Sed0008625 (gene) Chayote v1

Overview


Name	Sed0008625
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dof zinc finger protein 2-like
Location	LG12: 483105 .. 484106 (-)
RNA-Seq Expression	Sed0008625
Synteny	Sed0008625

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATTCTTTCTTCCTTAAAAGTCCTGCCCATTTCTCACAAAAGGTACTTCCTTTCTCTTTAGTCTTACAAATTAAAGCTCCAATTTTTCTTCCAAATTTCTCTTGTTTGTTTCTCAATAACTTCTGGGTTTTGTTCTGTTCGTCCAAAGATTTCCAAAAATGGAACAAATGATGGAGTCCGGCAGCGGCGGAGGGATCAGGCCGCCGGCAAAGGGGAAGCCTCAAGAACAATTGAACTGCCCAAGGTGCAAATCAAGCAACACCAAATTTTGTTATTACAATAATTATAGCCTTACTCAGCCGAGGTATTTTTGTAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTGAGAAACATCCCGGTCGGAGGAGGCTCCCGGAAGAATAGGAAATCGTCCGGTTCAGGAGTTGGGTCCGGTTCAGGCCAGCCGGCTCCGGCGGCGGTGTATCAAGGGCATGATCTGAATTTGGGATTTGGGGCGGCGGCGACGGTGGCGGGGGTGGAAAATGGTGGGCATGGGGGATTTGGGTGTTATATACCGAATTTGATGCCGTACTCCGGTCGGGACGCGGCGGCGTCGGCGGCGCTGGAGGAGAATTCCGGTGGGGGTAATAATGGGTATTGGAATGGGATGTTTAATGGAGGGCCGTGGTAGAGATATTAGAGAGAGATTTATGAGAAGTAAGTTAATTACATGGGTCATATTAAATTTTATTATATGAATTTAATGTTTCCTTTCTGATTGTTATTTCTCTCTTTGGTTTTTTACTATGTAATTTTCATTTTTTTCTTTTTGGATTTAGACGTGTTTTGGTTTGCTTTTGTTTGATGCTTTGTACTTTAACAAAAAAAAAAAAAAAAACTTGGCTAACAAAATGCCTTATATGTGTGATTAATTTTCTCATTATTTCTCTGGATCTTTCGCGCAAACAATTTGAATATAATTTGACTAGTTACCATATTTTCAATTGTTAAATAGTCTTCTATATTTCTTT

mRNA sequence

AAACATTCTTTCTTCCTTAAAAGTCCTGCCCATTTCTCACAAAAGATTTCCAAAAATGGAACAAATGATGGAGTCCGGCAGCGGCGGAGGGATCAGGCCGCCGGCAAAGGGGAAGCCTCAAGAACAATTGAACTGCCCAAGGTGCAAATCAAGCAACACCAAATTTTGTTATTACAATAATTATAGCCTTACTCAGCCGAGGTATTTTTGTAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTGAGAAACATCCCGGTCGGAGGAGGCTCCCGGAAGAATAGGAAATCGTCCGGTTCAGGAGTTGGGTCCGGTTCAGGCCAGCCGGCTCCGGCGGCGGTGTATCAAGGGCATGATCTGAATTTGGGATTTGGGGCGGCGGCGACGGTGGCGGGGGTGGAAAATGGTGGGCATGGGGGATTTGGGTGTTATATACCGAATTTGATGCCGTACTCCGGTCGGGACGCGGCGGCGTCGGCGGCGCTGGAGGAGAATTCCGGTGGGGGTAATAATGGGTATTGGAATGGGATGTTTAATGGAGGGCCGTGGTAGAGATATTAGAGAGAGATTTATGAGAAGTAAGTTAATTACATGGGTCATATTAAATTTTATTATATGAATTTAATGTTTCCTTTCTGATTGTTATTTCTCTCTTTGGTTTTTTACTATGTAATTTTCATTTTTTTCTTTTTGGATTTAGACGTGTTTTGGTTTGCTTTTGTTTGATGCTTTGTACTTTAACAAAAAAAAAAAAAAAAACTTGGCTAACAAAATGCCTTATATGTGTGATTAATTTTCTCATTATTTCTCTGGATCTTTCGCGCAAACAATTTGAATATAATTTGACTAGTTACCATATTTTCAATTGTTAAATAGTCTTCTATATTTCTTT

Coding sequence (CDS)

ATGGAACAAATGATGGAGTCCGGCAGCGGCGGAGGGATCAGGCCGCCGGCAAAGGGGAAGCCTCAAGAACAATTGAACTGCCCAAGGTGCAAATCAAGCAACACCAAATTTTGTTATTACAATAATTATAGCCTTACTCAGCCGAGGTATTTTTGTAAATCTTGCCGCCGGTATTGGACCGAGGGCGGTTCTCTGAGAAACATCCCGGTCGGAGGAGGCTCCCGGAAGAATAGGAAATCGTCCGGTTCAGGAGTTGGGTCCGGTTCAGGCCAGCCGGCTCCGGCGGCGGTGTATCAAGGGCATGATCTGAATTTGGGATTTGGGGCGGCGGCGACGGTGGCGGGGGTGGAAAATGGTGGGCATGGGGGATTTGGGTGTTATATACCGAATTTGATGCCGTACTCCGGTCGGGACGCGGCGGCGTCGGCGGCGCTGGAGGAGAATTCCGGTGGGGGTAATAATGGGTATTGGAATGGGATGTTTAATGGAGGGCCGTGGTAG

Protein sequence

MEQMMESGSGGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPAPAAVYQGHDLNLGFGAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW

Homology

[Close]

BLAST of Sed0008625 vs. NCBI nr
Match: XP_022980851.1 (dof zinc finger protein 2-like [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 2.3e-60
Identity = 128/180 (71.11%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 1   MEQMMESGS-------GGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK 60
           ME MM+SGS       GGG    AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCK
Sbjct: 1   MEAMMQSGSGSGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCK 60

Query: 61  SCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPAPAAVYQGHDLNLGF------ 120
           SCRRYWTEGGSLRNIPVGGGSRKNRK + S  GS S   AP  VYQ HDLNLGF      
Sbjct: 61  SCRRYWTEGGSLRNIPVGGGSRKNRKPAASVTGSASANHAPQPVYQAHDLNLGFPTTTTT 120

Query: 121 -GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
             AAA  AG+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 TAAAAAAAGIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 174

[Close]

BLAST of Sed0008625 vs. NCBI nr
Match: XP_016898925.1 (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo] >KAA0048874.1 dof zinc finger protein DOF3.7 [Cucumis melo var. makuwa] >TYK20825.1 dof zinc finger protein DOF3.7 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 5.1e-60
Identity = 129/178 (72.47%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MEQMMES----------GSGGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60
           ME MMES          G GGG     KG+PQEQLNCPRCKSSNTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGS---GQPAPAAVYQGHDLNLGF 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRK +GS  GSGS    QP P  VYQ  DLNLGF
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQP-QVYQAQDLNLGF 120

Query: 121 GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGP 166
             A     +ENGGHGGFGCYIPNLMPYSGR+   +AA+EENS  GNNGYWNGMF GGP
Sbjct: 121 ATAEATTAMENGGHGGFGCYIPNLMPYSGRE---TAAVEENS--GNNGYWNGMFGGGP 172

[Close]

BLAST of Sed0008625 vs. NCBI nr
Match: XP_022924713.1 (dof zinc finger protein 2-like [Cucurbita moschata])

HSP 1 Score: 240.7 bits (613), Expect = 8.8e-60
Identity = 128/172 (74.42%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 1   MEQMMESGSGGGIRP--PAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRY 60
           ME MM+SGSGGG      AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRY
Sbjct: 1   MEAMMQSGSGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRY 60

Query: 61  WTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPA-PAAVYQGHDLNLGF---GAAATVA 120
           WTEGGSLRNIPVGGGSRKNRK   S  GS S   A P  VYQ HDLNLGF    AAA  A
Sbjct: 61  WTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAA 120

Query: 121 GVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
           G+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 GIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 166

[Close]

BLAST of Sed0008625 vs. NCBI nr
Match: KAG6582682.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.8 bits (608), Expect = 3.3e-59
Identity = 128/179 (71.51%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 1   MEQMMESGSGGGIRP--------PAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFC 60
           ME MM+SGSGGG            AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPA-PAAVYQGHDLNLGF---- 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRK   S  GS S   A P  VYQ HDLNLGF    
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
            AAA  AG+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 AAAAAAAGIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 173

[Close]

BLAST of Sed0008625 vs. NCBI nr
Match: KAG7019080.1 (Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.4 bits (607), Expect = 4.4e-59
Identity = 128/178 (71.91%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 1   MEQMMESGSGGGIRP--------PAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFC 60
           ME MM+SGSGGG            AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFC
Sbjct: 1   MEAMMQSGSGGGGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFC 60

Query: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPA-PAAVYQGHDLNLGF---G 120
           KSCRRYWTEGGSLRNIPVGGGSRKNRK   S  GS S   A P  VYQ HDLNLGF    
Sbjct: 61  KSCRRYWTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTT 120

Query: 121 AAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
           AAA  AG+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 AAAAAAGIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 172

[Close]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 18  KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 77
           K +PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 78  RKSSGS 84
           ++SS S
Sbjct: 133 KRSSSS 138

[Close]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 8   GSGGGIRPPA-----KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEG 67
           GSGG     A     K +PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEG
Sbjct: 52  GSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEG 111

Query: 68  GSLRNIPVGGGSRKNRKSS 82
           GSLRN+PVGG SRKN++SS
Sbjct: 112 GSLRNVPVGGSSRKNKRSS 130

[Close]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 7   SGSGGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLR 66
           +G+G G    A+ + ++ LNCPRC S+NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLR
Sbjct: 62  AGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLR 121

Query: 67  NIPVGGGSRKNRKSSGSGVGSGSGQPAPAAVYQG 101
           N+PVGGGSRKN++SS S V S +   + +A   G
Sbjct: 122 NVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSG 155

[Close]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.2e-28
Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 8   GSGGGIRPPAKG-----------KPQEQ--LNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 67
           G GGG  PP  G           +PQ++  LNCPRC S+NTKFCYYNNYSL QPRYFCK+
Sbjct: 48  GGGGGGAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKT 107

Query: 68  CRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPAPAA 97
           CRRYWTEGGSLRN+PVGGGSRKN++SS S   + S  PA A+
Sbjct: 108 CRRYWTEGGSLRNVPVGGGSRKNKRSSSS---AASASPASAS 146

[Close]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot
Match: Q9M161 (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 20  KPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRK 79
           +PQE  NCPRC SSNTKFCYYNNYSL QPRY CKSCRRYWTEGGSLRN+PVGGGSRKN+K
Sbjct: 63  RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK 122

[Close]

BLAST of Sed0008625 vs. ExPASy TrEMBL
Match: A0A6J1IUS0 (dof zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480120 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 128/180 (71.11%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 1   MEQMMESGS-------GGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCK 60
           ME MM+SGS       GGG    AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCK
Sbjct: 1   MEAMMQSGSGSGGGGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCK 60

Query: 61  SCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPAPAAVYQGHDLNLGF------ 120
           SCRRYWTEGGSLRNIPVGGGSRKNRK + S  GS S   AP  VYQ HDLNLGF      
Sbjct: 61  SCRRYWTEGGSLRNIPVGGGSRKNRKPAASVTGSASANHAPQPVYQAHDLNLGFPTTTTT 120

Query: 121 -GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
             AAA  AG+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 TAAAAAAAGIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 174

[Close]

BLAST of Sed0008625 vs. ExPASy TrEMBL
Match: A0A5A7U0P5 (Dof zinc finger protein DOF3.7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00870 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 129/178 (72.47%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MEQMMES----------GSGGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60
           ME MMES          G GGG     KG+PQEQLNCPRCKSSNTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGS---GQPAPAAVYQGHDLNLGF 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRK +GS  GSGS    QP P  VYQ  DLNLGF
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQP-QVYQAQDLNLGF 120

Query: 121 GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGP 166
             A     +ENGGHGGFGCYIPNLMPYSGR+   +AA+EENS  GNNGYWNGMF GGP
Sbjct: 121 ATAEATTAMENGGHGGFGCYIPNLMPYSGRE---TAAVEENS--GNNGYWNGMFGGGP 172

[Close]

BLAST of Sed0008625 vs. ExPASy TrEMBL
Match: A0A1S4DT96 (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 129/178 (72.47%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MEQMMES----------GSGGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60
           ME MMES          G GGG     KG+PQEQLNCPRCKSSNTKFCYYNNYSLTQPRY
Sbjct: 1   MEAMMESGGNGGGGGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRY 60

Query: 61  FCKSCRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGS---GQPAPAAVYQGHDLNLGF 120
           FCK+CRRYWTEGGSLRNIPVGGGSRKNRK +GS  GSGS    QP P  VYQ  DLNLGF
Sbjct: 61  FCKACRRYWTEGGSLRNIPVGGGSRKNRKPTGSVSGSGSVHHPQPQP-QVYQAQDLNLGF 120

Query: 121 GAAATVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGP 166
             A     +ENGGHGGFGCYIPNLMPYSGR+   +AA+EENS  GNNGYWNGMF GGP
Sbjct: 121 ATAEATTAMENGGHGGFGCYIPNLMPYSGRE---TAAVEENS--GNNGYWNGMFGGGP 172

[Close]

BLAST of Sed0008625 vs. ExPASy TrEMBL
Match: A0A6J1ED97 (dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432129 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.2e-60
Identity = 128/172 (74.42%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 1   MEQMMESGSGGGIRP--PAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRY 60
           ME MM+SGSGGG      AKG+PQEQLNCPRCKS+NTKFCYYNNYSLTQPRYFCKSCRRY
Sbjct: 1   MEAMMQSGSGGGGGGGFKAKGRPQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRY 60

Query: 61  WTEGGSLRNIPVGGGSRKNRKSSGSGVGSGSGQPA-PAAVYQGHDLNLGF---GAAATVA 120
           WTEGGSLRNIPVGGGSRKNRK   S  GS S   A P  VYQ HDLNLGF    AAA  A
Sbjct: 61  WTEGGSLRNIPVGGGSRKNRKPPASVTGSASANHAPPQQVYQAHDLNLGFPTTTAAAAAA 120

Query: 121 GVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGPW 167
           G+ENGGHGGFG YIPNLMPY  RD     A+EEN   G+NGYWNGMF+GGPW
Sbjct: 121 GIENGGHGGFGFYIPNLMPYPARD----TAVEENP--GSNGYWNGMFSGGPW 166

[Close]

BLAST of Sed0008625 vs. ExPASy TrEMBL
Match: A0A0A0L5U8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.1e-59
Identity = 129/175 (73.71%), Postives = 136/175 (77.71%), Query Frame = 0


Query: 1   MEQMMESGS------GGGIRPPAKGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60
           ME MMESG+      GGG     KG+PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MEAMMESGANGGGGGGGGGGLKGKGRPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNIPVGGGSRKNRKSSGSGVGSGS---GQPAPAAVYQGHDLNLGFGAAA 120
           CRRYWTEGGSLRNIPVGGGSRKNRK  GS  GSGS    QP P  VYQ  DLNLGF   A
Sbjct: 61  CRRYWTEGGSLRNIPVGGGSRKNRKPHGSVSGSGSVHHPQPQP-QVYQAQDLNLGFATTA 120

Query: 121 -TVAGVENGGHGGFGCYIPNLMPYSGRDAAASAALEENSGGGNNGYWNGMFNGGP 166
                ++NGGHGGFGCYIPNLMPYSGR+   +AA+EENS  GNNGYWNGMF GGP
Sbjct: 121 EATTAMDNGGHGGFGCYIPNLMPYSGRE---TAAVEENS--GNNGYWNGMFGGGP 169

[Close]

BLAST of Sed0008625 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-29
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 18  KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 77
           K +PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 61  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 120

Query: 78  RKSSGS 84
           ++SS S
Sbjct: 121 KRSSSS 126

[Close]

BLAST of Sed0008625 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-29
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 18  KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKN 77
           K +PQE+LNCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 78  RKSSGS 84
           ++SS S
Sbjct: 133 KRSSSS 138

[Close]

BLAST of Sed0008625 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 8   GSGGGIRPPA-----KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEG 67
           GSGG     A     K +PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEG
Sbjct: 52  GSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEG 111

Query: 68  GSLRNIPVGGGSRKNRKSS 82
           GSLRN+PVGG SRKN++SS
Sbjct: 112 GSLRNVPVGGSSRKNKRSS 130

[Close]

BLAST of Sed0008625 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 8   GSGGGIRPPA-----KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEG 67
           GSGG     A     K +PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEG
Sbjct: 40  GSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEG 99

Query: 68  GSLRNIPVGGGSRKNRKSS 82
           GSLRN+PVGG SRKN++SS
Sbjct: 100 GSLRNVPVGGSSRKNKRSS 118

[Close]

BLAST of Sed0008625 vs. TAIR 10
Match: AT3G61850.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 8   GSGGGIRPPA-----KGKPQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEG 67
           GSGG     A     K +PQE++NCPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTEG
Sbjct: 40  GSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEG 99

Query: 68  GSLRNIPVGGGSRKNRKSS 82
           GSLRN+PVGG SRKN++SS
Sbjct: 100 GSLRNVPVGGSSRKNKRSS 118

The following BLAST results are available for this feature:

BLAST of Sed0008625 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980851.1	2.3e-60	71.11	dof zinc finger protein 2-like [Cucurbita maxima]	[more]
XP_016898925.1	5.1e-60	72.47	PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo] >KAA0048874.1 dof zinc ...	[more]
XP_022924713.1	8.8e-60	74.42	dof zinc finger protein 2-like [Cucurbita moschata]	[more]
KAG6582682.1	3.3e-59	71.51	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019080.1	4.4e-59	71.91	Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Sed0008625 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPY0	1.4e-28	83.33	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
Q43385	1.9e-28	73.42	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
B9F1L8	2.4e-28	62.77	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9SXG8	9.2e-28	62.75	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q9M161	1.0e-26	86.67	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]

BLAST of Sed0008625 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUS0	1.1e-60	71.11	dof zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480120 PE=4 ...	[more]
A0A5A7U0P5	2.5e-60	72.47	Dof zinc finger protein DOF3.7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DT96	2.5e-60	72.47	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103483169 PE=4 SV=1	[more]
A0A6J1ED97	4.2e-60	74.42	dof zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432129 PE=...	[more]
A0A0A0L5U8	2.1e-59	73.71	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119420 PE...	[more]

BLAST of Sed0008625 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46590.1	1.0e-29	83.33	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	1.0e-29	83.33	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	1.3e-29	73.42	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	1.3e-29	73.42	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.3	1.3e-29	73.42	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 23..79 e-value: 4.4E-33 score: 113.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 27..63
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 25..79 score: 28.900547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..93
None	No IPR available	PANTHER	PTHR31992:SF161	DOF ZINC FINGER PROTEIN DOF3.5-LIKE	coord: 18..91
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 18..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008625.1	Sed0008625.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding