Sed0008145 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTTTGCTACTTATAATTTTTTAATACATATATATATAAGAATTAAAAGAGAGAGAGAGAGAAAAAGTAGGGAGGATTAAGAGAGTGGATGAGGAAGTAATGAATGTGAGCATCCACTTCCTAAATTGGCCCTACGTTCTCTCTTCTCTTCATTCTCTCTATTTATACCTTCTTCTTCCCACTTTCTCTCTCCTCGCCGCCATGTCCGACGCCGACGACCACTGGGTCCACGTGGCCCTCTCCGACGACTCCCTCGTCGTCGACTTACTCCTCTGCCTCAACCGCCCTCCCCCCCTCCACTGGTCCCTCCGCCAGCCCCGCTCCCGCCCCACCCTTCCCCGCCACCACGACTCCGACGCCGCCGCCAGATCCAGTCCCACCACTCCTCTCTCCTGGTCTACCGCCGCCGCCGCCGCCGCATCATCTAAGGTTCGCTTCCCTTTTCTTCTTCTTCTTCTTCTCTAAACTCTGTCATTGCCTTCGAATTTACCAAACTGCCCCTAAACAACCTATCTTTTTAGGATTTACCCTTCCTTTCCCATTTCCACCGCCGGCTACTTTTCCGGCCATTTTATTTTCCGAAATTACCCAACTACCCCATTTCGACCAACTTTGAAATGAGGCGACCCTTCTCTCCCATTTCTCTGAATGGGTCAAAAGGGTGGCATTACCAAAAGGGTATTTTGGTCATTTGTGGATAAAACAAAATTGAGGGCTAAGGGAAAAAAAAGAGAGTCAAAGCCTTTCTCTCCATTGGCCCATGGATCTCCCACCTGGAATATGGATATGTGCCCCCCAAGTGATAGTCAAACCCTAACGCTACCACAAGGGTCATTTTCGTCTTTTCCCTCCCCCCTCAAAGATGAAAAGGGCCCCTCTTTATCGGTGGCGTGTTTCCGTGGCAACGAATTCTGTGTGTGTGTTTATGGTGTTGGTGGTTGTGCCCTTTTTTATGTTCGGTTTATGAAATTTATAAAAAAAAAAAAACAAAACAAATCTAGTGTGGTCGGTTGCATCATAGCTTTGTGCACTTGCTTCATCTTCACCCTTCTTTTTTCCATTACCTGACAAAAGTTTGTGTTTTTTTTTAATGTTAAAGAGAGATTAGCTTCATGGGTATGGTCAAAAGATGGCTCTAGTGTTTCAGTTCTCTTCCATGACAGCCTGTGAATCTGATATCCTAAACTTTTTCCCTCCCCCCCTTTGTCACAAACATGAATTTCTGTGTCTTGAAAATGGTACTACAATGTTTCTCTTTTGAGACCATGCTGTTCCTTGGTGTGTAATCATGAGAAACAAAATCCTTCTTGTTTAGCCTTGCTAATTGTTGATTCTGACTCCCTCAAAGTCACTTGGTTCAGGACTTGCTGCTTCTTCATTGTGTTGGGTGGAGGGAGAGGGCCCCACTTGTGGAAAAAGAATCCAACTTGTGAAATGGGTCATACCTAATTCAATGGATTCCTTGATTTGGTTGTATTGGTGGTTCTTTTTTTTTTTTTTTTGAAAAAAGTTGTATTGGTGGTACTAATGATACCATTGGTTGTGTTAGGACTAGTGATAATTTTGACCGCTTACTTGTCGTCTAAACCTATAGTATTTGGTTGTCATTAATCCATAATCTTTTAGTCTGATCACTGAGTCAATTCATGACGGTTTAAAACACTAATAACTTCATCGTAACGTAGTTCGGTCAAGACATCGACCCGAGTTGATCGGGGAATCTGGGTTATTTTGTTCTTGATTTATGGATTTACTGCAATTTGAGTTGAATGAGGAATGACCTTTGAATGTATGTTTGTGTGCAGAATGCTGGTAAGAGTGAAGCAGTTGCAACAATGAAGAGACCAAGAAAGAAAAAGGTATGGTTTTTATCAGCCAAGAAATTCCCAATGCCACTTTACTTTTAAAGCTTTAGAGAGAATCAAAATCTTTCTTCTTCTTGCTTTTGTTTTTCACCCTTTGCTTTCCCTTTTCCTTTTCCATTTCCTCTTTTGGTTTGTGTGTTAGATTTTTAGTTTCTTTCCTTTTTGGGTGCCCATGGGCCATAGCCAATTTATGTGTGTTTTGGATTAAGCTGATTGAATTCATGGTGGATGGCAGACACTAGGAGAACTTAAAGAAGAGGAGGTTTTGCTACTGAAGGAAAGAAGAAGCTTGAAAGATGTATGTTTTTGTAAGAATGTGATAAATTTCGTTTTCTATCGCCAGTTTCGGTTGCGTTCTTGCTGAGTTTTTTCCTTTTATAAGGGCAGGCCTTGGCTACCTTGCAGCTCAATGTAGAAAAACAGAGGTCTATAAATGGAAGCTTGAAGAAAATGAAGGTGAAGAAACTCCACATTTTCGTATTCCTTGTATATGCTTTATTTAACTCGATTGTTGTTTTTTCTCTTTATGAAATGGAATTAGGAAATGAAGGTGAAGAAAATGAAGAAAATGCTCTTTATTTAACTCGATTGTTGTTTTTTCTCTTTATTTAACTTGAAGAAAATGAAGGTGAAGAAACTCCACATTTACTTCTCATACCTACTGGAATTATGACTGAAAAACTGCTGTTTTTTCTTTCTTTTGCTCCTTTTCTTATGTCCTTTTTGCTGATGTTTGCAAGCTGAGATTTATGGTTTGTGGTGGAGCTTAATTAGAGACTAGAGAATCCAATGACTTATTTTTTTAATAACAGATTCTTTGTTTTCAAAATAGTTCTCAAGTGAACTAGTCTTTTTTTTTACTTTTTACCTTCTTAAAGCAAGTACTTCAATGAGGATTGGAACAACTTGAGTAGTTCTAGAAAATATTCCATTCTTAACAACAAAGCAAAAGAAAATGAGATTTAATAAAAATTGTTGGCCAAACAAAAGCTGGTTTGGGAACTCCTCTCTCAAACAGTTACATGTGAATGCTGGTGTGTAATATGTTGAATACTTTGGGATTTTGAGTAATGAATAGATATCTTACGATATTGTGACAGTTCGATTGTCATTTTTTAAAACTGATTCTCAGTTACAGTTTGTCTGCTGTTATAATCGTGACATACGGACTTCTTAGTGTCGTCAGCTTTAGCGAGAGCAGGAAAATACTCGACATTGTCTTACGTTCAAGCTTAAATTGATCTTTACAATTAGATTGTCATTTTTTTTAAAATTGAATTTGTTATAGAAGCTAATTTGTTTTTTTTGTTTAAATTATACAGCTTGATTTCCAATCACAACAAGCGACCGAGATGGCTGTAGCATCTGCTGTTCTGAAAGAGGCAAGCTCCGACCAACCTCAACCGCAGGCACTGCTGACATCTATATGCAACACAACACCCGTCGGGGTCGATGCTTCATACCAATTACCTCTGCCAAACGTTTCTTGCAAATTAGAGGAGATGGGAACTATAGGGAGTGTTTGTTGTTTGTTGCCTGATCTTAATTTGCCTTTCCAAGAGGACTCCGGTGCTGAGGTCCTGTACCAAATGAGCTAA CCCATTTTGCTACTTATAATTTTTTAATACATATATATATAAGAATTAAAAGAGAGAGAGAGAGAAAAAGTAGGGAGGATTAAGAGAGTGGATGAGGAAGTAATGAATGTGAGCATCCACTTCCTAAATTGGCCCTACGTTCTCTCTTCTCTTCATTCTCTCTATTTATACCTTCTTCTTCCCACTTTCTCTCTCCTCGCCGCCATGTCCGACGCCGACGACCACTGGGTCCACGTGGCCCTCTCCGACGACTCCCTCGTCGTCGACTTACTCCTCTGCCTCAACCGCCCTCCCCCCCTCCACTGGTCCCTCCGCCAGCCCCGCTCCCGCCCCACCCTTCCCCGCCACCACGACTCCGACGCCGCCGCCAGATCCAGTCCCACCACTCCTCTCTCCTGGTCTACCGCCGCCGCCGCCGCCGCATCATCTAAGAATGCTGGTAAGAGTGAAGCAGTTGCAACAATGAAGAGACCAAGAAAGAAAAAGACACTAGGAGAACTTAAAGAAGAGGAGGTTTTGCTACTGAAGGAAAGAAGAAGCTTGAAAGATGCCTTGGCTACCTTGCAGCTCAATGTAGAAAAACAGAGGTCTATAAATGGAAGCTTGAAGAAAATGAAGCTTGATTTCCAATCACAACAAGCGACCGAGATGGCTGTAGCATCTGCTGTTCTGAAAGAGGCAAGCTCCGACCAACCTCAACCGCAGGCACTGCTGACATCTATATGCAACACAACACCCGTCGGGGTCGATGCTTCATACCAATTACCTCTGCCAAACGTTTCTTGCAAATTAGAGGAGATGGGAACTATAGGGAGTGTTTGTTGTTTGTTGCCTGATCTTAATTTGCCTTTCCAAGAGGACTCCGGTGCTGAGGTCCTGTACCAAATGAGCTAA ATGAATGTGAGCATCCACTTCCTAAATTGGCCCTACGTTCTCTCTTCTCTTCATTCTCTCTATTTATACCTTCTTCTTCCCACTTTCTCTCTCCTCGCCGCCATGTCCGACGCCGACGACCACTGGGTCCACGTGGCCCTCTCCGACGACTCCCTCGTCGTCGACTTACTCCTCTGCCTCAACCGCCCTCCCCCCCTCCACTGGTCCCTCCGCCAGCCCCGCTCCCGCCCCACCCTTCCCCGCCACCACGACTCCGACGCCGCCGCCAGATCCAGTCCCACCACTCCTCTCTCCTGGTCTACCGCCGCCGCCGCCGCCGCATCATCTAAGAATGCTGGTAAGAGTGAAGCAGTTGCAACAATGAAGAGACCAAGAAAGAAAAAGACACTAGGAGAACTTAAAGAAGAGGAGGTTTTGCTACTGAAGGAAAGAAGAAGCTTGAAAGATGCCTTGGCTACCTTGCAGCTCAATGTAGAAAAACAGAGGTCTATAAATGGAAGCTTGAAGAAAATGAAGCTTGATTTCCAATCACAACAAGCGACCGAGATGGCTGTAGCATCTGCTGTTCTGAAAGAGGCAAGCTCCGACCAACCTCAACCGCAGGCACTGCTGACATCTATATGCAACACAACACCCGTCGGGGTCGATGCTTCATACCAATTACCTCTGCCAAACGTTTCTTGCAAATTAGAGGAGATGGGAACTATAGGGAGTGTTTGTTGTTTGTTGCCTGATCTTAATTTGCCTTTCCAAGAGGACTCCGGTGCTGAGGTCCTGTACCAAATGAGCTAA MNVSIHFLNWPYVLSSLHSLYLYLLLPTFSLLAAMSDADDHWVHVALSDDSLVVDLLLCLNRPPPLHWSLRQPRSRPTLPRHHDSDAAARSSPTTPLSWSTAAAAAASSKNAGKSEAVATMKRPRKKKTLGELKEEEVLLLKERRSLKDALATLQLNVEKQRSINGSLKKMKLDFQSQQATEMAVASAVLKEASSDQPQPQALLTSICNTTPVGVDASYQLPLPNVSCKLEEMGTIGSVCCLLPDLNLPFQEDSGAEVLYQMS Homology
BLAST of Sed0008145 vs. NCBI nr
Match: XP_022959761.1 (uncharacterized protein LOC111460736 isoform X1 [Cucurbita moschata]) HSP 1 Score: 311.2 bits (796), Expect = 8.4e-81 Identity = 192/288 (66.67%), Postives = 217/288 (75.35%), Query Frame = 0
BLAST of Sed0008145 vs. NCBI nr
Match: XP_038896159.1 (uncharacterized protein LOC120084450 isoform X1 [Benincasa hispida]) HSP 1 Score: 300.4 bits (768), Expect = 1.5e-77 Identity = 190/298 (63.76%), Postives = 221/298 (74.16%), Query Frame = 0
BLAST of Sed0008145 vs. NCBI nr
Match: XP_023004780.1 (uncharacterized protein LOC111497981 isoform X1 [Cucurbita maxima]) HSP 1 Score: 295.8 bits (756), Expect = 3.6e-76 Identity = 183/277 (66.06%), Postives = 210/277 (75.81%), Query Frame = 0
BLAST of Sed0008145 vs. NCBI nr
Match: KAG6593372.1 (hypothetical protein SDJN03_12848, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 295.0 bits (754), Expect = 6.2e-76 Identity = 175/251 (69.72%), Postives = 194/251 (77.29%), Query Frame = 0
BLAST of Sed0008145 vs. NCBI nr
Match: XP_008461167.1 (PREDICTED: uncharacterized protein LOC103499830 [Cucumis melo]) HSP 1 Score: 291.6 bits (745), Expect = 6.9e-75 Identity = 171/241 (70.95%), Postives = 196/241 (81.33%), Query Frame = 0
BLAST of Sed0008145 vs. ExPASy TrEMBL
Match: A0A6J1H5R9 (uncharacterized protein LOC111460736 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460736 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 4.1e-81 Identity = 192/288 (66.67%), Postives = 217/288 (75.35%), Query Frame = 0
BLAST of Sed0008145 vs. ExPASy TrEMBL
Match: A0A6J1KVJ7 (uncharacterized protein LOC111497981 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497981 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.8e-76 Identity = 183/277 (66.06%), Postives = 210/277 (75.81%), Query Frame = 0
BLAST of Sed0008145 vs. ExPASy TrEMBL
Match: A0A1S3CDM0 (uncharacterized protein LOC103499830 OS=Cucumis melo OX=3656 GN=LOC103499830 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 3.3e-75 Identity = 171/241 (70.95%), Postives = 196/241 (81.33%), Query Frame = 0
BLAST of Sed0008145 vs. ExPASy TrEMBL
Match: A0A5D3CK05 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001800 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 4.8e-74 Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 0
BLAST of Sed0008145 vs. ExPASy TrEMBL
Match: A0A0A0K8M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432100 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.8e-73 Identity = 169/242 (69.83%), Postives = 195/242 (80.58%), Query Frame = 0
BLAST of Sed0008145 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 4.1e-17 Identity = 78/202 (38.61%), Postives = 104/202 (51.49%), Query Frame = 0
BLAST of Sed0008145 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-16 Identity = 66/183 (36.07%), Postives = 88/183 (48.09%), Query Frame = 0
BLAST of Sed0008145 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 3.0e-12 Identity = 85/275 (30.91%), Postives = 116/275 (42.18%), Query Frame = 0
BLAST of Sed0008145 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06 Identity = 54/158 (34.18%), Postives = 70/158 (44.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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