Sed0008324 (gene) Chayote v1

Overview


Name	Sed0008324
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C2H2-type domain-containing protein
Location	LG01: 69856620 .. 69857486 (-)
RNA-Seq Expression	Sed0008324
Synteny	Sed0008324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAATGTCAGTTCACTATAATTGCCCCTTCTTCCATGGCTACTCAGCTTGAGCTTGGATTTCAATATTCATCTTCTCTTCTTCATCTTGCCGAAACGACTCGCGACGGGCAGAATCAACACGGTTTAAACCCGATGCAAACGCCGGACGTTGTCGACGAGGATGACTCTTGGGAAGTCAGGGCTTTCGCCGAGGACACGGCTAATGTCATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTCAGATCGGCTCAAGCCCTAGGCGGTCATATGAATGTTCACCGCCGCGACCGAGCTCGGCTCCACCAAGCCGTACCGAACACGATCAAACCCTCTAATTCCTCTCCATCCTCTACTTCCAATTCTTTCATCATCCCATCTCCTGATTTTAATGGTGGAGGATTGTGTGTTCTCTACCAATTCCCAAACCCTAATTGTTTTCATCAAAATGCCTACATTCATCACTCACCCAATTCTTCTCTTTTCTCCATGCCCCATCATTCCTTCAACAACTGCTTGCCCTCAACCGGCCCGATCACTGACCTCCGTGCCGGAGCGAGTACTTTCTCTCGACCGTCATTCACCGAAGAACAACCCTTCTCAACAACATCCATGGAAAATGGCAACCAAGAGCTTGATCTAGAGCTGAGGCTTGGACATGGTCCTTCAACTCAAACTCTAATGGAAAAGGGACAAAAGATCTCAAATCTTGAAGCTGCATGTTTGAGGAAGAGATCATCAGATTGATCAATTTGTAAGATATATATACATTAATTTCATCAAGCCTTTTTATTAGTCTTTTTTTTTCATCATCATAAGGGCAATTTCTTTTTTTAATTTTGG

mRNA sequence

ATTCAATGTCAGTTCACTATAATTGCCCCTTCTTCCATGGCTACTCAGCTTGAGCTTGGATTTCAATATTCATCTTCTCTTCTTCATCTTGCCGAAACGACTCGCGACGGGCAGAATCAACACGGTTTAAACCCGATGCAAACGCCGGACGTTGTCGACGAGGATGACTCTTGGGAAGTCAGGGCTTTCGCCGAGGACACGGCTAATGTCATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTCAGATCGGCTCAAGCCCTAGGCGGTCATATGAATGTTCACCGCCGCGACCGAGCTCGGCTCCACCAAGCCGTACCGAACACGATCAAACCCTCTAATTCCTCTCCATCCTCTACTTCCAATTCTTTCATCATCCCATCTCCTGATTTTAATGGTGGAGGATTGTGTGTTCTCTACCAATTCCCAAACCCTAATTGTTTTCATCAAAATGCCTACATTCATCACTCACCCAATTCTTCTCTTTTCTCCATGCCCCATCATTCCTTCAACAACTGCTTGCCCTCAACCGGCCCGATCACTGACCTCCGTGCCGGAGCGAGTACTTTCTCTCGACCGTCATTCACCGAAGAACAACCCTTCTCAACAACATCCATGGAAAATGGCAACCAAGAGCTTGATCTAGAGCTGAGGCTTGGACATGGTCCTTCAACTCAAACTCTAATGGAAAAGGGACAAAAGATCTCAAATCTTGAAGCTGCATGTTTGAGGAAGAGATCATCAGATTGATCAATTTGTAAGATATATATACATTAATTTCATCAAGCCTTTTTATTAGTCTTTTTTTTTCATCATCATAAGGGCAATTTCTTTTTTTAATTTTGG

Coding sequence (CDS)

ATGGCTACTCAGCTTGAGCTTGGATTTCAATATTCATCTTCTCTTCTTCATCTTGCCGAAACGACTCGCGACGGGCAGAATCAACACGGTTTAAACCCGATGCAAACGCCGGACGTTGTCGACGAGGATGACTCTTGGGAAGTCAGGGCTTTCGCCGAGGACACGGCTAATGTCATGGGAACTACTTGGCCTCCTAGGTCTTACACTTGCACTTATTGTAGAAGAGAGTTCAGATCGGCTCAAGCCCTAGGCGGTCATATGAATGTTCACCGCCGCGACCGAGCTCGGCTCCACCAAGCCGTACCGAACACGATCAAACCCTCTAATTCCTCTCCATCCTCTACTTCCAATTCTTTCATCATCCCATCTCCTGATTTTAATGGTGGAGGATTGTGTGTTCTCTACCAATTCCCAAACCCTAATTGTTTTCATCAAAATGCCTACATTCATCACTCACCCAATTCTTCTCTTTTCTCCATGCCCCATCATTCCTTCAACAACTGCTTGCCCTCAACCGGCCCGATCACTGACCTCCGTGCCGGAGCGAGTACTTTCTCTCGACCGTCATTCACCGAAGAACAACCCTTCTCAACAACATCCATGGAAAATGGCAACCAAGAGCTTGATCTAGAGCTGAGGCTTGGACATGGTCCTTCAACTCAAACTCTAATGGAAAAGGGACAAAAGATCTCAAATCTTGAAGCTGCATGTTTGAGGAAGAGATCATCAGATTGA

Protein sequence

MATQLELGFQYSSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPSTGPITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKISNLEAACLRKRSSD

Homology

[Close]

BLAST of Sed0008324 vs. NCBI nr
Match: XP_038888762.1 (transcriptional regulator SUPERMAN-like [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 6.6e-88
Identity = 191/265 (72.08%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 1   MATQLELGFQYSSSLLHLAETTRDGQNQHGLNPMQTPD-VVDEDDSWEVRAFAEDTANVM 60
           MA +LELGFQY SSL HLAE TRDGQN + LNPMQ PD VVD+DDSWEVRAFAEDTANVM
Sbjct: 1   MAAELELGFQYPSSLPHLAEITRDGQNPNSLNPMQMPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNSF 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQA P++  P   S SS SNSF
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAPPSSSNPMKPS-SSNSNSF 120

Query: 121 IIPSPDFNGGG-LCVLYQFPNPNCFH--------QNAYIHHSPNSSLFSMPHHSFNNCLP 180
           IIP+PDFNGGG LC+LYQFPNPN  +         NAYI HSP SSLFSM HHSFN   P
Sbjct: 121 IIPTPDFNGGGSLCLLYQFPNPNSINGGINTPSTLNAYI-HSP-SSLFSMSHHSFNTFSP 180

Query: 181 STGPIT-------DLRAGASTFSRPSFTEEQPFSTTSM--ENGNQELDLELRLGHGP--S 240
           S+  ++       D R   STFS+   +++Q FS+TS    NG+QELDLELRLGHGP  S
Sbjct: 181 SSTSLSPAFPVNDDHRLETSTFSQ---SDQQHFSSTSTMENNGSQELDLELRLGHGPPSS 240

Query: 241 TQTLMEKGQKISNLEAACLRKRSSD 245
           TQTLMEKGQKISNLEAACLRKRSSD
Sbjct: 241 TQTLMEKGQKISNLEAACLRKRSSD 259

[Close]

BLAST of Sed0008324 vs. NCBI nr
Match: XP_022931230.1 (zinc finger protein 10-like [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-83
Identity = 179/254 (70.47%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 1   MATQLELGFQY--SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANV 60
           MA  L+L FQY  SSS L L++ TRDG   +  +PMQTPDVVD+DDSWEVRAFAEDTA+V
Sbjct: 1   MAAHLDLLFQYSSSSSFLPLSQITRDGSTPNSSSPMQTPDVVDDDDSWEVRAFAEDTADV 60

Query: 61  MGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP---SNSSPSST 120
           MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP   S+SS SST
Sbjct: 61  MGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSST 120

Query: 121 SNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPSTG-- 180
           SNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST   
Sbjct: 121 SNSFIIPAHDFNGGGLCVLYPFPNP-------YSIRSP-SSLFSMSHHSFNNFMPSTSPA 180

Query: 181 ---PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 240
              PI + RAGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PSTQTLMEKG KI
Sbjct: 181 SAFPIRNHRAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTQTLMEKGHKI 240

Query: 241 SNLEAACLRKRSSD 245
           SN EAACLRKRSSD
Sbjct: 241 SNFEAACLRKRSSD 240

[Close]

BLAST of Sed0008324 vs. NCBI nr
Match: KAG7036187.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 3.7e-83
Identity = 180/257 (70.04%), Postives = 198/257 (77.04%), Query Frame = 0


Query: 1   MATQLELGFQY--SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANV 60
           MA  L+L FQY  SSS L L++ TRDG   + L+PMQTPDVVDEDDSWEVRAFAEDTA+V
Sbjct: 1   MAAHLDLLFQYSSSSSFLPLSQITRDGSAPNSLSPMQTPDVVDEDDSWEVRAFAEDTADV 60

Query: 61  MGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP------SNSSP 120
           MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP      S+SS 
Sbjct: 61  MGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSS 120

Query: 121 SSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPST 180
           SSTSNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST
Sbjct: 121 SSTSNSFIIPAHDFNGGGLCVLYPFPNP-------YSIRSP-SSLFSMSHHSFNNFMPST 180

Query: 181 G-----PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKG 240
                 PI + RAGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PSTQTLMEK 
Sbjct: 181 SPASAFPIRNHRAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTQTLMEKR 240

Query: 241 QKISNLEAACLRKRSSD 245
            KISN EAACLRKRSSD
Sbjct: 241 HKISNFEAACLRKRSSD 243

[Close]

BLAST of Sed0008324 vs. NCBI nr
Match: XP_022995519.1 (transcriptional regulator SUPERMAN-like [Cucurbita maxima])

HSP 1 Score: 316.6 bits (810), Expect = 1.8e-82
Identity = 178/254 (70.08%), Postives = 197/254 (77.56%), Query Frame = 0


Query: 1   MATQLELGFQY-SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANVM 60
           MA  L+L FQY SSS L L++ TR G   + L+PMQTPDVVD+DDSWEVRAFAEDTA+VM
Sbjct: 1   MAAHLDLLFQYSSSSFLPLSQITRHGLTPNSLSPMQTPDVVDDDDSWEVRAFAEDTADVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP-------SNSSP 120
           GTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP       S+SS 
Sbjct: 61  GTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSSS 120

Query: 121 SSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPST 180
           S TSNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST
Sbjct: 121 SLTSNSFIIPAHDFNGGGLCVLYPFPNP-------YNIRSP-SSLFSMSHHSFNNFMPST 180

Query: 181 G--PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 240
              PI + RAGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PSTQTLMEKG KI
Sbjct: 181 SAFPIRNHRAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTQTLMEKGHKI 240

Query: 241 SNLEAACLRKRSSD 245
           SN EAACLRKRSSD
Sbjct: 241 SNFEAACLRKRSSD 240

[Close]

BLAST of Sed0008324 vs. NCBI nr
Match: KAG6606245.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 177/256 (69.14%), Postives = 196/256 (76.56%), Query Frame = 0


Query: 1   MATQLELGFQY--SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANV 60
           MA  L+L FQY  SSS L L++ TRDG   + L+PMQTPDVVD+DDSWEVRAFAEDTA+V
Sbjct: 1   MAAHLDLLFQYSSSSSFLPLSQVTRDGSAPNSLSPMQTPDVVDDDDSWEVRAFAEDTADV 60

Query: 61  MGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP-----SNSSPS 120
           MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP     S+SS S
Sbjct: 61  MGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSS 120

Query: 121 STSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPSTG 180
           STSNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST 
Sbjct: 121 STSNSFIIPAHDFNGGGLCVLYPFPNP-------YSIRSP-SSLFSMSHHSFNNFMPSTS 180

Query: 181 -----PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQ 240
                PI +  AGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PST TLMEK  
Sbjct: 181 PASAFPIRNHPAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTHTLMEKRH 240

Query: 241 KISNLEAACLRKRSSD 245
           KISN EAACLRKRSSD
Sbjct: 241 KISNFEAACLRKRSSD 242

[Close]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-19
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 37  PDVVDEDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRAR 96
           P   +++ SWE  AFAED A   G+ WPPRSYTC++CRREF+SAQALGGHMNVHRRDRAR
Sbjct: 10  PKKSNKESSWEELAFAEDDA--AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 69

Query: 97  LHQAVPNTIKP-SNSSPSSTSN 118
           L QA    + P S+SSP   S+
Sbjct: 70  LKQADDQYLFPKSSSSPEYPSH 89

[Close]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 66/178 (37.08%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 53  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSP 112
           +D   ++G +WPPRSYTC++C+REFRSAQALGGHMNVHRRDRARL             SP
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---------LQQSP 91

Query: 113 SSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPST 172
           SS+S     PSP            +PNPN  +  + + +SP       PHHS     P+ 
Sbjct: 92  SSSST----PSP-----------PYPNPN--YSYSTMANSP------PPHHSPLTLFPTL 151

Query: 173 GPITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 231
            P +  R  A      S     P S  + EN  +     L +  G +T+   +   KI
Sbjct: 152 SPPSSPRYRAGLIRSLS-----PKSKHTPENACKTKKSSLLVEAGEATRFTSKDACKI 172

[Close]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14
Identity = 49/93 (52.69%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 31  LNPMQTPDVVDEDDSW---EVRAF--AEDTANVMGTTWPPRSYTCTYCRREFRSAQALGG 90
           L PM T    D    W   E RAF  AE+     G  WPPRSY+C++C REF+SAQALGG
Sbjct: 13  LRPMVTRPSSDGTLFWPFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGG 72

Query: 91  HMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNS 119
           HMNVHRRDRARL        K  + SPSST  +
Sbjct: 73  HMNVHRRDRARL--------KQQSLSPSSTDQA 97

[Close]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 63  WPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNSFIIP 122
           WPP++YTC++CRREFRSAQALGGHMNVHRRDRA+L Q      +P + +P +       P
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN------P 102

Query: 123 SPDFN 128
           +P+F+
Sbjct: 104 NPNFS 102

[Close]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 66  RSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSPSSTS 117
           RSY C++C R F +AQALGGHMN+HRRDRA+L Q +    K    + S  S
Sbjct: 33  RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDAS 83

[Close]

BLAST of Sed0008324 vs. ExPASy TrEMBL
Match: A0A6J1EYW0 (zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437469 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.2e-84
Identity = 179/254 (70.47%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 1   MATQLELGFQY--SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANV 60
           MA  L+L FQY  SSS L L++ TRDG   +  +PMQTPDVVD+DDSWEVRAFAEDTA+V
Sbjct: 1   MAAHLDLLFQYSSSSSFLPLSQITRDGSTPNSSSPMQTPDVVDDDDSWEVRAFAEDTADV 60

Query: 61  MGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP---SNSSPSST 120
           MGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP   S+SS SST
Sbjct: 61  MGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSST 120

Query: 121 SNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPSTG-- 180
           SNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST   
Sbjct: 121 SNSFIIPAHDFNGGGLCVLYPFPNP-------YSIRSP-SSLFSMSHHSFNNFMPSTSPA 180

Query: 181 ---PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 240
              PI + RAGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PSTQTLMEKG KI
Sbjct: 181 SAFPIRNHRAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTQTLMEKGHKI 240

Query: 241 SNLEAACLRKRSSD 245
           SN EAACLRKRSSD
Sbjct: 241 SNFEAACLRKRSSD 240

[Close]

BLAST of Sed0008324 vs. ExPASy TrEMBL
Match: A0A6J1K623 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491029 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.0e-83
Identity = 178/254 (70.08%), Postives = 197/254 (77.56%), Query Frame = 0


Query: 1   MATQLELGFQY-SSSLLHLAETTRDGQNQHGLNPMQTPDVVDEDDSWEVRAFAEDTANVM 60
           MA  L+L FQY SSS L L++ TR G   + L+PMQTPDVVD+DDSWEVRAFAEDTA+VM
Sbjct: 1   MAAHLDLLFQYSSSSFLPLSQITRHGLTPNSLSPMQTPDVVDDDDSWEVRAFAEDTADVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKP-------SNSSP 120
           GTTWPPRSYTCT+CRREFRSAQALGGHMNVHRRDRARLHQA  N IKP       S+SS 
Sbjct: 61  GTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSSS 120

Query: 121 SSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPST 180
           S TSNSFIIP+ DFNGGGLCVLY FPNP       Y   SP SSLFSM HHSFNN +PST
Sbjct: 121 SLTSNSFIIPAHDFNGGGLCVLYPFPNP-------YNIRSP-SSLFSMSHHSFNNFMPST 180

Query: 181 G--PITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 240
              PI + RAGAS+F + S ++EQ     +ME+ NQE+DLELRLG  PSTQTLMEKG KI
Sbjct: 181 SAFPIRNHRAGASSFPQ-SLSDEQ-----AMESSNQEVDLELRLGQAPSTQTLMEKGHKI 240

Query: 241 SNLEAACLRKRSSD 245
           SN EAACLRKRSSD
Sbjct: 241 SNFEAACLRKRSSD 240

[Close]

BLAST of Sed0008324 vs. ExPASy TrEMBL
Match: A0A5D3E693 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004360 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 183/267 (68.54%), Postives = 200/267 (74.91%), Query Frame = 0


Query: 1   MATQLELGFQYSSSLLHLAETTRDGQNQHGLNPMQTPD-VVDEDDSWEVRAFAEDTANVM 60
           MA +L LGFQYSSSL HL+ETTRDGQN +G+NPMQTPD VVD+DDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVP----NTIKPSNSSPSST 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLH   P    N +KPS++S SS 
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTS-SSN 120

Query: 121 SNSFIIPSPDFNGGG-LCVLYQFPNPNCFH---------QNAYIHHSPNSSLFSMPHHSF 180
           SNSFIIP+PDFNGGG LC+LYQFPNPN  +          NAYI HSP SSLFSMPHHSF
Sbjct: 121 SNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYI-HSP-SSLFSMPHHSF 180

Query: 181 NNCLPSTGPITDLRAGASTFSRPSFTEEQPFSTTSMENGN-----QELDLELRLGHGP-- 240
           N   PS+   T L A            E    + SMEN N     + LDLELRLGHGP  
Sbjct: 181 NT-YPSS---TSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPS 240

Query: 241 STQTLMEKGQ-KISNLEAACLRKRSSD 245
           STQ LMEKG+ K+SN EAACL+KRSSD
Sbjct: 241 STQNLMEKGEKKVSNSEAACLKKRSSD 260

[Close]

BLAST of Sed0008324 vs. ExPASy TrEMBL
Match: A0A1S3CRJ1 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103503534 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 183/267 (68.54%), Postives = 200/267 (74.91%), Query Frame = 0


Query: 1   MATQLELGFQYSSSLLHLAETTRDGQNQHGLNPMQTPD-VVDEDDSWEVRAFAEDTANVM 60
           MA +L LGFQYSSSL HL+ETTRDGQN +G+NPMQTPD VVD+DDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVP----NTIKPSNSSPSST 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLH   P    N +KPS++S SS 
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTS-SSN 120

Query: 121 SNSFIIPSPDFNGGG-LCVLYQFPNPNCFH---------QNAYIHHSPNSSLFSMPHHSF 180
           SNSFIIP+PDFNGGG LC+LYQFPNPN  +          NAYI HSP SSLFSMPHHSF
Sbjct: 121 SNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSPSTLNAYI-HSP-SSLFSMPHHSF 180

Query: 181 NNCLPSTGPITDLRAGASTFSRPSFTEEQPFSTTSMENGN-----QELDLELRLGHGP-- 240
           N   PS+   T L A            E    + SMEN N     + LDLELRLGHGP  
Sbjct: 181 NT-YPSS---TSLSAAFPMNDNNHRRLETSTYSASMENNNGSSQDEVLDLELRLGHGPPS 240

Query: 241 STQTLMEKGQ-KISNLEAACLRKRSSD 245
           STQ LMEKG+ K+SN EAACL+KRSSD
Sbjct: 241 STQNLMEKGEKKVSNSEAACLKKRSSD 260

[Close]

BLAST of Sed0008324 vs. ExPASy TrEMBL
Match: A0A0A0LF36 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G902400 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.4e-80
Identity = 184/274 (67.15%), Postives = 202/274 (73.72%), Query Frame = 0


Query: 1   MATQLELGFQYSSSLLHLAETTRDGQNQHGLNPMQTPD-VVDEDDSWEVRAFAEDTANVM 60
           MA +L LGFQYSSSL HL+ETTRDGQN +G+NPMQTPD VVD+DDSWEVRAFAEDTANVM
Sbjct: 1   MAAELVLGFQYSSSLPHLSETTRDGQNPNGVNPMQTPDVVVDDDDSWEVRAFAEDTANVM 60

Query: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVP----NTIKPSNSSPSST 120
           GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLH   P    N +KPS++S SS 
Sbjct: 61  GTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHHQAPSSSSNPMKPSSTS-SSN 120

Query: 121 SNSFIIPSPDFNGGG-LCVLYQFPNPNCFH---------QNAYIHHSPNSSLFSMPHHSF 180
           SNSFIIP+PDFNGGG LC+LYQFPNPN  +          NAYI HSP SSLFSMPHHSF
Sbjct: 121 SNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGINTSSSTLNAYI-HSP-SSLFSMPHHSF 180

Query: 181 NNCLPSTG-----PITD---LRAGASTFSRPSFTEEQPFSTTSMENGN----QELDLELR 240
           N    ST      P+ D    R   ST+S             SMEN N    + LDLELR
Sbjct: 181 NTYPSSTSVSQAFPMNDDNHRRLETSTYS------------ASMENNNGSQDEVLDLELR 240

Query: 241 LGHGP--STQTLMEKGQ-KISNLEAACLRKRSSD 245
           LGHGP  STQ LMEKG+ KIS+ EAACL++RSSD
Sbjct: 241 LGHGPPSSTQNLMEKGEKKISDSEAACLKERSSD 259

[Close]

BLAST of Sed0008324 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 82/201 (40.80%), Postives = 109/201 (54.23%), Query Frame = 0


Query: 32  NPMQTPDVVDEDDSWEVRAFAEDT-ANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVH 91
           NP +  ++ D+D+SWEV+AF +DT  N+ GTTWPPRSYTC +CRREFRSAQALGGHMNVH
Sbjct: 9   NPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVH 68

Query: 92  RRDRA--RLHQAVPNTIKP-----------SNSSPSSTSNSFIIPSPDFNGGGLCVLYQF 151
           RRDRA  R HQ   +T+             ++ +P   + + II S   N  GL   YQ 
Sbjct: 69  RRDRASSRAHQG--STVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGLSHFYQL 128

Query: 152 PNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPSTGPITDLRAGASTFSRPSFTEEQPFS 211
            NP+    N+    +   +    P +   + L S   +       ST    S    +  +
Sbjct: 129 QNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRLIEYSTGDDESIGSMKEAT 188

Query: 212 TTSMENGNQELDLELRLGHGP 219
            TS++    ELDLELRLGH P
Sbjct: 189 GTSVD----ELDLELRLGHHP 203

[Close]

BLAST of Sed0008324 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 37  PDVVDEDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRAR 96
           P   +++ SWE  AFAED A   G+ WPPRSYTC++CRREF+SAQALGGHMNVHRRDRAR
Sbjct: 10  PKKSNKESSWEELAFAEDDA--AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 69

Query: 97  LHQAVPNTIKP-SNSSPSSTSN 118
           L QA    + P S+SSP   S+
Sbjct: 70  LKQADDQYLFPKSSSSPEYPSH 89

[Close]

BLAST of Sed0008324 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16
Identity = 66/178 (37.08%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 53  EDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSP 112
           +D   ++G +WPPRSYTC++C+REFRSAQALGGHMNVHRRDRARL             SP
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR---------LQQSP 91

Query: 113 SSTSNSFIIPSPDFNGGGLCVLYQFPNPNCFHQNAYIHHSPNSSLFSMPHHSFNNCLPST 172
           SS+S     PSP            +PNPN  +  + + +SP       PHHS     P+ 
Sbjct: 92  SSSST----PSP-----------PYPNPN--YSYSTMANSP------PPHHSPLTLFPTL 151

Query: 173 GPITDLRAGASTFSRPSFTEEQPFSTTSMENGNQELDLELRLGHGPSTQTLMEKGQKI 231
            P +  R  A      S     P S  + EN  +     L +  G +T+   +   KI
Sbjct: 152 SPPSSPRYRAGLIRSLS-----PKSKHTPENACKTKKSSLLVEAGEATRFTSKDACKI 172

[Close]

BLAST of Sed0008324 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-15
Identity = 49/93 (52.69%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 31  LNPMQTPDVVDEDDSW---EVRAF--AEDTANVMGTTWPPRSYTCTYCRREFRSAQALGG 90
           L PM T    D    W   E RAF  AE+     G  WPPRSY+C++C REF+SAQALGG
Sbjct: 13  LRPMVTRPSSDGTLFWPFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGG 72

Query: 91  HMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNS 119
           HMNVHRRDRARL        K  + SPSST  +
Sbjct: 73  HMNVHRRDRARL--------KQQSLSPSSTDQA 97

[Close]

BLAST of Sed0008324 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 63  WPPRSYTCTYCRREFRSAQALGGHMNVHRRDRARLHQAVPNTIKPSNSSPSSTSNSFIIP 122
           WPP++YTC++CRREFRSAQALGGHMNVHRRDRA+L Q      +P + +P +       P
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN------P 102

Query: 123 SPDFN 128
           +P+F+
Sbjct: 104 NPNFS 102

The following BLAST results are available for this feature:

BLAST of Sed0008324 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888762.1	6.6e-88	72.08	transcriptional regulator SUPERMAN-like [Benincasa hispida]	[more]
XP_022931230.1	1.3e-83	70.47	zinc finger protein 10-like [Cucurbita moschata]	[more]
KAG7036187.1	3.7e-83	70.04	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995519.1	1.8e-82	70.08	transcriptional regulator SUPERMAN-like [Cucurbita maxima]	[more]
KAG6606245.1	1.2e-81	69.14	Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0008324 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80942	3.0e-19	62.20	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	2.6e-15	37.08	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	2.9e-14	52.69	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SLB8	1.9e-13	55.38	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	7.7e-07	52.94	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of Sed0008324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYW0	6.2e-84	70.47	zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437469 PE=4 S...	[more]
A0A6J1K623	9.0e-83	70.08	transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491...	[more]
A0A5D3E693	1.4e-80	68.54	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CRJ1	1.4e-80	68.54	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103503534 ...	[more]
A0A0A0LF36	5.4e-80	67.15	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G902400 P...	[more]

BLAST of Sed0008324 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17810.1	1.2e-26	40.80	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	2.1e-20	62.20	zinc-finger protein 10	[more]
AT3G23130.1	1.9e-16	37.08	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	2.1e-15	52.69	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	1.3e-14	55.38	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 68..90 e-value: 0.0057 score: 25.9
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 70..90
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 68..95 score: 11.343733
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 58..118 e-value: 1.4E-5 score: 26.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 68..92 e-value: 2.7E-7 score: 30.4
None	No IPR available	PANTHER	PTHR45801:SF5	OS07G0101800 PROTEIN	coord: 33..216
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 33..216
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 65..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008324.1	Sed0008324.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022610	biological adhesion
biological_process	GO:0019058	viral life cycle