Sed0008183 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGGTACGTGAGGATTCAAGTTCAACCGAATCAACACTTACTCGTGGAGTTTTTGATGCAGAAGTTTCAAGAATAAAACTTGCAAAACTGATCATAATTGAAAAATTGCCCCTCAAGTTTGTGGAGGCTGAAGGATTTAGAGAGTTTTTGGAGGCTAAGGTGGGTACTCATGTTCCAGACTTCGAGTTTCCTTCTGTAGCCTCACTAATCAAGGATATATTTGAAATATACAAGGCAGAGAAACAATCTTTGAGAAACATTTTTATAGAACAACGTCCTAGAGTTTCTCTCACAATCGATACTTGGACATCAGTTCATGGTGAAGACCATACAGTTCTAACTGCGCATTTCATTGATGTCAATTGGAAATTGCAGAGGAGGGTTCTTAATTTTCGTTCAATTGAGAATTTCGATGGAGAGATTATAGTAAAAGAAGTAGTAGACCATTTGGAAGAATGGGGTATTGAAAATATATTGACGTTGACGGTTGATAATGCAATTTTAAACGATGCTGCGATTGCTTATTTAGTTCACAATTTCAAGAAGAAGTTGGTTTTGGATGGTTAATTTGTCGATGTTAGGGTTTGTGCCCATATTCTGGATATGATTGCATTGGATGTTATAGAAGATTATCACCAGTCGATATCTAAGATTCGAAATGTTGTCATGTTTGTGAGATCTTGTCTGGAACGATTTAGTAGCTTTGAAAAATGTATCAAAGAGGAGAACATATCTTGCAAGAGTGGTATGTGTATTCTTGATTTTCCGTCTCGATGGAACCAGACGTACATGATGCTTGAGGGAGCAGAGAAGTTCGAAAAGGCATTTGAGAGACTAGGGATCCATGACATGGATTATTTGGAAGAGGATGTTCCCTCTAGTAGAGATTGGGAGGTTGCCAGAGCACTTGCTCATATATTATAGGTATTTTATAAAGCATCTCTAAGACTTTGGTTCTCTCCATGTCCCTGCAAATGTGGTTTTTCACCAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTTCGATGCGATAGAAGAGGATACAGATGTAGCTAAAGAGTTGGAGATCTATGAGGCTCTATTTAGCTATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGAGTGGGTTAGGTTAGGGTTTAGACATCCAATTGTTAAATGAGTTATTGAGAGATTTATTGTAGGGCTCAAGAGATTCTCTTGAGAAGGGAGGTTCCAAGTTCCTATCAAAACTTGGTTTATCTTTATTCTTTTATCTTTTGATATAATCTAGATCCTGGATCATATCAATTGGTATCAGAGCCGTTTGCCGATCCGGGAATGGTTCTACTAAGATGGAAACAAGGATGCTTGAGTGTGAAGAAAGAACTACCGACTTGGCGAGGAAGTTACTGGAGACGAACGCAAAGATGGAATTGATGGAGGAACGATTGGGAAGAAAGATAGATTTGCAGGATTTGAAGTTCGAGAGCATAAACCGAAAGCTAGAACTATTAATGGAGTCATTCCGAGCTTACAAAGGGAAGGGTTTAATGATCGAGGCCTCGGAGGGTGGTGTGGCAGCTAGGGTTTTTACACCGTCGCCGCCGCCACCACCGTAGCCACCTCCGACATCGTTGCCGCCACCTCCGCCGTCATCGCCGCCGCCACCGCTGCCGCCGTCACCACCTCTGCCACCACCATCGTCACCGCCACCTCCGACATCGCTGCCGCCACCACCGCTACCGCTGCCGTTTCTCTCTGGCGATGCCACCGACGCCGCTGCCGCAAGATCGACCCGACATCGCATCACGCTGCCGGAAAAAAAAATTATTATTTATTATTTATTTATTTTTTTCTATTTTTATGTATGCCCACCTTGAGGACAAGGTGCTTTAAAGGGGCGGGTATTGATAAGGTTGGGCCTAGGGCTCTATTTAGCTATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGAGTGGATTAGGTTAGGGTTTAGACATCCAATTGTTAAATGAGTTATTGAGAGATTTATTGTAGGACTCAAGAGATTCTCTTGAGAAGGGAGGTTCCAAGTTCCTATCAAAACTTTGTTTATCTTTATTTTTTTATCTTTTGATATAATCTAGATCCTGGATCATATCAATCTACTTACTGGAGCGTTTTGTGCGTGAAGAGAAGAACTTCGACATATTAAAATGGTGGAAGTATAATTCTTTTAGGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGGTATGTAAATTTTAGTTTATGCTTACATCTAATAATGTGATTTTTTTTTGTTAATGTTATTTTGTATTTTCTTTTTCGCTCAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG MNAPFVDDFEVANEDENATTKAQNDRKPKGRLDDPYDESECEYCGALYSSHSKRNRMENTEAHPENQCNKYPFRRTCCSGAEEEEDEEISTIQNCIKKCSSKNDNLVAKYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGESSTDDDYMKAFGFQEMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVDIREEIEEAIRIDEEFARLQEESSEEEGEKDD Homology
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152195.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia] >XP_022152196.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 4.4e-41 Identity = 116/270 (42.96%), Postives = 149/270 (55.19%), Query Frame = 0
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152188.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-39 Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152189.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-39 Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152198.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica charantia]) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36 Identity = 109/263 (41.44%), Postives = 141/263 (53.61%), Query Frame = 0
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152197.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica charantia]) HSP 1 Score: 159.8 bits (403), Expect = 3.6e-35 Identity = 109/268 (40.67%), Postives = 142/268 (52.99%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.0e-11 Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10 Identity = 73/280 (26.07%), Postives = 120/280 (42.86%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 71/280 (25.36%), Postives = 124/280 (44.29%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.3e-08 Identity = 51/198 (25.76%), Postives = 95/198 (47.98%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06 Identity = 55/191 (28.80%), Postives = 81/191 (42.41%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DGW5 (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charantia OX=3673 GN=LOC111019972 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 116/270 (42.96%), Postives = 149/270 (55.19%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DFA9 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DE70 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DE80 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.5e-37 Identity = 109/263 (41.44%), Postives = 141/263 (53.61%), Query Frame = 0
BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DFJ0 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35 Identity = 109/268 (40.67%), Postives = 142/268 (52.99%), Query Frame = 0
BLAST of Sed0008183 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12 Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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