAST of Sed0008675 vs. TAIR 10
Match: AT2G26900.1 (Sodium Bile acid symporter family )

HSP 1 Score: 49.3 bits (116), Expect = 4.4e-06
Identity = 54/184 (29.35%), Postives = 83/184 (45.11%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           ++ P ++  G +AQY I P    L     ++        L  GLIL+   P      + T
Sbjct: 155 LRNPWTVGVGFLAQYMIKPILGFL-----IAMTLKLSAPLATGLILVSCCPGGQASNVAT 214

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVNDAKYS----------QLINV 120
              +G   LS++MT C+T+G +I+TP LTK+LAG  VPV+ A  +           +I V
Sbjct: 215 YISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGV 274

Query: 121 GFSTIFTSLVKLVLPFEPLVDVAVLKSSLLACRVWS-SDT----------SVFLLHLAGF 158
             +  F      ++   PL+ V +L + L A  +   +D            V LLH A F
Sbjct: 275 LANEFFPKFTSKIITVTPLIGV-ILTTLLCASPIGQVADVLKTQGAQLILPVALLHAAAF 332

[Close]
BLAST of Sed0008675 vs. TAIR 10
Match: AT1G78560.1 (Sodium Bile acid symporter family )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 64/247 (25.91%), Postives = 100/247 (40.49%), Query Frame = 0 

Query: 1   MQRPLSILFGCVAQYTIMPAAAALSSHWKLSRAFSKLCALLVGLILLVMLP------LVT 60
           +  P  +  G + QY++MP +A     + +S+  +       GLIL+   P      +VT
Sbjct: 151 LSMPKELFAGFLLQYSVMPLSA-----FFVSKLLNLPPHYAAGLILVGCCPGGTASNIVT 210

Query: 61  LTVQGGFPLSIVMTICTTLGVLILTPFLTKVLAGACVPVND----------AKYSQLINV 120
              +G   LS++MT  +T+  +I+TP LT  LA   + V+                L   
Sbjct: 211 YIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGA 270

Query: 121 GFSTIFTSLVKLVLPFEPLV---DVAVLKSSLL---ACRVWSSDTSVF----LLHLAGFF 180
             +  F  LVK V P  P +    VA+L    +   A  +  S   V     LLH++GF 
Sbjct: 271 FLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASCLLHISGFL 330

Query: 181 VGYIAAAIGGFWVRERSVISIE---------------HWQQHISVQQCVIM----NIMGC 203
            GY+ + I G  V     ISIE               H+   ++   C +     +I+G 
Sbjct: 331 FGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGS 390

The following BLAST results are available for this feature:
BLAST of Sed0008675 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903139.12.1e-4248.74probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida... [more]
XP_023551878.13.0e-4148.00probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita pepo su... [more]
XP_022985149.15.2e-4147.65probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita maxima][more]
XP_022929395.15.2e-4147.64probable sodium/metabolite cotransporter BASS2, chloroplastic [Cucurbita moschat... [more]
KAG6577371.18.8e-4147.81putative sodium/metabolite cotransporter BASS1, chloroplastic, partial [Cucurbit... [more]
BLAST of Sed0008675 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5VRB22.3e-0729.06Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa su... [more]
Q1EBV76.2e-0529.35Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
Q6K7391.1e-0425.76Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Oryza sativa su... [more]
BLAST of Sed0008675 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JCH62.5e-4147.65probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita maxim... [more]
A0A6J1EUA32.5e-4147.64probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Cucurbita mosch... [more]
A0A6J1C8Y14.7e-4048.01probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X1 OS=Momo... [more]
A0A5D3BTX13.7e-3745.85Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BSU03.7e-3745.85probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX... [more]
BLAST of Sed0008675 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G26900.14.4e-0629.35Sodium Bile acid symporter family [more]
AT1G78560.11.4e-0425.91Sodium Bile acid symporter family [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002657Bile acid:sodium symporter/arsenical resistance protein Acr3PFAMPF01758SBFcoord: 1..120
e-value: 3.1E-9
score: 36.8
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 1..121
e-value: 3.4E-11
score: 44.7
NoneNo IPR availablePANTHERPTHR10361:SF58SODIUM/METABOLITE COTRANSPORTER BASS2, CHLOROPLASTIC-RELATEDcoord: 2..141
coord: 144..180
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 144..180
coord: 2..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008675.1Sed0008675.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane