Sed0008185 (gene) Chayote v1

Overview


Name	Sed0008185
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear factor related to kappa-B-binding protein
Location	LG05: 40097105 .. 40099309 (+)
RNA-Seq Expression	Sed0008185
Synteny	Sed0008185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAATGGAAGAGAGAGTGAGTCACTGGTGGCTGACTCGGAATGGCAAATGGCGAGTTGACTCAGTGGTCTGTGGTGTCTGTGTTGGGTTCCAGTTCCGCTCACAGTTTCTCTCTCTTCTGCCCTTTTTCGTCTTTTCCCACTCTTCTTCTTCCTTGCAATCCGACGCTCCATTTCCATCCACGTCATCATCGTCTTCTTCAATCTTCCTCTTCTTCTCCTTAAACCAATCTCTGGCTAGGGTTTCTATTTCCTTTCCTTAATGTTTTCGCGATTTCTCTTCTGGGTTTTACTTTTCGTGCATTGCGATTTCCGCTACGTTCTCTACAAGTTCATCCAATCGAGAATGAGGTATTTCTTGTTCTTGCTTTGATTTTGACGAATTCGATTTTTTCTCTTTCGAGCGTTTTAATTGTTTGATTTTTGTTTTGCTTTGTATGAATGTAGGGTTTAGGTCGACTTGGTTATGTTCCGGTTTTGGAGTTGTTGGAATTTGATAGTCGGAGGGGTTAAATTCGGTTTTTTGTTAATTTTGTGGTTGATTTGGGGTTTTCATGTTTCAATATCAATATCGCTATTGAGAAGAACAATTTTAAGGTTTCGAGGTTTGATTATGAGTTTTCACCTGGGAGTACTAAGAGCAGCATTTCCAGTAATGATGAAGATGAGCTCCAAAGACATGCCTCTGCTGATGATGATGATGAACAGTTTGCTGATGCAGATTCTGGGGCGGGGTCCGATGATTATGATACCCTCGAATGGGGAGAGTGGAGTTTTGCCACCTTGATAATCAGACTTGTAGTATTCCTCTTGAGCTGTATGATCTTTCGGGTTTCGAAGATATATTGTCTGTTGATGTGTGGAATGGCTGCCTAACTGAACAGGACCGATTTAGCCTCTCTAGATATGGACCAAGAGATATATATGCTTACACTCAAAGAGCTTTTTACCGTTAGCAACTTCCATTTTGGAAGCCCAATAAAGATGTTGTTTAGCATGCTGAAGGGGGGTTTATGTGAGCCCAGAGTTGCCCTTTATCGTCATGGTCTCAACTTTTTTCAATGGCGGCAACACTATCATCTTCTGAGGAAGCATCAGAACAATATGGTTAGCAACCTATGTCAGATGAGAGATGCTTGGCTTAACTGTAGAGGATACAGCATGGAAGAGAGGCTTCGTGTCTTAAATCTTATGAGGAGTCAAAAAAGTTTCAACGATGAGATGGTCAATGGTTTAGAAACTGATACGTCGGATAGAGTTTCAGGTGAAGAATTTCATAGAAGGTTTAAGGACAAGAAAACTGCTGCCAAAATGCCCAACTTTTCTACATATATGTTGTGGAAGATGTATCTGATACACAAGTTAATCAAGTTGTAACTGGTGCATTGGACAGATTGCATTATGAACGTGATCCTTGTGTCCAATTTGATGGTGAAAGAAAACTGTGGGTTTATTTGCATATAGAACGCGAAGAAGAAGATTTCAGAGGACGATGGTACTTCATCTACTAAGAAATGGAAGAGGCCTAAAAAAGATGCTGTTGAGCAATCATCTAATCTTGGACTTGTGACAGTAGCTTACCATGCATCTGGAGAACATACTAGATATGACGTTTGCTCTGATCTTAACACAGAACCCCCACGTGATGATGATGATGTTAAAGGAATGGAACCAATTTATGGTGATGTGAGGCAAAATCTGGAGCATGGCATAGATAACAATCATGGGTCTGATCATGATGAGATTTCTCAAGTTCCACAGGTTATCGAAGTTTCTAATCCTATGGAAGAGACCAAGTTGATATGACAAGAAAATTCCACTAATGAAGATTTTGATGATGAAGCATTTGGTAGACAAAAGCCGGTTGGATTCCTAACTGCGAGCATATCATAAAGAGTATTGCAGGTAGTAGTTGGTTTGGTTTGTTATTTCCTTTTCGAATTTGGATGTCATACTCTTATATGAATTAGGGTGTCTTTGATAATTTTACGGAGTTTTCACTGTTTAGTTCCAGTAATCAAGCTAGGCTCTTTGTTGGCTATTCATAGATCTGGAGTTCTCTTCTATTGCTAATTTAGCTGCCTTCTTTCTTTTGTAGCTCTTTCTAAAGCTATATCCTTTACTAAGGCTATGGCTCCCTTGGATTGAATATTTGTCCTTCTAACCCTAAATCCTAATATTTGCCTTTTACCTGTTAAACATTGT

mRNA sequence

TGTAAATGGAAGAGAGAGTGAGTCACTGGTGGCTGACTCGGAATGGCAAATGGCGAGTTGACTCAGTGGTCTGTGGTGTCTGTGTTGGGTTCCAGTTCCGCTCACAGTTTCTCTCTCTTCTGCCCTTTTTCGTCTTTTCCCACTCTTCTTCTTCCTTGCAATCCGACGCTCCATTTCCATCCACGTCATCATCGTCTTCTTCAATCTTCCTCTTCTTCTCCTTAAACCAATCTCTGGCTAGGGTTTCTATTTCCTTTCCTTAATGTTTTCGCGATTTCTCTTCTGGGTTTTACTTTTCGTGCATTGCGATTTCCGCTACGTTCTCTACAAGTTCATCCAATCGAGAATGAGGGTTTAGGTCGACTTGGTTATGTTCCGGTTTTGGAGTTGTTGGAATTTGATAGTCGGAGGGGTTAAATTCGGTTTTTTGTTAATTTTGTGGTTGATTTGGGGTTTTCATGTTTCAATATCAATATCGCTATTGAGAAGAACAATTTTAAGGTTTCGAGGTTTGATTATGAGTTTTCACCTGGGAGTACTAAGAGCAGCATTTCCAGTAATGATGAAGATGAGCTCCAAAGACATGCCTCTGCTGATGATGATGATGAACAGTTTGCTGATGCAGATTCTGGGGCGGGGTCCGATGATTATGATACCCTCGAATGGGGAGAGTGGAGTTTTGCCACCTTGATAATCAGACTTGTAGTATTCCTCTTGAGCTGTATGATCTTTCGGGTTTCGAAGATATATTGTCTGTTGATGTGTGGAATGGCTGCCTAACTGAACAGGACCGATTTAGCCTCTCTAGATATGGACCAAGAGATATATATGCTTACACTCAAAGAGCTTTTTACCGTTAGCAACTTCCATTTTGGAAGCCCAATAAAGATGTTGTTTAGCATGCTGAAGGGGGGTTTATGTGAGCCCAGAGTTGCCCTTTATCGTCATGGTCTCAACTTTTTTCAATGGCGGCAACACTATCATCTTCTGAGGAAGCATCAGAACAATATGGTTAGCAACCTATGTCAGATGAGAGATGCTTGGCTTAACTGTAGAGGATACAGCATGGAAGAGAGGCTTCGTGTCTTAAATCTTATGAGGAGTCAAAAAAGTTTCAACGATGAGATGGTCAATGGTTTAGAAACTGATACGTCGGATAGAGTTTCAGGTGAAGAATTTCATAGAAGGTTTAAGGACAAGAAAACTGCTGCCAAAATGCCCAACTTTTCTACATATATGTTGTGGAAGATGTATCTGATACACAAGTTAATCAAGTTGTAACTGGTGCATTGGACAGATTGCATTATGAACGTGATCCTTGTGTCCAATTTGATGGTGAAAGAAAACTGTGGGTTTATTTGCATATAGAACGCGAAGAAGAAGATTTCAGAGGACGATGGTACTTCATCTACTAAGAAATGGAAGAGGCCTAAAAAAGATGCTGTTGAGCAATCATCTAATCTTGGACTTGTGACAGTAGCTTACCATGCATCTGGAGAACATACTAGATATGACGTTTGCTCTGATCTTAACACAGAACCCCCACGTGATGATGATGATGTTAAAGGAATGGAACCAATTTATGGTGATGTGAGGCAAAATCTGGAGCATGGCATAGATAACAATCATGGGTCTGATCATGATGAGATTTCTCAAGTTCCACAGGTTATCGAAGTTTCTAATCCTATGGAAGAGACCAAGTTGATATGACAAGAAAATTCCACTAATGAAGATTTTGATGATGAAGCATTTGGTAGACAAAAGCCGGTTGGATTCCTAACTGCGAGCATATCATAAAGAGTATTGCAGGTAGTAGTTGGTTTGGTTTGTTATTTCCTTTTCGAATTTGGATGTCATACTCTTATATGAATTAGGGTGTCTTTGATAATTTTACGGAGTTTTCACTGTTTAGTTCCAGTAATCAAGCTAGGCTCTTTGTTGGCTATTCATAGATCTGGAGTTCTCTTCTATTGCTAATTTAGCTGCCTTCTTTCTTTTGTAGCTCTTTCTAAAGCTATATCCTTTACTAAGGCTATGGCTCCCTTGGATTGAATATTTGTCCTTCTAACCCTAAATCCTAATATTTGCCTTTTACCTGTTAAACATTGT

Coding sequence (CDS)

ATGGACCAAGAGATATATATGCTTACACTCAAAGAGCTTTTTACCGTTAGCAACTTCCATTTTGGAAGCCCAATAAAGATGTTGTTTAGCATGCTGAAGGGGGGTTTATGTGAGCCCAGAGTTGCCCTTTATCGTCATGGTCTCAACTTTTTTCAATGGCGGCAACACTATCATCTTCTGAGGAAGCATCAGAACAATATGGTTAGCAACCTATGTCAGATGAGAGATGCTTGGCTTAACTGTAGAGGATACAGCATGGAAGAGAGGCTTCGTGTCTTAAATCTTATGAGGAGTCAAAAAAGTTTCAACGATGAGATGGTCAATGGTTTAGAAACTGATACGTCGGATAGAGTTTCAGGTGAAGAATTTCATAGAAGGTTTAAGGACAAGAAAACTGCTGCCAAAATGCCCAACTTTTCTACATATATGTTGTGGAAGATGTATCTGATACACAAGTTAATCAAGTTGTAA

Protein sequence

MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLLRKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSGEEFHRRFKDKKTAAKMPNFSTYMLWKMYLIHKLIKL

Homology

[Close]

BLAST of Sed0008185 vs. NCBI nr
Match: XP_038902696.1 (uncharacterized protein LOC120089332 [Benincasa hispida] >XP_038902697.1 uncharacterized protein LOC120089332 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 6.5e-65
Identity = 124/142 (87.32%), Postives = 132/142 (92.96%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE +MLTLKELFT SNFHFGSPIKMLFSMLKGGLCEPRVALYRHGL FFQ RQHYHLL
Sbjct: 120 MDQETFMLTLKELFTGSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLKFFQRRQHYHLL 179

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVS+LCQMRDAWLNCRGYSM+ERLRVLNLMRSQKSF+DE   GLETD+SDR+SG
Sbjct: 180 RKHQNNMVSSLCQMRDAWLNCRGYSMDERLRVLNLMRSQKSFHDERAEGLETDSSDRISG 239

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FHRRFKDK  A+KMPNFS+Y
Sbjct: 240 EGFHRRFKDKIMASKMPNFSSY 261

[Close]

BLAST of Sed0008185 vs. NCBI nr
Match: KAG6570740.1 (Nuclear factor related to kappa-B-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.4 bits (651), Expect = 3.2e-64
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHIL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. NCBI nr
Match: XP_022943976.1 (uncharacterized protein LOC111448544 [Cucurbita moschata])

HSP 1 Score: 255.4 bits (651), Expect = 3.2e-64
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHIL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. NCBI nr
Match: KAG7010587.1 (Nuclear factor related to kappa-B-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 3.2e-64
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHIL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. NCBI nr
Match: XP_023511920.1 (uncharacterized protein LOC111776788 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 4.2e-64
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHVL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. ExPASy TrEMBL
Match: A0A6J1FT63 (uncharacterized protein LOC111448544 OS=Cucurbita moschata OX=3662 GN=LOC111448544 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 123/142 (86.62%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHIL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. ExPASy TrEMBL
Match: A0A6J1JEX1 (uncharacterized protein LOC111484415 OS=Cucurbita maxima OX=3661 GN=LOC111484415 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.5e-64
Identity = 122/142 (85.92%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT  NFHFGSPIKMLF+MLKGGLCEPRVALYRHGL FFQ RQHYH+L
Sbjct: 119 MDQETYMLTLKELFTGCNFHFGSPIKMLFNMLKGGLCEPRVALYRHGLKFFQRRQHYHIL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLM+SQKSF DE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMKSQKSFIDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E FH+RFKDKK A+KM NFS+Y
Sbjct: 239 EGFHKRFKDKKMASKMRNFSSY 260

[Close]

BLAST of Sed0008185 vs. ExPASy TrEMBL
Match: A0A1S4E4F3 (uncharacterized protein LOC103501890 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501890 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE +MLTLKELFT SNFHFGSP+KMLFSMLKGGLCEPRVALYR+GL FFQ RQHYHLL
Sbjct: 119 MDQETFMLTLKELFTGSNFHFGSPVKMLFSMLKGGLCEPRVALYRNGLKFFQRRQHYHLL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVS+LCQMRDAWLNCRGYSM+ERLRVLNLMRSQKSFNDE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSSLCQMRDAWLNCRGYSMDERLRVLNLMRSQKSFNDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E F RRFKDK  A+KMPNFS+Y
Sbjct: 239 EGFPRRFKDKIMASKMPNFSSY 260

[Close]

BLAST of Sed0008185 vs. ExPASy TrEMBL
Match: A0A5A7T107 (Nfrkb, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001060 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE +MLTLKELFT SNFHFGSP+KMLFSMLKGGLCEPRVALYR+GL FFQ RQHYHLL
Sbjct: 119 MDQETFMLTLKELFTGSNFHFGSPVKMLFSMLKGGLCEPRVALYRNGLKFFQRRQHYHLL 178

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNMVS+LCQMRDAWLNCRGYSM+ERLRVLNLMRSQKSFNDE   GLETD+SDR+SG
Sbjct: 179 RKHQNNMVSSLCQMRDAWLNCRGYSMDERLRVLNLMRSQKSFNDERTEGLETDSSDRISG 238

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E F RRFKDK  A+KMPNFS+Y
Sbjct: 239 EGFPRRFKDKIMASKMPNFSSY 260

[Close]

BLAST of Sed0008185 vs. ExPASy TrEMBL
Match: A0A6J1L2M9 (uncharacterized protein LOC111499854 OS=Cucurbita maxima OX=3661 GN=LOC111499854 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62
Identity = 120/142 (84.51%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MDQE YMLTLKELFT SNFHFGSPIKMLFSMLKGGLCEPRVALYRHGL FFQ RQHYHLL
Sbjct: 120 MDQETYMLTLKELFTGSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLKFFQRRQHYHLL 179

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTSDRVSG 120
           RKHQNNM+S LC MRD WLNCRGYSMEERLR+LNLMRSQKSF+ E ++GLETD+SDRVSG
Sbjct: 180 RKHQNNMISRLCWMRDDWLNCRGYSMEERLRILNLMRSQKSFDYERIDGLETDSSDRVSG 239

Query: 121 EEFHRRFKDKKTAAKMPNFSTY 143
           E F RRFKDKK A+K+ NFS+Y
Sbjct: 240 EGFRRRFKDKKVASKLHNFSSY 261

[Close]

BLAST of Sed0008185 vs. TAIR 10
Match: AT3G45830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-34
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           +DQ  +M TLKELF   NFHFGSP+K LF MLKGG CEPR  LY  G + F   +HYH L
Sbjct: 121 VDQLTFMRTLKELFEGCNFHFGSPVKKLFDMLKGGQCEPRNTLYLEGRSLFLRTKHYHSL 180

Query: 61  RKHQNNMVSNLCQMRDAWLNCRGYSMEERLRVLNLMRSQKSFNDEMVNGLETDTS--DRV 120
           RK+ N+MV NLCQ RDAW +C+GYS++E+LRVLN+++SQK+   E  +  E D+S  D  
Sbjct: 181 RKYHNDMVVNLCQTRDAWTSCKGYSIDEKLRVLNIVKSQKTLMREKKDDFEDDSSEKDEP 240

Query: 121 SGEEFHRRFKDKKTAAK 136
             + + R+ KD+K+  K
Sbjct: 241 FDKPWGRKGKDRKSTQK 257

[Close]

BLAST of Sed0008185 vs. TAIR 10
Match: AT1G02290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45830.1); Has 134 Blast hits to 134 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 24/79 (30.38%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 1   MDQEIYMLTLKELFTVSNFHFGSPIKMLFSMLKGGLCEPRVALYRHGLNFFQWRQHYHLL 60
           MD + + LT++EL   +N +FG+P    +  L GGL  P+VA ++ G+ F + R++Y+ L
Sbjct: 76  MDPQTFSLTMQELLDGANLYFGNPEDKFYKNLLGGLFTPKVACFKEGVMFVKRRKYYYSL 135

Query: 61  RKHQNNMVSNLCQMRDAWL 80
           + +   ++    +M+  W+
Sbjct: 136 KFYHEKLIRTFTEMQRVWV 154

The following BLAST results are available for this feature:

BLAST of Sed0008185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902696.1	6.5e-65	87.32	uncharacterized protein LOC120089332 [Benincasa hispida] >XP_038902697.1 unchara...	[more]
KAG6570740.1	3.2e-64	86.62	Nuclear factor related to kappa-B-binding protein, partial [Cucurbita argyrosper...	[more]
XP_022943976.1	3.2e-64	86.62	uncharacterized protein LOC111448544 [Cucurbita moschata]	[more]
KAG7010587.1	3.2e-64	86.62	Nuclear factor related to kappa-B-binding protein, partial [Cucurbita argyrosper...	[more]
XP_023511920.1	4.2e-64	86.62	uncharacterized protein LOC111776788 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0008185 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0008185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT63	1.6e-64	86.62	uncharacterized protein LOC111448544 OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]
A0A6J1JEX1	3.5e-64	85.92	uncharacterized protein LOC111484415 OS=Cucurbita maxima OX=3661 GN=LOC111484415...	[more]
A0A1S4E4F3	1.0e-63	85.92	uncharacterized protein LOC103501890 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7T107	1.0e-63	85.92	Nfrkb, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1L2M9	1.9e-62	84.51	uncharacterized protein LOC111499854 OS=Cucurbita maxima OX=3661 GN=LOC111499854...	[more]

BLAST of Sed0008185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45830.1	2.2e-34	52.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G02290.1	1.2e-08	30.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13052:SF0	NUCLEAR FACTOR RELATED TO KAPPA-B-BINDING PROTEIN	coord: 1..118
IPR024867	Nuclear factor related to kappa-B-binding protein	PANTHER	PTHR13052	NFRKB-RELATED	coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008185.1	Sed0008185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031011	Ino80 complex