Sed0008656 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATCTCAATTCCAATAATCTATGATCCACAAAATCCCACAACAATTTCCTTACCATTTTCCCCCACAAACATCCAAAAAGCCTCCAACTAGTTAGCCATTTTCATCCAATCTCCACACTTGTTTAAATGAAAGCTCAAATTCCCTAAACCAAACCCACCACTTGAGAAAACAATGGCTTCCCATTCCCTTTCTTCAACAATCATCCTCATTTCTCTCCTCCTCTGCTTCGCCCTAGCCGCCGCCTCCCCCTGCAACCAGCCCAAAATCAAACCCTCGCCGGCCAAAAAGAAACCCGCCGTCCCCAAAATAATCCGGCCACCGTCCACGGCGACGCCGGCCGTAAAGCCCGGGCACTGCCCAAAAAACACCGTGAAGTTCGGCGTGTGTGCGGACATTCTCGGAATCGGCAGCGTAATCGGAAGCGCCCCTGATTCGAGCGATTGCTGCGCTTTGCTCAGTGGGCTGACCGATCTGGAGGCTGCGGCCTGTGTGTGCACCGCCATTAAAGCCAATGTTGTTGGGATTAATCTGGATGTCCCTGTTTCTTTGAGTTTGCTTCTCAGCTCTTGCCAGAAGTCTGTTCCTGATGGGTATAAGTGTAAATGATCATTTTGGCTTCATTTGGGGGTTTTGTTTGTTGCTTTGTTGTTGCTTTGGTTTGTGTGTTTTGTGGGTTTAATAAATGGGCAAACAGTTTTTGCCTTCATTTGTTTTGCTTTTTGGGGGACTTTCTTAATTTCCTCCTTCCTCGTGGTTTTTGTGTTGTAATTTTTAAGAAGGATAATTCTCCTATCCATTTGGTTTCATAGCA TGAATCTCAATTCCAATAATCTATGATCCACAAAATCCCACAACAATTTCCTTACCATTTTCCCCCACAAACATCCAAAAAGCCTCCAACTAGTTAGCCATTTTCATCCAATCTCCACACTTGTTTAAATGAAAGCTCAAATTCCCTAAACCAAACCCACCACTTGAGAAAACAATGGCTTCCCATTCCCTTTCTTCAACAATCATCCTCATTTCTCTCCTCCTCTGCTTCGCCCTAGCCGCCGCCTCCCCCTGCAACCAGCCCAAAATCAAACCCTCGCCGGCCAAAAAGAAACCCGCCGTCCCCAAAATAATCCGGCCACCGTCCACGGCGACGCCGGCCGTAAAGCCCGGGCACTGCCCAAAAAACACCGTGAAGTTCGGCGTGTGTGCGGACATTCTCGGAATCGGCAGCGTAATCGGAAGCGCCCCTGATTCGAGCGATTGCTGCGCTTTGCTCAGTGGGCTGACCGATCTGGAGGCTGCGGCCTGTGTGTGCACCGCCATTAAAGCCAATGTTGTTGGGATTAATCTGGATGTCCCTGTTTCTTTGAGTTTGCTTCTCAGCTCTTGCCAGAAGTCTGTTCCTGATGGGTATAAGTGTAAATGATCATTTTGGCTTCATTTGGGGGTTTTGTTTGTTGCTTTGTTGTTGCTTTGGTTTGTGTGTTTTGTGGGTTTAATAAATGGGCAAACAGTTTTTGCCTTCATTTGTTTTGCTTTTTGGGGGACTTTCTTAATTTCCTCCTTCCTCGTGGTTTTTGTGTTGTAATTTTTAAGAAGGATAATTCTCCTATCCATTTGGTTTCATAGCA ATGGCTTCCCATTCCCTTTCTTCAACAATCATCCTCATTTCTCTCCTCCTCTGCTTCGCCCTAGCCGCCGCCTCCCCCTGCAACCAGCCCAAAATCAAACCCTCGCCGGCCAAAAAGAAACCCGCCGTCCCCAAAATAATCCGGCCACCGTCCACGGCGACGCCGGCCGTAAAGCCCGGGCACTGCCCAAAAAACACCGTGAAGTTCGGCGTGTGTGCGGACATTCTCGGAATCGGCAGCGTAATCGGAAGCGCCCCTGATTCGAGCGATTGCTGCGCTTTGCTCAGTGGGCTGACCGATCTGGAGGCTGCGGCCTGTGTGTGCACCGCCATTAAAGCCAATGTTGTTGGGATTAATCTGGATGTCCCTGTTTCTTTGAGTTTGCTTCTCAGCTCTTGCCAGAAGTCTGTTCCTGATGGGTATAAGTGTAAATGA MASHSLSSTIILISLLLCFALAAASPCNQPKIKPSPAKKKPAVPKIIRPPSTATPAVKPGHCPKNTVKFGVCADILGIGSVIGSAPDSSDCCALLSGLTDLEAAACVCTAIKANVVGINLDVPVSLSLLLSSCQKSVPDGYKCK Homology
BLAST of Sed0008656 vs. NCBI nr
Match: XP_023002543.1 (pEARLI1-like lipid transfer protein 1 [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 3.8e-51 Identity = 112/144 (77.78%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of Sed0008656 vs. NCBI nr
Match: KAG6585480.1 (hypothetical protein SDJN03_18213, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49 Identity = 111/144 (77.08%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0008656 vs. NCBI nr
Match: XP_022951458.1 (pEARLI1-like lipid transfer protein 1 [Cucurbita moschata]) HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49 Identity = 111/144 (77.08%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0008656 vs. NCBI nr
Match: XP_023538595.1 (pEARLI1-like lipid transfer protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48 Identity = 108/144 (75.00%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0008656 vs. NCBI nr
Match: XP_008445235.1 (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo] >KAA0064914.1 pEARLI1-like lipid transfer protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46 Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21 Identity = 61/145 (42.07%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.2e-21 Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.4e-21 Identity = 64/167 (38.32%), Postives = 99/167 (59.28%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.7e-20 Identity = 51/117 (43.59%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19 Identity = 50/117 (42.74%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy TrEMBL
Match: A0A6J1KTW2 (pEARLI1-like lipid transfer protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496356 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51 Identity = 112/144 (77.78%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy TrEMBL
Match: A0A6J1GHR6 (pEARLI1-like lipid transfer protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111454269 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 7.7e-50 Identity = 111/144 (77.08%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy TrEMBL
Match: A0A5A7VCB4 (PEARLI1-like lipid transfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002320 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.1e-47 Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy TrEMBL
Match: A0A1S3BC59 (pEARLI1-like lipid transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103488322 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.1e-47 Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Sed0008656 vs. ExPASy TrEMBL
Match: A0A0A0LPN2 (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_2G381890 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46 Identity = 102/147 (69.39%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Sed0008656 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 9.1e-27 Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 0
BLAST of Sed0008656 vs. TAIR 10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23 Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0
BLAST of Sed0008656 vs. TAIR 10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Sed0008656 vs. TAIR 10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Sed0008656 vs. TAIR 10
Match: AT4G12470.1 (azelaic acid induced 1 ) HSP 1 Score: 101.7 bits (252), Expect = 5.1e-22 Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|