Sed0008227 (gene) Chayote v1

Overview


Name	Sed0008227
Type	gene
Organism	Sechium edule (Chayote v1)
Description	serine-rich protein-related
Location	LG11: 1674182 .. 1676249 (+)
RNA-Seq Expression	Sed0008227
Synteny	Sed0008227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAGCCAAACACGGCTACTCTTCTCTCTCTAAGTTTCTCTCTCTACTGTAACGAAAATGGCGGCAACTTCTCGAAGATCAAACGGATCAGTTCTCCGATCACTCTCCCCGTCGGCAAGATTCTCCGGTCACTGGAGTTCCTCTCCATCGGCGTTTGCGTCGTCCACCTCCAGTTTCTCCTCCAGATCCGCCACGTCCTTCTTCTGCAGATCGACTTCTCCGTCGCGCGTGACGCTCCGCGGCTCGTCGCCGGTGCGGTTTTCTCCGAACAGATCCGTGTCTGTTTCGCCTCGCAACGCAGTGAAGAATCAGGTGATGCAGAGGCAGAGCAGTTCGAAGAGAACCTGTATGTGTTCTCCAACAACGCATCCTGGCTCGTTCCGGTGCAGTCTCCACAAAGGTATGGTTTCGCAAACGTACGCGCCGTACTCGTCGAATCGGCTGAATGCTCGTAGATCTGCGATGACGAACTCTCTGGTTCGGATCGGAGGCGTTGAAGGCGATCTCGTGAAGCGAGCCTTAGCGGCGTTGATTCGCCCTTCCTCGCATCAACTACGCCGCAGAGTCGTTGATTTCAAGCCGAGGCGTAGCCGGTTGTCGATTATGTCGAGATCTGAAGAAACATTATAGTCACTCGGTATGTTAATCGAAACCGAAGCAACTCTGCGGTTAGCAATTGATTCACGCAGTGATTCCGATCTCCGGCTCCGACGAATCGTACGGTAACGGACATTGTTCATCATTACAGAACTCTGAAATCTTGTTTGTGTACAAATTAATATGTTATACGGACTGGATATGAATTTCGTTTGTGTTCATCTGAAATCGTGAAATTGAGACTAAATCCTGAAATCGAATACTGATTAATCAAACTCGCATGAACTAAAAAGTTGTATAAACCTCACTAATCGAACCAGACGTAGATTTAGGGTTTGGAAAATCCTCCATTGGCAGTTTTGATTTGATTTGCCTCTGTTGCGTTCTCTGTGTTTGATCGTGTATTCCGTTATCTCCGCCGTCTGATTTAACGGTTTCCATCTATTCATTTCATTTTCATTGCAAGTTTTCAATAACCATAAAATCAGTGATCAGATCAAATCAGTGATTTTTTGTTATATATATATATATATTTTTTTTTTAATTTATGAAAAAGGTAAATTGGTTTTGTTTTTGTAATGTGTTTGTTTCATTTCTTTATTTTAATTTTTTTCTGTTTTTTTCTTTGCAGGGATTGGTTCTCGCCGGCATAAGGAGTAGGGGTGTACATGGGTGGGTTGGATAGGATTAAGAGTAATTTTTTTATCAATCCAAAGATTTGGATTGATCAATTTTTTAACCCAACCCTATATTTTCGGGTTGGGTTGAGTTGAATTCATCGGTTCAAAAGGATTAAAAGTTGAAGGCAAGATTATAAATTCGACGAAAACACTGATTATTTCAATATTTGGGAGTAAAAAATCGGTATAAAATTTGACTAAATATAAAGCTAATTTTGTAAAGAATATGAGATTTTTTTAAAAAAGATAAGAATTAATTTTAAAATTTTAAAAAGATTGTATTTAACCTGATAAGGGATAAAAAAAGATTGGAAAAGGTTGGAGAAAGATGGAAGTTTACATGCTCATAGAAGAAAAAAAAAACATAAAGTAAGAAAAGATGTACAACTACCAAGCTATCGACTTTATACTACAAAGATATGTTAAGAAATATATATTTATATTCAGGTTCCGGGTTGAATCCAACCCAAATCCCGTGAATCCGCGAACCGACCCAAAAATTCGGATTTCCTAAAAATTTAACCCAACCCAAATTTTAAAAAATATAACCCAACCCAACCTTTGGGTTGGGTAGTCCGGGTAGCTCGGGAACCTTTGGGTTGGGTAGTTCGGGTAGCTCGGGTTATCGGTTTTTTTGTACACCCCTAATAAGGAGTAATTTTAACATAAAAAAAATTATTGAATTAAAAAGTAAATAAAAAATACATTATCAGCAGCAATAGATAAGGATTTTTTTTTTAAGTTGAAAATACACATTTTGATCGCAGGATCGTTTGATTTTATTTGAGGA

mRNA sequence

CAACAGCCAAACACGGCTACTCTTCTCTCTCTAAGTTTCTCTCTCTACTGTAACGAAAATGGCGGCAACTTCTCGAAGATCAAACGGATCAGTTCTCCGATCACTCTCCCCGTCGGCAAGATTCTCCGGTCACTGGAGTTCCTCTCCATCGGCGTTTGCGTCGTCCACCTCCAGTTTCTCCTCCAGATCCGCCACGTCCTTCTTCTGCAGATCGACTTCTCCGTCGCGCGTGACGCTCCGCGGCTCGTCGCCGGTGCGGTTTTCTCCGAACAGATCCGTGTCTGTTTCGCCTCGCAACGCAGTGAAGAATCAGGTGATGCAGAGGCAGAGCAGTTCGAAGAGAACCTGTATGTGTTCTCCAACAACGCATCCTGGCTCGTTCCGGTGCAGTCTCCACAAAGGTATGGTTTCGCAAACGTACGCGCCGTACTCGTCGAATCGGCTGAATGCTCGTAGATCTGCGATGACGAACTCTCTGGTTCGGATCGGAGGCGTTGAAGGCGATCTCGTGAAGCGAGCCTTAGCGGCGTTGATTCGCCCTTCCTCGCATCAACTACGCCGCAGAGTCGTTGATTTCAAGCCGAGGCGTAGCCGGTTGTCGATTATGTCGAGATCTGAAGAAACATTATAGTCACTCGGTATGTTAATCGAAACCGAAGCAACTCTGCGGTTAGCAATTGATTCACGCAGTGATTCCGATCTCCGGCTCCGACGAATCGGATTGGTTCTCGCCGGCATAAGGAGTAGGGGTGTACATGGGTGGGTTGGATAGGATTAAGAGTAATTTTTTTATCAATCCAAAGATTTGGATTGATCAATTTTTTAACCCAACCCTATATTTTCGGGTTGGGTTGAGTTGAATTCATCGGTTCAAAAGGATTAAAAGTTGAAGGCAAGATTATAAATTCGACGAAAACACTGATTATTTCAATATTTGGGAGTAAAAAATCGGTATAAAATTTGACTAAATATAAAGCTAATTTTGTAAAGAATATGAGATTTTTTTAAAAAAGATAAGAATTAATTTTAAAATTTTAAAAAGATTGTATTTAACCTGATAAGGGATAAAAAAAGATTGGAAAAGGTTGGAGAAAGATGGAAGTTTACATGCTCATAGAAGAAAAAAAAAACATAAAGTAAGAAAAGATGTACAACTACCAAGCTATCGACTTTATACTACAAAGATATGTTAAGAAATATATATTTATATTCAGGTTCCGGGTTGAATCCAACCCAAATCCCGTGAATCCGCGAACCGACCCAAAAATTCGGATTTCCTAAAAATTTAACCCAACCCAAATTTTAAAAAATATAACCCAACCCAACCTTTGGGTTGGGTAGTCCGGGTAGCTCGGGAACCTTTGGGTTGGGTAGTTCGGGTAGCTCGGGTTATCGGTTTTTTTGTACACCCCTAATAAGGAGTAATTTTAACATAAAAAAAATTATTGAATTAAAAAGTAAATAAAAAATACATTATCAGCAGCAATAGATAAGGATTTTTTTTTTAAGTTGAAAATACACATTTTGATCGCAGGATCGTTTGATTTTATTTGAGGA

Coding sequence (CDS)

ATGGCGGCAACTTCTCGAAGATCAAACGGATCAGTTCTCCGATCACTCTCCCCGTCGGCAAGATTCTCCGGTCACTGGAGTTCCTCTCCATCGGCGTTTGCGTCGTCCACCTCCAGTTTCTCCTCCAGATCCGCCACGTCCTTCTTCTGCAGATCGACTTCTCCGTCGCGCGTGACGCTCCGCGGCTCGTCGCCGGTGCGGTTTTCTCCGAACAGATCCGTGTCTGTTTCGCCTCGCAACGCAGTGAAGAATCAGGTGATGCAGAGGCAGAGCAGTTCGAAGAGAACCTGTATGTGTTCTCCAACAACGCATCCTGGCTCGTTCCGGTGCAGTCTCCACAAAGGTATGGTTTCGCAAACGTACGCGCCGTACTCGTCGAATCGGCTGAATGCTCGTAGATCTGCGATGACGAACTCTCTGGTTCGGATCGGAGGCGTTGAAGGCGATCTCGTGAAGCGAGCCTTAGCGGCGTTGATTCGCCCTTCCTCGCATCAACTACGCCGCAGAGTCGTTGATTTCAAGCCGAGGCGTAGCCGGTTGTCGATTATGTCGAGATCTGAAGAAACATTATAG

Protein sequence

MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTLRGSSPVRFSPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFRCSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRRVVDFKPRRSRLSIMSRSEETL

Homology

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BLAST of Sed0008227 vs. NCBI nr
Match: XP_022142974.1 (uncharacterized protein LOC111012972 [Momordica charantia])

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRSLSPS RF    SSSPSAFASS+SSFSS SATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSNGSVLRSLSPSGRFYNCRSSSPSAFASSSSSFSSTSATSFFCRSTSPSRVKL 60

Query: 61  RGSSP-----VRFSPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFRCSLHKG 120
            GSSP     VRF+ + SVSVS R+    QV+QR+SSSKRTCMCSPTTHPGSFRCSLHKG
Sbjct: 61  HGSSPVSVPSVRFALHSSVSVSSRSGGNVQVVQRRSSSKRTCMCSPTTHPGSFRCSLHKG 120

Query: 121 MVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRRVVDFKP 180
           +VSQ++APYS NRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR  DFKP
Sbjct: 121 IVSQSHAPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR-ADFKP 180

Query: 181 RRSRLSIMSRSEETL 191
           + SRLSIMSR+EETL
Sbjct: 181 KHSRLSIMSRAEETL 194

[Close]

BLAST of Sed0008227 vs. NCBI nr
Match: XP_022965947.1 (uncharacterized protein LOC111465673 [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 158/201 (78.61%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRS SPS RF G+ +SSPSAFASSTSSFSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  RGSS-----PVRF------SPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFR 120
            GSS      VRF      SPNRSVSVS R++ KNQV++RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRR 180
           CSLHKG++SQ +APYS +RL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VVDFKPRRSRLSIMSRSEETL 191
             DFKP+ SRLSIMS++ ETL
Sbjct: 181 -GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Sed0008227 vs. NCBI nr
Match: KAG6586344.1 (hypothetical protein SDJN03_19077, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021190.1 hypothetical protein SDJN02_17878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-67
Identity = 159/201 (79.10%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRS S S RF G+ +SSPSAFASSTSSFSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSNGSVLRSFSSSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  RGSS-----PVRF------SPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFR 120
            GSS      VRF      SPNRSVSVS R+  KNQV++RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSGGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRR 180
           CSLHKG++SQ +APYS +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VVDFKPRRSRLSIMSRSEETL 191
             DFKPR SRLSIMS++ ETL
Sbjct: 181 -GDFKPRSSRLSIMSKAVETL 200

[Close]

BLAST of Sed0008227 vs. NCBI nr
Match: XP_022937837.1 (uncharacterized protein LOC111444107 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 157/201 (78.11%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRS SPS RF G+ +SSPSAFASSTSSFSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  RGSS-----PVRF------SPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFR 120
            GSS      VRF      SPNRSVSVS R   KNQV++RQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRR 180
           CSLHKG++SQ +APY  +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VVDFKPRRSRLSIMSRSEETL 191
             DFKP+ SRLSIMS++ ETL
Sbjct: 181 -GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Sed0008227 vs. NCBI nr
Match: XP_016902457.1 (PREDICTED: uncharacterized protein LOC103496492 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-66
Identity = 158/202 (78.22%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRS+ SVLRSLSPS RF GH +SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  RGS-----SPVRF------SPNRSVSV-SPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSF 120
            GS       VRF      SPNRSVSV SPR+   N+V+QRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRR 180
           RCSLHKG++SQ  A YS +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVVDFKPRRSRLSIMSRSEETL 191
           R VDF+P+RSRLSIMS+++ETL
Sbjct: 181 R-VDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Sed0008227 vs. ExPASy TrEMBL
Match: A0A6J1CN00 (uncharacterized protein LOC111012972 OS=Momordica charantia OX=3673 GN=LOC111012972 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.5e-69
Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRSLSPS RF    SSSPSAFASS+SSFSS SATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSNGSVLRSLSPSGRFYNCRSSSPSAFASSSSSFSSTSATSFFCRSTSPSRVKL 60

Query: 61  RGSSP-----VRFSPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFRCSLHKG 120
            GSSP     VRF+ + SVSVS R+    QV+QR+SSSKRTCMCSPTTHPGSFRCSLHKG
Sbjct: 61  HGSSPVSVPSVRFALHSSVSVSSRSGGNVQVVQRRSSSKRTCMCSPTTHPGSFRCSLHKG 120

Query: 121 MVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRRVVDFKP 180
           +VSQ++APYS NRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR  DFKP
Sbjct: 121 IVSQSHAPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR-ADFKP 180

Query: 181 RRSRLSIMSRSEETL 191
           + SRLSIMSR+EETL
Sbjct: 181 KHSRLSIMSRAEETL 194

[Close]

BLAST of Sed0008227 vs. ExPASy TrEMBL
Match: A0A6J1HLP3 (uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 158/201 (78.61%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRS SPS RF G+ +SSPSAFASSTSSFSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  RGSS-----PVRF------SPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFR 120
            GSS      VRF      SPNRSVSVS R++ KNQV++RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRR 180
           CSLHKG++SQ +APYS +RL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VVDFKPRRSRLSIMSRSEETL 191
             DFKP+ SRLSIMS++ ETL
Sbjct: 181 -GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Sed0008227 vs. ExPASy TrEMBL
Match: A0A6J1FCB9 (uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC111444107 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-67
Identity = 157/201 (78.11%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRSNGSVLRS SPS RF G+ +SSPSAFASSTSSFSS SATSFFCRSTSPSRV +
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  RGSS-----PVRF------SPNRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFR 120
            GSS      VRF      SPNRSVSVS R   KNQV++RQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRRR 180
           CSLHKG++SQ +APY  +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VVDFKPRRSRLSIMSRSEETL 191
             DFKP+ SRLSIMS++ ETL
Sbjct: 181 -GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Sed0008227 vs. ExPASy TrEMBL
Match: A0A1S4E2K6 (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 158/202 (78.22%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRS+ SVLRSLSPS RF GH +SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  RGS-----SPVRF------SPNRSVSV-SPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSF 120
            GS       VRF      SPNRSVSV SPR+   N+V+QRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRR 180
           RCSLHKG++SQ  A YS +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVVDFKPRRSRLSIMSRSEETL 191
           R VDF+P+RSRLSIMS+++ETL
Sbjct: 181 R-VDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Sed0008227 vs. ExPASy TrEMBL
Match: A0A5A7V7K3 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00990 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 157/202 (77.72%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAATSRRS+ SVLRSLSPS RF GH +SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  RGS-----SPVRF------SPNRSVSV-SPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSF 120
            GS       VRF      SPNRSVSV S R+   N+V+QRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGMVSQTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQLRR 180
           RCSLHKG++SQ  A YS +RLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ RR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVVDFKPRRSRLSIMSRSEETL 191
           R VDF+P+RSRLSIMS+++ETL
Sbjct: 181 R-VDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Sed0008227 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 155.2 bits (391), Expect = 5.2e-38
Identity = 114/217 (52.53%), Postives = 136/217 (62.67%), Query Frame = 0


Query: 1   MAATSRR--SNGSVLRSLSPSARFSGHW-----SSSPSAFASSTSSFSSRSATSFFC--- 60
           M  TS R  SNG VLRS SPS RF G +     SSS SAFASSTSS  S  +++FF    
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  ---------RSTSPSRVTLRGSSPVRFSPNRSV---SVSPRN----AVKNQVMQRQSSSK 120
                    RS SP+RV L  + P+  S   S+   S+SP N      KNQ         
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKIS 120

Query: 121 RTCMCSPTTHPGSFRCSLHKGMVS---QTYAPYSSNRLNARRSAMTNSLVRIGGVEGDLV 180
           R CMCSPTTHPGSFRCSLHK + +   Q  A Y++N LN RRSAMTNSLVRIGGVEG+ V
Sbjct: 121 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 180

Query: 181 KRALAALIRPSSHQLRRRVVDFKPRRSRLSIMSRSEE 189
           +RAL  LIRPSSH L+RR   ++PR SRLSIM++++E
Sbjct: 181 RRALTTLIRPSSHHLKRRAA-YQPRPSRLSIMAKADE 216

[Close]

BLAST of Sed0008227 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 118/223 (52.91%), Postives = 142/223 (63.68%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSLSPSARFSGHW-----SSSPSA--FASSTSSFSSRSATSFF 60
           MA TS    RSNGS  LRS SPS RF G +     SSSPS+  FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVTLRGSSPV-----------RFSPNRSVSVSPRNAVKNQVMQ 120
                      RS SP+RV L  S+P+             SPNRS++VS     K     
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVSSN---KPSNHH 120

Query: 121 RQSSSKRTCMCSPTTHPGSFRCSLHKGMVS---QTYAPYSSNRLNARRSAMTNSLVRIGG 180
           +   S+R CMCSPTTHPGSFRCSLHK + +   Q  A Y++N LN RRSAMTNSLVRIGG
Sbjct: 121 KIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGG 180

Query: 181 VEGDLVKRALAALIRPSSHQLRRRVVDFKPRRSRLSIMSRSEE 189
           VEG+ V+RAL  LIRPSSHQL+RR   ++PRRSRL+ MS++E+
Sbjct: 181 VEGEWVRRALTTLIRPSSHQLKRRSA-YEPRRSRLASMSKAED 219

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BLAST of Sed0008227 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 118/223 (52.91%), Postives = 142/223 (63.68%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSLSPSARFSGHW-----SSSPSA--FASSTSSFSSRSATSFF 60
           MA TS    RSNGS  LRS SPS RF G +     SSSPS+  FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVTLRGSSPV-----------RFSPNRSVSVSPRNAVKNQVMQ 120
                      RS SP+RV L  S+P+             SPNRS++VS     K     
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVSSN---KPSNHH 120

Query: 121 RQSSSKRTCMCSPTTHPGSFRCSLHKGMVS---QTYAPYSSNRLNARRSAMTNSLVRIGG 180
           +   S+R CMCSPTTHPGSFRCSLHK + +   Q  A Y++N LN RRSAMTNSLVRIGG
Sbjct: 121 KIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGG 180

Query: 181 VEGDLVKRALAALIRPSSHQLRRRVVDFKPRRSRLSIMSRSEE 189
           VEG+ V+RAL  LIRPSSHQL+RR   ++PRRSRL+ MS++E+
Sbjct: 181 VEGEWVRRALTTLIRPSSHQLKRRSA-YEPRRSRLASMSKAED 219

[Close]

BLAST of Sed0008227 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-11
Identity = 71/198 (35.86%), Postives = 94/198 (47.47%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSARFSGHWSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVTL 60
           MAAT  RS+ SVLR LS S R   +                         R  SPS    
Sbjct: 1   MAATG-RSSRSVLRPLSSSQRLHNNHHHHH--------------------RQRSPSPCNK 60

Query: 61  RGSSPVRFSPNRSVSVSPRNAVKNQVMQRQSS--SKRTCMCSPTTHPGSFRCSLHKGM-- 120
             +  ++F        SP +  K  V+   S+  +KR C+CSPTTHPGSFRCS H+ +  
Sbjct: 61  NLNLRLKF-------YSPGSIPKPSVVTVSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEH 120

Query: 121 -VSQTYAPYSSNR-------------LNARRSAMTNSLVRIGGVEGDLVKRALAA-LIRP 180
             S+T A  +  R             LN R+ A+ NSL +IG VE +  +R+LAA L +P
Sbjct: 121 EKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKP 169

[Close]

BLAST of Sed0008227 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 71  NRSVSVSPRNAVKNQVMQRQSSSKRTCMCSPTTHPGSFRCSLHKGMVSQ 120
           N +V V  R      + ++ S +K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 23  NSAVEVGSRG-----LSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of Sed0008227 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142974.1	1.5e-68	81.54	uncharacterized protein LOC111012972 [Momordica charantia]	[more]
XP_022965947.1	2.2e-67	78.61	uncharacterized protein LOC111465673 [Cucurbita maxima]	[more]
KAG6586344.1	2.9e-67	79.10	hypothetical protein SDJN03_19077, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937837.1	1.1e-66	78.11	uncharacterized protein LOC111444107 [Cucurbita moschata]	[more]
XP_016902457.1	5.5e-66	78.22	PREDICTED: uncharacterized protein LOC103496492 [Cucumis melo]	[more]

BLAST of Sed0008227 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0008227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN00	7.5e-69	81.54	uncharacterized protein LOC111012972 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1HLP3	1.1e-67	78.61	uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673...	[more]
A0A6J1FCB9	5.4e-67	78.11	uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]
A0A1S4E2K6	2.7e-66	78.22	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
A0A5A7V7K3	2.3e-65	77.72	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Sed0008227 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	5.2e-38	52.53	serine-rich protein-related	[more]
AT5G25280.1	1.2e-37	52.91	serine-rich protein-related	[more]
AT5G25280.2	1.2e-37	52.91	serine-rich protein-related	[more]
AT5G20370.1	7.0e-11	35.86	serine-rich protein-related	[more]
AT1G67910.1	1.7e-04	42.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..187
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008227.1	Sed0008227.1	mRNA
Sed0008227.2	Sed0008227.2	mRNA