Sed0008183 (gene) Chayote v1

Overview
NameSed0008183
Typegene
OrganismSechium edule (Chayote v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
LocationLG06: 4398191 .. 4401376 (-)
RNA-Seq ExpressionSed0008183
SyntenySed0008183
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGGTACGTGAGGATTCAAGTTCAACCGAATCAACACTTACTCGTGGAGTTTTTGATGCAGAAGTTTCAAGAATAAAACTTGCAAAACTGATCATAATTGAAAAATTGCCCCTCAAGTTTGTGGAGGCTGAAGGATTTAGAGAGTTTTTGGAGGCTAAGGTGGGTACTCATGTTCCAGACTTCGAGTTTCCTTCTGTAGCCTCACTAATCAAGGATATATTTGAAATATACAAGGCAGAGAAACAATCTTTGAGAAACATTTTTATAGAACAACGTCCTAGAGTTTCTCTCACAATCGATACTTGGACATCAGTTCATGGTGAAGACCATACAGTTCTAACTGCGCATTTCATTGATGTCAATTGGAAATTGCAGAGGAGGGTTCTTAATTTTCGTTCAATTGAGAATTTCGATGGAGAGATTATAGTAAAAGAAGTAGTAGACCATTTGGAAGAATGGGGTATTGAAAATATATTGACGTTGACGGTTGATAATGCAATTTTAAACGATGCTGCGATTGCTTATTTAGTTCACAATTTCAAGAAGAAGTTGGTTTTGGATGGTTAATTTGTCGATGTTAGGGTTTGTGCCCATATTCTGGATATGATTGCATTGGATGTTATAGAAGATTATCACCAGTCGATATCTAAGATTCGAAATGTTGTCATGTTTGTGAGATCTTGTCTGGAACGATTTAGTAGCTTTGAAAAATGTATCAAAGAGGAGAACATATCTTGCAAGAGTGGTATGTGTATTCTTGATTTTCCGTCTCGATGGAACCAGACGTACATGATGCTTGAGGGAGCAGAGAAGTTCGAAAAGGCATTTGAGAGACTAGGGATCCATGACATGGATTATTTGGAAGAGGATGTTCCCTCTAGTAGAGATTGGGAGGTTGCCAGAGCACTTGCTCATATATTATAGGTATTTTATAAAGCATCTCTAAGACTTTGGTTCTCTCCATGTCCCTGCAAATGTGGTTTTTCACCAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTTCGATGCGATAGAAGAGGATACAGATGTAGCTAAAGAGTTGGAGATCTATGAGGCTCTATTTAGCTATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGAGTGGGTTAGGTTAGGGTTTAGACATCCAATTGTTAAATGAGTTATTGAGAGATTTATTGTAGGGCTCAAGAGATTCTCTTGAGAAGGGAGGTTCCAAGTTCCTATCAAAACTTGGTTTATCTTTATTCTTTTATCTTTTGATATAATCTAGATCCTGGATCATATCAATTGGTATCAGAGCCGTTTGCCGATCCGGGAATGGTTCTACTAAGATGGAAACAAGGATGCTTGAGTGTGAAGAAAGAACTACCGACTTGGCGAGGAAGTTACTGGAGACGAACGCAAAGATGGAATTGATGGAGGAACGATTGGGAAGAAAGATAGATTTGCAGGATTTGAAGTTCGAGAGCATAAACCGAAAGCTAGAACTATTAATGGAGTCATTCCGAGCTTACAAAGGGAAGGGTTTAATGATCGAGGCCTCGGAGGGTGGTGTGGCAGCTAGGGTTTTTACACCGTCGCCGCCGCCACCACCGTAGCCACCTCCGACATCGTTGCCGCCACCTCCGCCGTCATCGCCGCCGCCACCGCTGCCGCCGTCACCACCTCTGCCACCACCATCGTCACCGCCACCTCCGACATCGCTGCCGCCACCACCGCTACCGCTGCCGTTTCTCTCTGGCGATGCCACCGACGCCGCTGCCGCAAGATCGACCCGACATCGCATCACGCTGCCGGAAAAAAAAATTATTATTTATTATTTATTTATTTTTTTCTATTTTTATGTATGCCCACCTTGAGGACAAGGTGCTTTAAAGGGGCGGGTATTGATAAGGTTGGGCCTAGGGCTCTATTTAGCTATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGAGTGGATTAGGTTAGGGTTTAGACATCCAATTGTTAAATGAGTTATTGAGAGATTTATTGTAGGACTCAAGAGATTCTCTTGAGAAGGGAGGTTCCAAGTTCCTATCAAAACTTTGTTTATCTTTATTTTTTTATCTTTTGATATAATCTAGATCCTGGATCATATCAATCTACTTACTGGAGCGTTTTGTGCGTGAAGAGAAGAACTTCGACATATTAAAATGGTGGAAGTATAATTCTTTTAGGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGGTATGTAAATTTTAGTTTATGCTTACATCTAATAATGTGATTTTTTTTTGTTAATGTTATTTTGTATTTTCTTTTTCGCTCAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG

mRNA sequence

ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG

Coding sequence (CDS)

ATGAATGCCCCATTTGTAGATGACTTCGAGGTTGCTAATGAGGATGAAAATGCTACTACAAAAGCTCAAAACGATAGGAAACCTAAAGGTAGGCTCGATGATCCTTATGATGAGTCCGAGTGTGAATACTGTGGTGCCTTGTACAGCAGTCATTCAAAGAGGAATAGGATGGAAAATACGGAAGCACATCCCGAGAATCAGTGCAACAAGTATCCTTTTCGGCGTACTTGCTGTAGTGGGGCAGAGGAGGAGGAGGACGAGGAGATTAGCACTATCCAAAATTGTATAAAAAAGTGTTCATCCAAGAATGATAATCTTGTAGCTAAGTATGATAAGTACTGGGGGAATGATGAAAATGCCAATTACTTGTTATATGTTGCCATTGTTTTGGACCCTCGTTACAAGTTGAAATTTCTGTCATACTGCTTCGGAGAATTATATGGCGTCGATGTGGCGAAAGCGATGTGTAAGAAGGTTGAAGATATTTTGAGGCAATTATTTGATGAGAAAAGTTCGTCTATTGTCAAGAAGAACTCATCTACTCAAGGTACGACTGGTTCTTCAAATCTTGGAGAAAGTTCTAATGCTGGAGAAAGTTCTACCGATGACGACTATATGAAGGCTTTCGGTTTTCAGGAAATGTACAAAGTTCTTAGTAAAATTGCTCGAGCAATATTAGCAATTCCAGTATTCAGAGCTGCTTCAGAATCTACATTCAATATTTGTGGGGGTGTGATTGGTCCTATGACCTTTTCATCAGCTCCAGAAATAGTTCAGGCTCTTGCATGTGCACAAAATTGGCTAAATAGGGCACCTCTACGTGTCGATATTCGAGAAGAAATAGAGGAAGCTATTCGCATCGATGAAGAATTTGCACGCTTACAAGAAGAATCGAGCGAGGAGGAGGGCGAAAAAGATGATTAG

Protein sequence

MNAPFVDDFEVANEDENATTKAQNDRKPKGRLDDPYDESECEYCGALYSSHSKRNRMENTEAHPENQCNKYPFRRTCCSGAEEEEDEEISTIQNCIKKCSSKNDNLVAKYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGESSTDDDYMKAFGFQEMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVDIREEIEEAIRIDEEFARLQEESSEEEGEKDD
Homology
BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152195.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia] >XP_022152196.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 4.4e-41
Identity = 116/270 (42.96%), Postives = 149/270 (55.19%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EISTIQN IK+CSS   NL+         AKYDKYW N+ NANY LY+A+VLDPR K+KF
Sbjct: 435 EISTIQNYIKRCSSNGGNLILNDIAXKIQAKYDKYWWNNRNANYFLYIAVVLDPRXKMKF 494

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           L YCF EL+G +VAK MCKKVEDIL++LF E    I   + S       S+L + SN  +
Sbjct: 495 LMYCFSELFGANVAKEMCKKVEDILKKLFSEYRLLIRDYDDSP-----ISSLVDDSNTSK 554

Query: 208 SSTDD-----DYMKAFGFQEM--------------------------------------- 267
            +T+D      Y KA+ F++M                                       
Sbjct: 555 CTTNDVTEDIFYDKAYHFKDMFEKVREEDKNVDAATEVDLYLLEPLVDKFKEFDLLRYWQ 614

Query: 268 -----YKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLN 300
                ++VLS IAR ILAIPV   ASES FNI G VI  M  + AP +V+ LAC QNWLN
Sbjct: 615 CNSARFRVLSNIAREILAIPVSTIASESVFNISGRVIDSMCLTLAPNLVEVLACLQNWLN 674

BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152188.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-39
Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EI TIQN IKK SS +DNLV         AKYDKYWGNDENANYLLY+A+VLDPRYK+KF
Sbjct: 395 EIITIQNYIKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKF 454

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVK-KNSSTQGTTGSSNLGESSNAG 207
           L YCF EL+G +VAK MCKKVEDILRQLF E    I    +S T    G  N    +   
Sbjct: 455 LLYCFSELFGANVAKEMCKKVEDILRQLFSEYRLLIRDYHDSPTSSMDGYFNTRTCTTDD 514

Query: 208 ESSTDD----------------------------------DYMKAFGFQE-------MYK 267
           E   DD                                  D  K F   +        ++
Sbjct: 515 EDIFDDEAYHLKDMFEKVKEEDKNVDAATEVDLYLLEPLVDKFKEFDLLKYWWRNCHRFR 574

Query: 268 VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVD 290
           VLS+I R ILAIPV   ASES F I G +I     + AP +V+ LAC QNWLN   + +D
Sbjct: 575 VLSEITREILAIPVSTIASESAFKIGGRMIDSTCLTLAPNLVEVLACLQNWLNTDNVGID 634

BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152189.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 4.2e-39
Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EI TIQN IKK SS +DNLV         AKYDKYWGNDENANYLLY+A+VLDPRYK+KF
Sbjct: 395 EIITIQNYIKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKF 454

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVK-KNSSTQGTTGSSNLGESSNAG 207
           L YCF EL+G +VAK MCKKVEDILRQLF E    I    +S T    G  N    +   
Sbjct: 455 LLYCFSELFGANVAKEMCKKVEDILRQLFSEYRLLIRDYHDSPTSSMDGYFNTRTCTTDD 514

Query: 208 ESSTDD----------------------------------DYMKAFGFQE-------MYK 267
           E   DD                                  D  K F   +        ++
Sbjct: 515 EDIFDDEAYHLKDMFEKVKEEDKNVDAATEVDLYLLEPLVDKFKEFDLLKYWWRNCHRFR 574

Query: 268 VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVD 290
           VLS+I R ILAIPV   ASES F I G +I     + AP +V+ LAC QNWLN   + +D
Sbjct: 575 VLSEITREILAIPVSTIASESAFKIGGRMIDSTCLTLAPNLVEVLACLQNWLNTDNVGID 634

BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152198.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica charantia])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 109/263 (41.44%), Postives = 141/263 (53.61%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EIST+QN IK     +DNLV          KYDKYW N E+ANYL+YV++VL P  K+KF
Sbjct: 123 EISTLQNYIKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKF 182

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           LSYCF +L+  +VA+ MCKKVEDILRQLF+E S SI   +S T      SN  E S    
Sbjct: 183 LSYCFRKLFDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECST--N 242

Query: 208 SSTDDDY---------------------------------MKAFGFQ------------- 267
            +TDD++                                 ++A   Q             
Sbjct: 243 DATDDEFDTFDYYYDVIHKFYAAMEEEDNLNLATEVDIYLLEACANQGKDFDILKWWKDN 302

Query: 268 -EMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRA 295
              YKVL KIAR ILAIPV   A+ES F+I G VI  + F+SAP +V+ LAC Q+WLN  
Sbjct: 303 SSRYKVLGKIAREILAIPVSTIAAESAFDIGGRVIDSVCFTSAPNLVEVLACLQSWLNED 362

BLAST of Sed0008183 vs. NCBI nr
Match: XP_022152197.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-35
Identity = 109/268 (40.67%), Postives = 142/268 (52.99%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EIST+QN IK     +DNLV          KYDKYW N E+ANYL+YV++VL P  K+KF
Sbjct: 123 EISTLQNYIKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKF 182

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           LSYCF +L+  +VA+ MCKKVEDILRQLF+E S SI   +S T      SN  E S    
Sbjct: 183 LSYCFRKLFDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECST--N 242

Query: 208 SSTDDDY---------------------------------MKAFGFQ------------- 267
            +TDD++                                 ++A   Q             
Sbjct: 243 DATDDEFDTFDYYYDVIHKFYAAMEEEDNLNLATEVDIYLLEACANQGKDFDILKWWKDN 302

Query: 268 -EMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRA 300
              YKVL KIAR ILAIPV   A+ES F+I G VI  + F+SAP +V+ LAC Q+WLN  
Sbjct: 303 SSRYKVLGKIAREILAIPVSTIAAESAFDIGGRVIDSVCFTSAPNLVEVLACLQSWLNED 362

BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-11
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 0

Query: 109 KYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQLFD 168
           K DKYW    + + +L +A+V+DPR+K+K + + F +++G D  K + K V+D + +LF 
Sbjct: 498 KVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNI-KTVDDGIHELFT 557

Query: 169 EKSSSIVKKNSSTQG--TTGSSN----LGESSNAGESSTDDDYM--------KAFGFQEM 228
           E  +    +N++++G    G S+    + E++     S  D Y+        + F   + 
Sbjct: 558 EYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDETLLPRVQEFDVLDW 617

Query: 229 YK-------VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNW 269
           +K        LSK+AR IL+IPV  AA +  F++    +     S  PE V+AL CA+ W
Sbjct: 618 WKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREW 674

BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 73/280 (26.07%), Postives = 120/280 (42.86%), Query Frame = 0

Query: 38  ESECEYCGALY-SSHSKRNRMENTEAHPENQCNKYPFRRTCCSGAEEEEDEEISTIQNCI 97
           E+ C Y   LY S+HS       T     ++  K        S A   ED   S+I    
Sbjct: 444 EAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLE---LSNATGREDPVFSSIAK-- 503

Query: 98  KKCSSKNDNLVAKYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMC 157
                   ++  ++DKYW   ++ N +L +A+V+DPR+K+K + + + ++YGV+ AK + 
Sbjct: 504 --------DMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYV- 563

Query: 158 KKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNA--------GESSTD-DDYMK 217
           K V+D + +L++E  +  +    +     G +N   S N+        G+   D D Y+ 
Sbjct: 564 KVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDFDMYLS 623

Query: 218 AFGFQE--------------------------------MYKVLSKIARAILAIPVFRAAS 273
                +                                 Y  LSK+AR ILAIP+   +S
Sbjct: 624 EIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSS 683

BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 71/280 (25.36%), Postives = 124/280 (44.29%), Query Frame = 0

Query: 38  ESECEYCGALY-SSHSKRNRMENTEAHPENQCNKYPFRRTCCSGAEEEEDEEISTIQNCI 97
           E+ C Y   LY S+HS       T     ++  K        S A   ED   S+I    
Sbjct: 444 EAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLE---LSNATGHEDPVFSSIAK-- 503

Query: 98  KKCSSKNDNLVAKYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMC 157
                   ++  ++DKYW   ++ N +L +A+V+DPR+K+K + + + ++YGV+ AK + 
Sbjct: 504 --------DMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYV- 563

Query: 158 KKVEDILRQLFDE----------------KSSSIVKKNSSTQGTTGSSN---------LG 217
           K V+D + +L+ E                  ++     + TQ T  S+          L 
Sbjct: 564 KVVDDAVHELYKEYVAQPLPLTPAYVEQGDGNNAPASENGTQATAPSTGDGLVDFDMYLS 623

Query: 218 ESSNAGESSTD-DDYM--------KAFGFQEMYKV-------LSKIARAILAIPVFRAAS 273
           E + +  + ++ + Y+        + F     +K+       LS++AR ILAIP+   +S
Sbjct: 624 EIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKFPTLSRMARDILAIPMSMVSS 683

BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.3e-08
Identity = 51/198 (25.76%), Postives = 95/198 (47.98%), Query Frame = 0

Query: 109 KYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQLFD 168
           ++DKYW   ++ N +L +A+V+DPR+K+K + + + +++ V+ AK + K V+D + +L+ 
Sbjct: 544 RFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAKYV-KVVDDAIHELYS 603

Query: 169 E--------KSSSIVKKNSSTQGTTGSSNLGESSNAGESSTD-------DDYMKA----- 228
           E        + + +   +++     G   L       E +T        + Y++      
Sbjct: 604 EYATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLSEIATSQPSISELEQYLEEALMPR 663

Query: 229 ---FGFQEMYKV-------LSKIARAILAIPVFRAASESTFNIC----GGVIGPMTFSSA 273
              F   E +K+       LSK+AR +LAIP+   +S S+          ++     S  
Sbjct: 664 IQDFEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLR 723

BLAST of Sed0008183 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 55/191 (28.80%), Postives = 81/191 (42.41%), Query Frame = 0

Query: 109 KYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQL-- 168
           K++KYW   + +N  L VA  LDPRYK   + +   + +G D  K        ++R+L  
Sbjct: 565 KFEKYW---KVSNIALAVACFLDPRYKKILIEFYMKKFHG-DSYKVHVDDFVRVIRKLYQ 624

Query: 169 FDEKSSSIVKKNSSTQGTTGSSNLGESS--------------NAGESSTDDDYMKA---- 228
           F    S    K  +T   +    L E+               +  ES+  D YM      
Sbjct: 625 FYSSCSPSAPKTKTTTNDSMDDTLMENEDDEFQNYLHELKDYDQVESNELDKYMSEPLLK 684

Query: 229 -----------FGFQEMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEI 269
                       G    Y +L++IAR +LAI V   ASES F+  G V+ P       EI
Sbjct: 685 HSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRVVDPYRNRLGSEI 744

BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DGW5 (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charantia OX=3673 GN=LOC111019972 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41
Identity = 116/270 (42.96%), Postives = 149/270 (55.19%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EISTIQN IK+CSS   NL+         AKYDKYW N+ NANY LY+A+VLDPR K+KF
Sbjct: 435 EISTIQNYIKRCSSNGGNLILNDIAXKIQAKYDKYWWNNRNANYFLYIAVVLDPRXKMKF 494

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           L YCF EL+G +VAK MCKKVEDIL++LF E    I   + S       S+L + SN  +
Sbjct: 495 LMYCFSELFGANVAKEMCKKVEDILKKLFSEYRLLIRDYDDSP-----ISSLVDDSNTSK 554

Query: 208 SSTDD-----DYMKAFGFQEM--------------------------------------- 267
            +T+D      Y KA+ F++M                                       
Sbjct: 555 CTTNDVTEDIFYDKAYHFKDMFEKVREEDKNVDAATEVDLYLLEPLVDKFKEFDLLRYWQ 614

Query: 268 -----YKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLN 300
                ++VLS IAR ILAIPV   ASES FNI G VI  M  + AP +V+ LAC QNWLN
Sbjct: 615 CNSARFRVLSNIAREILAIPVSTIASESVFNISGRVIDSMCLTLAPNLVEVLACLQNWLN 674

BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DFA9 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EI TIQN IKK SS +DNLV         AKYDKYWGNDENANYLLY+A+VLDPRYK+KF
Sbjct: 395 EIITIQNYIKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKF 454

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVK-KNSSTQGTTGSSNLGESSNAG 207
           L YCF EL+G +VAK MCKKVEDILRQLF E    I    +S T    G  N    +   
Sbjct: 455 LLYCFSELFGANVAKEMCKKVEDILRQLFSEYRLLIRDYHDSPTSSMDGYFNTRTCTTDD 514

Query: 208 ESSTDD----------------------------------DYMKAFGFQE-------MYK 267
           E   DD                                  D  K F   +        ++
Sbjct: 515 EDIFDDEAYHLKDMFEKVKEEDKNVDAATEVDLYLLEPLVDKFKEFDLLKYWWRNCHRFR 574

Query: 268 VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVD 290
           VLS+I R ILAIPV   ASES F I G +I     + AP +V+ LAC QNWLN   + +D
Sbjct: 575 VLSEITREILAIPVSTIASESAFKIGGRMIDSTCLTLAPNLVEVLACLQNWLNTDNVGID 634

BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DE70 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019968 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 114/253 (45.06%), Postives = 137/253 (54.15%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EI TIQN IKK SS +DNLV         AKYDKYWGNDENANYLLY+A+VLDPRYK+KF
Sbjct: 395 EIITIQNYIKKHSSNSDNLVLNDIAMKIQAKYDKYWGNDENANYLLYIAVVLDPRYKMKF 454

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVK-KNSSTQGTTGSSNLGESSNAG 207
           L YCF EL+G +VAK MCKKVEDILRQLF E    I    +S T    G  N    +   
Sbjct: 455 LLYCFSELFGANVAKEMCKKVEDILRQLFSEYRLLIRDYHDSPTSSMDGYFNTRTCTTDD 514

Query: 208 ESSTDD----------------------------------DYMKAFGFQE-------MYK 267
           E   DD                                  D  K F   +        ++
Sbjct: 515 EDIFDDEAYHLKDMFEKVKEEDKNVDAATEVDLYLLEPLVDKFKEFDLLKYWWRNCHRFR 574

Query: 268 VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRAPLRVD 290
           VLS+I R ILAIPV   ASES F I G +I     + AP +V+ LAC QNWLN   + +D
Sbjct: 575 VLSEITREILAIPVSTIASESAFKIGGRMIDSTCLTLAPNLVEVLACLQNWLNTDNVGID 634

BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DE80 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.5e-37
Identity = 109/263 (41.44%), Postives = 141/263 (53.61%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EIST+QN IK     +DNLV          KYDKYW N E+ANYL+YV++VL P  K+KF
Sbjct: 123 EISTLQNYIKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKF 182

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           LSYCF +L+  +VA+ MCKKVEDILRQLF+E S SI   +S T      SN  E S    
Sbjct: 183 LSYCFRKLFDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECST--N 242

Query: 208 SSTDDDY---------------------------------MKAFGFQ------------- 267
            +TDD++                                 ++A   Q             
Sbjct: 243 DATDDEFDTFDYYYDVIHKFYAAMEEEDNLNLATEVDIYLLEACANQGKDFDILKWWKDN 302

Query: 268 -EMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRA 295
              YKVL KIAR ILAIPV   A+ES F+I G VI  + F+SAP +V+ LAC Q+WLN  
Sbjct: 303 SSRYKVLGKIAREILAIPVSTIAAESAFDIGGRVIDSVCFTSAPNLVEVLACLQSWLNED 362

BLAST of Sed0008183 vs. ExPASy TrEMBL
Match: A0A6J1DFJ0 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35
Identity = 109/268 (40.67%), Postives = 142/268 (52.99%), Query Frame = 0

Query: 88  EISTIQNCIKKCSSKNDNLV---------AKYDKYWGNDENANYLLYVAIVLDPRYKLKF 147
           EIST+QN IK     +DNLV          KYDKYW N E+ANYL+YV++VL P  K+KF
Sbjct: 123 EISTLQNYIKMRGLNSDNLVLNGIAMKVQTKYDKYWWNSESANYLIYVSVVLSPCCKMKF 182

Query: 148 LSYCFGELYGVDVAKAMCKKVEDILRQLFDEKSSSIVKKNSSTQGTTGSSNLGESSNAGE 207
           LSYCF +L+  +VA+ MCKKVEDILRQLF+E S SI   +S T      SN  E S    
Sbjct: 183 LSYCFRKLFDANVAQEMCKKVEDILRQLFNEYSLSIDNNDSPTPSMFHHSNTRECST--N 242

Query: 208 SSTDDDY---------------------------------MKAFGFQ------------- 267
            +TDD++                                 ++A   Q             
Sbjct: 243 DATDDEFDTFDYYYDVIHKFYAAMEEEDNLNLATEVDIYLLEACANQGKDFDILKWWKDN 302

Query: 268 -EMYKVLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNWLNRA 300
              YKVL KIAR ILAIPV   A+ES F+I G VI  + F+SAP +V+ LAC Q+WLN  
Sbjct: 303 SSRYKVLGKIAREILAIPVSTIAAESAFDIGGRVIDSVCFTSAPNLVEVLACLQSWLNED 362

BLAST of Sed0008183 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-12
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 0

Query: 109 KYDKYWGNDENANYLLYVAIVLDPRYKLKFLSYCFGELYGVDVAKAMCKKVEDILRQLFD 168
           K DKYW    + + +L +A+V+DPR+K+K + + F +++G D  K + K V+D + +LF 
Sbjct: 498 KVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNI-KTVDDGIHELFT 557

Query: 169 EKSSSIVKKNSSTQG--TTGSSN----LGESSNAGESSTDDDYM--------KAFGFQEM 228
           E  +    +N++++G    G S+    + E++     S  D Y+        + F   + 
Sbjct: 558 EYMALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDETLLPRVQEFDVLDW 617

Query: 229 YK-------VLSKIARAILAIPVFRAASESTFNICGGVIGPMTFSSAPEIVQALACAQNW 269
           +K        LSK+AR IL+IPV  AA +  F++    +     S  PE V+AL CA+ W
Sbjct: 618 WKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREW 674

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022152195.14.4e-4142.96zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charanti... [more]
XP_022152188.14.2e-3945.06zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordi... [more]
XP_022152189.14.2e-3945.06zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordi... [more]
XP_022152198.11.1e-3641.44zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica ... [more]
XP_022152197.13.6e-3540.67zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica ... [more]
Match NameE-valueIdentityDescription
Q9M2N55.0e-1130.94Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=... [more]
B9FJG31.4e-1026.07Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
Q6AVI01.4e-0825.36Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
Q75HY52.3e-0825.76Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
P087702.8e-0628.80Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1DGW52.1e-4142.96zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Momordica charan... [more]
A0A6J1DFA92.0e-3945.06zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Momor... [more]
A0A6J1DE702.0e-3945.06zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Momor... [more]
A0A6J1DE805.5e-3741.44zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordic... [more]
A0A6J1DFJ01.8e-3540.67zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT3G42170.13.5e-1230.94BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..200
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 81..268
NoneNo IPR availablePANTHERPTHR23272:SF137ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKEcoord: 81..268
IPR025525hAT-like transposase, RNase-H foldPFAMPF14372DUF4413coord: 98..169
e-value: 3.1E-13
score: 49.8
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 212..268
e-value: 4.7E-12
score: 45.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 94..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008183.1Sed0008183.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity