Sed0008197 (gene) Chayote v1

Overview
NameSed0008197
Typegene
OrganismSechium edule (Chayote v1)
DescriptionF-box/WD-40 repeat-containing protein
LocationLG07: 4521797 .. 4527371 (-)
RNA-Seq ExpressionSed0008197
SyntenySed0008197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAATTGATATTTCAATCCAAAAAAAAAAACAGATGTATAACACATGGGTTTCGAACTCGTGCCCATTAGCAAGATCCATGTGGAAGTACCCACCGGTCTTCTCTTCCCAGACGTCGCCGTTTTGCTTCAATCCTTCCCCGTCCGTGAAACCGCCGGCGATGACTCCTCCACCGGCCGGCGACAGGTCATCGACGAGAAGACGGAGTGATATTCACGCAAAACCCGTTCAATCCCTAAGCCACGACATCTTGTGCATAATCTTTTCGTTCCTTGATATTTTCGATCTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGTACTCTTCTTCACCTCTAATCTCTGAACGAATACGATGAGAATTTCTCCGATGTATTTTCAGTTCCTTTTTTCTGCTAATTTGATATCTCTGACGAAATTTTGAATGTGCTCGAAGGAATTATGCTATTTATAAGACCGAAATATTGCGAACGTTTTGCTTGAGGCATCAGAAGCTGGCGATGAAGTCTGCTGGTTCTTCTGATGCATCTGAGAAGCCATTGCTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTAGGGTTGGAAGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGTAACTTTGGCAAGATGAACATTGGTGATTTCTTAAATGTTTTGTAGGAATTTATACTGGTTATGTTCATTCAACATACTTGTTATTGAGATTCTGAAATTAAGAATTTGATTGTTATGCCCCGTTTGAGAACTTTTTTTGTTTTGTTCTTTTGAAATTTAAGCCTACAAACTACTGTTACAACACATGATTTTTGTTACATAGCTTCCAAGTAATTGTTTTGGTTTATGAAATTTGGTTGGAATTCATATACTTCATTAAGAGAAGATGAAACATGGGTAGAGAATTTGAGTAAACACAGGCTTAAATTTCAAAAACCAAAAACCAAAAACTAAATGGTTATCGGACGGGGCCTTAATAATAAGATAAAATCACATCCTAAGGCCTTGCTTGATAACTATTTGGTTTTTTGGTTTTGATTGTGAAATTTAAACCTAATTTTACCCCAATTTACTATAATGTATCAATCTTTTTCTTAATAAAGTATGTAAATGCTAACCAAATTTCAAAAACAAAAACACATTTATGGAAGCTTACTTTTTTTGTTTCCAAATTTTGGTTTGGTTTATAAAAAATATAGGGAACATGTAGGCATCTAAGTAAGAAAAAAATATGATATGGTAGTTGTTGTAGACTTAAATTTCAAAAACTATAATAAAAATGGTTGTCAAACAGGATCTAATTTTGCTGTTTTGTGTTTTTCTATCAAGAATTTTACCTATAGCTTAGCCAAGGATTCTTTATTCTCGAACCTGTTCTTATATATAAATCTCTTTATTCAACATACTTGTAGTATTTTCCTTGAGTAAGCGATAGAAATACTTTGATGAGGTGTTTGCCAGTTGTTTTGTAGCGTTATCTTTTTTATGAATCCACGCATAAATGGAAAAATATTTTTGAAATTCTCTTGAACATTTTGCATCACTGTGCAGATTTTCTTTCCTCTTTGAATGTTTGCATAATAACTCCTGTAACGTGGATTTCTATATAGGGCTGAACAATGCCGAATGAAGATGGGCTTGATTCTTACAGGAGTGGGTGATAAAGTATAGCCTCATACTCTACTGCTTGAAAGAAATTAGGTTTGGCTTATGTATTTGTCCTTTCCTCAAACATAAAAAGGGCAGATGAATAAATAAACAAATGCCACCTATGGTGAATCAATTTCATACAAGTTTCCTTGACAATCAAATGTTGTCGGGTAGGGTTAGGTATTTGTCTCGCAAGAATAATTGACGTACACACAAGTTGGTCTGAACACTCACAAAAATTAAAAAGAAAATATATAAACAAATGTTTGAGTGTGAAGTGTAAGAGAGAGAGCCATGTATTTTTATTTAACTACTAGATTCAAGTGTGTGCGTGGGAGATAGAGATGTAATTACTTTGAGAAATTTTAATATTGCTTGTTGCCACTCCTGTCTCTTGGTTTTACTCAAAGATTTTCGGGCAATTCCAGGTTATGAGACTTTGGTCCTCTGAGAACTTCAGATGTTTGGAAGAATATGCCATTCCGGAGAAACTACCTCTAATTGACTTTGATTTTGATGAGAGCAAGGTAATATCCATGTATCTCTTATAGTTCTAAGTATGCTGATGTTCTTGCTACTCGAACAGAAAACTTTTGACACAGCATGCTATACTATACAAAAGGCGAATAATTTTCTAAAAAAAATATATCTTCGATGCATCCATTCCTTTTTATCTTTTTGATCTTAAGCCACTTGGGACTTTTCTGGTTGGAATTCTGAACTTTATTCTCTCCCAATTGGAGAACTGATATTCGCCAAATGGAATCTAATTTCTCAAACCATTGTCCTAGATTGTAGGTTTGGTTGGTAGAAATATGTGCATATGGAGTCGGAGTGGGAAAAGAAGTATATTTCCTTCACGTGAATGTACATTTGTGGAGGGTTCGTGTATGCGGTTAGTGGCTTTCACCTAACTATGTTAAAAGCATTTAAGTTCCACCGAAGTACTGTTGGCATGTGCTGTTGCAACAATTATGAACGTGCATAAAATTTTAAATGTGAGACAAGTTGAGATCTTTCGTAAGTTTATTTCTTTCTTTCCTGAAATAAATTTAAATAGTTTACTAGTGAGCAATGCAATTAGAAAGAGTAGAATAGGATGGGTCCCTATCTGGAAAACAAAACCAAGGCAATTTAAAAAATTCTTTGCCACCTAAGAGTAGAGGCTTAAGAAATACTAACAGAAAGTTCTATTTGTTTTAAGAAAACTAACTTGTTTAACATCAATGTCTTTTTAGCCACCTTTTAATCATTTTAAATTTAAAAGGTTAAATTATTCCTTTCGTCCATATATTTTCATACTTGTATCGACTTTGTCATGTAATTTAACTTATCAATCGCAATACTCTTCCTCTGGTGCACCAGTTTCAGTTTATGTTTATAATATGAAAGAATGATTATAACTGCAGCCTTTGTGCAATAATTTGTAGACTTAAAGTGATTATTCTCATTAATTTTCAATGAATTTGTATGATGAATCTTCCAATCCTGCTTACAGCTACTTTGATTCGGAGGCTGTTGTCGGTTGTGAAGATGGAACAGCTCATGTGTTCGACATGTATAGCAGGAGATGCTCTAGAATTATCAGGTAAACCGGGAGGCTATAATCAGACCTTTTAGGAAATGACCGAACAGATGAGGAGTAACCGTTAGAAGTTGAATTGGTGAAAATACCGTCACATGAGTTTGATATTCATTACTTCTTTCACTTTGCACACAAATGCCCATGCTGACATTTTTACATTAGAATAAAAATAGAGGTTTTATATGAATCAAAGGTTAATGGAAAACTAATTTTCAGCATTTCTTATTGCTTCCTTGGTTTTATGTGAATTTCCTAAATGGTTGACATGCCATCCAATTCTAAATCGACTTTTACACTAATTTTGTTAACATTTTATTGCAGGATGCTTCCAGGGCCAGTGACATGCTTATGTGTGGATGATGATCAGCTCATACTTGGCGGTTCTCTTCTTGGAAACATTGGAGTATCAGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATATAGTAGGTTATATTTGATGCCTTCATTTGAGTTTAAATGCATATGACAGTTATTCTTGCACGTTACTCCTTCTCCTTTTCTCCTTTTAAACTTTCTGTCTCATGGTTCGAAAAAAAAAAACGTTCTGTCTCAAACTTACTGAATCAAATATAACACTAGAAATAGATATCTGAATTAGAGACAAAATGGAAGCATGTCATGCAGGGTAGTTTAACATCCGAAGTAAACAATGTCCGAAGTAGTTTTCCTATAGCTAATCCTAACTTCCTTTTCAAGGCACTATAAAAAATTTTGTTCCAACCGGAGAACGTTTATAGATTTCCTTCTGTGGTTAGTTCCCTTCATGTTATCTGCAGGATTGTTTTTGTAATAGATTTCTACATTGATCGAAAAGTATTTCTTTTCCACTTGTATTAAATTGAATGTAGTGTTTATTCTTTTTTTAGAGAACTTAAATGCAGTGTTTATTTTATTACAATTTCTGCTTGCAGGCATAAAGACTACGTGTTACAACGCTTCTTCACATTTAGTATTTGCAGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGTAAGTCAAAAGAACTTTAGATGCAATTTTAGCTTGCTGCTTGAATAATTAATGGAGATGGAAAACAATTTCCTACTGTGAACTTTACAAACTACGTTTAATTGTTAATGTTATAGGCTAACTTAATGTTGAGTGAGACAAATCTCATGATAGTCACAAACCTAGGATTTCAAAATCCTTCAAGTCCCTTGGTTTCCAAATATAAGGTCAACACCGTTGTCGAAAAGTGTATACATTGGTATGGGTTCTCATGGTATCGAACAAAGATAAGAAGTTAATGCGAGATAGCTTCAGGCCAAGAAATGAAAAACTTTAACCAATGTTGAATTTCCGTTGCTGTTTGTATAGTGAAACAAAATGAAATTATTGTTCTAAAATTGGGTTCGGGAATTCAAGAGGTTCCTACTTTAGCTGATAATTATATCCTTCAACCCATAAAAGTATATATATAAGTATATATGTGGTTCAATCCAGGTGGCCATCTACTTAGAAGTGGATTTTCTTTAAATTTTTTTGACATTTAAATGTTGTCGGATCAAATAGTTTGTCCCGTGAAATTAATCAAAGTACGCGTAATCTAGCCAAGACATTTGTTACAAAGGAAAGGGAGATTCTGATGCCACATTTATTTCTTGTGTCCACGATGTTCTAATTTCAGACCATGTTGTTTATTGAGTTTCTATACTCATTTTTTTCAAAGTTTATACTAATCAAGGTTTGCACATTTCTTAGGACAATGAAATCTTTATGGGAAACGCGAGTGAGCCCAAACGTCATATATTCTTTGCAACATCTACAAAATGACAGGTCGAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGCTGTATCATGGATAGTAGACTGTTATCGACATGTAGGAACGGTCTCGGAGTAGTCGAAGAAAGAAGAGGAAAAAGACTGTCAGATGAGACTGCTATTGATTCCATAAACAGAAGGAATAGGCCTCCAATTACAAGCTTGGCCGTTGGGATGAATAAAATAGTCACAGCGCATAACGATAAGTTCATTGGATTATGGAAGTTTAGAAACTAATTTTGTTTCTAGCTGAATTCTTGGTTGTTTGTTGTATTTCCTTAAATTTTATTGATGATTTTTCTGATGAGCAACGCAGAATTATGATGGATTCTAGATAGAACTTTTGTTTTCAAGTGAAAATATCAGTTTCTTTTAACATCCGACATCAAAGATTGCATTTGAGTTATCATTCAGCTATATATCACACCCTTCAAC

mRNA sequence

GAAAAATTGATATTTCAATCCAAAAAAAAAAACAGATGTATAACACATGGGTTTCGAACTCGTGCCCATTAGCAAGATCCATGTGGAAGTACCCACCGGTCTTCTCTTCCCAGACGTCGCCGTTTTGCTTCAATCCTTCCCCGTCCGTGAAACCGCCGGCGATGACTCCTCCACCGGCCGGCGACAGGTCATCGACGAGAAGACGGAGTGATATTCACGCAAAACCCGTTCAATCCCTAAGCCACGACATCTTGTGCATAATCTTTTCGTTCCTTGATATTTTCGATCTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGAATTATGCTATTTATAAGACCGAAATATTGCGAACGTTTTGCTTGAGGCATCAGAAGCTGGCGATGAAGTCTGCTGGTTCTTCTGATGCATCTGAGAAGCCATTGCTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTAGGGTTGGAAGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGGCTGAACAATGCCGAATGAAGATGGGCTTGATTCTTACAGGAGTGGGTGATAAAGTTATGAGACTTTGGTCCTCTGAGAACTTCAGATGTTTGGAAGAATATGCCATTCCGGAGAAACTACCTCTAATTGACTTTGATTTTGATGAGAGCAAGATTGTAGGTTTGGTTGGTAGAAATATGTGCATATGGAGTCGGAGTGGGAAAAGAAGTATATTTCCTTCACGTGAATGTACATTTGTGGAGGGTTCGTGTATGCGCTACTTTGATTCGGAGGCTGTTGTCGGTTGTGAAGATGGAACAGCTCATGTGTTCGACATGTATAGCAGGAGATGCTCTAGAATTATCAGGATGCTTCCAGGGCCAGTGACATGCTTATGTGTGGATGATGATCAGCTCATACTTGGCGGTTCTCTTCTTGGAAACATTGGAGTATCAGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATATAGTAGGCATAAAGACTACGTGTTACAACGCTTCTTCACATTTAGTATTTGCAGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGACAATGAAATCTTTATGGGAAACGCGAGTGAGCCCAAACGTCATATATTCTTTGCAACATCTACAAAATGACAGGTCGAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGCTGTATCATGGATAGTAGACTGTTATCGACATGTAGGAACGGTCTCGGAGTAGTCGAAGAAAGAAGAGGAAAAAGACTGTCAGATGAGACTGCTATTGATTCCATAAACAGAAGGAATAGGCCTCCAATTACAAGCTTGGCCGTTGGGATGAATAAAATAGTCACAGCGCATAACGATAAGTTCATTGGATTATGGAAGTTTAGAAACTAATTTTGTTTCTAGCTGAATTCTTGGTTGTTTGTTGTATTTCCTTAAATTTTATTGATGATTTTTCTGATGAGCAACGCAGAATTATGATGGATTCTAGATAGAACTTTTGTTTTCAAGTGAAAATATCAGTTTCTTTTAACATCCGACATCAAAGATTGCATTTGAGTTATCATTCAGCTATATATCACACCCTTCAAC

Coding sequence (CDS)

ATGTATAACACATGGGTTTCGAACTCGTGCCCATTAGCAAGATCCATGTGGAAGTACCCACCGGTCTTCTCTTCCCAGACGTCGCCGTTTTGCTTCAATCCTTCCCCGTCCGTGAAACCGCCGGCGATGACTCCTCCACCGGCCGGCGACAGGTCATCGACGAGAAGACGGAGTGATATTCACGCAAAACCCGTTCAATCCCTAAGCCACGACATCTTGTGCATAATCTTTTCGTTCCTTGATATTTTCGATCTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGAATTATGCTATTTATAAGACCGAAATATTGCGAACGTTTTGCTTGAGGCATCAGAAGCTGGCGATGAAGTCTGCTGGTTCTTCTGATGCATCTGAGAAGCCATTGCTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTAGGGTTGGAAGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGGCTGAACAATGCCGAATGAAGATGGGCTTGATTCTTACAGGAGTGGGTGATAAAGTTATGAGACTTTGGTCCTCTGAGAACTTCAGATGTTTGGAAGAATATGCCATTCCGGAGAAACTACCTCTAATTGACTTTGATTTTGATGAGAGCAAGATTGTAGGTTTGGTTGGTAGAAATATGTGCATATGGAGTCGGAGTGGGAAAAGAAGTATATTTCCTTCACGTGAATGTACATTTGTGGAGGGTTCGTGTATGCGCTACTTTGATTCGGAGGCTGTTGTCGGTTGTGAAGATGGAACAGCTCATGTGTTCGACATGTATAGCAGGAGATGCTCTAGAATTATCAGGATGCTTCCAGGGCCAGTGACATGCTTATGTGTGGATGATGATCAGCTCATACTTGGCGGTTCTCTTCTTGGAAACATTGGAGTATCAGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTTAGATCAAGAAATATAGTAGGCATAAAGACTACGTGTTACAACGCTTCTTCACATTTAGTATTTGCAGGATCAACTGCCGGACATGTCTATTGTTGGGACCTCAGGACAATGAAATCTTTATGGGAAACGCGAGTGAGCCCAAACGTCATATATTCTTTGCAACATCTACAAAATGACAGGTCGAGTTTGGCTGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGCTGTATCATGGATAGTAGACTGTTATCGACATGTAGGAACGGTCTCGGAGTAGTCGAAGAAAGAAGAGGAAAAAGACTGTCAGATGAGACTGCTATTGATTCCATAAACAGAAGGAATAGGCCTCCAATTACAAGCTTGGCCGTTGGGATGAATAAAATAGTCACAGCGCATAACGATAAGTTCATTGGATTATGGAAGTTTAGAAACTAA

Protein sequence

MYNTWVSNSCPLARSMWKYPPVFSSQTSPFCFNPSPSVKPPAMTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKTEILRTFCLRHQKLAMKSAGSSDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGHSVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVGRNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVFAGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTAHNDKFIGLWKFRN
Homology
[Close]
BLAST of Sed0008197 vs. NCBI nr
Match: XP_023513731.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.4 bits (2001), Expect = 2.8e-220
Identity = 379/433 (87.53%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS RRRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQWIGH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEGRIRVSQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RN+CIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNLCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CIMDSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIMDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. NCBI nr
Match: XP_023004546.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita maxima])

HSP 1 Score: 775.0 bits (2000), Expect = 3.7e-220
Identity = 379/433 (87.53%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS +RRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSAKRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQWIGH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFKVSVSSEKPLLECLEEIAMERHKLALEEGRIRVSQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CIMDSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIMDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. NCBI nr
Match: XP_022960484.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita moschata])

HSP 1 Score: 774.2 bits (1998), Expect = 6.3e-220
Identity = 378/433 (87.30%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS RRRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQW+GH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEGRIRVSQWMGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RN+CIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNLCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CIMDSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIMDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. NCBI nr
Match: KAG6593280.1 (F-box/WD-40 repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 772.7 bits (1994), Expect = 1.8e-219
Identity = 377/433 (87.07%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS RRRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQW+GH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEGRIRVSQWMGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RN+CIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNLCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CI+DSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIVDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. NCBI nr
Match: XP_038899781.1 (F-box/WD-40 repeat-containing protein At3g52030 [Benincasa hispida])

HSP 1 Score: 771.9 bits (1992), Expect = 3.1e-219
Identity = 376/433 (86.84%), Postives = 399/433 (92.15%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           MTPPPA +RSSTRRRSDI AKPV SLS+DILCIIFSFLD+FDLVRCSVVCKSWNYAIYK+
Sbjct: 1   MTPPPAAERSSTRRRSDIDAKPVHSLSYDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60

Query: 103 EILRTFCLRHQKLAMKSAGSSDAS---EKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           EILRTFC R+QK  M +A +S+ S   EKPLLECLEEIAMERHKL L+EGRIRVSQWIGH
Sbjct: 61  EILRTFCSRYQKQEMNTASTSEVSFSLEKPLLECLEEIAMERHKLALKEGRIRVSQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWS E FRCLEEY+IPEK+PL+DFDFD  KIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSPEKFRCLEEYSIPEKVPLVDFDFDMGKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           R +CIWSRSG RSIFPSRECTFV+G CMRYFD+EAVVGCEDGTAHVFDMYSRRCSRIIRM
Sbjct: 181 RQLCIWSRSGNRSIFPSRECTFVKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSLLGNIGVSGLRSDQRVAMLRSRN VGI++ CYN SSHLVF
Sbjct: 241 LPGPVTCLCVSDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNTVGIRSLCYNDSSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLR MKSLWE+RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRMMKSLWESRVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRSCCIMDSRLLST +N LG VEER GKRLSDET ID+INRRNRP ITSLAVGMNKI T 
Sbjct: 361 VRSCCIMDSRLLSTHQNSLGTVEERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIATT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKF++
Sbjct: 421 HNDKFIRLWKFQS 433

[Close]
BLAST of Sed0008197 vs. ExPASy Swiss-Prot
Match: Q9SV01 (F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 GN=At3g52030 PE=4 SV=2)

HSP 1 Score: 461.8 bits (1187), Expect = 9.0e-129
Identity = 233/445 (52.36%), Postives = 298/445 (66.97%), Query Frame = 0 

Query: 49  GDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKTEILRTF 108
           GD SS R+        ++SL  DILCIIFSFLD+FDLV C+VVC SWN  I + ++L+  
Sbjct: 7   GDESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQAS 66

Query: 109 CLRHQKLAMKSAGSSDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGHSVRAEQCRM 168
           C +   L   S  SS + ++P    +E+ AM+ HK+ L  GRI + +W  HS R  QCRM
Sbjct: 67  CRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRM 126

Query: 169 KMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESK--------------- 228
           K GL+LTGVGDKVMRLWS ++++C+EEY++P+   LIDFDFDESK               
Sbjct: 127 KKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKKLEVVSLAWEYFDSV 186

Query: 229 ------IVGLVGRNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFD 288
                 IVGLVG  + IW R+G+RSIFPSR  TF +G CMRY D EAVVGCEDGTA VFD
Sbjct: 187 VVVVVEIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFD 246

Query: 289 MYSRRCSRIIRMLPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSR-NIVGI 348
           MYS+ CS+IIR   GP+TCL + D+QL L GS LG + VS    DQ VA L+S     GI
Sbjct: 247 MYSKTCSQIIRTQGGPITCLSLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGI 306

Query: 349 KTTCYNASSHLVFAGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGI 408
           +T C+N  ++L F G+T G+V CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGI
Sbjct: 307 QTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGI 366

Query: 409 DGILRILDQNTGTVRSCCIMDSRLLST-CRNGLGVVEERRGKRLSDETAIDSINRRNRPP 468
           DG+LR++DQ +G V S  IMD +  +T  RN   V+E+RRGKR+S +  ID I R+ RP 
Sbjct: 367 DGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNNQVVIEKRRGKRVSQDMEIDKIERKVRPQ 426

Query: 469 ITSLAVGMNKIVTAHNDKFIGLWKF 471
           I+ +A+GM K+VTAHN K I +WKF
Sbjct: 427 ISCIAMGMKKMVTAHNGKCISVWKF 451

[Close]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match: A0A6J1KSE3 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497818 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.8e-220
Identity = 379/433 (87.53%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS +RRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSAKRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQWIGH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFKVSVSSEKPLLECLEEIAMERHKLALEEGRIRVSQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CIMDSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIMDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match: A0A6J1HB56 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461209 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 3.0e-220
Identity = 378/433 (87.30%), Postives = 402/433 (92.84%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PP   DRSS RRRS+I AKPV SLSHDILCIIFSFLD+FDLVRCSVVCKSWN AI+ +
Sbjct: 1   MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 103 EILRTFCLRHQKLAMKSAGS---SDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           E+LRTFC++HQK  M+S+ S   S +SEKPLLECLEEIAMERHKL LEEGRIRVSQW+GH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEGRIRVSQWMGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEY+IPEKLPLIDFDFDESKIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYSIPEKLPLIDFDFDESKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           RN+CIWSRSGKRSIFPSRECTFVEGSCMRYFD EAVVGC DGTAHVFDMYSRRCSRI+RM
Sbjct: 181 RNLCIWSRSGKRSIFPSRECTFVEGSCMRYFDPEAVVGCGDGTAHVFDMYSRRCSRIVRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV DDQLILGGSL GNIGVSGLRSDQRVAMLRSRN +GIKT CYNASSHLVF
Sbjct: 241 LPGPVTCLCVGDDQLILGGSLHGNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMK LWE+RVSPNV+YSL+HLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKPLWESRVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRS CIMDSRLLST ++G+GVVEER G RLSDET ID+I+RR+RPPITSLAVGMNKIVT 
Sbjct: 361 VRSGCIMDSRLLSTYQSGVGVVEERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKFRN
Sbjct: 421 HNDKFIRLWKFRN 433

[Close]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match: A0A0A0KBD6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420840 PE=4 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 4.4e-219
Identity = 371/433 (85.68%), Postives = 400/433 (92.38%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           MTPPP  DRSS RRRSD+ AKPV SLSHDILCIIFSFLD+FDLVRC  VCKSWNYAIYK+
Sbjct: 1   MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLGVCKSWNYAIYKS 60

Query: 103 EILRTFCLRHQKLAMKSAGSSDAS---EKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           EILRTFCLR+QK  M SA +S+ S   EKPLLECLEEIAMERHKL LE+GRIRVSQWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVR EQCRMKMGLILTGVGDKVMRLWS ENFRCLEEY++PEK+PL+DFDFD  KIVGL+G
Sbjct: 121 SVRVEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSVPEKMPLVDFDFDVGKIVGLIG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           R +CIWSRSGKRSIFPSRECTF +G CMRYFD+EAVVGCEDGTAHVFDMYSRRCSRIIRM
Sbjct: 181 RQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV+DDQL+ GGSLLGNIGVSG+RSDQRV MLRSRN VGI+T CYNASS LVF
Sbjct: 241 LPGPVTCLCVNDDQLMFGGSLLGNIGVSGVRSDQRVVMLRSRNTVGIRTLCYNASSRLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMKSLWE+RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           V+SCC+MDSRLLST ++GLG+VEERRGKRLSDET ID+I+RRNRP ITSLAVGMNKIVT 
Sbjct: 361 VQSCCMMDSRLLSTHQDGLGIVEERRGKRLSDETPIDTIDRRNRPSITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKF++
Sbjct: 421 HNDKFIKLWKFQS 433

[Close]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match: A0A5D3CFV2 (F-box/WD-40 repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00270 PE=4 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.4e-217
Identity = 373/433 (86.14%), Postives = 396/433 (91.45%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           MTPPP  DRSS RRRSD+ AKPV SLSHDILCIIFSFLD+FDLVRC  VCKSWNYAIYK+
Sbjct: 1   MTPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 103 EILRTFCLRHQKLAMKSAGSSDAS---EKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           EILRTFCLR+QK  M SA +S  S   EKPLL+CLEEIAMERHKL LE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWS ENFRCLEEY+IPEK+PLIDFDFD  KIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKVPLIDFDFDVGKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           + +CIWSRSGKRSIFPSRECTF +G CMRYFD+EAVVGCEDGTAHVFDMYSRRCSRIIRM
Sbjct: 181 KQLCIWSRSGKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV+DDQL+ GGSLLGNIGVSGLRSDQRV MLRSRN VGI+T C N SS LVF
Sbjct: 241 LPGPVTCLCVNDDQLMFGGSLLGNIGVSGLRSDQRVVMLRSRNTVGIRTLCCNDSSRLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMKSLWE+RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRSCC+MDSRLLST +NGLG VEERRGKRLSDET ID+I+RRNRP ITSLAVGMNKIVT 
Sbjct: 361 VRSCCMMDSRLLSTHQNGLGTVEERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKF++
Sbjct: 421 HNDKFIRLWKFQS 433

[Close]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match: A0A1S3CEH9 (F-box/WD-40 repeat-containing protein At3g52030 OS=Cucumis melo OX=3656 GN=LOC103499956 PE=4 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.4e-217
Identity = 372/433 (85.91%), Postives = 395/433 (91.22%), Query Frame = 0 

Query: 43  MTPPPAGDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKT 102
           M PPP  DRSS RRRSD+ AKPV SLSHDILCIIFSFLD+FDLVRC  VCKSWNYAIYK+
Sbjct: 1   MAPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 103 EILRTFCLRHQKLAMKSAGSSDAS---EKPLLECLEEIAMERHKLGLEEGRIRVSQWIGH 162
           EILRTFCLR+QK  M SA +S  S   EKPLL+CLEEIAMERHKL LE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 163 SVRAEQCRMKMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVG 222
           SVRAEQCRMKMGLILTGVGDKVMRLWS ENFRCLEEY+IPEK+PLIDFDFD  KIVGLVG
Sbjct: 121 SVRAEQCRMKMGLILTGVGDKVMRLWSPENFRCLEEYSIPEKVPLIDFDFDVGKIVGLVG 180

Query: 223 RNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRM 282
           + +CIWSRSGKRSIFPSRECTF +G CMRY D+EAVVGCEDGTAHVFDMYSRRCSRIIRM
Sbjct: 181 KQLCIWSRSGKRSIFPSRECTFEKGLCMRYLDAEAVVGCEDGTAHVFDMYSRRCSRIIRM 240

Query: 283 LPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNIVGIKTTCYNASSHLVF 342
           LPGPVTCLCV+DDQL+ GGSLLGNIGVSGLRSDQRV MLRSRN VGI+T CYN SS LVF
Sbjct: 241 LPGPVTCLCVNDDQLMFGGSLLGNIGVSGLRSDQRVVMLRSRNTVGIRTLCYNDSSRLVF 300

Query: 343 AGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 402
           AGSTAGHVYCWDLRTMKSLWE+RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT
Sbjct: 301 AGSTAGHVYCWDLRTMKSLWESRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGT 360

Query: 403 VRSCCIMDSRLLSTCRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTA 462
           VRSCC+MDSRLLST +NGLG VEERRGKRLSDET ID+I+RRNRP ITSLAVGMNKIVT 
Sbjct: 361 VRSCCMMDSRLLSTHQNGLGTVEERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTT 420

Query: 463 HNDKFIGLWKFRN 473
           HNDKFI LWKF++
Sbjct: 421 HNDKFIRLWKFQS 433

[Close]
BLAST of Sed0008197 vs. TAIR 10
Match: AT3G52030.2 (F-box family protein with WD40/YVTN repeat doamin )

HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-133
Identity = 233/424 (54.95%), Postives = 298/424 (70.28%), Query Frame = 0 

Query: 49  GDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKTEILRTF 108
           GD SS R+        ++SL  DILCIIFSFLD+FDLV C+VVC SWN  I + ++L+  
Sbjct: 7   GDESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQAS 66

Query: 109 CLRHQKLAMKSAGSSDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGHSVRAEQCRM 168
           C +   L   S  SS + ++P    +E+ AM+ HK+ L  GRI + +W  HS R  QCRM
Sbjct: 67  CRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRM 126

Query: 169 KMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESKIVGLVGRNMCIWSRS 228
           K GL+LTGVGDKVMRLWS ++++C+EEY++P+   LIDFDFDESKIVGLVG  + IW R+
Sbjct: 127 KKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKIVGLVGTRISIWRRN 186

Query: 229 GKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLC 288
           G+RSIFPSR  TF +G CMRY D EAVVGCEDGTA VFDMYS+ CS+IIR   GP+TCL 
Sbjct: 187 GQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCLS 246

Query: 289 VDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSR-NIVGIKTTCYNASSHLVFAGSTAGHV 348
           + D+QL L GS LG + VS    DQ VA L+S     GI+T C+N  ++L F G+T G+V
Sbjct: 247 LSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGYV 306

Query: 349 YCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMD 408
            CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGIDG+LR++DQ +G V S  IMD
Sbjct: 307 SCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIMD 366

Query: 409 SRLLST-CRNGLGVVEERRGKRLSDETAIDSINRRNRPPITSLAVGMNKIVTAHNDKFIG 468
            +  +T  RN   V+E+RRGKR+S +  ID I R+ RP I+ +A+GM K+VTAHN K I 
Sbjct: 367 DKFSTTSTRNNQVVIEKRRGKRVSQDMEIDKIERKVRPQISCIAMGMKKMVTAHNGKCIS 426

Query: 469 LWKF 471
           +WKF
Sbjct: 427 VWKF 430

[Close]
BLAST of Sed0008197 vs. TAIR 10
Match: AT3G52030.1 (F-box family protein with WD40/YVTN repeat doamin )

HSP 1 Score: 461.8 bits (1187), Expect = 6.4e-130
Identity = 233/445 (52.36%), Postives = 298/445 (66.97%), Query Frame = 0 

Query: 49  GDRSSTRRRSDIHAKPVQSLSHDILCIIFSFLDIFDLVRCSVVCKSWNYAIYKTEILRTF 108
           GD SS R+        ++SL  DILCIIFSFLD+FDLV C+VVC SWN  I + ++L+  
Sbjct: 7   GDESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQAS 66

Query: 109 CLRHQKLAMKSAGSSDASEKPLLECLEEIAMERHKLGLEEGRIRVSQWIGHSVRAEQCRM 168
           C +   L   S  SS + ++P    +E+ AM+ HK+ L  GRI + +W  HS R  QCRM
Sbjct: 67  CRKMHHLGSDSPSSSTSLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHRVSQCRM 126

Query: 169 KMGLILTGVGDKVMRLWSSENFRCLEEYAIPEKLPLIDFDFDESK--------------- 228
           K GL+LTGVGDKVMRLWS ++++C+EEY++P+   LIDFDFDESK               
Sbjct: 127 KKGLLLTGVGDKVMRLWSLKSYKCMEEYSLPDASSLIDFDFDESKKLEVVSLAWEYFDSV 186

Query: 229 ------IVGLVGRNMCIWSRSGKRSIFPSRECTFVEGSCMRYFDSEAVVGCEDGTAHVFD 288
                 IVGLVG  + IW R+G+RSIFPSR  TF +G CMRY D EAVVGCEDGTA VFD
Sbjct: 187 VVVVVEIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMRYIDPEAVVGCEDGTARVFD 246

Query: 289 MYSRRCSRIIRMLPGPVTCLCVDDDQLILGGSLLGNIGVSGLRSDQRVAMLRSR-NIVGI 348
           MYS+ CS+IIR   GP+TCL + D+QL L GS LG + VS    DQ VA L+S     GI
Sbjct: 247 MYSKTCSQIIRTQGGPITCLSLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGI 306

Query: 349 KTTCYNASSHLVFAGSTAGHVYCWDLRTMKSLWETRVSPNVIYSLQHLQNDRSSLAVGGI 408
           +T C+N  ++L F G+T G+V CWDLR M  LWE RVSPNV+YS+Q L+ND S +  GGI
Sbjct: 307 QTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGI 366

Query: 409 DGILRILDQNTGTVRSCCIMDSRLLST-CRNGLGVVEERRGKRLSDETAIDSINRRNRPP 468
           DG+LR++DQ +G V S  IMD +  +T  RN   V+E+RRGKR+S +  ID I R+ RP 
Sbjct: 367 DGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNNQVVIEKRRGKRVSQDMEIDKIERKVRPQ 426

Query: 469 ITSLAVGMNKIVTAHNDKFIGLWKF 471
           I+ +A+GM K+VTAHN K I +WKF
Sbjct: 427 ISCIAMGMKKMVTAHNGKCISVWKF 451

The following BLAST results are available for this feature:
BLAST of Sed0008197 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513731.12.8e-22087.53F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita pepo subsp... [more]
XP_023004546.13.7e-22087.53F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita maxima][more]
XP_022960484.16.3e-22087.30F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucurbita moschata][more]
KAG6593280.11.8e-21987.07F-box/WD-40 repeat-containing protein, partial [Cucurbita argyrosperma subsp. so... [more]
XP_038899781.13.1e-21986.84F-box/WD-40 repeat-containing protein At3g52030 [Benincasa hispida][more]
BLAST of Sed0008197 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SV019.0e-12952.36F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Sed0008197 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KSE31.8e-22087.53F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1HB563.0e-22087.30F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita moschata... [more]
A0A0A0KBD64.4e-21985.68F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420840 PE=4 ... [more]
A0A5D3CFV21.4e-21786.14F-box/WD-40 repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3CEH92.4e-21785.91F-box/WD-40 repeat-containing protein At3g52030 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Sed0008197 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G52030.21.2e-13354.95F-box family protein with WD40/YVTN repeat doamin [more]
AT3G52030.16.4e-13052.36F-box family protein with WD40/YVTN repeat doamin [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 68..108
e-value: 1.9E-7
score: 40.8
IPR001810F-box domainPFAMPF00646F-boxcoord: 66..109
e-value: 1.7E-8
score: 34.1
IPR001810F-box domainPROSITEPS50181FBOXcoord: 62..108
score: 9.285514
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 163..322
e-value: 1.4E-11
score: 46.0
NoneNo IPR availableGENE3D1.20.1280.50coord: 52..162
e-value: 1.6E-12
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..60
NoneNo IPR availablePANTHERPTHR22847:SF668F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 46..324
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 46..324
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 156..318
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 64..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008197.1Sed0008197.1mRNA
Sed0008197.2Sed0008197.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051568 histone H3-K4 methylation
cellular_component GO:0048188 Set1C/COMPASS complex
molecular_function GO:0042393 histone binding
molecular_function GO:0005515 protein binding