Sed0008035 (gene) Chayote v1

Overview


Name	Sed0008035
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NDR1/HIN1-like protein 3
Location	LG12: 10554504 .. 10555079 (-)
RNA-Seq Expression	Sed0008035
Synteny	Sed0008035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGAATTAAGAAGGTCTTCATAATATTCTCCATTATTGTCATCATAATTTTGCTTGCCATTGCCGCGGTCATCACCATATGGCGCTTAACCATGACCCACAAGGTCAAGTTCCATGTGATTGATGCCGACCTGACCCAATTCGACTACACTGACAATAACCAACATCTCCTATTCGACCTCAATGTCAACATGACTGTCAAAAACCCTCGTATCTTCGGAGTCTTTTTTGACGTCATCGAAGTGGTCGTGTTGTATCAAGACATGAGGTTTAGCAACATGTCATTGTCGCCTTTCTATGAAGCCAAAGATGGCTCGGGGCTACTCAAACTTAAGTTTGATGGTCAGCAATTAATGAACCTCGATCACGATCAGCTTGCTTTGTTCGCTCTTGAGAAACTTGCTGAGGCCTTCACCCTTAAATTGGAGCTTCGTCTTTGGATAAGGGTCAATATCGGCCTTATTAAGATCAAGCTCAAGCCCAAGGTTCGTTGTGGGTTTAAGGTGCCCTTGATTTCTCGTGAAAGATCGTTTGTTCAATTTAAAATCATCATGTCGTTTATTGATTTGTAA

mRNA sequence

ATGTCAAGAATTAAGAAGGTCTTCATAATATTCTCCATTATTGTCATCATAATTTTGCTTGCCATTGCCGCGGTCATCACCATATGGCGCTTAACCATGACCCACAAGGTCAAGTTCCATGTGATTGATGCCGACCTGACCCAATTCGACTACACTGACAATAACCAACATCTCCTATTCGACCTCAATGTCAACATGACTGTCAAAAACCCTCGTATCTTCGGAGTCTTTTTTGACGTCATCGAAGTGGTCGTGTTGTATCAAGACATGAGGTTTAGCAACATGTCATTGTCGCCTTTCTATGAAGCCAAAGATGGCTCGGGGCTACTCAAACTTAAGTTTGATGGTCAGCAATTAATGAACCTCGATCACGATCAGCTTGCTTTGTTCGCTCTTGAGAAACTTGCTGAGGCCTTCACCCTTAAATTGGAGCTTCGTCTTTGGATAAGGGTCAATATCGGCCTTATTAAGATCAAGCTCAAGCCCAAGGTTCGTTGTGGGTTTAAGGTGCCCTTGATTTCTCGTGAAAGATCGTTTGTTCAATTTAAAATCATCATGTCGTTTATTGATTTGTAA

Coding sequence (CDS)

ATGTCAAGAATTAAGAAGGTCTTCATAATATTCTCCATTATTGTCATCATAATTTTGCTTGCCATTGCCGCGGTCATCACCATATGGCGCTTAACCATGACCCACAAGGTCAAGTTCCATGTGATTGATGCCGACCTGACCCAATTCGACTACACTGACAATAACCAACATCTCCTATTCGACCTCAATGTCAACATGACTGTCAAAAACCCTCGTATCTTCGGAGTCTTTTTTGACGTCATCGAAGTGGTCGTGTTGTATCAAGACATGAGGTTTAGCAACATGTCATTGTCGCCTTTCTATGAAGCCAAAGATGGCTCGGGGCTACTCAAACTTAAGTTTGATGGTCAGCAATTAATGAACCTCGATCACGATCAGCTTGCTTTGTTCGCTCTTGAGAAACTTGCTGAGGCCTTCACCCTTAAATTGGAGCTTCGTCTTTGGATAAGGGTCAATATCGGCCTTATTAAGATCAAGCTCAAGCCCAAGGTTCGTTGTGGGTTTAAGGTGCCCTTGATTTCTCGTGAAAGATCGTTTGTTCAATTTAAAATCATCATGTCGTTTATTGATTTGTAA

Protein sequence

MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNPRIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSFVQFKIIMSFIDL

Homology

[Close]

BLAST of Sed0008035 vs. NCBI nr
Match: XP_022957840.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-58
Identity = 130/186 (69.89%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK  IIF  ++II++L + +++ +W +TM +K+KFHVIDADLTQF++TD+ Q LLF
Sbjct: 1   MSRTKKCMIIF--LIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
           DL VNM VKNP R FGVFFD IEV VLYQD++FSN SLSPFY+A+DGS LLKLKFDGQQL
Sbjct: 61  DLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNL+ +QLA+F LEKL E FTLKLELRL IRVNI LIKIKLKPKVRCG  +PLISR R+F
Sbjct: 121 MNLNAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTF 180

Query: 181 VQFKII 186
           ++F+II
Sbjct: 181 LRFQII 183

[Close]

BLAST of Sed0008035 vs. NCBI nr
Match: XP_023005830.1 (NDR1/HIN1-like protein 3 [Cucurbita maxima])

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-56
Identity = 126/186 (67.74%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK  IIF  ++II++L + +++ +W +TM +K+KFHVI ADLTQF++TD+NQ LLF
Sbjct: 1   MSRTKKCMIIF--LIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
           DL VNM VKNP R FGVFFD IEV +LYQD++FSN S+SPFY+ +DGS LLKLKFDGQQL
Sbjct: 61  DLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNL+ +QLA+F LEKL E FTLKLELRL IRVNI LIKIKLKPKV CG  +PLISR R+F
Sbjct: 121 MNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTF 180

Query: 181 VQFKII 186
           ++F+II
Sbjct: 181 LRFQII 183

[Close]

BLAST of Sed0008035 vs. NCBI nr
Match: KAG7028146.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.1 bits (562), Expect = 8.3e-54
Identity = 124/186 (66.67%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK  IIF  ++II++L + +++ +W +TM +K+KFHVIDADLTQF++TD+ Q LLF
Sbjct: 1   MSRTKKCMIIF--LIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
           DL VNM VKNP R FGVFFD IEV VLYQD++FSN SLSPFY+ +DGS LLKLKFDGQQL
Sbjct: 61  DLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQDQDGSKLLKLKFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNL+ +QLA+F LEKL E FTLKLEL     +NI LIKIKLKPKVRCG  +PLISR R+F
Sbjct: 121 MNLNAEQLAVFGLEKLVETFTLKLEL-----LNIDLIKIKLKPKVRCGLNLPLISRGRTF 178

Query: 181 VQFKII 186
           ++F+II
Sbjct: 181 LRFQII 178

[Close]

BLAST of Sed0008035 vs. NCBI nr
Match: KAG6596607.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-53
Identity = 116/154 (75.32%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 33  MTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMR 92
           M +K+KFHVIDADLTQF++TD+ Q LLFDL VNM VKNP R FGVFFD IEV VLYQD++
Sbjct: 1   MANKIKFHVIDADLTQFNFTDDKQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIK 60

Query: 93  FSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWIRV 152
           FSN SLSPFY+ +DGS LLKLKFDGQQLMNL+ +QLA+F LEKL E FTLKLELRL IRV
Sbjct: 61  FSNASLSPFYQDQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELRLQIRV 120

Query: 153 NIGLIKIKLKPKVRCGFKVPLISRERSFVQFKII 186
           NI LIKIKLKPKVRCG  +PLISR R+F++F+II
Sbjct: 121 NIDLIKIKLKPKVRCGLNLPLISRGRTFLRFQII 153

[Close]

BLAST of Sed0008035 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-51
Identity = 118/190 (62.11%), Postives = 154/190 (81.05%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK FIIF+II+I+++L   ++  +W +T THK+KF V +A+LTQF++TD++Q LLF
Sbjct: 1   MSRTKK-FIIFTIIIIVLVL--ISLFILWLITKTHKLKFQVTNANLTQFNFTDDSQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
            L++NMTVKNP R FGVFFD IEVVVLYQD++FSN+SLSPFY+ ++G  LL L FDGQQL
Sbjct: 61  QLSLNMTVKNPNRGFGVFFDSIEVVVLYQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNLD  QLA+F LEKL + F++KLELRL +RV IG I+IKL PKVRCG  +PLIS  RSF
Sbjct: 121 MNLDAQQLAVFTLEKLLDIFSIKLELRLRMRVKIGFIRIKLNPKVRCGLNLPLISHGRSF 180

Query: 181 VQFKIIMSFI 190
           ++F+II  ++
Sbjct: 181 IRFRIIDCYV 186

[Close]

BLAST of Sed0008035 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-18
Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 9   IIFSIIV-IIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMT 68
           +IF+I++ I +LL IAA+I IW +   + +KFHV DA LT+F   D   +L ++L++N T
Sbjct: 47  VIFNILITIAVLLGIAALI-IWLIFRPNAIKFHVTDAKLTEFT-LDPTNNLRYNLDLNFT 106

Query: 69  VKNP-RIFGVFFDVIEVVVLYQDMRFS-NMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHD 128
           ++NP R  GV++D IEV   Y D RF  + ++S FY+    + ++  K  GQQL+ LD  
Sbjct: 107 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 166

Query: 129 QLALFALEKLAEAFTLKLELRLWIRVNIGLIKI-KLKPKVRCGFKVPLISRERSFVQFK 184
           +      +  ++ + +  +LRL IR   GLIK  + KPK++C  KVPL S   S   F+
Sbjct: 167 ERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQ 223

[Close]

BLAST of Sed0008035 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 55/163 (33.74%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 13  IIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNP- 72
           II +I++L +AA+I  W +     +KFHV DA LT+FD+T  +  L ++L + + V+NP 
Sbjct: 45  IISLIVILGVAALI-FWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPN 104

Query: 73  RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFA 132
           +  G+++D IE    Y+  RFS ++L+PFY+    + +L   F GQ L+  +  Q     
Sbjct: 105 KRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLN 164

Query: 133 LEKLAEAFTLKLELRLWIRVNIGLIKI-KLKPKVRC-GFKVPL 173
            E+++  + ++++ RL +R  +G +K  ++KPKV C   ++PL
Sbjct: 165 AERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPL 206

[Close]

BLAST of Sed0008035 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 31  LTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNPR-IFGVFFDVIEVVVLYQD 90
           +  ++ VKF V DA+LT FD   NN +L + L++N++++N +   G+ +D  E  V Y +
Sbjct: 1   MVRSNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMN 60

Query: 91  MRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWI 150
            R   + +  FY     + LL+  F+GQ L+ L  ++   F  ++    + + ++L +  
Sbjct: 61  QRLGAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINF 120

Query: 151 RVNI-GLIKIKLKPKVRCGFKVPL 173
           RV +  L+   +KP VRC  K+PL
Sbjct: 121 RVMVLHLVTWPMKPVVRCHLKIPL 143

[Close]

BLAST of Sed0008035 vs. ExPASy TrEMBL
Match: A0A6J1H1R7 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 130/186 (69.89%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK  IIF  ++II++L + +++ +W +TM +K+KFHVIDADLTQF++TD+ Q LLF
Sbjct: 1   MSRTKKCMIIF--LIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
           DL VNM VKNP R FGVFFD IEV VLYQD++FSN SLSPFY+A+DGS LLKLKFDGQQL
Sbjct: 61  DLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNL+ +QLA+F LEKL E FTLKLELRL IRVNI LIKIKLKPKVRCG  +PLISR R+F
Sbjct: 121 MNLNAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTF 180

Query: 181 VQFKII 186
           ++F+II
Sbjct: 181 LRFQII 183

[Close]

BLAST of Sed0008035 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.6e-57
Identity = 126/186 (67.74%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK  IIF  ++II++L + +++ +W +TM +K+KFHVI ADLTQF++TD+NQ LLF
Sbjct: 1   MSRTKKCMIIF--LIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
           DL VNM VKNP R FGVFFD IEV +LYQD++FSN S+SPFY+ +DGS LLKLKFDGQQL
Sbjct: 61  DLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNL+ +QLA+F LEKL E FTLKLELRL IRVNI LIKIKLKPKV CG  +PLISR R+F
Sbjct: 121 MNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTF 180

Query: 181 VQFKII 186
           ++F+II
Sbjct: 181 LRFQII 183

[Close]

BLAST of Sed0008035 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.6e-49
Identity = 114/190 (60.00%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 1   MSRIKKVFIIFSIIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLF 60
           MSR KK FIIFSIIVI+++L   ++  +W +TMT K+KF V +A LT+F+ T+ +Q LLF
Sbjct: 1   MSRTKK-FIIFSIIVIVLIL--ISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQ-LLF 60

Query: 61  DLNVNMTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQL 120
            L++NM V+NP R FGVFFD IEV VLYQD++FSNMSLSPFY+ ++G  LL  +FDGQQL
Sbjct: 61  QLSLNMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQL 120

Query: 121 MNLDHDQLALFALEKLAEAFTLKLELRLWIRVNIGLIKIKLKPKVRCGFKVPLISRERSF 180
           MNLD +QLA+F LEKL + F++K+ELRL +RV IG I+IKL PKVRCG  +PL+S  RSF
Sbjct: 121 MNLDAEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSF 180

Query: 181 VQFKIIMSFI 190
           ++F+II  F+
Sbjct: 181 LRFRIIGCFV 186

[Close]

BLAST of Sed0008035 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 98/160 (61.25%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 31  LTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNP-RIFGVFFDVIEVVVLYQD 90
           +TMT K+KF V +A LT+F+ T+ +Q LLF L++NM V+NP R FGVFFD IEV VLYQD
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQ-LLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQD 60

Query: 91  MRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWI 150
           ++FSNMSLSPFY+ ++G  LL  +FDGQQLMNLD +QLA+F LEKL + F++K+ELRL +
Sbjct: 61  IKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHM 120

Query: 151 RVNIGLIKIKLKPKVRCGFKVPLISRERSFVQFKIIMSFI 190
           RV IG I+IKL PKVRCG  +PL+S  RSF++F+II  F+
Sbjct: 121 RVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFV 159

[Close]

BLAST of Sed0008035 vs. ExPASy TrEMBL
Match: A0A0A0LBJ3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 99/160 (61.88%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 31  LTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNP-RIFGVFFDVIEVVVLYQD 90
           +TMT K+KF V +A+LTQF+ TD++Q LLF L++NMTVKNP R FGVFFD IEV VLYQ 
Sbjct: 1   MTMTRKLKFQVNNANLTQFNLTDDSQ-LLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQG 60

Query: 91  MRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWI 150
           ++FSN+SLSPFY+ ++G   L  +FDGQQLMNLD  QLA+F LE+L + F++K+ELRL +
Sbjct: 61  IKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHM 120

Query: 151 RVNIGLIKIKLKPKVRCGFKVPLISRERSFVQFKIIMSFI 190
           RV IG I+IKL PKVRCG  +PLIS ERS  +F+II  F+
Sbjct: 121 RVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFV 159

[Close]

BLAST of Sed0008035 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-19
Identity = 69/179 (38.55%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 9   IIFSIIV-IIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMT 68
           +IF+I++ I +LL IAA+I IW +   + +KFHV DA LT+F   D   +L ++L++N T
Sbjct: 47  VIFNILITIAVLLGIAALI-IWLIFRPNAIKFHVTDAKLTEFT-LDPTNNLRYNLDLNFT 106

Query: 69  VKNP-RIFGVFFDVIEVVVLYQDMRFS-NMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHD 128
           ++NP R  GV++D IEV   Y D RF  + ++S FY+    + ++  K  GQQL+ LD  
Sbjct: 107 IRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGG 166

Query: 129 QLALFALEKLAEAFTLKLELRLWIRVNIGLIKI-KLKPKVRCGFKVPLISRERSFVQFK 184
           +      +  ++ + +  +LRL IR   GLIK  + KPK++C  KVPL S   S   F+
Sbjct: 167 ERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQ 223

[Close]

BLAST of Sed0008035 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 55/163 (33.74%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 13  IIVIIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNP- 72
           II +I++L +AA+I  W +     +KFHV DA LT+FD+T  +  L ++L + + V+NP 
Sbjct: 45  IISLIVILGVAALI-FWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPN 104

Query: 73  RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFA 132
           +  G+++D IE    Y+  RFS ++L+PFY+    + +L   F GQ L+  +  Q     
Sbjct: 105 KRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLN 164

Query: 133 LEKLAEAFTLKLELRLWIRVNIGLIKI-KLKPKVRC-GFKVPL 173
            E+++  + ++++ RL +R  +G +K  ++KPKV C   ++PL
Sbjct: 165 AERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPL 206

[Close]

BLAST of Sed0008035 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 48/169 (28.40%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 7   VFIIFSIIV-IIILLAIAAVITIWRLTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVN 66
           V II +I++ +++ L + A+I +W +   + VKF V +ADLT+F++   + +L +++++N
Sbjct: 51  VNIICNILIGVLVCLGVVALI-LWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLN 110

Query: 67  MTVKNP-RIFGVFFDVIEVVVLYQDMRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDH 126
            +++NP +  G+ +D +EV   Y D RFS  +++ FY+    + ++  + +GQ+L+ L  
Sbjct: 111 FSIRNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGA 170

Query: 127 DQLALFALEKLAEAFTLKLELRLWIRVNIGLIKI-KLKPKVRCGFKVPL 173
                F  ++ +  + + ++LR  +R   G +    ++PK++C  KVPL
Sbjct: 171 GGRRDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPL 218

[Close]

BLAST of Sed0008035 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 71.2 bits (173), Expect = 9.9e-13
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 31  LTMTHKVKFHVIDADLTQFDYTDNNQHLLFDLNVNMTVKNPR-IFGVFFDVIEVVVLYQD 90
           +  ++ VKF V DA+LT FD   NN +L + L++N++++N +   G+ +D  E  V Y +
Sbjct: 1   MVRSNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMN 60

Query: 91  MRFSNMSLSPFYEAKDGSGLLKLKFDGQQLMNLDHDQLALFALEKLAEAFTLKLELRLWI 150
            R   + +  FY     + LL+  F+GQ L+ L  ++   F  ++    + + ++L +  
Sbjct: 61  QRLGAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINF 120

Query: 151 RVNI-GLIKIKLKPKVRCGFKVPL 173
           RV +  L+   +KP VRC  K+PL
Sbjct: 121 RVMVLHLVTWPMKPVVRCHLKIPL 143

The following BLAST results are available for this feature:

BLAST of Sed0008035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957840.1	2.5e-58	69.89	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
XP_023005830.1	1.8e-56	67.74	NDR1/HIN1-like protein 3 [Cucurbita maxima]	[more]
KAG7028146.1	8.3e-54	66.67	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596607.1	5.4e-53	75.32	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038904446.1	1.7e-51	62.11	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]

BLAST of Sed0008035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNH6	2.6e-18	38.55	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	2.9e-17	33.74	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9C615	1.4e-11	30.56	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]

BLAST of Sed0008035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1R7	1.2e-58	69.89	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1	[more]
A0A6J1KYH7	8.6e-57	67.74	NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1	[more]
A0A5D3DNY5	8.6e-49	60.00	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TKH6	1.7e-44	61.25	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A0A0LBJ3	2.9e-44	61.88	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 ...	[more]

BLAST of Sed0008035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06320.1	1.9e-19	38.55	NDR1/HIN1-like 3	[more]
AT2G35980.1	2.1e-18	33.74	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35460.1	2.0e-13	28.40	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	9.9e-13	30.56	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 66..166 e-value: 6.2E-6 score: 26.7
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 9..182
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 9..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008035.1	Sed0008035.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane