Sed0008665 (gene) Chayote v1

Overview


Name	Sed0008665
Type	gene
Organism	Sechium edule (Chayote v1)
Description	multiple organellar RNA editing factor 2, chloroplastic-like
Location	LG02: 50387988 .. 50390873 (-)
RNA-Seq Expression	Sed0008665
Synteny	Sed0008665

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCCATTTCCAAAAACCCTTTCTCTCTTCCCTGCCATGGCGTTAGCCCTTCTCCGAACTATGGCTTCCGCCTCCACCTCCGCCGCCGCCGGCAGCCGCCTCTCTCTTCTTCCCAAGCGCCTTTTCTCCTCAACCACTCTTACACACCCTCCTTCACCTCCATCTCTCGCTCTCGCCCGTCGATCTCTCCCTCCCCTCTCCCACGCCGTTCGATCTATCTCCCCCGCCGCCCGGTTCGCCGCCATTCGTTGCAGCGTTAACCGGTCAGGTAACTCCGGTTACTCGCCTCTTAAATCTAACTCTAACTTCAGCGATCGCCCGCCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGCGGTGAGGGCGCTGACAAGCAGCAGATGATTGATTGCTACATTCAGACTCTTGCTAAAGTTGTTGGCAGGTGCTTTTGATGATCCAGTGTTTCGTATTCTTGATTTGTTTTGCGCTATTTGTTGGTTTTTGTTTGATTTCGGCCTGTTTTTGTGATAAGTGCAGTGAAGAGGACGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAACAAGCTTGAAGGTATGCGTTGAAATCTATTATCTTCTGTTTTCATCTTTTTCTTTGTCGCACCCAAATCAATCATTTCCAAGATATTTATACTTCGCATCTGAATTCTAGAAGGCTGTACTTGATGATTGATTTTTGTTTGAATGTTTGTCAACAGGCTTGCCAGGTGTTCTGTTTGTTCTTCCAGATTCTTACGTCGACCCTGAATATAAGGACTATGGGGGTATGGATTTGAAATTTTAATGCTATTATTTTGTTATGGCATCTTAATTCAATTTAGAGAGTTCATGATAGACAATGACATTGATATATAGAAGCTCTATATTGGCAAAGCCTTTTCTTAATTGATGTACATATAAAGAACTCTTTATGGATATGAAACATATCCCTATTCCTGCCCATAAGTACAGCGTTGCTGTTTTATATGCTCTATTGTAACAGTAACTGTTGTGGGCCCTGCCTTCATAATCCCGGACTAACCTTCTTGTGTTTTTCTGATTCATGGGAGGCACAAATTATGTGGTTATTCGCTGATAGCGTATCTTCTACTTAAAAGAGTCTGCTTTTAGTATATAACCGTACATTTTTTTCTTGTCGTTACGATAATTGTCATAGGTGAAAGTATATGTATAATATGTGTTGTATGACCTCTCAGTTCAACTGGTTAATGTTTAGTTTTGAATGCTAGTGGAATTGTGATAAATGTCTTTCTTTACTGTCCTGCTTCTGCACTTCATATTCTTTCTGAAGATGCAGGCCTGTTGAGATGAAACTCTTATCTATGCTTTTAATGCATAGATAGATATGCATTCGGACTGATCATCTTTGATATTATGCTCATGTTTTTCTCATGATATCTCGAGAAACATGACTTTTAGACTCAATAGTTCTGATAAAGTCCATCTTGGCAAAGCTAAATCAGCCTTTTAGGCAATGGTTAGTTTTGAATGCTAATGGACTCAAAACAATTGTCACTCTAAACTGTTCTGAGCTTTATGTGTATAATGGAGACTCAGATCAGTAGAGATGAAACATCCAACTTTTCATGTTTATTCATATTTATTTGAAGGGTTGTTTTTTTACCTCATTCATATTTTATTATTTGTATGGTGAAGTTTTGAATGGAAAAGAATTTGCTCTTCTGACAAGTTATGATTGTATGTGTTATAGTCCATCTTGGCAAATCTAAATCAGTTCTTTGGACAATGTTTAGCTTTGAATGCTAATGGACTTACAGTAATTGTCTCTCTCGAATGTTCTATGCTCTTTATACTTTTATGGAGATGTCGATCAATAGAGACAGAACATTAAAACCTATATATGTACATATAATGTTTTTGTTAGTCTATATATCCCATTTATATTTTAGGGTCAAATGAACAACGATAAATAGCATTCAAACAGATTACTTATTGTTTGTGCACAGTCCATCTTGGCAAACCTAAATATGTCTTCACGACAATGTTTAGTTTTGAATGCTAATGGACTTACAGCGAATGTCTCTCTAAACTGTTCTGTGCTCTTTATACTCGTGGAGATGCAGATCAGTAGAGATGAAACATCAAAGACTGCTTCTAATTCTTGGTTTTCAGTGCTAGCAGCATTATATAAATAATATGGTTTCTATAAACAAAATTGTGAAATTAAGTGAATGATAGTGTTCTCTATTGTTTTCCCTTTGCTTTTTATGAGTTGACAAATCATAGAATCATTTTGATGACGCTAACGCTACTTAATGTGCTGCTGATTACAGCTGAATTGTTCGTGAATGGTGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGGAGCCACAGCCCCAAAGGGCTCAAGATCGACCGAGGTATAACGACAGAACCCGCTATGTGAGACGCAGAGAGAACACAAGGTGAGGCGTTGTGAGAATTCAAGAACCATTCGAGAACCATGTGCATACAACTAGAAGGGAGAAGGGAATCTCAGATCTCAAGCGAAATCGGAAAGCTTAATTTGCTTTGTAATCTCCATTGTGCTTCGTAAGAGAATCAGAAACAATAGTTATTCTTTGACACATTGTTGCTCTGTAATGCAGTTATGATTTAGCTGAACTTGAATGTGTTGCAGTGGGGAATTGACTTAACTTGTGGTATTGGTGACCTGTAACCATGCTTAAGCTCTAAATGATGCAACAATTTATATCATAAGTGATCAATACGAGTTGAATGAACGGTAGATATTAATATAAAGTTCTTAGAGAGA

mRNA sequence

CATTTCCATTTCCAAAAACCCTTTCTCTCTTCCCTGCCATGGCGTTAGCCCTTCTCCGAACTATGGCTTCCGCCTCCACCTCCGCCGCCGCCGGCAGCCGCCTCTCTCTTCTTCCCAAGCGCCTTTTCTCCTCAACCACTCTTACACACCCTCCTTCACCTCCATCTCTCGCTCTCGCCCGTCGATCTCTCCCTCCCCTCTCCCACGCCGTTCGATCTATCTCCCCCGCCGCCCGGTTCGCCGCCATTCGTTGCAGCGTTAACCGGTCAGGTAACTCCGGTTACTCGCCTCTTAAATCTAACTCTAACTTCAGCGATCGCCCGCCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGCGGTGAGGGCGCTGACAAGCAGCAGATGATTGATTGCTACATTCAGACTCTTGCTAAAGTTGTTGGCAGTGAAGAGGACGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAACAAGCTTGAAGGCTTGCCAGGTGTTCTGTTTGTTCTTCCAGATTCTTACGTCGACCCTGAATATAAGGACTATGGGGCTGAATTGTTCGTGAATGGTGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGGAGCCACAGCCCCAAAGGGCTCAAGATCGACCGAGGTATAACGACAGAACCCGCTATGTGAGACGCAGAGAGAACACAAGGTGAGGCGTTGTGAGAATTCAAGAACCATTCGAGAACCATGTGCATACAACTAGAAGGGAGAAGGGAATCTCAGATCTCAAGCGAAATCGGAAAGCTTAATTTGCTTTGTAATCTCCATTGTGCTTCGTAAGAGAATCAGAAACAATAGTTATTCTTTGACACATTGTTGCTCTGTAATGCAGTTATGATTTAGCTGAACTTGAATGTGTTGCAGTGGGGAATTGACTTAACTTGTGGTATTGGTGACCTGTAACCATGCTTAAGCTCTAAATGATGCAACAATTTATATCATAAGTGATCAATACGAGTTGAATGAACGGTAGATATTAATATAAAGTTCTTAGAGAGA

Coding sequence (CDS)

ATGGCGTTAGCCCTTCTCCGAACTATGGCTTCCGCCTCCACCTCCGCCGCCGCCGGCAGCCGCCTCTCTCTTCTTCCCAAGCGCCTTTTCTCCTCAACCACTCTTACACACCCTCCTTCACCTCCATCTCTCGCTCTCGCCCGTCGATCTCTCCCTCCCCTCTCCCACGCCGTTCGATCTATCTCCCCCGCCGCCCGGTTCGCCGCCATTCGTTGCAGCGTTAACCGGTCAGGTAACTCCGGTTACTCGCCTCTTAAATCTAACTCTAACTTCAGCGATCGCCCGCCCACTGAGATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGCGGTGAGGGCGCTGACAAGCAGCAGATGATTGATTGCTACATTCAGACTCTTGCTAAAGTTGTTGGCAGTGAAGAGGACGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAACAAGCTTGAAGGCTTGCCAGGTGTTCTGTTTGTTCTTCCAGATTCTTACGTCGACCCTGAATATAAGGACTATGGGGCTGAATTGTTCGTGAATGGTGAGATTGTTCAAAGGTCACCGGAGAGACAGAGAAGGGTGGAGCCACAGCCCCAAAGGGCTCAAGATCGACCGAGGTATAACGACAGAACCCGCTATGTGAGACGCAGAGAGAACACAAGGTGA

Protein sequence

MALALLRTMASASTSAAAGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENTR

Homology

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BLAST of Sed0008665 vs. NCBI nr
Match: XP_022149612.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 219/244 (89.75%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL+LLR MASAS S +  +RLSLLPKRL  SSTTLT PPSPP+L L RRSLPPLSHAVR
Sbjct: 1   MALSLLRAMASASASTST-ARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           SI  A+RF  IRC VNRSGNSGYSPL SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SIPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKVVGSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR
Sbjct: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 243

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BLAST of Sed0008665 vs. NCBI nr
Match: XP_038896418.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113
Identity = 218/245 (88.98%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAA-GSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAV 60
           MAL+LLR MASAS SA+A  +RLSLL +RLF SS+TLTHPPS PSL L RRSLPPLSHAV
Sbjct: 1   MALSLLRAMASASPSASAYTARLSLLQRRLFSSSSTLTHPPSLPSLTLCRRSLPPLSHAV 60

Query: 61  RSISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP 120
           RSI  A+RF +IRC VNRSGNS YSPL SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP
Sbjct: 61  RSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP 120

Query: 121 GGEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPG 180
           GGEGA KQQMIDCYIQTLAKVVGSEE+AKKKIYNVSCERYFGFGCE+DEETSNKLEGLPG
Sbjct: 121 GGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPG 180

Query: 181 VLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRR 240
           VLFVLPDSYVDPEYKDYGAELFVNGEIVQR PERQRRVEPQPQRAQDRPRYNDRTRYVRR
Sbjct: 181 VLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQRRVEPQPQRAQDRPRYNDRTRYVRR 240

Query: 241 RENTR 244
           REN R
Sbjct: 241 RENAR 245

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BLAST of Sed0008665 vs. NCBI nr
Match: XP_023538940.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.2 bits (1040), Expect = 3.9e-109
Identity = 211/244 (86.48%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLFS-STTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL+LLR MASAS SA++ +RL L  KRLFS S +LT PPSPPSL LARRSLP LSHAVR
Sbjct: 1   MALSLLRVMASASASASS-ARLPLAHKRLFSASKSLTRPPSPPSLTLARRSLPLLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A    +IRC VNRSGNSGY+PL SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  STPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCY+QTLAKV+GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 121 GEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRYVRRR
Sbjct: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRR 240

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 243

[Close]

BLAST of Sed0008665 vs. NCBI nr
Match: XP_022924432.1 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_023527331.1 multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 208/244 (85.25%), Postives = 219/244 (89.75%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL++LR M S        +RLSLL +RLF SSTTLTHPPSPPSL L RRSLPPLSHAVR
Sbjct: 1   MALSVLRAMGST-------ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A+R+ +IRC VNR+GNS YSP  SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SNPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKV+GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRR
Sbjct: 181 LFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRR 237

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 237

[Close]

BLAST of Sed0008665 vs. NCBI nr
Match: KAG7018807.1 (Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 208/244 (85.25%), Postives = 219/244 (89.75%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL++LR M S        +RLSLL +RLF SSTTLTHPPSPPSL L RRSLPPLSHAVR
Sbjct: 188 MALSVLRAMGST-------ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVR 247

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A+R+ +IRC VNR+GNS YSP  SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 248 SNPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 307

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKV+GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 308 GEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 367

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRR
Sbjct: 368 LFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRR 424

Query: 241 ENTR 244
           EN R
Sbjct: 428 ENMR 424

[Close]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.5e-90
Identity = 172/219 (78.54%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 25  LPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSGNSGYSP 84
           L + L S+ TL  PP  PS          + +    +  + RF +IRC  NRSG S YSP
Sbjct: 11  LTRALLSNVTLMAPPRIPS---------SVHYGGSRLGCSTRFFSIRCGANRSG-STYSP 70

Query: 85  LKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAKVVGSEE 144
           L S SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCYIQTLAKVVGSEE
Sbjct: 71  LNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEE 130

Query: 145 DAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGE 204
           +AKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGE
Sbjct: 131 EAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGE 190

Query: 205 IVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           IVQRSPERQRRVEPQPQRAQDRPRYNDRTRY RRRENTR
Sbjct: 191 IVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.7e-86
Identity = 168/227 (74.01%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 18  AGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRS 77
           A S  S + KRL S++  T P   PS  L+RRS P  SHAV  IS   RF  IR  ++RS
Sbjct: 6   ARSTASRITKRLISTSGATTP--SPSYILSRRSTPVFSHAVGFISSLNRFTTIRTRMDRS 65

Query: 78  GNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLA 137
           G S YSPLKS SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE A KQQMIDCY+QTLA
Sbjct: 66  GGS-YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLA 125

Query: 138 KVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 197
           K++GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGA
Sbjct: 126 KIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGA 185

Query: 198 ELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           ELFVNGEIVQR PERQR+ +E   QR  D+P+Y+D+TRYVRRREN R
Sbjct: 186 ELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-85
Identity = 165/226 (73.01%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 20  SRLSLLPKRLFSSTTLTHPPSP-PSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSG 79
           S  S + KR FS++     PSP PS  ++RR  P + HAV  I    RF  IR  ++RSG
Sbjct: 8   STASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRTRMDRSG 67

Query: 80  NSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAK 139
            S YSPLKS SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY+QTLAK
Sbjct: 68  GS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAK 127

Query: 140 VVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAE 199
           +VGSEE+A+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+KDYGAE
Sbjct: 128 IVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAE 187

Query: 200 LFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           LFVNGE+V R PERQRR VE   QR  D+P+Y+DR R VRRREN R
Sbjct: 188 LFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 108/244 (44.26%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 3   LALLRTMASASTSAAAGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSIS 62
           +AL+ T  + ST         LL K L SST  ++  S P+L+   R   PL   V S  
Sbjct: 1   MALISTRRTLST---------LLNKTLSSST--SYSSSFPTLSSRSRFAMPLIEKVSSSR 60

Query: 63  PAARFAAIRCSVNRSGNSGYSPLKSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGE 122
            +     I      SG SGYSPL   S N+S+RPP E   L  GCDYEHWLIVM+    +
Sbjct: 61  TSLGPCYISTRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK 120

Query: 123 GADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 182
             + ++MI+ Y++TL  V+G EE+AKKKIY+V    Y GFG  I EE S K++ LPGVL+
Sbjct: 121 PTE-EEMINSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLW 180

Query: 183 VLPDSYVDPEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYV 241
           VLPDSY+D   KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V
Sbjct: 181 VLPDSYLDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQV 225

[Close]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31
Identity = 88/219 (40.18%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 22  LSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSGNSG 81
           LSLLPK L +  + T  P    L+ +  S  P +      S +A +  +R       +  
Sbjct: 6   LSLLPKTL-TPNSKTLAPLLSILSTSSLSFLPCTRPHPIKSRSAAYPTVRALT----DGE 65

Query: 82  YSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAKVVG 141
           YS  ++N+N +     E   + PGCDY HWLIVM+ P      ++QMID Y+ TLA V+G
Sbjct: 66  YSSRRNNNNNNSGEERETI-MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG 125

Query: 142 SEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFV 201
           S E+AKK +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D + KDYG + +V
Sbjct: 126 SMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYV 185

Query: 202 NGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 241
           NGEI+   P +    +P+  R+    +Y  +  YVR+R+
Sbjct: 186 NGEII---PCQYPTYQPKQSRSS---KYKSKA-YVRQRD 211

[Close]

BLAST of Sed0008665 vs. ExPASy TrEMBL
Match: A0A6J1D8H1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111017993 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115
Identity = 219/244 (89.75%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL+LLR MASAS S +  +RLSLLPKRL  SSTTLT PPSPP+L L RRSLPPLSHAVR
Sbjct: 1   MALSLLRAMASASASTST-ARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           SI  A+RF  IRC VNRSGNSGYSPL SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SIPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKVVGSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR
Sbjct: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 243

[Close]

BLAST of Sed0008665 vs. ExPASy TrEMBL
Match: A0A6J1E8X5 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431937 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.2e-109
Identity = 208/244 (85.25%), Postives = 219/244 (89.75%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL++LR M S        +RLSLL +RLF SSTTLTHPPSPPSL L RRSLPPLSHAVR
Sbjct: 1   MALSVLRAMGST-------ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A+R+ +IRC VNR+GNS YSP  SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SNPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKV+GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRR
Sbjct: 181 LFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRR 237

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 237

[Close]

BLAST of Sed0008665 vs. ExPASy TrEMBL
Match: A0A6J1GAI1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452422 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 209/244 (85.66%), Postives = 219/244 (89.75%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLFS-STTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL+LLR MASAS S+A   RL L  KRLFS S +LT  PSPPSL LARRSLP LSHAVR
Sbjct: 1   MALSLLRVMASASASSA---RLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A    +IRC VNRSGNSGY+PL SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  STPCAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMI+CY+QTLAKV+GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 121 GEGASKQQMIECYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRYVRRR
Sbjct: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRR 240

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 241

[Close]

BLAST of Sed0008665 vs. ExPASy TrEMBL
Match: A0A6J1IT23 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479115 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.2e-107
Identity = 205/244 (84.02%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           MAL++LR M S        +RLSLL +RLF SSTTLTHPPSPP L L RRSLPPLSH VR
Sbjct: 1   MALSVLRAMGST-------ARLSLLHRRLFSSSTTLTHPPSPPFLTLCRRSLPPLSHVVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           S   A+R+ +IRC VNR+GNS YSP  SNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SNPSASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKV+GSEE+A KKIYNVSCERYFGFGCEIDEETSNKLEGLPGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVLGSEEEAMKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRR
Sbjct: 181 LFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRR 237

Query: 241 ENTR 244
           EN R
Sbjct: 241 ENMR 237

[Close]

BLAST of Sed0008665 vs. ExPASy TrEMBL
Match: A0A5D3CZF4 (Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001860 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105
Identity = 201/242 (83.06%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MALALLRTMASASTSAAAGSRLSLLPKRLF-SSTTLTHPPSPPSLALARRSLPPLSHAVR 60
           M L+LLR MASAS S +A +RLS+LP+RLF SS+TLTHPPSP S  L RRSLP LSHAVR
Sbjct: 1   MGLSLLRAMASASVSTSA-ARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVR 60

Query: 61  SISPAARFAAIRCSVNRSGNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPG 120
           SI  ++R  + RC  +R GNS YSPL SNSNFS+RPPTEMAPLFPGCDYEHWLIVMDKPG
Sbjct: 61  SIPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPG 120

Query: 121 GEGADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 180
           GEGA KQQMIDCYIQTLAKVVGSEE+AKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGV
Sbjct: 121 GEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGV 180

Query: 181 LFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRR 240
           LFVLPDSYVDPEYKDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTRYVRRR
Sbjct: 181 LFVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRR 240

Query: 241 EN 242
           EN
Sbjct: 241 EN 241

[Close]

BLAST of Sed0008665 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-91
Identity = 172/219 (78.54%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 25  LPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSGNSGYSP 84
           L + L S+ TL  PP  PS          + +    +  + RF +IRC  NRSG S YSP
Sbjct: 11  LTRALLSNVTLMAPPRIPS---------SVHYGGSRLGCSTRFFSIRCGANRSG-STYSP 70

Query: 85  LKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAKVVGSEE 144
           L S SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCYIQTLAKVVGSEE
Sbjct: 71  LNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEE 130

Query: 145 DAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGE 204
           +AKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGE
Sbjct: 131 EAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGE 190

Query: 205 IVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           IVQRSPERQRRVEPQPQRAQDRPRYNDRTRY RRRENTR
Sbjct: 191 IVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Sed0008665 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87
Identity = 168/227 (74.01%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 18  AGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRS 77
           A S  S + KRL S++  T P   PS  L+RRS P  SHAV  IS   RF  IR  ++RS
Sbjct: 6   ARSTASRITKRLISTSGATTP--SPSYILSRRSTPVFSHAVGFISSLNRFTTIRTRMDRS 65

Query: 78  GNSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLA 137
           G S YSPLKS SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE A KQQMIDCY+QTLA
Sbjct: 66  GGS-YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLA 125

Query: 138 KVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 197
           K++GSEE+AKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGA
Sbjct: 126 KIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGA 185

Query: 198 ELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           ELFVNGEIVQR PERQR+ +E   QR  D+P+Y+D+TRYVRRREN R
Sbjct: 186 ELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of Sed0008665 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-86
Identity = 165/226 (73.01%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 20  SRLSLLPKRLFSSTTLTHPPSP-PSLALARRSLPPLSHAVRSISPAARFAAIRCSVNRSG 79
           S  S + KR FS++     PSP PS  ++RR  P + HAV  I    RF  IR  ++RSG
Sbjct: 8   STASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRTRMDRSG 67

Query: 80  NSGYSPLKSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGADKQQMIDCYIQTLAK 139
            S YSPLKS SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY+QTLAK
Sbjct: 68  GS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAK 127

Query: 140 VVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAE 199
           +VGSEE+A+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+KDYGAE
Sbjct: 128 IVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAE 187

Query: 200 LFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENTR 244
           LFVNGE+V R PERQRR VE   QR  D+P+Y+DR R VRRREN R
Sbjct: 188 LFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Sed0008665 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 108/244 (44.26%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 3   LALLRTMASASTSAAAGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSIS 62
           +AL+ T  + ST         LL K L SST  ++  S P+L+   R   PL   V S  
Sbjct: 1   MALISTRRTLST---------LLNKTLSSST--SYSSSFPTLSSRSRFAMPLIEKVSSSR 60

Query: 63  PAARFAAIRCSVNRSGNSGYSPLKSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGE 122
            +     I      SG SGYSPL   S N+S+RPP E   L  GCDYEHWLIVM+    +
Sbjct: 61  TSLGPCYISTRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK 120

Query: 123 GADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 182
             + ++MI+ Y++TL  V+G EE+AKKKIY+V    Y GFG  I EE S K++ LPGVL+
Sbjct: 121 PTE-EEMINSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLW 180

Query: 183 VLPDSYVDPEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYV 241
           VLPDSY+D   KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V
Sbjct: 181 VLPDSYLDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQV 225

[Close]

BLAST of Sed0008665 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 144.8 bits (364), Expect = 8.9e-35
Identity = 107/244 (43.85%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 3   LALLRTMASASTSAAAGSRLSLLPKRLFSSTTLTHPPSPPSLALARRSLPPLSHAVRSIS 62
           +AL+ T  + ST         LL K L SST  ++  S P+L+   R   PL   V S  
Sbjct: 1   MALISTRRTLST---------LLNKTLSSST--SYSSSFPTLSSRSRFAMPLIEKVSSSR 60

Query: 63  PAARFAAIRCSVNRSGNSGYSPLKSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGE 122
            +     I      SG SGYSPL   S N+S+RPP E   L  GCDYEHWLIVM+    +
Sbjct: 61  TSLGPCYISTRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK 120

Query: 123 GADKQQMIDCYIQTLAKVVGSEEDAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF 182
             + ++MI+ Y++TL  V+G +E+AKKKIY+V    Y GFG  I EE S K++ LPGVL+
Sbjct: 121 PTE-EEMINSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLW 180

Query: 183 VLPDSYVDPEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYV 241
           VLPDSY+D   KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V
Sbjct: 181 VLPDSYLDVPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQV 225

The following BLAST results are available for this feature:

BLAST of Sed0008665 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149612.1	1.1e-114	89.75	multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charanti...	[more]
XP_038896418.1	1.5e-113	88.98	multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida]	[more]
XP_023538940.1	3.9e-109	86.48	multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022924432.1	1.5e-108	85.25	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbi...	[more]
KAG7018807.1	1.5e-108	85.25	Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of Sed0008665 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22793	2.5e-90	78.54	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9C7Y2	1.7e-86	74.01	Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido...	[more]
O82169	1.4e-85	73.01	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84JZ6	3.3e-34	44.26	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q38732	2.6e-31	40.18	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]

BLAST of Sed0008665 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8H1	5.2e-115	89.75	multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charan...	[more]
A0A6J1E8X5	7.2e-109	85.25	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucur...	[more]
A0A6J1GAI1	1.8e-107	85.66	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1IT23	5.2e-107	84.02	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A5D3CZF4	2.2e-105	83.06	Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Sed0008665 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33430.1	1.8e-91	78.54	differentiation and greening-like 1	[more]
AT1G32580.1	1.2e-87	74.01	plastid developmental protein DAG, putative	[more]
AT2G35240.1	1.0e-86	73.01	plastid developmental protein DAG, putative	[more]
AT3G06790.2	2.4e-35	44.26	plastid developmental protein DAG, putative	[more]
AT3G06790.1	8.9e-35	43.85	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 106..189 e-value: 2.1E-6 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..243
None	No IPR available	PANTHER	PTHR31346:SF15	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2 CHLOROPLASTIC	coord: 13..243
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 13..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008665.1	Sed0008665.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion