Sed0008374 (gene) Chayote v1

Overview


Name	Sed0008374
Type	gene
Organism	Sechium edule (Chayote v1)
Description	sister chromatid cohesion 1 protein 3
Location	LG13: 7192260 .. 7197997 (-)
RNA-Seq Expression	Sed0008374
Synteny	Sed0008374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTACTCGCACACGTTGTTGGCGCGCAAAACGCCATTGGGAACCGTGTGGTGTGCAGCTCATTTGCAGCACCGTCTCAACAAGAAGGATTACCAAAACACCAAAATCCCTCTTGTTGTTGGTTAGTTTCGCTTTGTTCTTACTCTCTCTTTTTTTTTTTTATAATTTTTTTGTTCAGTGGAATGAGAGAAAATGTGTTTGAGTTTTCATTTGGGGTTTCTTTGGTGGTGGAAATTTTATGGATTTCATTGTTTTTGGGGGGTTTTTGTTGTCTCTGATGATGGGTTTTCTCTGTTATTGTTTTCAAGAACTTGTATGAGTTTCTTTGGTGATTGAAGTTTCAAAAGATGTATAGTGAATTCCTGTTTTGGAAATGGTGGGGTGAAAGGAACCATAGAATATTCAAAGATGAACAAATTTCCCTTGAATCCCTCACCGAAGCTACTATACATACTTGAATTCATTGAAGTCACATGATATCTCCTTTTTGTAACTATGATCTTTCTTTTTTATTTTCACATTGGCAACATCTTGTAAGGTTTCGAATGATGGATCTCATTGTAATATTCATTGATCAATGAAAGTTACCGTTTCCTATCAAAAAAAAAAATTATTTTAGCTTACAAATTTTGGTTTGATTTTGAAATATACAAATAAAATGTATATGTGAAAGTAATGAAAATCATATGTCCGAGTAGTAGTTGTAGGCTTAACTTTCAAAAACAAAAAACAAAAAGTTTTCAAACGGGGCCTAGAGTTTTTGTTCTCATGTGTGTCCAGTTTGATGCGAAGGTTTATTCAATTGAATGGGATTGAAATTTTAAAGATTTAATTATTTTTTAGATTTCTCATTCCGTTGAAGAAGGGTTTTCTCATAATTGTTTTCAAAATGTTGCTTTTCAAGAACATGTATGAGTTTTTGTAAGAGTGGCTGATCACTGATTCATGTCTGGCTTGTATCTCTCTATTGAAGATGCCATCATGTTTGGAGAGGTTCCTCTTGCCTTACGTACCTCAAGCTACCTTTTATTAGGCGTTGTGCGAATTTATTCGAAGCAAATCGATTATTTAAAGCATGATGTTGATGTTTTGGTGTTGGAGTTACGGAAAATGCATTCGCACGCTTCATCGAAACTCACTTTACCTGAGAATGCTTATCAAGCACCGTTTCATTCTATCACTCTTCCAGAGACGTTTGATCTCGATGCTCTAGAATTGGATATTGATGTTTACGATGATGGGTAATGTATCTAGATTACCAACTTTATGATTGATTTGAAATATTTCTCACACTAATGATTTTGTTCTTACAGAGATCCAGATACTCATACGAGTAGTCAGGAAGAGATCACTCTTGCAGGTTTAAACAGTGATTCCCTTTCACATTTGCCCACCCTCATTGTTTTACAGATTTAGAAACCAACTAAACTTTTTGCATTACAGATCAAATTTCTTTGGGAAGGGATACTTATGTAGCTATAACTTTCGATGAGGTTCTTTTTTATTATTATTATTGCATTAGTATTGTTTAGTATCCTTTATACTTTATCTAGGTTCATTGGTCATCATTATAAATTGCTTTATTTTACAGGATGTCATGATGGATTTATCACATCCTGGAGAACCTCCTGATTTGGGGTTTAAATCAATGGAAGAAGAGTAAGTTTCCCAGGCTTTCAAGGTCTTCTCATTTTTTCGATCACGTGAATAGACCACAACCAGGCTGATTGTTAGTGTTTCTTGTGTGTAGCGCGATTCTTCCACCTCATGTAGATACAACTATGGAAGACTTAATTGGTGATGAAGATGTACTTAACACGATACTTGATGAGGACATTATGCCACAAAGTTTTCGAGGAGTTGAAGTCCTTGAAGCTGTGAATTTTCAAGAATTTGATCCAAGTCATCAGAGTGTGCAAAAAGATGATGACTCTCCACAAAATGTTCCAGAAGTTGAAGTTCTACGAGAAGCTGCCCCTGATTTTAGTCCAAGAGATATTCCTATGGTGCCTCCACCTGGTGGTGATGGCACGTCCGAACCACATCGTCTTGTAGATGAAAATTTAAACCAAGAAAATCTTTTAATGGAAGATAATATAACTCTTCCAAAGACATCACTACCACTTGAGGGAAGCACAAGACCTTCAACTTCTCTTACTTCACAAGAGACACTTGATATGAACGATACACATATTTCATTTAGTAAGTTTAATTCTAATTGCTCCGTGTTTTTCGAAGTTGAATCTAATTGTTAGTGAATGAATAACAATATCTTGTTTTGGGGTGTTCTCTTCTTCGTGTGTTGCAGGACAATCTCCCATGGACTTTGTTCTTCAACCTACTCCTCCACAACAACCAAAGCCAAGATCAAGAAAGAGAAAACAGTTCTTTGACAAGTCTACAGTTCTTAGTAGCAAGTATGTTTGTGATATCTATCATTTAGGCCCTGTTTGATAACCATTTTTTTTTTTATGAAATTTAAGCCTATTTCTATTCAAATTTCCTACCATGTGCTCCATCTGTCCTACAATGTATCCATCTTTCCTTAAGAAAGTAGGAGAATACTAACTAAATCTCAAAACATAAACAAGTTTTTGGAAGTTACTTTTTTTTTTTTACAAATTTTGGTTTTGTTTATTAAAATATAGGTAAAATGTAGATATCCAAATAAGGAAAAAGGTATAGCAATGTAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAACGAAAACAAAATGGTTATCAAACGGGGCCTTAGCTTTTGTGTTTATTCTAATCGATTATTGACTTAGAAAGTTGTGTGTAGGTTTTTGAAAAAGGCTCTTGAAGATTCTAGCGATTTATTGTGTAAGAGGAGGAAATTACCATGCTCTTCTTTGGAGGTATGGAAGTTAAACAACTCCTTGAGAAAAGAAGAAGTTTTCTCACATCCTTTCATCACTGGTAAGTGGTATTTATCATAGTTTTTTTCTACTTGTTTATTCGTTGTTTTTATAGCGTAAAGAAATCAAATATCTATATGCAGGTCTTTGTCATGATCTCGATAATATTTTTAAGGAGGATTACATTATTAAAAAATGTCGTACAATATTAGTGGAGGAGGCTTCTGAGGATCTCGGTGATGATGCAAGAAATGTTGCTTCAACTAGTGAAACCTTTTTATGCCAAGAAGATGCACCATCTCCAGCTCCACAAGTTGCTTCTCCACCACATACTGAAATTCCACCCATCAATGACCCCTTTAGAAACATAGCTTCATCAGGCGAGACTTTCTCGCCGCTTGTAATTGCTTCATCTCCAACTGGAGAAGATGCTTCCTTGCCACATTTCAAAATTCCGCCTGCGGTCGATCCTTCTTCTTCCTTTTCTGACATGGAGATTGAACATCTTCGTAATGTTGAGGGCAATCGAGGGGACTATACCTTGGCAGATTTAATCGCTTCTTCACCAAGATTCATGCCCTCTCCTAGGCCTTTTGAAGGCTTAGATTCACCATCATCAATGATTTCATCTTCTGGAATGATGTCTACGCCTAGACCAGTATCGTTTGAAACTTCAAGATCCATGTTTGAAACACCTCAGACGATTGACGAGGGATTGAGTACAAAAAATATCACGCTCTCGAATAATACTGAGCCGATGAGTATTGTAGATGAGGTAAGTCTTAATAATCACATTTGAATTAAGATTGAGAAATAATTCAATAACTATTATCATCTCCTTTCTCTGGATTTGAATTGAATTAATTTTATTACTAAAATTTAGTAAACGGACTATTATTTCGAGACGATTTTGAAACAAGTAACAAAAAATTAAATTAGGATTGACAATTTCCATTTATATTACCACCATCCAAAATGCTTGAAATGTTGAAGTAGTGTTAGTTATTTAATTTAAATGTTCTCTTAACATTTCTTCATTATTTTATTTAGATGTTCAAATTGAAGTCACTGAATAAAGTTCTCACTTGTTGAAATATTTATTGTAGAACCTTTATTTCCTTGAAGCAGATAGCTCACCAGCGAGTAGATCAAGTAATTTTATTGTTTCTGTTACTATTCAGATTTTTTCTTTAAATCTATTTCTTGGGTGCTTCACATAACTTAGAATTCTGATGTTATGTCGGGGTATTGTTCTTGTATAGGCTCTCGGGGAACTCAGGGAGTTGACTCATTATCAGTGAGAACGAGGTACTCTTCTATCATTTATTGTCTTTGCTTTATTGCCCTTTCAATTGAAGTAAATGTTAGAGATTAAATGTATACGGATATTTGTATACTTAATTGCTTTATTAGATCTAGGCTCATTAGGTCTGTCAGGCCCGTTGTAACTCTTATATAAAGGCATTGCCTTTCATTGAATAAAAATATGACTCTTCAGTCTAACGCTCTTGATTACAGTAAACATTATTTATTAATTGTTAGTAAGAAACTAATTCCATCAACTGATGAGTATATAAAAAGCCAAAGCCACCAAAATTCTATGATCAAACAGATAAGATAATTGGGAAAAAAAAACAATTAGAGGGAGGCCAAGGCAGTAGAAATGACTAACTCTACATAAATTTAATTGTTTCAAGTACTCTAAATTGCTTGTCATAATTGTTCCTCTTTTATGTTTATGTCACAGAGCTGTAGGTCGGTATTTACAGAGTCTTTCTCCTATTAAATCAGTCTCAGATGACTCAACCCAAGATTTTTCTTTGGACAACATCCTAGAAGGAAAAAAAAGAAAGCTATGTGCACGGATGTTCTATGAGATACTGGTAATTTATTTTGAAGTTTTCAAAGATTTTTCTAGCTATATTTTGTTGTGAGAAAATTACTTAAATTTCACTGTTTTTTTTTATCTTTTATGGTTCAAAGCTATGGCCACCGACTTGAAATTTAATATCCTACGAGTTATCTAAACAACTAAAGGTAGTTGATTCAAATAGTTTTCCTGTTAGAATACCCGAGATGTGCTGGCTTGGACACTCACAGTTATAAAGAAAAAATAATAGTTTATTTGCATATCGCACGATTCTGTTTTCTGTCGAGTTACTTCTGCTTCAATTATGGCCCGTTGAACTTGTCCTCCTCCCCACTATATATAGTTTAAAAGTTTTCTTCATTTTGGTCAATATGGTTTTTTTTTTTGTTAACATCGAATTCTTCTCACTGGTTTTTTTGAATTTTGTTTAGATTTCATCCTTAAGCACCTAAGTAACTTCCTTTCAAAATGTTGAGATATGCCTTGAACGAGTTAATGCCCCTAAGATTACTGAGTCGGAGTCTCACTGCCCGGTCAGCGAGTGGGGGTTCGGGGGAAATGCTTCCAAAACCTAGACAAATTTTGTATTGGCGTTTGTATTTTCGTTTATGGGCTTATGTATTTTGACTTTTATCTGTAATAGGGTTTTAATGAAAGCATCTATATAAACTCGAATTAAAATCCTAGATGATGCTCATTATGTATTATCGCGATTCTCCCTAATAAACTCGTGCTCCCTCTCACCGCGTAAATTCTGTGTGTTGTTTCTTCTCTTTCTGCATTTTCTTTATCTTCGATTGTTTATTGATTGTCGATTTCATAACACAAAATTACTATGAATTTATTGTTTACTGATATTGGATTCTTGACTGCATTTTCATTAGGTTTTGAAGAGTTATGATCTTATTGATATACGACAAGATTTACCTTATGGTGATATAACTTTGAAATTGACTGCAAAACTTACGGAGGCTCGATTATAG

mRNA sequence

ATGTTCTACTCGCACACGTTGTTGGCGCGCAAAACGCCATTGGGAACCGTGTGGTGTGCAGCTCATTTGCAGCACCGTCTCAACAAGAAGGATTACCAAAACACCAAAATCCCTCTTGTTGTTGATGCCATCATGTTTGGAGAGGTTCCTCTTGCCTTACGTACCTCAAGCTACCTTTTATTAGGCGTTGTGCGAATTTATTCGAAGCAAATCGATTATTTAAAGCATGATGTTGATGTTTTGGTGTTGGAGTTACGGAAAATGCATTCGCACGCTTCATCGAAACTCACTTTACCTGAGAATGCTTATCAAGCACCGTTTCATTCTATCACTCTTCCAGAGACGTTTGATCTCGATGCTCTAGAATTGGATATTGATGTTTACGATGATGGAGATCCAGATACTCATACGAGTAGTCAGGAAGAGATCACTCTTGCAGATCAAATTTCTTTGGGAAGGGATACTTATGTAGCTATAACTTTCGATGAGGATGTCATGATGGATTTATCACATCCTGGAGAACCTCCTGATTTGGGGTTTAAATCAATGGAAGAAGACGCGATTCTTCCACCTCATGTAGATACAACTATGGAAGACTTAATTGGTGATGAAGATGTACTTAACACGATACTTGATGAGGACATTATGCCACAAAGTTTTCGAGGAGTTGAAGTCCTTGAAGCTGTGAATTTTCAAGAATTTGATCCAAGTCATCAGAGTGTGCAAAAAGATGATGACTCTCCACAAAATGTTCCAGAAGTTGAAGTTCTACGAGAAGCTGCCCCTGATTTTAGTCCAAGAGATATTCCTATGGTGCCTCCACCTGGTGGTGATGGCACGTCCGAACCACATCGTCTTGTAGATGAAAATTTAAACCAAGAAAATCTTTTAATGGAAGATAATATAACTCTTCCAAAGACATCACTACCACTTGAGGGAAGCACAAGACCTTCAACTTCTCTTACTTCACAAGAGACACTTGATATGAACGATACACATATTTCATTTAGACAATCTCCCATGGACTTTGTTCTTCAACCTACTCCTCCACAACAACCAAAGCCAAGATCAAGAAAGAGAAAACAGTTCTTTGACAAGTCTACAGTTCTTAGTAGCAAGTTTTTGAAAAAGGCTCTTGAAGATTCTAGCGATTTATTGTGTAAGAGGAGGAAATTACCATGCTCTTCTTTGGAGGTATGGAAGTTAAACAACTCCTTGAGAAAAGAAGAAGTTTTCTCACATCCTTTCATCACTGGTCTTTGTCATGATCTCGATAATATTTTTAAGGAGGATTACATTATTAAAAAATGTCGTACAATATTAGTGGAGGAGGCTTCTGAGGATCTCGGTGATGATGCAAGAAATGTTGCTTCAACTAGTGAAACCTTTTTATGCCAAGAAGATGCACCATCTCCAGCTCCACAAGTTGCTTCTCCACCACATACTGAAATTCCACCCATCAATGACCCCTTTAGAAACATAGCTTCATCAGGCGAGACTTTCTCGCCGCTTGTAATTGCTTCATCTCCAACTGGAGAAGATGCTTCCTTGCCACATTTCAAAATTCCGCCTGCGGTCGATCCTTCTTCTTCCTTTTCTGACATGGAGATTGAACATCTTCGTAATGTTGAGGGCAATCGAGGGGACTATACCTTGGCAGATTTAATCGCTTCTTCACCAAGATTCATGCCCTCTCCTAGGCCTTTTGAAGGCTTAGATTCACCATCATCAATGATTTCATCTTCTGGAATGATGTCTACGCCTAGACCAGTATCGTTTGAAACTTCAAGATCCATGTTTGAAACACCTCAGACGATTGACGAGGGATTGAGTACAAAAAATATCACGCTCTCGAATAATACTGAGCCGATGAGTATTGTAGATGAGAACCTTTATTTCCTTGAAGCAGATAGCTCACCAGCGAGTAGATCAAGCTCTCGGGGAACTCAGGGAGTTGACTCATTATCAGTGAGAACGAGAGCTGTAGGTCGGTATTTACAGAGTCTTTCTCCTATTAAATCAGTCTCAGATGACTCAACCCAAGATTTTTCTTTGGACAACATCCTAGAAGGAAAAAAAAGAAAGCTATGTGCACGGATGTTCTATGAGATACTGGTTTTGAAGAGTTATGATCTTATTGATATACGACAAGATTTACCTTATGGTGATATAACTTTGAAATTGACTGCAAAACTTACGGAGGCTCGATTATAG

Coding sequence (CDS)

ATGTTCTACTCGCACACGTTGTTGGCGCGCAAAACGCCATTGGGAACCGTGTGGTGTGCAGCTCATTTGCAGCACCGTCTCAACAAGAAGGATTACCAAAACACCAAAATCCCTCTTGTTGTTGATGCCATCATGTTTGGAGAGGTTCCTCTTGCCTTACGTACCTCAAGCTACCTTTTATTAGGCGTTGTGCGAATTTATTCGAAGCAAATCGATTATTTAAAGCATGATGTTGATGTTTTGGTGTTGGAGTTACGGAAAATGCATTCGCACGCTTCATCGAAACTCACTTTACCTGAGAATGCTTATCAAGCACCGTTTCATTCTATCACTCTTCCAGAGACGTTTGATCTCGATGCTCTAGAATTGGATATTGATGTTTACGATGATGGAGATCCAGATACTCATACGAGTAGTCAGGAAGAGATCACTCTTGCAGATCAAATTTCTTTGGGAAGGGATACTTATGTAGCTATAACTTTCGATGAGGATGTCATGATGGATTTATCACATCCTGGAGAACCTCCTGATTTGGGGTTTAAATCAATGGAAGAAGACGCGATTCTTCCACCTCATGTAGATACAACTATGGAAGACTTAATTGGTGATGAAGATGTACTTAACACGATACTTGATGAGGACATTATGCCACAAAGTTTTCGAGGAGTTGAAGTCCTTGAAGCTGTGAATTTTCAAGAATTTGATCCAAGTCATCAGAGTGTGCAAAAAGATGATGACTCTCCACAAAATGTTCCAGAAGTTGAAGTTCTACGAGAAGCTGCCCCTGATTTTAGTCCAAGAGATATTCCTATGGTGCCTCCACCTGGTGGTGATGGCACGTCCGAACCACATCGTCTTGTAGATGAAAATTTAAACCAAGAAAATCTTTTAATGGAAGATAATATAACTCTTCCAAAGACATCACTACCACTTGAGGGAAGCACAAGACCTTCAACTTCTCTTACTTCACAAGAGACACTTGATATGAACGATACACATATTTCATTTAGACAATCTCCCATGGACTTTGTTCTTCAACCTACTCCTCCACAACAACCAAAGCCAAGATCAAGAAAGAGAAAACAGTTCTTTGACAAGTCTACAGTTCTTAGTAGCAAGTTTTTGAAAAAGGCTCTTGAAGATTCTAGCGATTTATTGTGTAAGAGGAGGAAATTACCATGCTCTTCTTTGGAGGTATGGAAGTTAAACAACTCCTTGAGAAAAGAAGAAGTTTTCTCACATCCTTTCATCACTGGTCTTTGTCATGATCTCGATAATATTTTTAAGGAGGATTACATTATTAAAAAATGTCGTACAATATTAGTGGAGGAGGCTTCTGAGGATCTCGGTGATGATGCAAGAAATGTTGCTTCAACTAGTGAAACCTTTTTATGCCAAGAAGATGCACCATCTCCAGCTCCACAAGTTGCTTCTCCACCACATACTGAAATTCCACCCATCAATGACCCCTTTAGAAACATAGCTTCATCAGGCGAGACTTTCTCGCCGCTTGTAATTGCTTCATCTCCAACTGGAGAAGATGCTTCCTTGCCACATTTCAAAATTCCGCCTGCGGTCGATCCTTCTTCTTCCTTTTCTGACATGGAGATTGAACATCTTCGTAATGTTGAGGGCAATCGAGGGGACTATACCTTGGCAGATTTAATCGCTTCTTCACCAAGATTCATGCCCTCTCCTAGGCCTTTTGAAGGCTTAGATTCACCATCATCAATGATTTCATCTTCTGGAATGATGTCTACGCCTAGACCAGTATCGTTTGAAACTTCAAGATCCATGTTTGAAACACCTCAGACGATTGACGAGGGATTGAGTACAAAAAATATCACGCTCTCGAATAATACTGAGCCGATGAGTATTGTAGATGAGAACCTTTATTTCCTTGAAGCAGATAGCTCACCAGCGAGTAGATCAAGCTCTCGGGGAACTCAGGGAGTTGACTCATTATCAGTGAGAACGAGAGCTGTAGGTCGGTATTTACAGAGTCTTTCTCCTATTAAATCAGTCTCAGATGACTCAACCCAAGATTTTTCTTTGGACAACATCCTAGAAGGAAAAAAAAGAAAGCTATGTGCACGGATGTTCTATGAGATACTGGTTTTGAAGAGTTATGATCTTATTGATATACGACAAGATTTACCTTATGGTGATATAACTTTGAAATTGACTGCAAAACTTACGGAGGCTCGATTATAG

Protein sequence

MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLLLGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGFKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSHQSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLLMEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQVASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSSFSDMEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFETSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDSLSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLIDIRQDLPYGDITLKLTAKLTEARL

Homology

[Close]

BLAST of Sed0008374 vs. NCBI nr
Match: XP_023528123.1 (sister chromatid cohesion 1 protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1029.6 bits (2661), Expect = 1.3e-296
Identity = 550/743 (74.02%), Postives = 618/743 (83.18%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSITLPETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITLPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDED +PQSF GVEVL+ ++ Q+F PS+
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEDNVPQSFPGVEVLDPMDVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+  QNVPE+EVLREA PD SPRD+PMVP  GGD  SE HR VDEN++QENLL 
Sbjct: 241 QRMREDDNLSQNVPEIEVLREAVPDLSPRDVPMVPSLGGDHMSESHRFVDENISQENLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MED +TLP+TSLP E S    TS TSQE LDM DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDKMTLPRTSLPFEQSAGLPTSATSQEALDMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQFFDKSTVL++KF+KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQFFDKSTVLTNKFMKKALEDTSDLLRERRNTPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL  IF  +YI KKCR   +EEA  DLG DARN+ASTSETFL Q DAPSPAP+ 
Sbjct: 421 VTGLCHDLCGIFHVNYIAKKCRATSLEEAFGDLG-DARNIASTSETFLGQADAPSPAPEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
            SPPH+ IPP  DP  NIAS+GE FSPLV  A SP  E A  PH +IP  VDP+S+ S  
Sbjct: 481 VSPPHSGIPPSVDPAINIASAGEIFSPLVPPAPSPAREAAPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARMFYE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMFYETLVLKSYGLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDI LKLT KL+ A++
Sbjct: 721 VQQDEPYGDIRLKLTPKLSMAQI 741

[Close]

BLAST of Sed0008374 vs. NCBI nr
Match: XP_022934162.1 (sister chromatid cohesion 1 protein 3 [Cucurbita moschata] >XP_022934163.1 sister chromatid cohesion 1 protein 3 [Cucurbita moschata] >KAG7018097.1 Sister chromatid cohesion 1 protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1020.8 bits (2638), Expect = 6.0e-294
Identity = 546/743 (73.49%), Postives = 615/743 (82.77%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSITLPETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITLPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDE  +PQSF GVEV + ++ Q+F PS+
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEHNVPQSFPGVEVSDPMDVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+  QNVPE+EVLREA PD SPRD+PMV   GGD  SE HRLVDEN++QENLL 
Sbjct: 241 QRMREDDNLSQNVPEIEVLREAVPDLSPRDVPMVSSLGGDDMSESHRLVDENISQENLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MED +TLP+TSLP E S    TS TSQE LDM DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDKMTLPRTSLPFEQSAGLPTSATSQEALDMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQ FDKSTVL++KF+KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQLFDKSTVLTNKFMKKALEDTSDLLRERRNAPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL +IF  +YI KKCR   +EEA  D G DARN+ASTSETFL Q DAPSPAP+ 
Sbjct: 421 VTGLCHDLCDIFHVNYIAKKCRATSLEEAFGDPG-DARNIASTSETFLGQADAPSPAPEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
           ASPPH+ IPP  DP RNIAS+GE FSPLV  A SP  E    PH +IP  VDP+S+ S  
Sbjct: 481 ASPPHSGIPPSVDPARNIASAGEIFSPLVPSAPSPAREAVPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARMFYE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMFYETLVLKSYGLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDI LKLT KL+  ++
Sbjct: 721 VQQDEPYGDIRLKLTPKLSMGQI 741

[Close]

BLAST of Sed0008374 vs. NCBI nr
Match: XP_022983911.1 (sister chromatid cohesion 1 protein 3 [Cucurbita maxima] >XP_022983912.1 sister chromatid cohesion 1 protein 3 [Cucurbita maxima])

HSP 1 Score: 1008.8 bits (2607), Expect = 2.4e-290
Identity = 542/743 (72.95%), Postives = 613/743 (82.50%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSIT PETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITFPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDED +PQSF  VEV + ++ Q+F P++
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEDNVPQSFPRVEVSDPMDVQDFGPNN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+   NVPE+EVLREA PD SPRD+PM P  GGD  SE H +VDEN++Q NLL 
Sbjct: 241 QRMREDDNLSPNVPEIEVLREAVPDLSPRDVPMEPSLGGDHMSESHCIVDENISQGNLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MEDN+TLPKTSL  E S    TS TSQE L+M DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDNMTLPKTSLQFEQSAGLPTSATSQEALNMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQFFDKSTVL++K +KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQFFDKSTVLTNKSMKKALEDTSDLLRERRNTPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL +IF  +YI KKCR   +EEAS DLG DARN+ASTSETFL Q DAPSPA + 
Sbjct: 421 VTGLCHDLCDIFHVNYIAKKCRATSLEEASGDLG-DARNIASTSETFLGQADAPSPALEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
           ASPPH+ IPP  DP RNIAS+GE FSPLV  A SP  E A  PH +IP  VDP+S+ S  
Sbjct: 481 ASPPHSGIPPSVDPARNIASAGEIFSPLVPSAPSPAQEAAPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARM YE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMLYETLVLKSYGLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDI LKLT KL+ A++
Sbjct: 721 VQQDEPYGDIRLKLTLKLSMAQI 741

[Close]

BLAST of Sed0008374 vs. NCBI nr
Match: KAG6581597.1 (putative helicase MAGATAMA 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 994.2 bits (2569), Expect = 6.0e-286
Identity = 533/720 (74.03%), Postives = 597/720 (82.92%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSITLPETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITLPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDE  +PQSF GVEV + ++ Q+F PS+
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEHNVPQSFPGVEVSDPMDVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+  QNVPE+EVLREA PD SPRD+PMV   GGD  SE HRLVDEN++QENLL 
Sbjct: 241 QRMREDDNLSQNVPEIEVLREAVPDLSPRDVPMVSSLGGDDMSESHRLVDENISQENLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MED +TLP+TSLP E S    TS TSQE LDM DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDKMTLPRTSLPFEQSAGLPTSATSQEALDMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQ FDKSTVL++KF+KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQLFDKSTVLTNKFMKKALEDTSDLLRERRNAPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL +IF  +YI KKCR   +EEA  D G DARN+ASTSETFL Q DAPSPAP+ 
Sbjct: 421 VTGLCHDLCDIFHVNYIAKKCRATSLEEAFGDPG-DARNIASTSETFLGQADAPSPAPEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
           ASPPH+ IPP  DP RNIAS+GE FSPLV  A SP  E    PH +IP  VDP+S+ S  
Sbjct: 481 ASPPHSGIPPSVDPARNIASAGEIFSPLVPSAPSPAREAVPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 715
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARMFYE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMFYETLVLKSYGLID 718

[Close]

BLAST of Sed0008374 vs. NCBI nr
Match: XP_022158404.1 (sister chromatid cohesion 1 protein 3-like isoform X1 [Momordica charantia])

HSP 1 Score: 970.7 bits (2508), Expect = 7.1e-279
Identity = 521/743 (70.12%), Postives = 612/743 (82.37%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKT LGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTALGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMH-SHASSKLTLPENAYQAPFHSITLPETFDLD 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH SH+S+KLTLPENAYQAPFHSITLPETFDLD
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHSSHSSTKLTLPENAYQAPFHSITLPETFDLD 120

Query: 121 ALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLG 180
           ALELD D+Y DG PD H  SQEEITLA+Q+ +GRD YVAI+FDED+M+DLSHP E PDLG
Sbjct: 121 ALELDSDIYRDGIPDNHLRSQEEITLAEQVPVGRDAYVAISFDEDIMIDLSHPMEAPDLG 180

Query: 181 FKSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPS 240
           FKSME+  + PP +D+TM  EDLIG+EDVLN   +EDIM QS  G++V +++N Q+    
Sbjct: 181 FKSMEDVGLPPPPMDSTMNVEDLIGEEDVLNMRPNEDIMRQSVPGLDVPDSMNVQD---- 240

Query: 241 HQSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL 300
            Q ++ DD+S Q+VPE+EVLREAAPDFSPRD+P+ PP   +   EP RL+DE++NQENLL
Sbjct: 241 -QGMRDDDNSVQHVPEIEVLREAAPDFSPRDLPVAPPVDREYMVEPSRLIDESINQENLL 300

Query: 301 --MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKP 360
             MED +TLP+TSLP E S  P TS TS+E L+M DTHISF + PM+ VLQPT  Q+PK 
Sbjct: 301 LVMEDKVTLPRTSLPFEESAGPPTSATSKEALEMIDTHISFGRYPMELVLQPT-AQEPKS 360

Query: 361 RSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHP 420
           RSRKRK FFDKSTVL++KF+KKALEDSSDLL +RR  P +SL+VWKLNNSLRK+EVF HP
Sbjct: 361 RSRKRKHFFDKSTVLTNKFMKKALEDSSDLLRERRNTPSTSLDVWKLNNSLRKDEVFYHP 420

Query: 421 FITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQ 480
            +TGLCHDL ++F  DYI  KC +  +E+ASED G + RN+AST ET L + DAPSPAP 
Sbjct: 421 SLTGLCHDLGDMFNMDYIATKCCSTSLEKASEDPG-NVRNIASTGETILYRADAPSPAPD 480

Query: 481 VASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDP-SSSFSD 540
           VAS PHT IPP  DP RNIA  GETFSPLV+A SP  E  S PHF+IPP ++P S+SFS+
Sbjct: 481 VASSPHTIIPPTVDPARNIALVGETFSPLVVAPSPDQEAVSSPHFEIPPTINPASASFSE 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           MEIEHLR+VEGNRGD TLADLIAS PR MPSPR  EGL SPS++I+S+ ++STP  +S E
Sbjct: 541 MEIEHLRDVEGNRGDDTLADLIASPPRSMPSPRLSEGLGSPSAVIASTRVLSTPGVISTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            S+S+FETP+TIDE +  +NITLS+  E M+  DE LYFLEAD+SP     S+ TQ VDS
Sbjct: 601 PSKSVFETPRTIDE-VGGENITLSDIPEEMNTADEELYFLEADNSP---PGSQRTQRVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL SLSPIKS+SDDS QD  L+NILEGK+RKLCARMFYE LVLKSYDLID
Sbjct: 661 LSVRTRAVGRYLMSLSPIKSISDDSIQDLCLNNILEGKRRKLCARMFYETLVLKSYDLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD+PYGDITLKLT KL++A++
Sbjct: 721 VQQDVPYGDITLKLTPKLSKAQI 732

[Close]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 344.0 bits (881), Expect = 4.3e-93
Identity = 276/744 (37.10%), Postives = 377/744 (50.67%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARK PLGTVWCAAH+  RL K  Y +  IP  VD IMF EVPLALRTSS+LL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           +GVVRIYSK++DYL +D ++L   + K  +  S+++ LPE+A QAP  S+TLP+  +LD 
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAK--AFVSTQVNLPEDARQAPPESVTLPQALNLDE 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVM-----MDLSHPGEP 180
            +L+ D   D + D HT S+E+ITL DQI  G D YVA+TFDED++     MD+    EP
Sbjct: 121 FDLEDDTL-DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEP 180

Query: 181 PDLGFKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFD 240
                  ++ +       D    D     D   T    ++  + F  V+     N  E +
Sbjct: 181 VSRHTGEIDVETAHETGPDNEPRDSNIAFDT-GTYSPRNV-TEEFTEVQDPRQSNLTE-E 240

Query: 241 PSHQSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQEN 300
               S + D  SP  VPE+E +R+AA D SP   P       D   E    +DE LN   
Sbjct: 241 RIPNSERNDATSPGTVPEIERMRDAAHDLSPTSHPSFAAQQQDVRVERTESLDETLN--- 300

Query: 301 LLMEDNITLPKTSLPLEGSTRPST----SLTSQETLDMNDTHISFRQSPMDFVLQPTPPQ 360
              E   T+P     +  S R S     S +        +    F       VLQP+PP 
Sbjct: 301 ---EKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADFVHPSPQLVLQPSPPP 360

Query: 361 QPKPRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEV 420
           QP+ R+RKRK  FD  TVL++K + + L+D SD L KR+K+P S L+ W++NN  RK++ 
Sbjct: 361 QPQRRARKRKN-FDGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNNQSRKDQN 420

Query: 421 FSHPFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPS 480
           F+ P  TG   DL N+F++DY+  K    +    S++   +  +V+ T E  + + +  S
Sbjct: 421 FNEPLFTGFSDDLRNVFEKDYVASKPHLAV----SDETLPEPASVSPTREAEV-EINPVS 480

Query: 481 PAPQVASPPHT-EIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSS 540
           P P   +P  T ++ P       + S+G    P    +     +A  P          + 
Sbjct: 481 PIPDSTNPDSTVQLSPAQQTEDVLDSAG----PRPAHAESVATEAQSPR---------TF 540

Query: 541 SFSDMEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRP 600
              DM IEHLR+                 P +MPSP P           + SG   T   
Sbjct: 541 DNDDMGIEHLRD--------------GGFPVYMPSPPPRSSPFRTDDFTTQSGNWETE-- 600

Query: 601 VSFETSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLE-ADSSPASRSSSRGT 660
            S+ T  S    P+ +      +N+ LS  +E     DE LYFLE   +SP    +S   
Sbjct: 601 -SYRTEPSTSTVPEDLP---GQRNLGLSPVSER---TDEELYFLEVGGNSPVGTPAS--- 660

Query: 661 QGVDSLSVRTRAVGRYL-QSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLK 720
           Q   +L+ R RA+ +YL Q  S   + S   + D SL  IL GK RKL ARMF+E LVLK
Sbjct: 661 QDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLK 687

Query: 721 SYDLIDIRQDLPYGDITLKLTAKL 733
           S  LID++QD PYGDI LKL   L
Sbjct: 721 SRGLIDMQQDRPYGDIALKLMPAL 687

[Close]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 9.4e-32
Identity = 97/262 (37.02%), Postives = 139/262 (53.05%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYS  +LA+K PLGT+W AAHL+ +L K    +T I + VD+I+F E P+ALR SS+LL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYS++++YL  D    +L++++  +  S+ + LP     AP+HSITLPETFDLD 
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQ--AFRSAAVDLPPEESTAPYHSITLPETFDLDD 120

Query: 121 LEL-DIDVYDDGDPDTHTSSQEEITLAD----------QISL------GRDTYVAITFDE 180
            EL D +++     D H S++E+ITL D          Q  L      G  +  A+  DE
Sbjct: 121 FELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDE 180

Query: 181 DVMMDLSHPGEPPDLGFKSMEEDAIL---PPHVDTTMEDLIGDEDVLNTILDEDIMPQSF 240
            V  D    G   D G   ++ +A L    P +  +ME +             + MP  F
Sbjct: 181 AVFQDKDVIGS-DDEGVPGIDHNAYLDAAAPGIKDSMEGV------------SEAMPMDF 240

Query: 241 RGVEVLEAVNFQEFDPSHQSVQ 243
              +V +     EF    Q+ Q
Sbjct: 241 NEEQVEDLAMNNEFIEDAQAPQ 247

HSP 2 Score: 59.7 bits (143), Expect = 1.6e-07
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 656  SVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLIDI 715
            S RTRAV +YLQ+L      +++       D +L GK RK  +RMF+E LVLK+ D I +
Sbjct: 952  SSRTRAVAKYLQTL--FDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQV 1011

Query: 716  RQDLPYGDITLKLTAKLTEA 736
             Q  PY  I +K   KLT++
Sbjct: 1012 EQGKPYESIIIKPRPKLTKS 1029

HSP 3 Score: 37.7 bits (86), Expect = 6.6e-01
Identity = 51/246 (20.73%), Postives = 97/246 (39.43%), Query Frame = 0


Query: 244 DDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPG--------GDGTSEPHRLVDENLNQEN 303
           D   P+ V  V   +    DF     P    PG         + T +     +  L  E+
Sbjct: 436 DFPPPEKVLAVPNRQGDGNDFMVESTPDKEDPGTCNDDAGNNNITGKKRTFTESTLTAES 495

Query: 304 LLMEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQ--- 363
           L   +++ L ++    +        L+S   L    + +  R +P   VL+P   ++   
Sbjct: 496 LNSVESVGLIQSKRTADSVPDDDDLLSS--ILVGKSSFLKMRPTP---VLEPATTKRLRS 555

Query: 364 -PKPRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEV 423
            P+  + KRK   D   VL    +++ L ++ D+   R+K PC+  E+  L     ++ +
Sbjct: 556 APRSTATKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGL 615

Query: 424 FSHPFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLG---DDARNVASTSETFLCQED 475
           F  P  TG+  +L ++  E Y ++    I  ++    +G   D+  +V +  E    +  
Sbjct: 616 FKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTAVEENKTEESS 675

[Close]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot
Match: O93310 (Double-strand-break repair protein rad21 homolog OS=Xenopus laevis OX=8355 GN=rad21 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-20
Identity = 109/418 (26.08%), Postives = 188/418 (44.98%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFY+H +L+++ PL  +W AAH   +L K       +   V++I+  +V +ALRTS +LL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIICPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETF-DLD 120
           LGVVRIY ++  YL  D +   ++++   +     + LPE   +A +++ITLPE F D D
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKM--AFRPGVVDLPEENREAAYNAITLPEEFHDFD 120

Query: 121 ALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVM-MDLSHPGEPPDL 180
               D+D               +I +A Q SL +     IT  E+V  +++    +  D 
Sbjct: 121 QPLPDLD---------------DIDVAQQFSLNQSRVEEITMREEVSNINILQDNDFGDF 180

Query: 181 GFKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           G    E             E    ++D+L T      +       ++ E  N  E+D  +
Sbjct: 181 GMDDRE----------MMREGSAFEDDMLTTNASNLKLEPEQSTSQLNEKSNHLEYDDQY 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLLM 300
           +     + +   + + ++L   A      D P +P    +G + P + V ++L+ ++ + 
Sbjct: 241 KDDNFGEGNEGGILDDKLLSNDAGGIFD-DPPAMPE---EGVAMPEQPVHDDLDDDDNVS 300

Query: 301 EDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPRSR 360
                 P +  P+E    P  ++T Q TL  N+   +F   P+D  ++ T  +      R
Sbjct: 301 MGAPDSPDSVDPVE----PLPTMTDQTTLVPNEEE-AFALEPIDITVKETKAK------R 360

Query: 361 KRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKL-PCSSLEVWKLNNSLRKEEVFSHP 416
           KRK   D    L SK ++  L D SD++       P   L +WK    +  E++FS P
Sbjct: 361 KRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMMWKETGGV--EKLFSLP 374

[Close]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot
Match: Q3SWX9 (Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.3e-19
Identity = 130/499 (26.05%), Postives = 223/499 (44.69%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFY+H +L+++ PL  +W AAH   +L K       +   V++I+  +V +ALRTS +LL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETF-DLD 120
           LGVVRIY ++  YL  D +   ++++   +     + LPE   +A +++ITLPE F D D
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKM--AFRPGVVDLPEENREAAYNAITLPEEFHDFD 120

Query: 121 ALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLG 180
               D+D               +I +A Q SL +     IT  E+V  ++S   E  D G
Sbjct: 121 QPLPDLD---------------DIDVAQQFSLNQSRVEEITMREEV-GNISILQE-NDFG 180

Query: 181 FKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSHQ 240
              M++  I+        +D++      N +L+ +   QS   +   E +N  E++  ++
Sbjct: 181 DFGMDDREIMREGSAFEDDDMLASTGASNLLLEPE---QSTSNLN--EKINHLEYEDQYK 240

Query: 241 SVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLLME 300
                DD+     +  +L +     +   I   PP      SE   ++ E    +++  +
Sbjct: 241 -----DDNFGEGNDGGILDDKLISNNDGGIFDDPP----ALSEAGVMLPEQPAHDDMDED 300

Query: 301 DNITL-----PKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPK 360
           DN+++     P +  P+E    P  ++T Q TL  N+   +F   P+D  ++ T  +   
Sbjct: 301 DNVSMGGPDSPDSVDPVE----PMPTMTDQTTLVPNEEE-AFALEPIDITVKETKAK--- 360

Query: 361 PRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKL-PCSSLEVWKLNNSLRKEEVFS 420
              RKRK   D    L SK ++  L D SD++       P   L +WK    +  E++FS
Sbjct: 361 ---RKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMMWKETGGV--EKLFS 420

Query: 421 HPFITGLCHDLDNIFKEDYIIKKCRTILVEE--ASEDLGDDARNVASTSETFLCQEDAPS 480
            P      + L  +F       +C T LV E       G +A N+    + FL + + P 
Sbjct: 421 LPAQPLWNNRLLKLF------TRCLTPLVPEDLRKRRKGGEADNL----DEFLKEFENPE 443

Query: 481 PAPQVASPPHTEIPPINDP 491
              +     H +   I++P
Sbjct: 481 VPREDQQQQHQQRDVIDEP 443

[Close]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot
Match: O60216 (Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD21 PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 9.1e-19
Identity = 174/734 (23.71%), Postives = 286/734 (38.96%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFY+H +L+++ PL  +W AAH   +L K       +   V++I+  +V +ALRTS +LL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETF-DLD 120
           LGVVRIY ++  YL  D +   ++++   +     + LPE   +A +++ITLPE F D D
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKM--AFRPGVVDLPEENREAAYNAITLPEEFHDFD 120

Query: 121 ALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLG 180
               D+D               +I +A Q SL +     IT  E+V  ++S   E  D G
Sbjct: 121 QPLPDLD---------------DIDVAQQFSLNQSRVEEITMREEV-GNISILQE-NDFG 180

Query: 181 FKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSHQ 240
              M++  I+        +D++      N +L+ +   QS   +   E +N  E++  ++
Sbjct: 181 DFGMDDREIMREGSAFEDDDMLVSTTTSNLLLESE---QSTSNLN--EKINHLEYEDQYK 240

Query: 241 SVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLLME 300
                DD+     +  +L +     +   I   PP      SE   ++ E    +++  +
Sbjct: 241 -----DDNFGEGNDGGILDDKLISNNDGGIFDDPP----ALSEAGVMLPEQPAHDDMDED 300

Query: 301 DNITL-----PKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPK 360
           DN+++     P +  P+E    P  ++T Q TL  N+   +F   P+D  ++ T  +   
Sbjct: 301 DNVSMGGPDSPDSVDPVE----PMPTMTDQTTLVPNEEE-AFALEPIDITVKETKAK--- 360

Query: 361 PRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKL-PCSSLEVWKLNNSLRKEEVFS 420
              RKRK   D    L SK ++  L D SD++       P   L +WK    +  E++FS
Sbjct: 361 ---RKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKKLMMWKETGGV--EKLFS 420

Query: 421 HPFITGLCHDLDNIFKEDYIIKKCRTILVEE--ASEDLGDDARNVASTSETFLCQEDAPS 480
            P      + L  +F       +C T LV E       G +A N+    + FL + + P 
Sbjct: 421 LPAQPLWNNRLLKLF------TRCLTPLVPEDLRKRRKGGEADNL----DEFLKEFENPE 480

Query: 481 PAPQVASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSS 540
              +     H +   I++P   I          V+ +S T  D S               
Sbjct: 481 VPREDQQQQHQQRDVIDEP---IIEEPSRLQESVMEASRTNIDESA-------------- 540

Query: 541 FSDMEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPV 600
                                          MP P P +G+   +  I        P PV
Sbjct: 541 -------------------------------MPPPPP-QGVKRKAGQID-------PEPV 600

Query: 601 SFETSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQG 660
                    E P          NI        + ++ E     E +             G
Sbjct: 601 MPPQQVEQMEIPPVELPPEEPPNI--CQLIPELELLPEKEKEKEKEKEDDEEEEDEDASG 620

Query: 661 VDSLSVRTRAVGRYLQSLSPI-KSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSY 720
            D      R   R  Q L  + ++++    +  SL  +     RK  A  FY  LVLK  
Sbjct: 661 GDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQ 620

Query: 721 DLIDIRQDLPYGDI 725
             I++ Q+ PY DI
Sbjct: 721 QAIELTQEEPYSDI 620

[Close]

BLAST of Sed0008374 vs. ExPASy TrEMBL
Match: A0A6J1F6W9 (sister chromatid cohesion 1 protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441413 PE=3 SV=1)

HSP 1 Score: 1020.8 bits (2638), Expect = 2.9e-294
Identity = 546/743 (73.49%), Postives = 615/743 (82.77%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSITLPETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITLPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDE  +PQSF GVEV + ++ Q+F PS+
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEHNVPQSFPGVEVSDPMDVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+  QNVPE+EVLREA PD SPRD+PMV   GGD  SE HRLVDEN++QENLL 
Sbjct: 241 QRMREDDNLSQNVPEIEVLREAVPDLSPRDVPMVSSLGGDDMSESHRLVDENISQENLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MED +TLP+TSLP E S    TS TSQE LDM DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDKMTLPRTSLPFEQSAGLPTSATSQEALDMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQ FDKSTVL++KF+KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQLFDKSTVLTNKFMKKALEDTSDLLRERRNAPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL +IF  +YI KKCR   +EEA  D G DARN+ASTSETFL Q DAPSPAP+ 
Sbjct: 421 VTGLCHDLCDIFHVNYIAKKCRATSLEEAFGDPG-DARNIASTSETFLGQADAPSPAPEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
           ASPPH+ IPP  DP RNIAS+GE FSPLV  A SP  E    PH +IP  VDP+S+ S  
Sbjct: 481 ASPPHSGIPPSVDPARNIASAGEIFSPLVPSAPSPAREAVPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARMFYE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMFYETLVLKSYGLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDI LKLT KL+  ++
Sbjct: 721 VQQDEPYGDIRLKLTPKLSMGQI 741

[Close]

BLAST of Sed0008374 vs. ExPASy TrEMBL
Match: A0A6J1J0M2 (sister chromatid cohesion 1 protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111482391 PE=3 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 1.1e-290
Identity = 542/743 (72.95%), Postives = 613/743 (82.50%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH+ AS+KLTLPENAYQAPFHSIT PETFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHTQASAKLTLPENAYQAPFHSITFPETFDLDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PDTH  S+EEITLADQIS+GRD YVAITFDEDVM+DLSH GE PDLGF
Sbjct: 121 LELDTDIYYDGIPDTHLRSEEEITLADQISIGRDAYVAITFDEDVMLDLSHLGEDPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
           + MEED I PP VDTTM  E  +G+ED+LN  LDED +PQSF  VEV + ++ Q+F P++
Sbjct: 181 RPMEEDVISPP-VDTTMNVEGTVGNEDILNMRLDEDNVPQSFPRVEVSDPMDVQDFGPNN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL- 300
           Q +++DD+   NVPE+EVLREA PD SPRD+PM P  GGD  SE H +VDEN++Q NLL 
Sbjct: 241 QRMREDDNLSPNVPEIEVLREAVPDLSPRDVPMEPSLGGDHMSESHCIVDENISQGNLLP 300

Query: 301 -MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
            MEDN+TLPKTSL  E S    TS TSQE L+M DTHISFRQSP + VLQPTPPQ P+PR
Sbjct: 301 IMEDNMTLPKTSLQFEQSAGLPTSATSQEALNMIDTHISFRQSPEELVLQPTPPQPPRPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQFFDKSTVL++K +KKALED+SDLL +RR  P SSLEVWK NN LRKE+VF HP 
Sbjct: 361 SRKRKQFFDKSTVLTNKSMKKALEDTSDLLRERRNTPSSSLEVWKFNNRLRKEDVFYHPH 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           +TGLCHDL +IF  +YI KKCR   +EEAS DLG DARN+ASTSETFL Q DAPSPA + 
Sbjct: 421 VTGLCHDLCDIFHVNYIAKKCRATSLEEASGDLG-DARNIASTSETFLGQADAPSPALEA 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLV-IASSPTGEDASLPHFKIPPAVDPSSSFS-D 540
           ASPPH+ IPP  DP RNIAS+GE FSPLV  A SP  E A  PH +IP  VDP+S+ S  
Sbjct: 481 ASPPHSGIPPSVDPARNIASAGEIFSPLVPSAPSPAQEAAPSPHSRIPSTVDPASASSPG 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           +EIEHLR+VEGNRGD TLADLIAS  RFMPSPRP EGL SPS MI S+GM+STP   S E
Sbjct: 541 VEIEHLRDVEGNRGDDTLADLIASPTRFMPSPRPSEGLGSPSVMIGSTGMLSTPGQASTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            SRSMFETP T+DEGL  ++ITLS+  E  S  DE+LYFLEADSSPA RS S+GTQGVDS
Sbjct: 601 PSRSMFETPGTMDEGLGAEDITLSDIPEQRSPADEDLYFLEADSSPAGRSRSQGTQGVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL+SLSPIKS+SDDSTQ+ SL++ILEGK+RKL ARM YE LVLKSY LID
Sbjct: 661 LSVRTRAVGRYLRSLSPIKSISDDSTQELSLNDILEGKRRKLSARMLYETLVLKSYGLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDI LKLT KL+ A++
Sbjct: 721 VQQDEPYGDIRLKLTLKLSMAQI 741

[Close]

BLAST of Sed0008374 vs. ExPASy TrEMBL
Match: A0A6J1DZA9 (sister chromatid cohesion 1 protein 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024895 PE=3 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 3.4e-279
Identity = 521/743 (70.12%), Postives = 612/743 (82.37%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKT LGTVWCAAHLQHRLNKKDY+ TKIP+VVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTALGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMH-SHASSKLTLPENAYQAPFHSITLPETFDLD 120
           LGVVRIYSKQIDYLKHDVDVLV+ELRKMH SH+S+KLTLPENAYQAPFHSITLPETFDLD
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHSSHSSTKLTLPENAYQAPFHSITLPETFDLD 120

Query: 121 ALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLG 180
           ALELD D+Y DG PD H  SQEEITLA+Q+ +GRD YVAI+FDED+M+DLSHP E PDLG
Sbjct: 121 ALELDSDIYRDGIPDNHLRSQEEITLAEQVPVGRDAYVAISFDEDIMIDLSHPMEAPDLG 180

Query: 181 FKSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPS 240
           FKSME+  + PP +D+TM  EDLIG+EDVLN   +EDIM QS  G++V +++N Q+    
Sbjct: 181 FKSMEDVGLPPPPMDSTMNVEDLIGEEDVLNMRPNEDIMRQSVPGLDVPDSMNVQD---- 240

Query: 241 HQSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENLL 300
            Q ++ DD+S Q+VPE+EVLREAAPDFSPRD+P+ PP   +   EP RL+DE++NQENLL
Sbjct: 241 -QGMRDDDNSVQHVPEIEVLREAAPDFSPRDLPVAPPVDREYMVEPSRLIDESINQENLL 300

Query: 301 --MEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKP 360
             MED +TLP+TSLP E S  P TS TS+E L+M DTHISF + PM+ VLQPT  Q+PK 
Sbjct: 301 LVMEDKVTLPRTSLPFEESAGPPTSATSKEALEMIDTHISFGRYPMELVLQPT-AQEPKS 360

Query: 361 RSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHP 420
           RSRKRK FFDKSTVL++KF+KKALEDSSDLL +RR  P +SL+VWKLNNSLRK+EVF HP
Sbjct: 361 RSRKRKHFFDKSTVLTNKFMKKALEDSSDLLRERRNTPSTSLDVWKLNNSLRKDEVFYHP 420

Query: 421 FITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQ 480
            +TGLCHDL ++F  DYI  KC +  +E+ASED G + RN+AST ET L + DAPSPAP 
Sbjct: 421 SLTGLCHDLGDMFNMDYIATKCCSTSLEKASEDPG-NVRNIASTGETILYRADAPSPAPD 480

Query: 481 VASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDP-SSSFSD 540
           VAS PHT IPP  DP RNIA  GETFSPLV+A SP  E  S PHF+IPP ++P S+SFS+
Sbjct: 481 VASSPHTIIPPTVDPARNIALVGETFSPLVVAPSPDQEAVSSPHFEIPPTINPASASFSE 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           MEIEHLR+VEGNRGD TLADLIAS PR MPSPR  EGL SPS++I+S+ ++STP  +S E
Sbjct: 541 MEIEHLRDVEGNRGDDTLADLIASPPRSMPSPRLSEGLGSPSAVIASTRVLSTPGVISTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            S+S+FETP+TIDE +  +NITLS+  E M+  DE LYFLEAD+SP     S+ TQ VDS
Sbjct: 601 PSKSVFETPRTIDE-VGGENITLSDIPEEMNTADEELYFLEADNSP---PGSQRTQRVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL SLSPIKS+SDDS QD  L+NILEGK+RKLCARMFYE LVLKSYDLID
Sbjct: 661 LSVRTRAVGRYLMSLSPIKSISDDSIQDLCLNNILEGKRRKLCARMFYETLVLKSYDLID 720

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD+PYGDITLKLT KL++A++
Sbjct: 721 VQQDVPYGDITLKLTPKLSKAQI 732

[Close]

BLAST of Sed0008374 vs. ExPASy TrEMBL
Match: A0A6J1DTE8 (sister chromatid cohesion 1 protein 3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023827 PE=3 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 2.4e-264
Identity = 496/741 (66.94%), Postives = 582/741 (78.54%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKT LGTVWCAAHLQHRLNKKDY  TKIPLVVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTALGTVWCAAHLQHRLNKKDYDKTKIPLVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHD DVLV+ELR+MHSH S+KLTLPENAYQA FHSITLPETF+LDA
Sbjct: 61  LGVVRIYSKQIDYLKHDFDVLVMELRRMHSHTSTKLTLPENAYQASFHSITLPETFELDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PD H  SQEEITLA+Q+  GRD YVAI+FDED+M+DLSHP E PDLGF
Sbjct: 121 LELDSDIYRDGIPDNHLRSQEEITLAEQVPFGRDAYVAISFDEDIMIDLSHPREAPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
            SME+D + PP  D+TM  E LIG++DVLN    ED M QS  GVEV +++N Q+F PS+
Sbjct: 181 ISMEDDVLPPPPTDSTMDVEGLIGEDDVLNMRPGEDNMQQSVPGVEVPDSMNVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENL-- 300
           Q ++ DD+S Q+VPE+EVLREAAPDFSPRD+PMVPP G D  SEP   +DEN+NQENL  
Sbjct: 241 QGMRDDDNSTQHVPEIEVLREAAPDFSPRDLPMVPPVGRDDMSEPCHPIDENINQENLSP 300

Query: 301 LMEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQPKPR 360
           +MED +TLPKTSLP E S  P TS TSQE  +M DTHI F QSPM+ VLQP   Q+ KPR
Sbjct: 301 IMEDVVTLPKTSLPFEESAGPPTSATSQEAFEMIDTHIMFGQSPMELVLQPN-AQETKPR 360

Query: 361 SRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSHPF 420
           SRKRKQFFDKSTVL++KFLKKALEDSSDLL +RR +P +SL+VWKLNNSLRK+E+F HP 
Sbjct: 361 SRKRKQFFDKSTVLTNKFLKKALEDSSDLLRERRNIPSTSLDVWKLNNSLRKDEIFYHPL 420

Query: 421 ITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQV 480
           ITG CHDL ++F  +YI  KC T L +EAS D G +ARNVAST +T L + DAPSPAP+V
Sbjct: 421 ITGFCHDLSDMFNMNYIATKCSTSL-KEASVDSG-NARNVASTGKTILDRADAPSPAPEV 480

Query: 481 ASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSSFSDME 540
           +S PHT IPP  DP                                      S+SFS+ME
Sbjct: 481 SSSPHTIIPPTVDP-------------------------------------ASASFSEME 540

Query: 541 IEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFETS 600
           IEHLR+VEGN GD TLA+L+ASSPRFMPSPR  EGL SPS++I+S+ ++STP  +S E S
Sbjct: 541 IEHLRDVEGNSGDDTLANLVASSPRFMPSPRHSEGLGSPSAVITSTRVLSTPGLISTEPS 600

Query: 601 RSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDSLS 660
           +S+FETP+TIDEG+  +N+T S+  E M+  DE LYFLEAD+SP     S+GT+ VDSLS
Sbjct: 601 KSVFETPRTIDEGIGGENVTFSDIPELMNTADEELYFLEADNSP---PGSQGTRRVDSLS 660

Query: 661 VRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLIDIR 720
           VRTRAVGRYL SLSP+K +S+ S+QD SL+NILEGK+RKLCARMFYE+LVLKSYDLID++
Sbjct: 661 VRTRAVGRYLMSLSPVKPISEPSSQDLSLNNILEGKRRKLCARMFYEMLVLKSYDLIDVQ 698

Query: 721 QDLPYGDITLKLTAKLTEARL 738
           QD PYGDITLKLT KL++A++
Sbjct: 721 QDEPYGDITLKLTQKLSKAQI 698

[Close]

BLAST of Sed0008374 vs. ExPASy TrEMBL
Match: A0A6J1DWN4 (sister chromatid cohesion 1 protein 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023827 PE=3 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 7.7e-263
Identity = 496/743 (66.76%), Postives = 582/743 (78.33%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKT LGTVWCAAHLQHRLNKKDY  TKIPLVVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTALGTVWCAAHLQHRLNKKDYDKTKIPLVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYSKQIDYLKHD DVLV+ELR+MHSH S+KLTLPENAYQA FHSITLPETF+LDA
Sbjct: 61  LGVVRIYSKQIDYLKHDFDVLVMELRRMHSHTSTKLTLPENAYQASFHSITLPETFELDA 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDLGF 180
           LELD D+Y DG PD H  SQEEITLA+Q+  GRD YVAI+FDED+M+DLSHP E PDLGF
Sbjct: 121 LELDSDIYRDGIPDNHLRSQEEITLAEQVPFGRDAYVAISFDEDIMIDLSHPREAPDLGF 180

Query: 181 KSMEEDAILPPHVDTTM--EDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFDPSH 240
            SME+D + PP  D+TM  E LIG++DVLN    ED M QS  GVEV +++N Q+F PS+
Sbjct: 181 ISMEDDVLPPPPTDSTMDVEGLIGEDDVLNMRPGEDNMQQSVPGVEVPDSMNVQDFGPSN 240

Query: 241 QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQENL-- 300
           Q ++ DD+S Q+VPE+EVLREAAPDFSPRD+PMVPP G D  SEP   +DEN+NQENL  
Sbjct: 241 QGMRDDDNSTQHVPEIEVLREAAPDFSPRDLPMVPPVGRDDMSEPCHPIDENINQENLSP 300

Query: 301 LMEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISF--RQSPMDFVLQPTPPQQPK 360
           +MED +TLPKTSLP E S  P TS TSQE  +M DTHI F   QSPM+ VLQP   Q+ K
Sbjct: 301 IMEDVVTLPKTSLPFEESAGPPTSATSQEAFEMIDTHIMFGAGQSPMELVLQPN-AQETK 360

Query: 361 PRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEVFSH 420
           PRSRKRKQFFDKSTVL++KFLKKALEDSSDLL +RR +P +SL+VWKLNNSLRK+E+F H
Sbjct: 361 PRSRKRKQFFDKSTVLTNKFLKKALEDSSDLLRERRNIPSTSLDVWKLNNSLRKDEIFYH 420

Query: 421 PFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAP 480
           P ITG CHDL ++F  +YI  KC T L +EAS D G +ARNVAST +T L + DAPSPAP
Sbjct: 421 PLITGFCHDLSDMFNMNYIATKCSTSL-KEASVDSG-NARNVASTGKTILDRADAPSPAP 480

Query: 481 QVASPPHTEIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSSFSD 540
           +V+S PHT IPP  DP                                      S+SFS+
Sbjct: 481 EVSSSPHTIIPPTVDP-------------------------------------ASASFSE 540

Query: 541 MEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRPVSFE 600
           MEIEHLR+VEGN GD TLA+L+ASSPRFMPSPR  EGL SPS++I+S+ ++STP  +S E
Sbjct: 541 MEIEHLRDVEGNSGDDTLANLVASSPRFMPSPRHSEGLGSPSAVITSTRVLSTPGLISTE 600

Query: 601 TSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDS 660
            S+S+FETP+TIDEG+  +N+T S+  E M+  DE LYFLEAD+SP     S+GT+ VDS
Sbjct: 601 PSKSVFETPRTIDEGIGGENVTFSDIPELMNTADEELYFLEADNSP---PGSQGTRRVDS 660

Query: 661 LSVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLID 720
           LSVRTRAVGRYL SLSP+K +S+ S+QD SL+NILEGK+RKLCARMFYE+LVLKSYDLID
Sbjct: 661 LSVRTRAVGRYLMSLSPVKPISEPSSQDLSLNNILEGKRRKLCARMFYEMLVLKSYDLID 700

Query: 721 IRQDLPYGDITLKLTAKLTEARL 738
           ++QD PYGDITLKLT KL++A++
Sbjct: 721 VQQDEPYGDITLKLTQKLSKAQI 700

[Close]

BLAST of Sed0008374 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 344.0 bits (881), Expect = 3.0e-94
Identity = 276/744 (37.10%), Postives = 377/744 (50.67%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARK PLGTVWCAAH+  RL K  Y +  IP  VD IMF EVPLALRTSS+LL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           +GVVRIYSK++DYL +D ++L   + K  +  S+++ LPE+A QAP  S+TLP+  +LD 
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAK--AFVSTQVNLPEDARQAPPESVTLPQALNLDE 120

Query: 121 LELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVM-----MDLSHPGEP 180
            +L+ D   D + D HT S+E+ITL DQI  G D YVA+TFDED++     MD+    EP
Sbjct: 121 FDLEDDTL-DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEP 180

Query: 181 PDLGFKSMEEDAILPPHVDTTMEDLIGDEDVLNTILDEDIMPQSFRGVEVLEAVNFQEFD 240
                  ++ +       D    D     D   T    ++  + F  V+     N  E +
Sbjct: 181 VSRHTGEIDVETAHETGPDNEPRDSNIAFDT-GTYSPRNV-TEEFTEVQDPRQSNLTE-E 240

Query: 241 PSHQSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPGGDGTSEPHRLVDENLNQEN 300
               S + D  SP  VPE+E +R+AA D SP   P       D   E    +DE LN   
Sbjct: 241 RIPNSERNDATSPGTVPEIERMRDAAHDLSPTSHPSFAAQQQDVRVERTESLDETLN--- 300

Query: 301 LLMEDNITLPKTSLPLEGSTRPST----SLTSQETLDMNDTHISFRQSPMDFVLQPTPPQ 360
              E   T+P     +  S R S     S +        +    F       VLQP+PP 
Sbjct: 301 ---EKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADFVHPSPQLVLQPSPPP 360

Query: 361 QPKPRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEV 420
           QP+ R+RKRK  FD  TVL++K + + L+D SD L KR+K+P S L+ W++NN  RK++ 
Sbjct: 361 QPQRRARKRKN-FDGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNNQSRKDQN 420

Query: 421 FSHPFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPS 480
           F+ P  TG   DL N+F++DY+  K    +    S++   +  +V+ T E  + + +  S
Sbjct: 421 FNEPLFTGFSDDLRNVFEKDYVASKPHLAV----SDETLPEPASVSPTREAEV-EINPVS 480

Query: 481 PAPQVASPPHT-EIPPINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSS 540
           P P   +P  T ++ P       + S+G    P    +     +A  P          + 
Sbjct: 481 PIPDSTNPDSTVQLSPAQQTEDVLDSAG----PRPAHAESVATEAQSPR---------TF 540

Query: 541 SFSDMEIEHLRNVEGNRGDYTLADLIASSPRFMPSPRPFEGLDSPSSMISSSGMMSTPRP 600
              DM IEHLR+                 P +MPSP P           + SG   T   
Sbjct: 541 DNDDMGIEHLRD--------------GGFPVYMPSPPPRSSPFRTDDFTTQSGNWETE-- 600

Query: 601 VSFETSRSMFETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLE-ADSSPASRSSSRGT 660
            S+ T  S    P+ +      +N+ LS  +E     DE LYFLE   +SP    +S   
Sbjct: 601 -SYRTEPSTSTVPEDLP---GQRNLGLSPVSER---TDEELYFLEVGGNSPVGTPAS--- 660

Query: 661 QGVDSLSVRTRAVGRYL-QSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLK 720
           Q   +L+ R RA+ +YL Q  S   + S   + D SL  IL GK RKL ARMF+E LVLK
Sbjct: 661 QDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLK 687

Query: 721 SYDLIDIRQDLPYGDITLKLTAKL 733
           S  LID++QD PYGDI LKL   L
Sbjct: 721 SRGLIDMQQDRPYGDIALKLMPAL 687

[Close]

BLAST of Sed0008374 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 140.2 bits (352), Expect = 6.7e-33
Identity = 97/262 (37.02%), Postives = 139/262 (53.05%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYS  +LA+K PLGT+W AAHL+ +L K    +T I + VD+I+F E P+ALR SS+LL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHASSKLTLPENAYQAPFHSITLPETFDLDA 120
           LGVVRIYS++++YL  D    +L++++  +  S+ + LP     AP+HSITLPETFDLD 
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQ--AFRSAAVDLPPEESTAPYHSITLPETFDLDD 120

Query: 121 LEL-DIDVYDDGDPDTHTSSQEEITLAD----------QISL------GRDTYVAITFDE 180
            EL D +++     D H S++E+ITL D          Q  L      G  +  A+  DE
Sbjct: 121 FELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDE 180

Query: 181 DVMMDLSHPGEPPDLGFKSMEEDAIL---PPHVDTTMEDLIGDEDVLNTILDEDIMPQSF 240
            V  D    G   D G   ++ +A L    P +  +ME +             + MP  F
Sbjct: 181 AVFQDKDVIGS-DDEGVPGIDHNAYLDAAAPGIKDSMEGV------------SEAMPMDF 240

Query: 241 RGVEVLEAVNFQEFDPSHQSVQ 243
              +V +     EF    Q+ Q
Sbjct: 241 NEEQVEDLAMNNEFIEDAQAPQ 247

HSP 2 Score: 59.7 bits (143), Expect = 1.1e-08
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 656  SVRTRAVGRYLQSLSPIKSVSDDSTQDFSLDNILEGKKRKLCARMFYEILVLKSYDLIDI 715
            S RTRAV +YLQ+L      +++       D +L GK RK  +RMF+E LVLK+ D I +
Sbjct: 952  SSRTRAVAKYLQTL--FDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQV 1011

Query: 716  RQDLPYGDITLKLTAKLTEA 736
             Q  PY  I +K   KLT++
Sbjct: 1012 EQGKPYESIIIKPRPKLTKS 1029

HSP 3 Score: 37.7 bits (86), Expect = 4.7e-02
Identity = 51/246 (20.73%), Postives = 97/246 (39.43%), Query Frame = 0


Query: 244 DDDSPQNVPEVEVLREAAPDFSPRDIPMVPPPG--------GDGTSEPHRLVDENLNQEN 303
           D   P+ V  V   +    DF     P    PG         + T +     +  L  E+
Sbjct: 436 DFPPPEKVLAVPNRQGDGNDFMVESTPDKEDPGTCNDDAGNNNITGKKRTFTESTLTAES 495

Query: 304 LLMEDNITLPKTSLPLEGSTRPSTSLTSQETLDMNDTHISFRQSPMDFVLQPTPPQQ--- 363
           L   +++ L ++    +        L+S   L    + +  R +P   VL+P   ++   
Sbjct: 496 LNSVESVGLIQSKRTADSVPDDDDLLSS--ILVGKSSFLKMRPTP---VLEPATTKRLRS 555

Query: 364 -PKPRSRKRKQFFDKSTVLSSKFLKKALEDSSDLLCKRRKLPCSSLEVWKLNNSLRKEEV 423
            P+  + KRK   D   VL    +++ L ++ D+   R+K PC+  E+  L     ++ +
Sbjct: 556 APRSTATKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGL 615

Query: 424 FSHPFITGLCHDLDNIFKEDYIIKKCRTILVEEASEDLG---DDARNVASTSETFLCQED 475
           F  P  TG+  +L ++  E Y ++    I  ++    +G   D+  +V +  E    +  
Sbjct: 616 FKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSVTAVEENKTEESS 675

[Close]

BLAST of Sed0008374 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-21
Identity = 193/855 (22.57%), Postives = 326/855 (38.13%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEV-PLALRTSSYL 60
           MFYSH L++RK PLG +W AA+   +L K   + T IP  VD I+  E+  L  R  +YL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSKQIDYLKHDVDVLVLELR----KMHSHASSKLTLPENAYQAPFHSITLPET 120
           LLGVVRIYSK++D+L  D +  ++ ++    K  +   + ++LP +       SI LPE 
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPAS---IECFSIALPER 120

Query: 121 FDLDALELDI-DVYDDGDPDTHTSSQEEITLAD--QISLGRDTYVAITFD---------- 180
           F+LDA +L + + +  G+   H    E+ITL D  Q +   D Y    FD          
Sbjct: 121 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEEDLLFTFH 180

Query: 181 ----------------EDVMMDLSH-------------PGEPPDLGFKSME--------- 240
                            D+ +D  +               EP D    S +         
Sbjct: 181 ETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASRHRE 240

Query: 241 ----EDAILPPHVD-----------------TTMEDLIGDEDVLNTILDEDIMPQSFRGV 300
               +D +L P +                  T ++ L+   +     L  D   ++    
Sbjct: 241 DPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENLESE 300

Query: 301 EVLEAVNFQEFD-----PSH----QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPP 360
           +  +  + +E       PS     +++   +D P     +   +E  P+ S  + P   P
Sbjct: 301 KTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPSGATRINGEKE-IPEMSTLEKP--EP 360

Query: 361 PGGDGTSEPHRLVDENLNQENLLMED--------NITLPKTSLPLEGSTR---------- 420
               G+ +    V++  +     M D              + + L GS +          
Sbjct: 361 VSVTGSRDLQEGVEKCRDHNEAEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMTVSK 420

Query: 421 -PSTSLTSQET------LDMNDTHISFRQSPMDFVLQPTPPQQPKPR-SRKRKQFFDKST 480
            PS+   + +T         +   IS   +   F + PTP  +   R SRKRK   D   
Sbjct: 421 DPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLIDDEV 480

Query: 481 VLSSKFLKKALEDSSDLLCKRRKLP---CSSLEVWKLNNSLRKEEVFSHPFITGLCHDLD 540
           ++ +K +K+ +EDSS LL KRR +P   C      +  N  R    F  P I     DL 
Sbjct: 481 IIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRS---FLEPLIQYGSSDLQ 540

Query: 541 NIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQVASPPHTEIP 600
           ++F +   +K   T                  +  +T + +    S    V SP      
Sbjct: 541 SLFCQPIKLKNWAT----------------TGTPKDTKIARHKEKSSLDTVRSP------ 600

Query: 601 PINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSSFSDMEIEHLRNVEG 660
                   I SS +T +   I  +P  + A+L   K+      +S+   +E+       G
Sbjct: 601 ------GVILSSDQTENTQEIMETP--QAAALAGLKVTAG---NSNVVSVEMGASSTTSG 660

Query: 661 NRGDYTLADLIASSPRFMPSPRPF----EGLDSPSSMISSSGMMSTPR-PVSFETSRSMF 720
                  A      P  +    P     + + +P + + S  +   P  PV    S+  F
Sbjct: 661 TAHQTENAAETPVKPSVIAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKRFF 720

Query: 721 ETPQTIDEGLSTKNITLSNNTEPMSIVDENLYFLEADSSPASRSSSRGTQGVDSLSVRTR 736
           + P T  +     +   S    P     EN        +    +  R     ++ S RTR
Sbjct: 721 KDPGTCYKKSRPASPFTSFEEHPSVYYVENRDLDTILMNDEVNADERQDLQQETWSSRTR 780

[Close]

BLAST of Sed0008374 vs. TAIR 10
Match: AT5G40840.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 100.1 bits (248), Expect = 7.7e-21
Identity = 194/857 (22.64%), Postives = 329/857 (38.39%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEV-PLALRTSSYL 60
           MFYSH L++RK PLG +W AA+   +L K   + T IP  VD I+  E+  L  R  +YL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSKQIDYLKHDVDVLVLELR----KMHSHASSKLTLPENAYQAPFHSITLPET 120
           LLGVVRIYSK++D+L  D +  ++ ++    K  +   + ++LP +       SI LPE 
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPAS---IECFSIALPER 120

Query: 121 FDLDALELDI-DVYDDGDPDTHTSSQEEITLAD--QISLGRDTYVAITFD---------- 180
           F+LDA +L + + +  G+   H    E+ITL D  Q +   D Y    FD          
Sbjct: 121 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEEDLLFTFH 180

Query: 181 ----------------EDVMMDLSH-------------PGEPPDLGFKSME--------- 240
                            D+ +D  +               EP D    S +         
Sbjct: 181 ETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASRHRE 240

Query: 241 ----EDAILPPHVD-----------------TTMEDLIGDEDVLNTILDEDIMPQSFRGV 300
               +D +L P +                  T ++ L+   +     L  D   ++    
Sbjct: 241 DPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENLESE 300

Query: 301 EVLEAVNFQEFD-----PSH----QSVQKDDDSPQNVPEVEVLREAAPDFSPRDIPMVPP 360
           +  +  + +E       PS     +++   +D P     +   +E  P+ S  + P   P
Sbjct: 301 KTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPSGATRINGEKE-IPEMSTLEKP--EP 360

Query: 361 PGGDGTSEPHRLVDENLNQENLLMED--------NITLPKTSLPLEGSTR---------- 420
               G+ +    V++  +     M D              + + L GS +          
Sbjct: 361 VSVTGSRDLQEGVEKCRDHNEAEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMTVSK 420

Query: 421 -PSTSLTSQET------LDMNDTHISFRQSPMDFVLQPTPPQQPKPR-SRKRKQFFDKST 480
            PS+   + +T         +   IS   +   F + PTP  +   R SRKRK   D   
Sbjct: 421 DPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKCLIDDEV 480

Query: 481 VLSSKFLKKALEDSSDLLCKRRKLP---CSSLEVWKLNNSLRKEEVFSHPFITGLCHDLD 540
           ++ +K +K+ +EDSS LL KRR +P   C      +  N  R    F  P I     DL 
Sbjct: 481 IIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRS---FLEPLIQYGSSDLQ 540

Query: 541 NIFKEDYIIKKCRTILVEEASEDLGDDARNVASTSETFLCQEDAPSPAPQVASPPHTEIP 600
           ++F +   +K   T                  +  +T + +    S    V SP      
Sbjct: 541 SLFCQPIKLKNWAT----------------TGTPKDTKIARHKEKSSLDTVRSP------ 600

Query: 601 PINDPFRNIASSGETFSPLVIASSPTGEDASLPHFKIPPAVDPSSSFSDMEIEHLRNVEG 660
                   I SS +T +   I  +P  + A+L   K+      +S+   +E+       G
Sbjct: 601 ------GVILSSDQTENTQEIMETP--QAAALAGLKVTAG---NSNVVSVEMGASSTTSG 660

Query: 661 NRGDYTLADLIASSPRFMPSPRPF----EGLDSPSSMISSSGMMSTPR-PVSFETSRSMF 720
                  A      P  +    P     + + +P + + S  +   P  PV    S+  F
Sbjct: 661 TAHQTENAAETPVKPSVIAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKRFF 720

Query: 721 ETPQTIDEGLSTKNITLSNNTEPMSIVDEN--LYFLEADSSPASRSSSRGTQGVDSLSVR 736
           + P T  +     +   S    P     EN  L  +  +    +    +  Q  ++ S R
Sbjct: 721 KDPGTCYKKSRPASPFTSFEEHPSVYYVENRDLDTILMNDEQVNADERQDLQ-QETWSSR 780

[Close]

BLAST of Sed0008374 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 77.8 bits (190), Expect = 4.1e-14
Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = 0


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYQNTKIPLVVDAIMFGEVPLALRTSSYLL 60
           MFYSH LLARK PLG +W AA L  ++N+K      I  + + I+   VP+ALR S  L+
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILM 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVLELRKMHSHAS--SKLTLPENAYQAPFHSITLPETFDL 120
            GVV +Y +++  L  DV+  ++E+       S      LP+    A   ++TLPE  + 
Sbjct: 61  GGVVIVYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEA 120

Query: 121 DALELDIDVYDDGDPDTHTSSQEEITLADQISLGRDTYVAITFDEDVMMDLSHPGEPPDL 180
           D           GD +   +  +     D     + T++++  DE     +++  EP DL
Sbjct: 121 DF----------GDFEQTRNVPKFGNYMD----FQQTFISMRLDES---HVNNNPEPEDL 172

Query: 181 GFKSMEEDA 188
           G +  + DA
Sbjct: 181 GQQFHQADA 172

The following BLAST results are available for this feature:

BLAST of Sed0008374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528123.1	1.3e-296	74.02	sister chromatid cohesion 1 protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022934162.1	6.0e-294	73.49	sister chromatid cohesion 1 protein 3 [Cucurbita moschata] >XP_022934163.1 siste...	[more]
XP_022983911.1	2.4e-290	72.95	sister chromatid cohesion 1 protein 3 [Cucurbita maxima] >XP_022983912.1 sister ...	[more]
KAG6581597.1	6.0e-286	74.03	putative helicase MAGATAMA 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022158404.1	7.1e-279	70.12	sister chromatid cohesion 1 protein 3-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0008374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ19	4.3e-93	37.10	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	9.4e-32	37.02	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
O93310	1.7e-20	26.08	Double-strand-break repair protein rad21 homolog OS=Xenopus laevis OX=8355 GN=ra...	[more]
Q3SWX9	5.3e-19	26.05	Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 ...	[more]
O60216	9.1e-19	23.71	Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD2...	[more]

BLAST of Sed0008374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6W9	2.9e-294	73.49	sister chromatid cohesion 1 protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441...	[more]
A0A6J1J0M2	1.1e-290	72.95	sister chromatid cohesion 1 protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11148239...	[more]
A0A6J1DZA9	3.4e-279	70.12	sister chromatid cohesion 1 protein 3-like isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1DTE8	2.4e-264	66.94	sister chromatid cohesion 1 protein 3-like isoform X2 OS=Momordica charantia OX=...	[more]
A0A6J1DWN4	7.7e-263	66.76	sister chromatid cohesion 1 protein 3-like isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of Sed0008374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59550.1	3.0e-94	37.10	Rad21/Rec8-like family protein	[more]
AT5G16270.1	6.7e-33	37.02	sister chromatid cohesion 1 protein 4	[more]
AT5G40840.1	2.0e-21	22.57	Rad21/Rec8-like family protein	[more]
AT5G40840.2	7.7e-21	22.64	Rad21/Rec8-like family protein	[more]
AT5G05490.2	4.1e-14	30.69	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 659..736 e-value: 3.5E-11 score: 44.7
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 681..731 e-value: 7.2E-17 score: 60.4
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..102 e-value: 8.4E-30 score: 103.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..285
None	No IPR available	PANTHER	PTHR12585:SF55	SISTER CHROMATID COHESION 1 PROTEIN 3	coord: 1..735
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..735
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 659..732

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008374.1	Sed0008374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:1990414	replication-born double-strand break repair via sister chromatid exchange
biological_process	GO:0007130	synaptonemal complex assembly
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0034991	nuclear meiotic cohesin complex
cellular_component	GO:0034990	nuclear mitotic cohesin complex
cellular_component	GO:0000795	synaptonemal complex
cellular_component	GO:0008278	cohesin complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding