Sed0008354 (gene) Chayote v1

Overview


Name	Sed0008354
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RHOMBOID-like protein
Location	LG07: 7612953 .. 7616593 (+)
RNA-Seq Expression	Sed0008354
Synteny	Sed0008354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCGTCAACGACTCCACTCCTACAAAAAAACGCGATAGTGGTTCATATTAACCTCGAATGGACACTTCTTGCAGTGAAATGAATCGAAAAGCAAAACCCCACAAACTCAATCCCCCATTTTCGTCCACAATTCGATCAAAACGCCCAACCCCACTTGAAATTAGTGCGTATTTGATCGAAATGTAGAGGCTTCTTGTTCACTATGGCAGTTGTTCGCCCTTCCATTTCACTTCGCGAAGACCCTTCACCAAATTTCTTCACAATCTCAAGAACCCCACATCCAGTTTTCGATTCCAAGCATGGCCGGACAGGGTATTGAGAGCAGGGGAGAAGTGGGGAAGAACAGAGGAGGGAACAGTAGCTTCTCGTCTTCCTCTTATGTGATTGAAGATACTGAAACCCAATGGACTTCTTGGCTTGTTCCCATGGTTGTTGTGGCTAATATTGCTGTGTTTGTTGTGGTCATGTATGTCAATGATTGTCCCAAGCGTAATGATGGGTTTGAGGGGAAGTGTGTGGGCAGGTTTCTGGAGCGGTTCTCTTTTCAGCCTTTGAGGGAAAATCCTCTCTTTGGCCCGTCTGCTGCTATGTAAGAGTTGGTTTATTTCCCTTCATACCCATTTTCCAATTTTTGGTTTTACTTGTTTTCTATGGTTTAAATTTGGCCTGTGTTAGTGTTGGAGTTATGGTCATTGTGTTGCTTATTAAGGTTTGTTTGCTTGTATTTGTGTGATTAAGTTTCTCTGGCTTTTCTCTGGTTACTTTTTTTTTTTTTTGGAAACTGGGAAATCAAAGCTTAGCTTCACTACATCGGAGTAACCATGTCTGTCCCCGGGCACTGGTAGACATGGAAGGAATGAAGACAAGGGAGATGTTTGTTAATGTCCATATGTGAGTCTCGAACCTCGGGCCTTGAGGGTGCACACCTTCAAAGCCCAAGCATTCGACCACTGTGCCCCTCCTTGTGGACTCTTCTTCTCTAGTTACTTGTTATTGTATGGGTAAGTTTGGACGGTTAGGGTTGCTTTACAACTCCACTTGACCCTGTGTTCTTGCTATTTTGAAGTGTTTTCTGGTTTAACCATTATTGTTTTCTTGGCGTACTTATACTAAAGAAGCTCTGCGATCAATAATTTCAGTGCACTTTGGCTAATTGTTGTTTGGAGCATGGTGAGGTCTTAATCATATTCTCATTAATTGCTTCTCTTTAGTGAATTTTTGGTATAAATGTGCAGATATTTTTTTCTTTTGTACTTCTTCACAACGCTCTCCAACTGATGTATAACTTATCCAAGTAACTTTATAGATGACCAGGGAGAACAATGATAGAAGAACTAGCTTTCAGGTTTTTGGATACAGTTTTTTTCCAAACTCAATCTAAGTGGTGAACGTTCTTGGTCTTAAAATGGATGGTTGTAACATGTAATGCTTTTCAAACTTGAAAGGAGCCAACTAATATGGAGTTCTTTCTTTTATTGTAGATTGGAGAAGATGGGAGCTCTAGAGTCTACTAAAGTTGTGGACAAACATCAAGCATGGAGGTTGATCACCTGTATCTGGTTACATGCTGGCGTTTTTCACCTGCTCGCTAACATGCTATGCCTGGTCTTTATTGGCATTCGCCTTGAGCAGCAATTTGGGTTTTGTATGTAGTTTTTTTTTTGTTAAGTTAATTTTCTCAAAATCTAAAGGTAGTCAATGATTGCAAATTAGCTAATTTAAACAAGGTATTTCTGCAACAATTAGAAGTCTTGTGTTCAAATATAATTTTTTAGATTTTTCTCCGGATGGTTAAATGATCTGCTTCCATCTATTTTACTTTCATATATTACATGGAAGTCATTGCAAGATAGGGTAACATATTGCACACTAGCCGCATAATAGCTCTCCATAAGTATGTTCTTGGAGAATGGAACCCGTGCAGTACATTCTCTGTTCACTCCACGAGAACAGCTTTTATGCTTCTCTTAATGCTTTCCCTTACTGGGGCTGAAGTATGTTCACTGCAAGCTGATTTCTTCCTTTTATCACATGTGCAGTGCGGATCGGGGCTATTTACTTGCTCTCGGGATTTGGAGGGAGTGTACTTTCTTCTTTGTTCATTCGGAACAACATCTCTGTTGGTGCTTCTGGTGCTCTTTTTGGTCTTCTTGGAGCTATGCTTTCAGAGCTTTTCACAAACTGGACTATCTATACAAATAAGGTTGGAGAGCCAAATGCATTACCTCTTGCATGATAAATCTTACATAATTTCCTTCACGTTGTTTGTATTTTTTCTTGTGATGTATGTTCTTCTTACTATCTCACTTCTATACAGTCTGCTGCATTGTTCACACTTCTGGTTATTATTGTCATCAATCTCGGGATTGGGATTCTGCCACATGTTAATAACTTTGCCCATATTGGTGGATTTCTAACTGGATTTCTGCTTGGATTTGTATTGCTTCCTCGTCCCAAGTTCGGATGGCTAGAGCAACAGAATCTTCCCGGTGGAGGAGTTGGTCTGAACTCCAAATACAAGACTTACCAATATGTTCTATGGATTGTCTCGGCAATTCTGCTGATTGCAGGGTAAGACCACGTTCATATTTTCTTAGTAGTCTTTGAAGATCAAAGTGGTGACTTTGGTCTTAGACTCTTAGTAGCATAACTGATAACAGGTATAAATCCTTTGCATGATTGCGTACCGATTGGTTTTGGTTGTAAATATGCAGGTTCACTGTTGCACTTGTGATGCTGTTCCGTGGGGAAAATGCGAGTGATCACTGCCATTGGTGCCACTATTTGAACTGTGTTCCCACGTCAAAATGGAAATGTGATTAACAACATCCTTTAAGAGATTTTCATCATTTGGACCATTCAAAAGCTCCTGTAAATGTACAGTTCATTAGAAATATAGTAACACTCACAGTTTCTAGTTGCTTGGCTTTGCTGAACAATGATAAGGGTGCTATATTGAAGTATATGCTATTATTTATTGGTTTTGTTCTCATCGCACTGTATTAACTGTTCGCTTTGTTTCCAATAAATTCGAAAATTTATAAATATGAAACGATCTGTACGTAAAACAACTGCCTGTCAAATTATGGATCATAG

mRNA sequence

GAACCGTCAACGACTCCACTCCTACAAAAAAACGCGATAGTGGTTCATATTAACCTCGAATGGACACTTCTTGCAGTGAAATGAATCGAAAAGCAAAACCCCACAAACTCAATCCCCCATTTTCGTCCACAATTCGATCAAAACGCCCAACCCCACTTGAAATTAGTGCGTATTTGATCGAAATGTAGAGGCTTCTTGTTCACTATGGCAGTTGTTCGCCCTTCCATTTCACTTCGCGAAGACCCTTCACCAAATTTCTTCACAATCTCAAGAACCCCACATCCAGTTTTCGATTCCAAGCATGGCCGGACAGGGTATTGAGAGCAGGGGAGAAGTGGGGAAGAACAGAGGAGGGAACAGTAGCTTCTCGTCTTCCTCTTATGTGATTGAAGATACTGAAACCCAATGGACTTCTTGGCTTGTTCCCATGGTTGTTGTGGCTAATATTGCTGTGTTTGTTGTGGTCATGTATGTCAATGATTGTCCCAAGCGTAATGATGGGTTTGAGGGGAAGTGTGTGGGCAGGTTTCTGGAGCGGTTCTCTTTTCAGCCTTTGAGGGAAAATCCTCTCTTTGGCCCGTCTGCTGCTATATTGGAGAAGATGGGAGCTCTAGAGTCTACTAAAGTTGTGGACAAACATCAAGCATGGAGGTTGATCACCTGTATCTGGTTACATGCTGGCGTTTTTCACCTGCTCGCTAACATGCTATGCCTGGTCTTTATTGGCATTCGCCTTGAGCAGCAATTTGGGTTTTTGCGGATCGGGGCTATTTACTTGCTCTCGGGATTTGGAGGGAGTGTACTTTCTTCTTTGTTCATTCGGAACAACATCTCTGTTGGTGCTTCTGGTGCTCTTTTTGGTCTTCTTGGAGCTATGCTTTCAGAGCTTTTCACAAACTGGACTATCTATACAAATAAGTCTGCTGCATTGTTCACACTTCTGGTTATTATTGTCATCAATCTCGGGATTGGGATTCTGCCACATGTTAATAACTTTGCCCATATTGGTGGATTTCTAACTGGATTTCTGCTTGGATTTGTATTGCTTCCTCGTCCCAAGTTCGGATGGCTAGAGCAACAGAATCTTCCCGGTGGAGGAGTTGGTCTGAACTCCAAATACAAGACTTACCAATATGTTCTATGGATTGTCTCGGCAATTCTGCTGATTGCAGGGTTCACTGTTGCACTTGTGATGCTGTTCCGTGGGGAAAATGCGAGTGATCACTGCCATTGGTGCCACTATTTGAACTGTGTTCCCACGTCAAAATGGAAATGTGATTAACAACATCCTTTAAGAGATTTTCATCATTTGGACCATTCAAAAGCTCCTGTAAATGTACAGTTCATTAGAAATATAGTAACACTCACAGTTTCTAGTTGCTTGGCTTTGCTGAACAATGATAAGGGTGCTATATTGAAGTATATGCTATTATTTATTGGTTTTGTTCTCATCGCACTGTATTAACTGTTCGCTTTGTTTCCAATAAATTCGAAAATTTATAAATATGAAACGATCTGTACGTAAAACAACTGCCTGTCAAATTATGGATCATAG

Coding sequence (CDS)

ATGGCCGGACAGGGTATTGAGAGCAGGGGAGAAGTGGGGAAGAACAGAGGAGGGAACAGTAGCTTCTCGTCTTCCTCTTATGTGATTGAAGATACTGAAACCCAATGGACTTCTTGGCTTGTTCCCATGGTTGTTGTGGCTAATATTGCTGTGTTTGTTGTGGTCATGTATGTCAATGATTGTCCCAAGCGTAATGATGGGTTTGAGGGGAAGTGTGTGGGCAGGTTTCTGGAGCGGTTCTCTTTTCAGCCTTTGAGGGAAAATCCTCTCTTTGGCCCGTCTGCTGCTATATTGGAGAAGATGGGAGCTCTAGAGTCTACTAAAGTTGTGGACAAACATCAAGCATGGAGGTTGATCACCTGTATCTGGTTACATGCTGGCGTTTTTCACCTGCTCGCTAACATGCTATGCCTGGTCTTTATTGGCATTCGCCTTGAGCAGCAATTTGGGTTTTTGCGGATCGGGGCTATTTACTTGCTCTCGGGATTTGGAGGGAGTGTACTTTCTTCTTTGTTCATTCGGAACAACATCTCTGTTGGTGCTTCTGGTGCTCTTTTTGGTCTTCTTGGAGCTATGCTTTCAGAGCTTTTCACAAACTGGACTATCTATACAAATAAGTCTGCTGCATTGTTCACACTTCTGGTTATTATTGTCATCAATCTCGGGATTGGGATTCTGCCACATGTTAATAACTTTGCCCATATTGGTGGATTTCTAACTGGATTTCTGCTTGGATTTGTATTGCTTCCTCGTCCCAAGTTCGGATGGCTAGAGCAACAGAATCTTCCCGGTGGAGGAGTTGGTCTGAACTCCAAATACAAGACTTACCAATATGTTCTATGGATTGTCTCGGCAATTCTGCTGATTGCAGGGTTCACTGTTGCACTTGTGATGCTGTTCCGTGGGGAAAATGCGAGTGATCACTGCCATTGGTGCCACTATTTGAACTGTGTTCCCACGTCAAAATGGAAATGTGATTAA

Protein sequence

MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKCD

Homology

[Close]

BLAST of Sed0008354 vs. NCBI nr
Match: XP_022984650.1 (RHOMBOID-like protein 2 [Cucurbita maxima])

HSP 1 Score: 588.2 bits (1515), Expect = 4.4e-164
Identity = 289/329 (87.84%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVF+VVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFIVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG EGKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLEGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LITCIWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IYL+SG GGSVLSSLFI+NNI
Sbjct: 121 LITCIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYLVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL+SKY TYQYVLWI+SA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLSSKYNTYQYVLWIISAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. NCBI nr
Match: KAG6576737.1 (RHOMBOID-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.3e-163
Identity = 290/329 (88.15%), Postives = 306/329 (93.01%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVFVVVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFVVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG  GKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLHGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LITCIWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IYL+SG GGSVLSSLFI+NNI
Sbjct: 121 LITCIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYLVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL SKY TYQYVLWIVSA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLRSKYNTYQYVLWIVSAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. NCBI nr
Match: XP_022922982.1 (RHOMBOID-like protein 3 [Cucurbita moschata])

HSP 1 Score: 585.1 bits (1507), Expect = 3.7e-163
Identity = 288/329 (87.54%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVFVVVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFVVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG +GKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLQGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LITCIWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IY++SG GGSVLSSLFI+NNI
Sbjct: 121 LITCIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYVVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL SKY TYQY+LWIVSA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLRSKYNTYQYLLWIVSAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. NCBI nr
Match: XP_023552384.1 (RHOMBOID-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162
Identity = 288/329 (87.54%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVFVVVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFVVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG +GKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLQGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LIT IWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IYL+SG GGSVLSSLFI+NNI
Sbjct: 121 LITSIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYLVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL+SKY TYQYVLWI+SA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLSSKYNTYQYVLWIISAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. NCBI nr
Match: XP_008439182.1 (PREDICTED: RHOMBOID-like protein 2 [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 7.0e-162
Identity = 288/326 (88.34%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           MA Q IESR EV KNR GNSS SSS+YVIEDTETQWTSWLVPM VVANIAVF+VVMY+N+
Sbjct: 11  MARQDIESR-EV-KNR-GNSSISSSTYVIEDTETQWTSWLVPMFVVANIAVFIVVMYINN 70

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK NDG EGKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWRLIT
Sbjct: 71  CPKHNDGLEGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWRLIT 130

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           CIWLHAGVFHLLANMLCLVFIGIRLEQQFGF+RIG IYL+SGFGGSVLSSLFI+NNISVG
Sbjct: 131 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSSLFIQNNISVG 190

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASG+LFGLLGAMLSELFTNWTIYTNK+ AL TLLVIIVIN GIGILPHVNNFAHIGGFLT
Sbjct: 191 ASGSLFGLLGAMLSELFTNWTIYTNKAMALATLLVIIVINFGIGILPHVNNFAHIGGFLT 250

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GFLLGFVLLPRPK+GWLEQ+NLPGG +GL+SKYKTYQYVLWIVS +LLIAGFT+ALVMLF
Sbjct: 251 GFLLGFVLLPRPKYGWLEQRNLPGGSIGLSSKYKTYQYVLWIVSVVLLIAGFTIALVMLF 310

Query: 301 RGENASDHCHWCHYLNCVPTSKWKCD 327
           RG NA+D CHWCHYLNCV TS+WKCD
Sbjct: 311 RGVNANDRCHWCHYLNCVSTSRWKCD 333

[Close]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 2.1e-124
Identity = 225/330 (68.18%), Postives = 265/330 (80.30%), Query Frame = 0


Query: 4   QGIESRGEVGKNRGGNSSF-----SSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYV 63
           +GI SRG   +NR G         SS+ +      ++WTSWLVPM VVAN+AVFVV M+V
Sbjct: 17  RGIGSRGG-DRNRIGPPPLPVALSSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFV 76

Query: 64  NDCPKRNDG--FEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAW 123
           N+CP   +     G CV +FL R SF+PLR NPLFGPS+  LEK+GALE +KVV+K + W
Sbjct: 77  NNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGW 136

Query: 124 RLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNN 183
           RL+TCIWLHAGV HL ANML LVFIGIRLEQQFGF+RIG IYLLSG GGSVLSSLFIRN+
Sbjct: 137 RLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNS 196

Query: 184 ISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIG 243
           ISVGASGALFGLLG+MLSELFTNWTIY+NK AAL TLL +I+INL IGILPHV+NFAH+G
Sbjct: 197 ISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVG 256

Query: 244 GFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVAL 303
           GF+TGFLLGF+LL RP+F WL ++++P  G  L  KYKTYQY+LW++S +LLIAGF VAL
Sbjct: 257 GFVTGFLLGFILLARPQFKWLAREHMP-QGTPLRYKYKTYQYLLWLLSLVLLIAGFVVAL 316

Query: 304 VMLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           +MLFRGEN +DHC WCHYL CVPTS W+CD
Sbjct: 317 LMLFRGENGNDHCRWCHYLRCVPTSSWRCD 344

[Close]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.4e-120
Identity = 212/325 (65.23%), Postives = 255/325 (78.46%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           MA + +E  G+  KNRG N+++    Y     ET WTSWL+P +VVAN+AVF+ VM+VND
Sbjct: 1   MANRDVERVGK--KNRGANNNY---FYEESSGETHWTSWLIPAIVVANLAVFIAVMFVND 60

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK+  G   +CV RFL RFSFQPL+ENPLFGPS++ LEKMGALE  KVV +HQ WRL++
Sbjct: 61  CPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLS 120

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           C+WLHAG+ HLL NML L+FIGIRLEQQFGF+R+G IYL+SG GGS+LSSLF++ +ISVG
Sbjct: 121 CMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVG 180

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASGALFGLLGAMLSEL TNWTIY NK+AAL TLL II INL +G+LP V+NFAHIGGFLT
Sbjct: 181 ASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLT 240

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GF LGFVLL RP++GW   +           KY  YQYVL++VS +LL+ G TVALVMLF
Sbjct: 241 GFCLGFVLLVRPQYGWEASRT---NTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLF 300

Query: 301 RGENASDHCHWCHYLNCVPTSKWKC 326
           +GEN + HC WCHYL+C PTSKW C
Sbjct: 301 KGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.6e-111
Identity = 192/292 (65.75%), Postives = 232/292 (79.45%), Query Frame = 0


Query: 36  WTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSA 95
           W  WLVP +VVANIA+F + M++N+CPK +      C+ RFL RF+FQP++ENPL GPS+
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNS----AYCLARFLGRFAFQPMKENPLLGPSS 113

Query: 96  AILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIG 155
             LEKMGAL+ + VV KH+ WRL TCIWLHAGVFH+LANML L+FIGIRLEQ+FGF+RIG
Sbjct: 114 LTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIG 173

Query: 156 AIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLV 215
            +Y++SGFGGS+LSSLF R  ISVGASGALFGLLGAMLSEL TNWTIY NK AAL TL+ 
Sbjct: 174 LLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIF 233

Query: 216 IIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGG--GVGLNSKY 275
           II INL +GILPHV+NFAH+GGF +GFLLGFV L RP++G+  Q+N P G       SK+
Sbjct: 234 IIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKH 293

Query: 276 KTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKC 326
           K YQYVLWI S +LLIAG+T  LV+L RG + + HC WCHYL+C+PTS W C
Sbjct: 294 KPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341

[Close]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 7.9e-108
Identity = 184/293 (62.80%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 33  ETQWTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFG 92
           +TQWT+WL P +VVAN+++F+VVMY NDCPK   G  G CV + L RFSFQPLRENP  G
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 93  PSAAILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFL 152
           PS++ LEK+GAL+  KVV  ++ WRLIT +WLHAG+ HL+ NM  ++  GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 153 RIGAIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFT 212
           RIG IYL+SGFGGS+LS+LF++ +ISVGASGAL GL+GAMLSEL TNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 213 LLVIIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSK 272
            L II INL IG+LP V+NFAHIGG LTGF LGF+LL +P+ GW E +N    G    SK
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 273 YKTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKC 326
           Y   QYVL+ V+A+L++AG TV LVMLF GEN + HC WCH L+C PTSKW C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot
Match: F4JBM4 (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 6.9e-104
Identity = 175/291 (60.14%), Postives = 225/291 (77.32%), Query Frame = 0


Query: 36  WTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSA 95
           W  WL+P  VVAN+AVFV+ MYVN+CPK++    G C   FL RFSFQ  RENPL GPS+
Sbjct: 64  WFPWLIPCFVVANVAVFVITMYVNNCPKKS----GDCFADFLGRFSFQNTRENPLLGPSS 123

Query: 96  AILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIG 155
             L+ MG L+  KVV   + WRL++C WLH GV HLL NML L+FIGIR+E++FGF+RIG
Sbjct: 124 LTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIG 183

Query: 156 AIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLV 215
            +YL+SGFGGS+LS+LF+R+NISVGASGA+FGLLG MLSE+F NWTIY+NK   + TL++
Sbjct: 184 LLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVL 243

Query: 216 IIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKT 275
           I+ +NLG+G+LP V+NFAHIGGF TGFLLGFVLL RP +GW+ Q+N PG       ++K 
Sbjct: 244 IVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPG---AKPHRFKI 303

Query: 276 YQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           YQ +LW +S ++L+AGF V L+ LF   + ++HC WCHYL+CVPTSKW C+
Sbjct: 304 YQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCN 347

[Close]

BLAST of Sed0008354 vs. ExPASy TrEMBL
Match: A0A6J1J963 (RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482870 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164
Identity = 289/329 (87.84%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVF+VVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFIVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG EGKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLEGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LITCIWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IYL+SG GGSVLSSLFI+NNI
Sbjct: 121 LITCIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYLVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL+SKY TYQYVLWI+SA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLSSKYNTYQYVLWIISAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. ExPASy TrEMBL
Match: A0A6J1E4W5 (RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430803 PE=3 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.8e-163
Identity = 288/329 (87.54%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MAGQGIESR---GEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMY 60
           MA Q IESR   G V KNR G++SFSSSSYVIEDTETQWTSWLVPM VVANIAVFVVVMY
Sbjct: 1   MARQDIESREVAGGVAKNR-GSTSFSSSSYVIEDTETQWTSWLVPMFVVANIAVFVVVMY 60

Query: 61  VNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWR 120
           +N+CPK NDG +GKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWR
Sbjct: 61  INNCPKHNDGLQGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWR 120

Query: 121 LITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNI 180
           LITCIWLHAGVFHL+ANMLCLVFIGIRLEQQFGF+RIG IY++SG GGSVLSSLFI+NNI
Sbjct: 121 LITCIWLHAGVFHLIANMLCLVFIGIRLEQQFGFVRIGVIYVVSGLGGSVLSSLFIQNNI 180

Query: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGG 240
           SVGASGALFGLLGAMLSELFTNWTIYTNK+AAL TLLVII INLGIGILPHVNNFAH+GG
Sbjct: 181 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALITLLVIIAINLGIGILPHVNNFAHVGG 240

Query: 241 FLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALV 300
           F TGFLLGFVLLPRPK+GWLEQ+NLPGGGVGL SKY TYQY+LWIVSA+LLIAGFTVALV
Sbjct: 241 FFTGFLLGFVLLPRPKYGWLEQRNLPGGGVGLRSKYNTYQYLLWIVSAVLLIAGFTVALV 300

Query: 301 MLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           MLFRGENA+  CHWCHYLNCVPTS+WKCD
Sbjct: 301 MLFRGENANSRCHWCHYLNCVPTSRWKCD 328

[Close]

BLAST of Sed0008354 vs. ExPASy TrEMBL
Match: A0A5A7SR04 (RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00580 PE=3 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.4e-162
Identity = 288/326 (88.34%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           MA Q IESR EV KNR GNSS SSS+YVIEDTETQWTSWLVPM VVANIAVF+VVMY+N+
Sbjct: 1   MARQDIESR-EV-KNR-GNSSISSSTYVIEDTETQWTSWLVPMFVVANIAVFIVVMYINN 60

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK NDG EGKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWRLIT
Sbjct: 61  CPKHNDGLEGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWRLIT 120

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           CIWLHAGVFHLLANMLCLVFIGIRLEQQFGF+RIG IYL+SGFGGSVLSSLFI+NNISVG
Sbjct: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSSLFIQNNISVG 180

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASG+LFGLLGAMLSELFTNWTIYTNK+ AL TLLVIIVIN GIGILPHVNNFAHIGGFLT
Sbjct: 181 ASGSLFGLLGAMLSELFTNWTIYTNKAMALATLLVIIVINFGIGILPHVNNFAHIGGFLT 240

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GFLLGFVLLPRPK+GWLEQ+NLPGG +GL+SKYKTYQYVLWIVS +LLIAGFT+ALVMLF
Sbjct: 241 GFLLGFVLLPRPKYGWLEQRNLPGGSIGLSSKYKTYQYVLWIVSVVLLIAGFTIALVMLF 300

Query: 301 RGENASDHCHWCHYLNCVPTSKWKCD 327
           RG NA+D CHWCHYLNCV TS+WKCD
Sbjct: 301 RGVNANDRCHWCHYLNCVSTSRWKCD 323

[Close]

BLAST of Sed0008354 vs. ExPASy TrEMBL
Match: A0A1S3AYU4 (RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103484054 PE=3 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.4e-162
Identity = 288/326 (88.34%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           MA Q IESR EV KNR GNSS SSS+YVIEDTETQWTSWLVPM VVANIAVF+VVMY+N+
Sbjct: 11  MARQDIESR-EV-KNR-GNSSISSSTYVIEDTETQWTSWLVPMFVVANIAVFIVVMYINN 70

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK NDG EGKCV RFLERFSFQPLRENPLFGPSAA LEKMGALESTKVV+KHQAWRLIT
Sbjct: 71  CPKHNDGLEGKCVARFLERFSFQPLRENPLFGPSAATLEKMGALESTKVVNKHQAWRLIT 130

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           CIWLHAGVFHLLANMLCLVFIGIRLEQQFGF+RIG IYL+SGFGGSVLSSLFI+NNISVG
Sbjct: 131 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSSLFIQNNISVG 190

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASG+LFGLLGAMLSELFTNWTIYTNK+ AL TLLVIIVIN GIGILPHVNNFAHIGGFLT
Sbjct: 191 ASGSLFGLLGAMLSELFTNWTIYTNKAMALATLLVIIVINFGIGILPHVNNFAHIGGFLT 250

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GFLLGFVLLPRPK+GWLEQ+NLPGG +GL+SKYKTYQYVLWIVS +LLIAGFT+ALVMLF
Sbjct: 251 GFLLGFVLLPRPKYGWLEQRNLPGGSIGLSSKYKTYQYVLWIVSVVLLIAGFTIALVMLF 310

Query: 301 RGENASDHCHWCHYLNCVPTSKWKCD 327
           RG NA+D CHWCHYLNCV TS+WKCD
Sbjct: 311 RGVNANDRCHWCHYLNCVSTSRWKCD 333

[Close]

BLAST of Sed0008354 vs. ExPASy TrEMBL
Match: A0A0A0L6G0 (RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G180410 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.6e-158
Identity = 281/326 (86.20%), Postives = 301/326 (92.33%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           M  Q IESR EV KNR G+SS SSSSY+IEDTETQWTSWLVPM VVANIAVF+VVMY+N+
Sbjct: 1   MNRQDIESR-EV-KNR-GSSSLSSSSYLIEDTETQWTSWLVPMFVVANIAVFIVVMYINN 60

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK ND FEGKCV RFLERFSFQPLRENPLFGPSA  LEKMGALESTKVV+KHQAWRLIT
Sbjct: 61  CPKHNDEFEGKCVARFLERFSFQPLRENPLFGPSATTLEKMGALESTKVVNKHQAWRLIT 120

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           CIWLHAGVFHLLANMLCLVFIG RLEQQFGF+RIG IYL+SGFGGSVLSSL I+NNISVG
Sbjct: 121 CIWLHAGVFHLLANMLCLVFIGTRLEQQFGFVRIGVIYLVSGFGGSVLSSLLIQNNISVG 180

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASG+LFGLLGAMLSELFTNWTIYTNK+AAL TLLVII IN GIG+LPHVNNFAHIGGFLT
Sbjct: 181 ASGSLFGLLGAMLSELFTNWTIYTNKAAALATLLVIIFINFGIGLLPHVNNFAHIGGFLT 240

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GFLLGF LLPRPK+GWLEQ+NLPG G GL+SKYKTYQYVLWIVS +LLIAGFT+ALVMLF
Sbjct: 241 GFLLGFALLPRPKYGWLEQRNLPGVGAGLSSKYKTYQYVLWIVSVVLLIAGFTIALVMLF 300

Query: 301 RGENASDHCHWCHYLNCVPTSKWKCD 327
           R ENA+D CHWCHYLNCVPTS+W+CD
Sbjct: 301 REENANDRCHWCHYLNCVPTSRWQCD 323

[Close]

BLAST of Sed0008354 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 446.8 bits (1148), Expect = 1.5e-125
Identity = 225/330 (68.18%), Postives = 265/330 (80.30%), Query Frame = 0


Query: 4   QGIESRGEVGKNRGGNSSF-----SSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYV 63
           +GI SRG   +NR G         SS+ +      ++WTSWLVPM VVAN+AVFVV M+V
Sbjct: 17  RGIGSRGG-DRNRIGPPPLPVALSSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFV 76

Query: 64  NDCPKRNDG--FEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAW 123
           N+CP   +     G CV +FL R SF+PLR NPLFGPS+  LEK+GALE +KVV+K + W
Sbjct: 77  NNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGW 136

Query: 124 RLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNN 183
           RL+TCIWLHAGV HL ANML LVFIGIRLEQQFGF+RIG IYLLSG GGSVLSSLFIRN+
Sbjct: 137 RLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNS 196

Query: 184 ISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIG 243
           ISVGASGALFGLLG+MLSELFTNWTIY+NK AAL TLL +I+INL IGILPHV+NFAH+G
Sbjct: 197 ISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVG 256

Query: 244 GFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVAL 303
           GF+TGFLLGF+LL RP+F WL ++++P  G  L  KYKTYQY+LW++S +LLIAGF VAL
Sbjct: 257 GFVTGFLLGFILLARPQFKWLAREHMP-QGTPLRYKYKTYQYLLWLLSLVLLIAGFVVAL 316

Query: 304 VMLFRGENASDHCHWCHYLNCVPTSKWKCD 327
           +MLFRGEN +DHC WCHYL CVPTS W+CD
Sbjct: 317 LMLFRGENGNDHCRWCHYLRCVPTSSWRCD 344

[Close]

BLAST of Sed0008354 vs. TAIR 10
Match: AT1G63120.1 (RHOMBOID-like 2 )

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121
Identity = 212/325 (65.23%), Postives = 255/325 (78.46%), Query Frame = 0


Query: 1   MAGQGIESRGEVGKNRGGNSSFSSSSYVIEDTETQWTSWLVPMVVVANIAVFVVVMYVND 60
           MA + +E  G+  KNRG N+++    Y     ET WTSWL+P +VVAN+AVF+ VM+VND
Sbjct: 1   MANRDVERVGK--KNRGANNNY---FYEESSGETHWTSWLIPAIVVANLAVFIAVMFVND 60

Query: 61  CPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSAAILEKMGALESTKVVDKHQAWRLIT 120
           CPK+  G   +CV RFL RFSFQPL+ENPLFGPS++ LEKMGALE  KVV +HQ WRL++
Sbjct: 61  CPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLS 120

Query: 121 CIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIGAIYLLSGFGGSVLSSLFIRNNISVG 180
           C+WLHAG+ HLL NML L+FIGIRLEQQFGF+R+G IYL+SG GGS+LSSLF++ +ISVG
Sbjct: 121 CMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVG 180

Query: 181 ASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLVIIVINLGIGILPHVNNFAHIGGFLT 240
           ASGALFGLLGAMLSEL TNWTIY NK+AAL TLL II INL +G+LP V+NFAHIGGFLT
Sbjct: 181 ASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLT 240

Query: 241 GFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSKYKTYQYVLWIVSAILLIAGFTVALVMLF 300
           GF LGFVLL RP++GW   +           KY  YQYVL++VS +LL+ G TVALVMLF
Sbjct: 241 GFCLGFVLLVRPQYGWEASRT---NTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLF 300

Query: 301 RGENASDHCHWCHYLNCVPTSKWKC 326
           +GEN + HC WCHYL+C PTSKW C
Sbjct: 301 KGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Sed0008354 vs. TAIR 10
Match: AT2G29050.1 (RHOMBOID-like 1 )

HSP 1 Score: 403.3 bits (1035), Expect = 1.9e-112
Identity = 192/292 (65.75%), Postives = 232/292 (79.45%), Query Frame = 0


Query: 36  WTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFGPSA 95
           W  WLVP +VVANIA+F + M++N+CPK +      C+ RFL RF+FQP++ENPL GPS+
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNS----AYCLARFLGRFAFQPMKENPLLGPSS 113

Query: 96  AILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFLRIG 155
             LEKMGAL+ + VV KH+ WRL TCIWLHAGVFH+LANML L+FIGIRLEQ+FGF+RIG
Sbjct: 114 LTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIG 173

Query: 156 AIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFTLLV 215
            +Y++SGFGGS+LSSLF R  ISVGASGALFGLLGAMLSEL TNWTIY NK AAL TL+ 
Sbjct: 174 LLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIF 233

Query: 216 IIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGG--GVGLNSKY 275
           II INL +GILPHV+NFAH+GGF +GFLLGFV L RP++G+  Q+N P G       SK+
Sbjct: 234 IIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKH 293

Query: 276 KTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKC 326
           K YQYVLWI S +LLIAG+T  LV+L RG + + HC WCHYL+C+PTS W C
Sbjct: 294 KPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341

[Close]

BLAST of Sed0008354 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 391.7 bits (1005), Expect = 5.6e-109
Identity = 184/293 (62.80%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 33  ETQWTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFG 92
           +TQWT+WL P +VVAN+++F+VVMY NDCPK   G  G CV + L RFSFQPLRENP  G
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 93  PSAAILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFL 152
           PS++ LEK+GAL+  KVV  ++ WRLIT +WLHAG+ HL+ NM  ++  GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 153 RIGAIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFT 212
           RIG IYL+SGFGGS+LS+LF++ +ISVGASGAL GL+GAMLSEL TNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 213 LLVIIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSK 272
            L II INL IG+LP V+NFAHIGG LTGF LGF+LL +P+ GW E +N    G    SK
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 273 YKTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKC 326
           Y   QYVL+ V+A+L++AG TV LVMLF GEN + HC WCH L+C PTSKW C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Sed0008354 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 391.7 bits (1005), Expect = 5.6e-109
Identity = 184/293 (62.80%), Postives = 226/293 (77.13%), Query Frame = 0


Query: 33  ETQWTSWLVPMVVVANIAVFVVVMYVNDCPKRNDGFEGKCVGRFLERFSFQPLRENPLFG 92
           +TQWT+WL P +VVAN+++F+VVMY NDCPK   G  G CV + L RFSFQPLRENP  G
Sbjct: 15  DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 74

Query: 93  PSAAILEKMGALESTKVVDKHQAWRLITCIWLHAGVFHLLANMLCLVFIGIRLEQQFGFL 152
           PS++ LEK+GAL+  KVV  ++ WRLIT +WLHAG+ HL+ NM  ++  GIRLEQQFGF+
Sbjct: 75  PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 134

Query: 153 RIGAIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYTNKSAALFT 212
           RIG IYL+SGFGGS+LS+LF++ +ISVGASGAL GL+GAMLSEL TNWTIY +K  AL +
Sbjct: 135 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 194

Query: 213 LLVIIVINLGIGILPHVNNFAHIGGFLTGFLLGFVLLPRPKFGWLEQQNLPGGGVGLNSK 272
            L II INL IG+LP V+NFAHIGG LTGF LGF+LL +P+ GW E +N    G    SK
Sbjct: 195 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 254

Query: 273 YKTYQYVLWIVSAILLIAGFTVALVMLFRGENASDHCHWCHYLNCVPTSKWKC 326
           Y   QYVL+ V+A+L++AG TV LVMLF GEN + HC WCH L+C PTSKW C
Sbjct: 255 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

The following BLAST results are available for this feature:

BLAST of Sed0008354 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984650.1	4.4e-164	87.84	RHOMBOID-like protein 2 [Cucurbita maxima]	[more]
KAG6576737.1	1.3e-163	88.15	RHOMBOID-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022922982.1	3.7e-163	87.54	RHOMBOID-like protein 3 [Cucurbita moschata]	[more]
XP_023552384.1	1.1e-162	87.54	RHOMBOID-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_008439182.1	7.0e-162	88.34	PREDICTED: RHOMBOID-like protein 2 [Cucumis melo]	[more]

BLAST of Sed0008354 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYP1	2.1e-124	68.18	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
Q9CAN1	2.4e-120	65.23	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
Q0WQX7	2.6e-111	65.75	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q8VZ48	7.9e-108	62.80	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
F4JBM4	6.9e-104	60.14	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]

BLAST of Sed0008354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J963	2.1e-164	87.84	RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482870 PE=3 SV=1	[more]
A0A6J1E4W5	1.8e-163	87.54	RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430803 PE=3 SV=1	[more]
A0A5A7SR04	3.4e-162	88.34	RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23...	[more]
A0A1S3AYU4	3.4e-162	88.34	RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103484054 PE=3 SV=1	[more]
A0A0A0L6G0	6.6e-158	86.20	RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G180410 PE=3 SV=1	[more]

BLAST of Sed0008354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07250.1	1.5e-125	68.18	RHOMBOID-like protein 3	[more]
AT1G63120.1	1.7e-121	65.23	RHOMBOID-like 2	[more]
AT2G29050.1	1.9e-112	65.75	RHOMBOID-like 1	[more]
AT1G12750.1	5.6e-109	62.80	RHOMBOID-like protein 6	[more]
AT1G12750.2	5.6e-109	62.80	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 111..252 e-value: 1.1E-42 score: 145.5
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 36..248 e-value: 5.1E-38 score: 132.7
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 36..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR22936:SF86	RHOMBOID-LIKE PROTEIN 3	coord: 18..324
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 18..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008354.1	Sed0008354.1	mRNA
Sed0008354.2	Sed0008354.2	mRNA
Sed0008354.3	Sed0008354.3	mRNA
Sed0008354.4	Sed0008354.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity