Sed0008412 (gene) Chayote v1

Overview


Name	Sed0008412
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reticulon-like protein
Location	LG13: 691875 .. 694781 (-)
RNA-Seq Expression	Sed0008412
Synteny	Sed0008412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAGCCGGATTCCATCATCGACAAGATCGCCGACAAGATCTCCGATCACATTTCATCGTCTTCGTCCGACTCCGATGACGACCGATCTTCCAAAGTCCAAGCTGTTAAATCAAAAGTTTTCAGGCTCTTCGGTAGAGATAAGCCCGTCCACTCGTTCTTGGGCGGTGGAAAGCGTAATTTCTGATCTCTATATATCTATCTCTCGTCTTTGATCGGTTAATGTTGAAATTGTTTTTGAAGAATCGATGAATTTATAAGTTTTGGATCATGCTTTGGCATTCTTAACGATTCAATGAATCTCTATGTTTCTACATTGTTATTATTGATATGATCTTGTTTGAGTTCGTGAAATTTTTCGTTCGATTGGATGAATGCCCAATGTTACAATGGATAGCGTATTTTTCTCTTGTTTTTTCCATTGAGTAATATGTGTGAAAACCTTAGGTTATTTAGCGCTTATAATTTTATATTTTGTGGTTTCAGTTAGATCTTGATTCAGGAAATGACTCGGTTTCTCCAATTGGCTGAGTAAAATATTGCTAACACTCAGTTTCTCTAAGTTTTATAGCTTTATTTATTAACAGGGTAACCGCTGTGTTTATATTTAAAAAAAAAAGACTTATTGTGTTTACATTTGAGACTTTAAGAATATTGTAGTTGACGTGATAAACGGCCGCCGAGGGAGAAGGGCTTAGTTATTTCAAGCATATCTATTGAAACTGAAAGCCCGCGTGTATTAAAAGGTTTTATTTCAAAATCAATTAGTGATGAGATGAGTAATCTATCTATCTTGTAAATGTTAGGAGGTTTTCTCGCTTTTTTAATGTGGAGTCCTCAACGTGCCCCCTTCAAGATGGCGTTGCTTAGAGCTAATCAATCTTGGATCTGATTTCAAATTCATTTTTATTTGATCGAATATCCATTTTGGTTTAAAGTGTTTTGATACTATATTAGATAATGAGAAGGTCAGAGAATATTGAGAGGTAGAGGAAGAAGCCATGGTTGGCAAAATGGAGAATTGAGAGAAAAGTTTTCATTATAGGAAAGGGTAGAAGCTACATCTTGTGCCACACCCATTATAACATAACTGTATATAGCGGAACACAAACATCAACCGCCTGTTCTAACCTAAGGAGCCCAATGGATCTTAGGTAATATTATTGACTAAAGATGACTAACATAACAATAATTGTATACTAATCTAATATTAGTATGCTAATACTCTAACTGATAACATGAGATTCTATTTCAAAATTAATTGGTGATAGCCATAAGAGGAGCAGGTCACCTGTTTTATAAATGAAAACTTTTGGGTCAGACAGTATATCCGTGGCATTAATCGAGTTGTATGCAAGCTAACCCAAACAATCACGAATATAAAGGAAAAAACATTGCAGAAGTATGCCTTTATACAGTTCTACCCCTCACCAGTACTTTTCTTGCAAGTTATAATTACTTCCTGTTGCAGCTGCTGATGTTGTTCTTTGGAGGAACAAGAAGATCTCTGCAGGAGTTCTCGGGGGTGCCACCGCCTTGTGGGTTCTGTTCGAGCTGCTTGAGTACCAATTAATCACTCTCGTGTGCCATATATTAATTGTTTTAATGGCTATAATTTTCTCGTGGTCTTATGCGAATACGTTTATCAACAAGTAAGGACTTCGACTTACAAAATCGAATGCAATATAATATAGTCTGTTGGTTTTGTTTTTATGTGTTTTGTTTTTCTTCTTTTATAATTATATTTTTTGTGTTGTGAATGTAGGACCCCGCCTAAAATCCCAGATGTTAGACTCCGGGAAGATTACTTGCTTCAAGTTGTTTCTGCAATGAGAGTCGAAATCAACAATGCAATCTCCACTTTACGTGATATTGCTTGTGGGAGAGATTTGAAGAAGTTTCTCAGTGTATGTTCACTGCTACTATCTAGTATCTCAGGAGTAAATATGTTTTAGAGGGGAGAGGGTCAAAAGAAACATTTGAAGTAAGAGTGATTTTGGTTCGATTTTTGTTAGTTTTGTGCCAAACTGACTATCGACCGATATTCTCAAATTTTTCAACAATTGGGTCCGAACCAATGTCCAATAAAGGATAAAACCATTAGGTCGATTTTTATTTAGTTTGGTTTTCAATTTTGATCCCAATGAGAATTTGATTAGTTATTCACTATTTCGTCTCATTTCTAAACTTGTAATTCTTTCAAATCTTAATACCGATATATTTTGACTTTCCTTTAGAATTTATATGTTTGGTTCGATTTTTATGTTGGTTCTTCCATAAAAAACTAAATCGAACCAACATATATTTCAGATTTTTAAAATATTAAACTGAATGATCCAATATTGTTATAAAAAATTGAAGTGATCGATTGAATTGGTTCGGTTTTGTCGGGTTTTCCTTTCGCCCCTAGTTTCTAGGCTCGGTCATATATTGGAAATAACATTTTTTTTATTGTTACTGCAACTTTATGTCTTCATCATTTTGCTATTTATTACTCTGGTAATGTTAGTGAAGATCTCTGATGCCATTAACAGGCTTTTATTGGCTTATGGGTTCTATCAGTAGTAGGCAGTTGGTTCAACTTTCTGACTTTGGTATACATATGTAAGAAACTCTACTCTCTCAACTATTAGGCTGAGAAATCATGCCCAAATCACCAAACATTTTGCATTTATAACTGAAATTACATGCTGACATGTCCTTATATTGCTCTGCTATTGGTTCATGAAAATCAGGCTTTGTATTGGCACACACTGTACCAGTCCTCTATGAGAAGTATGATGACCAGATTGACCCAATTGCTGAGAAGGCCTTGATAGAGTTCAAAAAGCAATATGCTGTATTTGATGCCAAAGTTCTGAGTAAAATCCCCATGGTGCCCCTTCAAGAGAAGAAGAGGAATTAG

mRNA sequence

ATGGCCGAGCCGGATTCCATCATCGACAAGATCGCCGACAAGATCTCCGATCACATTTCATCGTCTTCGTCCGACTCCGATGACGACCGATCTTCCAAAGTCCAAGCTGTTAAATCAAAAGTTTTCAGGCTCTTCGGTAGAGATAAGCCCGTCCACTCGTTCTTGGGCGGTGGAAAGCCTGCTGATGTTGTTCTTTGGAGGAACAAGAAGATCTCTGCAGGAGTTCTCGGGGGTGCCACCGCCTTGTGGGTTCTGTTCGAGCTGCTTGAGTACCAATTAATCACTCTCGTGTGCCATATATTAATTGTTTTAATGGCTATAATTTTCTCGTGGTCTTATGCGAATACGTTTATCAACAAGACCCCGCCTAAAATCCCAGATGTTAGACTCCGGGAAGATTACTTGCTTCAAGTTGTTTCTGCAATGAGAGTCGAAATCAACAATGCAATCTCCACTTTACGTGATATTGCTTGTGGGAGAGATTTGAAGAAGTTTCTCAGTGCTTTTATTGGCTTATGGGTTCTATCAGTAGTAGGCAGTTGGTTCAACTTTCTGACTTTGGTATACATATGCTTTGTATTGGCACACACTGTACCAGTCCTCTATGAGAAGTATGATGACCAGATTGACCCAATTGCTGAGAAGGCCTTGATAGAGTTCAAAAAGCAATATGCTGTATTTGATGCCAAAGTTCTGAGTAAAATCCCCATGGTGCCCCTTCAAGAGAAGAAGAGGAATTAG

Coding sequence (CDS)

ATGGCCGAGCCGGATTCCATCATCGACAAGATCGCCGACAAGATCTCCGATCACATTTCATCGTCTTCGTCCGACTCCGATGACGACCGATCTTCCAAAGTCCAAGCTGTTAAATCAAAAGTTTTCAGGCTCTTCGGTAGAGATAAGCCCGTCCACTCGTTCTTGGGCGGTGGAAAGCCTGCTGATGTTGTTCTTTGGAGGAACAAGAAGATCTCTGCAGGAGTTCTCGGGGGTGCCACCGCCTTGTGGGTTCTGTTCGAGCTGCTTGAGTACCAATTAATCACTCTCGTGTGCCATATATTAATTGTTTTAATGGCTATAATTTTCTCGTGGTCTTATGCGAATACGTTTATCAACAAGACCCCGCCTAAAATCCCAGATGTTAGACTCCGGGAAGATTACTTGCTTCAAGTTGTTTCTGCAATGAGAGTCGAAATCAACAATGCAATCTCCACTTTACGTGATATTGCTTGTGGGAGAGATTTGAAGAAGTTTCTCAGTGCTTTTATTGGCTTATGGGTTCTATCAGTAGTAGGCAGTTGGTTCAACTTTCTGACTTTGGTATACATATGCTTTGTATTGGCACACACTGTACCAGTCCTCTATGAGAAGTATGATGACCAGATTGACCCAATTGCTGAGAAGGCCTTGATAGAGTTCAAAAAGCAATATGCTGTATTTGATGCCAAAGTTCTGAGTAAAATCCCCATGGTGCCCCTTCAAGAGAAGAAGAGGAATTAG

Protein sequence

MAEPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQEKKRN

Homology

[Close]

BLAST of Sed0008412 vs. NCBI nr
Match: XP_038878127.1 (reticulon-like protein B5 [Benincasa hispida])

HSP 1 Score: 394.8 bits (1013), Expect = 5.4e-106
Identity = 202/244 (82.79%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           EPDS+IDKI+ KI+DHISSSSS SDDDR SKV AVKS V+RLFGRDKPVHS LGGGKPAD
Sbjct: 7   EPDSVIDKISGKINDHISSSSSGSDDDRPSKVDAVKSHVYRLFGRDKPVHSVLGGGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAGVLGG TALW LFELLEYQLITLVCHILI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGVLGGVTALWFLFELLEYQLITLVCHILILLLAIVFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPD R+ ED LL+VVS++R+EIN+ ISTLRDIA GRDLKKFLSAFIGLWVLS+VG+W 
Sbjct: 127 PQIPDFRVPEDCLLEVVSSLRIEINHVISTLRDIAFGRDLKKFLSAFIGLWVLSIVGNWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI FVL HTVPVLYEKY+DQ+DPIAEKALIE KKQYAVFDAKVLSKIPM PLQ 
Sbjct: 187 NFLTLLYISFVLLHTVPVLYEKYEDQVDPIAEKALIELKKQYAVFDAKVLSKIPMWPLQG 246

Query: 243 KKRN 247
           KK+N
Sbjct: 247 KKKN 250

[Close]

BLAST of Sed0008412 vs. NCBI nr
Match: XP_004149448.1 (reticulon-like protein B1 [Cucumis sativus] >KGN57883.1 hypothetical protein Csa_010794 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 3.3e-103
Identity = 192/245 (78.37%), Postives = 218/245 (88.98%), Query Frame = 0


Query: 2   AEPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPA 61
           AEPDS+ID  + KI DHISSSSSDSDDD  SK  AVK  V+RLFGRDKPVH+ LGGGKPA
Sbjct: 6   AEPDSVIDNFSAKIDDHISSSSSDSDDDHPSKPDAVKCHVYRLFGRDKPVHTVLGGGKPA 65

Query: 62  DVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKT 121
           DV LW+NKK SAGVLGGATALW+LFELLEYQLITLVCHILI+L+AI F WSYANTFINKT
Sbjct: 66  DVFLWKNKKNSAGVLGGATALWILFELLEYQLITLVCHILIILLAIPFLWSYANTFINKT 125

Query: 122 PPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSW 181
           PP+IPDVRL ED LLQVV+++R+EIN  ISTLRD+A GRDL+KFLSAF+GLW+LS+ GSW
Sbjct: 126 PPQIPDVRLPEDCLLQVVTSLRIEINRIISTLRDVASGRDLRKFLSAFLGLWILSIAGSW 185

Query: 182 FNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQ 241
            NFLTL+Y+CF+L HTVPVLYEKY+DQ+DP AEKALIE KKQYA FDAKVLSKIP+ PLQ
Sbjct: 186 CNFLTLLYMCFILLHTVPVLYEKYEDQVDPFAEKALIELKKQYAEFDAKVLSKIPLGPLQ 245

Query: 242 EKKRN 247
           EKK++
Sbjct: 246 EKKKD 250

[Close]

BLAST of Sed0008412 vs. NCBI nr
Match: XP_022968328.1 (reticulon-like protein B1 [Cucurbita maxima])

HSP 1 Score: 370.9 bits (951), Expect = 8.3e-99
Identity = 190/243 (78.19%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           E DS+IDKI+DKI D ISSSSSDSDD   SK+ AVKS+VFRLFGRDKPVH+ LGGGKPAD
Sbjct: 7   ERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLGGGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAG+LG ATALW++FEL+EYQLITLVCH+LI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPDV+L E   LQ VSA+R+EIN AIS LR IACGRDLKKFLS F+GLWVLSVVGSW 
Sbjct: 127 PQIPDVKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLSVVGSWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI  VL HTVPV YEKY+DQ+DP+AEKA IEFKKQYAVFDAKVLSKIP+  LQE
Sbjct: 187 NFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIPIGALQE 246

Query: 243 KKR 246
           KK+
Sbjct: 247 KKK 249

[Close]

BLAST of Sed0008412 vs. NCBI nr
Match: XP_022945796.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 369.8 bits (948), Expect = 1.9e-98
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           E DS+IDKI+DKI D ISSSSSDSDD   SK+ AVKS+VFRLFGRDKPVH+ LGGGKPAD
Sbjct: 7   ERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLGGGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAG+LG ATALW++FEL+EYQLITLVCH+LI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPD++L E   LQ VSA+R+EIN AIS LR IACGRDLKKFLS F+GLWVLSVVGSW 
Sbjct: 127 PQIPDMKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLSVVGSWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI  VL HTVPV YEKY+DQ+DP+AEKA IEFKKQYAVFDAKVLSKIP+  LQE
Sbjct: 187 NFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIPIGALQE 246

Query: 243 KKR 246
           KK+
Sbjct: 247 KKK 249

[Close]

BLAST of Sed0008412 vs. NCBI nr
Match: XP_023541342.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 9.2e-98
Identity = 188/243 (77.37%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           E DS+IDKI+DKI D ISSSSSDSDD   SK+ AVKS+VFRLFGRDKPVH+ LG GKPAD
Sbjct: 7   ERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLGAGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAG+LG ATALW++FEL+EYQLITLVCH+LI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPD++L E   LQ VSA+R+EIN AIS LR IACGRDLKKFLS F+GLWVLSVVGSW 
Sbjct: 127 PQIPDMKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLSVVGSWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI  VL HTVPV YEKY+DQ+DP+AEKA IEFKKQYAVFDAKVLSKIP+  LQE
Sbjct: 187 NFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIPIGALQE 246

Query: 243 KKR 246
           KK+
Sbjct: 247 KKK 249

[Close]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-82
Identity = 149/243 (61.32%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKP 60
           M + +S+++KIADKI DH SSSSSDS+ ++     A+K+K++RLFGR+KPVH  LGGG P
Sbjct: 9   MHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLP 68

Query: 61  ADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINK 120
           ADV LWR+KK+SA VLG ATA+WVLFEL+EY  ++LVCHILI  +A +F  S A+ F+NK
Sbjct: 69  ADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNK 128

Query: 121 TPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGS 180
           TPPKIP++ ++E++ L +VSA+R E+N A   LR IA GRDLKKFL    GLW++SVVG+
Sbjct: 129 TPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGN 188

Query: 181 WFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPL 240
           WFNFLTLVYICFV+ HTVP+LYEK++D++DP+AEK L E KK Y VFD KVLSK+P+  L
Sbjct: 189 WFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASL 248

Query: 241 QEK 244
           + K
Sbjct: 249 KAK 251

[Close]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.4e-80
Identity = 149/256 (58.20%), Postives = 199/256 (77.73%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKI---SDHISSSSSDSDDDRSSKVQ-------AVKSKVFRLFGRDKP 60
           + E +S++DKI++KI    D  SSSSS  D+D   K +       ++KSKV+RLFGR++P
Sbjct: 20  VVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQP 79

Query: 61  VHSFLGGGKPADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFS 120
           VH  LGGGKPAD+ +W+NKK+S GVLGGATA WV+FEL+EY L+TL+CH++IV++A++F 
Sbjct: 80  VHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFL 139

Query: 121 WSYANTFINKTPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFI 180
           WS A  FINK+PPKIP+V + E+ +LQ+ S +R+EIN   S+LR+IA GRDLKKFL A  
Sbjct: 140 WSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIA 199

Query: 181 GLWVLSVVGSWFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAK 240
           GLWVLS++G  FNFLTL YI  VL  TVP+ Y+KY+D++DP+ EKA+IE KKQYAV D K
Sbjct: 200 GLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEK 259

Query: 241 VLSKIPMVPLQEKKRN 247
           VLSKIP+ PL+ KK++
Sbjct: 260 VLSKIPLGPLKNKKKD 275

[Close]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.8e-78
Identity = 142/241 (58.92%), Postives = 192/241 (79.67%), Query Frame = 0


Query: 5   DSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPADVV 64
           +S+++KI++KI  H SSSSS+S+ ++     AVK+K++R+FGR+KPVH  LGGGKPADV 
Sbjct: 13  ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 65  LWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTPPK 124
           LWR+KK+S  VLG ATA+WVLFEL+EY L++L+CHI I+ +  +F WS A+T INKT P+
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 125 IPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWFNF 184
           IP++ + E+  L V S++R E+N A   LR IA GRDLKKFL   +GLW++SVVG+WFNF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 185 LTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQEKK 244
           LTLVYICFV+ HTVP+LYEK++D++DP+AEKA+ E +KQY VFD KVLSKIP+  L+ K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 245 R 246
           +
Sbjct: 253 K 253

[Close]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.3e-77
Identity = 142/252 (56.35%), Postives = 198/252 (78.57%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKI---SDHISSSSSDSDDDR---SSKVQAVKSKVFRLFGRDKPVHSF 60
           + E +S+++K+++KI    D  SSSSSD ++++   SS  +++KSKV+RLFGR++PVH  
Sbjct: 20  VVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKV 79

Query: 61  LGGGKPADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYA 120
           LGGGKPAD+ +W++KK+S GV GGAT  WVLFEL+EY L+TL+CH++IV +A++F WS A
Sbjct: 80  LGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNA 139

Query: 121 NTFINKTPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWV 180
             FI+K+PPKIP+V + E+ LLQ+ S +R+EIN  IS+LR+IA GRD+KKFLSA  GLWV
Sbjct: 140 TMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWV 199

Query: 181 LSVVGSWFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSK 240
           LS++G  ++FLTL YI  VL  TVP+ Y+KY+D++D   EKA+ E KKQYAV DAKV SK
Sbjct: 200 LSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSK 259

Query: 241 IPMVPLQEKKRN 247
           IP  PL++KK++
Sbjct: 260 IPRGPLKDKKKD 271

[Close]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.0e-71
Identity = 139/233 (59.66%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 5   DSIIDKIADKISDH--ISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 64
           +SI++KI++KI  H   SSSSSDSDDD++S   ++K+K++RLFGR++P+H   GGGKPAD
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNS--ASLKTKIYRLFGREQPLHKLFGGGKPAD 68

Query: 65  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 124
           + LWRNKK+S GVLG AT  W+LFELLEY L+TL  HI I+ +A++F WS A+TFI+K+P
Sbjct: 69  IFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSP 128

Query: 125 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 184
             IP+V + ED +LQ+ S +R+EIN   + LRDIA GRDLKKFL    GLWVLS VGS  
Sbjct: 129 LHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSC 188

Query: 185 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKI 236
           NFLTL+YI  VL  T+PVLYEKY+D++D   EKA+ E KKQY  FD KVLSK+
Sbjct: 189 NFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239

[Close]

BLAST of Sed0008412 vs. ExPASy TrEMBL
Match: A0A0A0L7V4 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.6e-103
Identity = 192/245 (78.37%), Postives = 218/245 (88.98%), Query Frame = 0


Query: 2   AEPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPA 61
           AEPDS+ID  + KI DHISSSSSDSDDD  SK  AVK  V+RLFGRDKPVH+ LGGGKPA
Sbjct: 6   AEPDSVIDNFSAKIDDHISSSSSDSDDDHPSKPDAVKCHVYRLFGRDKPVHTVLGGGKPA 65

Query: 62  DVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKT 121
           DV LW+NKK SAGVLGGATALW+LFELLEYQLITLVCHILI+L+AI F WSYANTFINKT
Sbjct: 66  DVFLWKNKKNSAGVLGGATALWILFELLEYQLITLVCHILIILLAIPFLWSYANTFINKT 125

Query: 122 PPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSW 181
           PP+IPDVRL ED LLQVV+++R+EIN  ISTLRD+A GRDL+KFLSAF+GLW+LS+ GSW
Sbjct: 126 PPQIPDVRLPEDCLLQVVTSLRIEINRIISTLRDVASGRDLRKFLSAFLGLWILSIAGSW 185

Query: 182 FNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQ 241
            NFLTL+Y+CF+L HTVPVLYEKY+DQ+DP AEKALIE KKQYA FDAKVLSKIP+ PLQ
Sbjct: 186 CNFLTLLYMCFILLHTVPVLYEKYEDQVDPFAEKALIELKKQYAEFDAKVLSKIPLGPLQ 245

Query: 242 EKKRN 247
           EKK++
Sbjct: 246 EKKKD 250

[Close]

BLAST of Sed0008412 vs. ExPASy TrEMBL
Match: A0A6J1HXQ1 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467592 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.0e-99
Identity = 190/243 (78.19%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           E DS+IDKI+DKI D ISSSSSDSDD   SK+ AVKS+VFRLFGRDKPVH+ LGGGKPAD
Sbjct: 7   ERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLGGGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAG+LG ATALW++FEL+EYQLITLVCH+LI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPDV+L E   LQ VSA+R+EIN AIS LR IACGRDLKKFLS F+GLWVLSVVGSW 
Sbjct: 127 PQIPDVKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLSVVGSWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI  VL HTVPV YEKY+DQ+DP+AEKA IEFKKQYAVFDAKVLSKIP+  LQE
Sbjct: 187 NFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIPIGALQE 246

Query: 243 KKR 246
           KK+
Sbjct: 247 KKK 249

[Close]

BLAST of Sed0008412 vs. ExPASy TrEMBL
Match: A0A6J1G1W3 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449937 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.0e-99
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           E DS+IDKI+DKI D ISSSSSDSDD   SK+ AVKS+VFRLFGRDKPVH+ LGGGKPAD
Sbjct: 7   ERDSVIDKISDKIGDCISSSSSDSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLGGGKPAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAG+LG ATALW++FEL+EYQLITLVCH+LI+L+AI+F WSYANTFINKTP
Sbjct: 67  VFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANTFINKTP 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P+IPD++L E   LQ VSA+R+EIN AIS LR IACGRDLKKFLS F+GLWVLSVVGSW 
Sbjct: 127 PQIPDMKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLSVVGSWC 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTL+YI  VL HTVPV YEKY+DQ+DP+AEKA IEFKKQYAVFDAKVLSKIP+  LQE
Sbjct: 187 NFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIPIGALQE 246

Query: 243 KKR 246
           KK+
Sbjct: 247 KKK 249

[Close]

BLAST of Sed0008412 vs. ExPASy TrEMBL
Match: A0A6J1CGS9 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111011386 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.4e-96
Identity = 187/244 (76.64%), Postives = 211/244 (86.48%), Query Frame = 0


Query: 3   EPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 62
           EPDS+I KI++KI    SSSSSDSDDD+ SK+ A KS+V RLFGR+KPV+  LGGGK AD
Sbjct: 7   EPDSVIGKISEKIDALHSSSSSDSDDDKPSKLDAAKSRVRRLFGREKPVYEVLGGGKHAD 66

Query: 63  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 122
           V LWRNKK SAGVLGGATALW+LFELLEYQLITLVCHILI+ +A+IF WS ANTFINK+ 
Sbjct: 67  VFLWRNKKNSAGVLGGATALWILFELLEYQLITLVCHILILFLALIFVWSNANTFINKSS 126

Query: 123 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 182
           P IP++RL  D L +V + +R+EIN  ISTLRDIA GRDLKKFLSAFIGLWVLSVVGSWF
Sbjct: 127 PHIPEIRLNLDCLPEVANQLRIEINRVISTLRDIASGRDLKKFLSAFIGLWVLSVVGSWF 186

Query: 183 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQE 242
           NFLTLVYICFVL HTVPVLYEKY+DQ+DPIAEKALIE KKQYAVFDAKVLSKIP  PLQ+
Sbjct: 187 NFLTLVYICFVLLHTVPVLYEKYEDQVDPIAEKALIELKKQYAVFDAKVLSKIPKGPLQQ 246

Query: 243 KKRN 247
            K++
Sbjct: 247 NKKD 250

[Close]

BLAST of Sed0008412 vs. ExPASy TrEMBL
Match: A0A6J1JBF9 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482938 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 181/242 (74.79%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 5   DSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPADVV 64
           DS+ DKI+ KI  + SSSSS SDDD+ SK+ AVKS VFRLFGRDKPVH+ LGGGKPADV+
Sbjct: 9   DSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68

Query: 65  LWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTPPK 124
           LWRNKK SAG+LGGATALW+LFELLEYQLITL+CHILI+++A++F+ SYA++FINK+PP+
Sbjct: 69  LWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASSFINKSPPQ 128

Query: 125 IPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWFNF 184
           IPD RL ED LL+VVSA+R+EIN+ IS LR+IA GRDLKKFL AFIGLWVLS+VGSW NF
Sbjct: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188

Query: 185 LTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQEKK 244
           LTL+Y   VL HTVPVLYEKYDDQ+D  AEKALIE KKQYAVF+A+VLSKIPM  LQEKK
Sbjct: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALQEKK 248

Query: 245 RN 247
           ++
Sbjct: 249 KD 250

[Close]

BLAST of Sed0008412 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.0e-83
Identity = 149/243 (61.32%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKP 60
           M + +S+++KIADKI DH SSSSSDS+ ++     A+K+K++RLFGR+KPVH  LGGG P
Sbjct: 9   MHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLP 68

Query: 61  ADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINK 120
           ADV LWR+KK+SA VLG ATA+WVLFEL+EY  ++LVCHILI  +A +F  S A+ F+NK
Sbjct: 69  ADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNK 128

Query: 121 TPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGS 180
           TPPKIP++ ++E++ L +VSA+R E+N A   LR IA GRDLKKFL    GLW++SVVG+
Sbjct: 129 TPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGN 188

Query: 181 WFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPL 240
           WFNFLTLVYICFV+ HTVP+LYEK++D++DP+AEK L E KK Y VFD KVLSK+P+  L
Sbjct: 189 WFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASL 248

Query: 241 QEK 244
           + K
Sbjct: 249 KAK 251

[Close]

BLAST of Sed0008412 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-81
Identity = 149/256 (58.20%), Postives = 199/256 (77.73%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKI---SDHISSSSSDSDDDRSSKVQ-------AVKSKVFRLFGRDKP 60
           + E +S++DKI++KI    D  SSSSS  D+D   K +       ++KSKV+RLFGR++P
Sbjct: 20  VVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQP 79

Query: 61  VHSFLGGGKPADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFS 120
           VH  LGGGKPAD+ +W+NKK+S GVLGGATA WV+FEL+EY L+TL+CH++IV++A++F 
Sbjct: 80  VHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFL 139

Query: 121 WSYANTFINKTPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFI 180
           WS A  FINK+PPKIP+V + E+ +LQ+ S +R+EIN   S+LR+IA GRDLKKFL A  
Sbjct: 140 WSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIA 199

Query: 181 GLWVLSVVGSWFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAK 240
           GLWVLS++G  FNFLTL YI  VL  TVP+ Y+KY+D++DP+ EKA+IE KKQYAV D K
Sbjct: 200 GLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEK 259

Query: 241 VLSKIPMVPLQEKKRN 247
           VLSKIP+ PL+ KK++
Sbjct: 260 VLSKIPLGPLKNKKKD 275

[Close]

BLAST of Sed0008412 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.7e-79
Identity = 142/241 (58.92%), Postives = 192/241 (79.67%), Query Frame = 0


Query: 5   DSIIDKIADKISDHISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPADVV 64
           +S+++KI++KI  H SSSSS+S+ ++     AVK+K++R+FGR+KPVH  LGGGKPADV 
Sbjct: 13  ESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 65  LWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTPPK 124
           LWR+KK+S  VLG ATA+WVLFEL+EY L++L+CHI I+ +  +F WS A+T INKT P+
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 125 IPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWFNF 184
           IP++ + E+  L V S++R E+N A   LR IA GRDLKKFL   +GLW++SVVG+WFNF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 185 LTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKIPMVPLQEKK 244
           LTLVYICFV+ HTVP+LYEK++D++DP+AEKA+ E +KQY VFD KVLSKIP+  L+ K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 245 R 246
           +
Sbjct: 253 K 253

[Close]

BLAST of Sed0008412 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 288.1 bits (736), Expect = 6.6e-78
Identity = 142/252 (56.35%), Postives = 198/252 (78.57%), Query Frame = 0


Query: 1   MAEPDSIIDKIADKI---SDHISSSSSDSDDDR---SSKVQAVKSKVFRLFGRDKPVHSF 60
           + E +S+++K+++KI    D  SSSSSD ++++   SS  +++KSKV+RLFGR++PVH  
Sbjct: 20  VVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKV 79

Query: 61  LGGGKPADVVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYA 120
           LGGGKPAD+ +W++KK+S GV GGAT  WVLFEL+EY L+TL+CH++IV +A++F WS A
Sbjct: 80  LGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNA 139

Query: 121 NTFINKTPPKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWV 180
             FI+K+PPKIP+V + E+ LLQ+ S +R+EIN  IS+LR+IA GRD+KKFLSA  GLWV
Sbjct: 140 TMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWV 199

Query: 181 LSVVGSWFNFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSK 240
           LS++G  ++FLTL YI  VL  TVP+ Y+KY+D++D   EKA+ E KKQYAV DAKV SK
Sbjct: 200 LSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSK 259

Query: 241 IPMVPLQEKKRN 247
           IP  PL++KK++
Sbjct: 260 IPRGPLKDKKKD 271

[Close]

BLAST of Sed0008412 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 )

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-72
Identity = 139/233 (59.66%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 5   DSIIDKIADKISDH--ISSSSSDSDDDRSSKVQAVKSKVFRLFGRDKPVHSFLGGGKPAD 64
           +SI++KI++KI  H   SSSSSDSDDD++S   ++K+K++RLFGR++P+H   GGGKPAD
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNS--ASLKTKIYRLFGREQPLHKLFGGGKPAD 68

Query: 65  VVLWRNKKISAGVLGGATALWVLFELLEYQLITLVCHILIVLMAIIFSWSYANTFINKTP 124
           + LWRNKK+S GVLG AT  W+LFELLEY L+TL  HI I+ +A++F WS A+TFI+K+P
Sbjct: 69  IFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSP 128

Query: 125 PKIPDVRLREDYLLQVVSAMRVEINNAISTLRDIACGRDLKKFLSAFIGLWVLSVVGSWF 184
             IP+V + ED +LQ+ S +R+EIN   + LRDIA GRDLKKFL    GLWVLS VGS  
Sbjct: 129 LHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSC 188

Query: 185 NFLTLVYICFVLAHTVPVLYEKYDDQIDPIAEKALIEFKKQYAVFDAKVLSKI 236
           NFLTL+YI  VL  T+PVLYEKY+D++D   EKA+ E KKQY  FD KVLSK+
Sbjct: 189 NFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239

The following BLAST results are available for this feature:

BLAST of Sed0008412 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878127.1	5.4e-106	82.79	reticulon-like protein B5 [Benincasa hispida]	[more]
XP_004149448.1	3.3e-103	78.37	reticulon-like protein B1 [Cucumis sativus] >KGN57883.1 hypothetical protein Csa...	[more]
XP_022968328.1	8.3e-99	78.19	reticulon-like protein B1 [Cucurbita maxima]	[more]
XP_022945796.1	1.9e-98	77.78	reticulon-like protein B1 [Cucurbita moschata]	[more]
XP_023541342.1	9.2e-98	77.37	reticulon-like protein B1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0008412 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DBN4	5.6e-82	61.32	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q9SUR3	2.4e-80	58.20	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
O82352	3.8e-78	58.92	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
Q9SUT9	9.3e-77	56.35	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SH59	2.0e-71	59.66	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of Sed0008412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7V4	1.6e-103	78.37	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1	[more]
A0A6J1HXQ1	4.0e-99	78.19	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467592 PE=4 SV=1	[more]
A0A6J1G1W3	9.0e-99	77.78	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449937 PE=4 SV=1	[more]
A0A6J1CGS9	2.4e-96	76.64	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111011386 PE=4 SV=1	[more]
A0A6J1JBF9	1.1e-93	74.79	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482938 PE=4 SV=1	[more]

BLAST of Sed0008412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61560.1	4.0e-83	61.32	Reticulon family protein	[more]
AT4G23630.1	1.7e-81	58.20	VIRB2-interacting protein 1	[more]
AT2G46170.1	2.7e-79	58.92	Reticulon family protein	[more]
AT4G11220.1	6.6e-78	56.35	VIRB2-interacting protein 2	[more]
AT1G64090.1	1.4e-72	59.66	Reticulan like protein B3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 61..216 e-value: 1.4E-57 score: 194.1
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 60..246 score: 47.619358
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 4..245
None	No IPR available	PANTHER	PTHR10994:SF158	RETICULON-LIKE PROTEIN	coord: 4..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008412.1	Sed0008412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane