Sed0008003 (gene) Chayote v1

Overview


Name	Sed0008003
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosome-inactivating protein SNAIf-like
Location	LG11: 7722191 .. 7722984 (+)
RNA-Seq Expression	Sed0008003
Synteny	Sed0008003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACACATCTAGTCGGTCGAGATGGACTATGTTTAGACAATGATGGGGCACATCGCTACAACTTCCCTAAAACAGTGCCATGCAAACGCATGGAAGATACCCAACTTTGGACATTCCCAGACGATGGCACAATTCGTTGGCACAACGACAGATGCCTATTCCCAGATGGCATGGAAGTTCTCCAATATTACACTTTCGTGAAAACGAGCGAATGCGACGAACTAAAAGCGGAAGAAAAAACATGGATTTTCAACAAAATGGCTTCATCATACATGTCCACTCTGGCCTCGTTCTAGCGCTGCAAAATAATGCCAATAATGTGAATGTTGAGCCTAATAGAAATGGGCCATAAAAAATCTGGAATGCAGTGGATGGACATGTTGCCCCACATGTCCCACGTGCCCCTTGCATCGGCTACATCATGGGAATTTATAGCCACAAGTGTCTATACTTCAACCCCGGTAATCCACTACTACGGTTAGGTAGTTGTTACACTTGGGCCTACCAAGTATGGACAGTGCTTGACGACTCAACAGTTCGTGTAAATGCTAATACATGTTTGTGCATGACTTCTTTTCAGTCGAGCAACCCTTATTATTTGATCGGCGTATTCGAATGTCAAGGCAAAGCCAAGCAACATTGGGAGATAGACTTACATGACTCCACCATTCACCACCCCGACTATACCATGGTCATGGATGCAATTACAATGCAATCGTCTAGTAAAGAATTGATTACTCTTTTTGGAAGTAATGGGGCTAGTACACAAAAATGGATGTTTTATGAATAA

mRNA sequence

ATGAAAACACATCTAGTCGGTCGAGATGGACTATGTTTAGACAATGATGGGGCACATCGCTACAACTTCCCTAAAACAGTGCCATGCAAACGCATGGAAGATACCCAACTTTGGACATTCCCAGACGATGGCACAATTCGTTGGCACAACGACAGATGCCTATTCCCAGATGGCATGGAAGTTCTCCAATATTACACTTTCGTGAAAACGAGCGAATGCGACGAACTAAAAGCGGAAGAAAAAACATGGATTTTCAACAAAATGGCTTCATCATACATGTCCACTCTGGCCTCCCACAAGTGTCTATACTTCAACCCCGGTAATCCACTACTACGGTTAGGTAGTTGTTACACTTGGGCCTACCAAGTATGGACAGTGCTTGACGACTCAACAGTTCGTGTAAATGCTAATACATGTTTGTGCATGACTTCTTTTCAGTCGAGCAACCCTTATTATTTGATCGGCGTATTCGAATGTCAAGGCAAAGCCAAGCAACATTGGGAGATAGACTTACATGACTCCACCATTCACCACCCCGACTATACCATGGTCATGGATGCAATTACAATGCAATCGTCTAGTAAAGAATTGATTACTCTTTTTGGAAGTAATGGGGCTAGTACACAAAAATGGATGTTTTATGAATAA

Coding sequence (CDS)

ATGAAAACACATCTAGTCGGTCGAGATGGACTATGTTTAGACAATGATGGGGCACATCGCTACAACTTCCCTAAAACAGTGCCATGCAAACGCATGGAAGATACCCAACTTTGGACATTCCCAGACGATGGCACAATTCGTTGGCACAACGACAGATGCCTATTCCCAGATGGCATGGAAGTTCTCCAATATTACACTTTCGTGAAAACGAGCGAATGCGACGAACTAAAAGCGGAAGAAAAAACATGGATTTTCAACAAAATGGCTTCATCATACATGTCCACTCTGGCCTCCCACAAGTGTCTATACTTCAACCCCGGTAATCCACTACTACGGTTAGGTAGTTGTTACACTTGGGCCTACCAAGTATGGACAGTGCTTGACGACTCAACAGTTCGTGTAAATGCTAATACATGTTTGTGCATGACTTCTTTTCAGTCGAGCAACCCTTATTATTTGATCGGCGTATTCGAATGTCAAGGCAAAGCCAAGCAACATTGGGAGATAGACTTACATGACTCCACCATTCACCACCCCGACTATACCATGGTCATGGATGCAATTACAATGCAATCGTCTAGTAAAGAATTGATTACTCTTTTTGGAAGTAATGGGGCTAGTACACAAAAATGGATGTTTTATGAATAA

Protein sequence

MKTHLVGRDGLCLDNDGAHRYNFPKTVPCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQYYTFVKTSECDELKAEEKTWIFNKMASSYMSTLASHKCLYFNPGNPLLRLGSCYTWAYQVWTVLDDSTVRVNANTCLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELITLFGSNGASTQKWMFYE

Homology

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BLAST of Sed0008003 vs. NCBI nr
Match: XP_022149256.1 (ribosome-inactivating protein SNAIf-like [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-43
Identity = 95/254 (37.40%), Postives = 128/254 (50.39%), Query Frame = 0


Query: 6   VGRDGLCLDNDGAHRYNFPKTVPCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQYY 65
           +G+DGLCLD+DG  RYNFPK VPC   E+ Q+W   DDGTI W NDRCLFP G +V   Y
Sbjct: 1   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 60

Query: 66  TFVKTSECDELKAEEKTWIFNK--------------MASSYMSTLA-------------- 125
             VKT  CDEL  +EKTW  N                  +Y  TL               
Sbjct: 61  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 120

Query: 126 --------------SHKCLY----FNPGNPLLRLGSCYTWAYQVWTVLDDSTVRVNANTC 185
                         ++KCL+       G   +      TW  QVW +  D ++R+ ++  
Sbjct: 121 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 180

Query: 186 LCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELIT 214
           LC+TS   + PY+ + VF+C+ KA+Q W ++     IHHP   +VMD I M S+  + + 
Sbjct: 181 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPM-SNQPQPVV 240

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BLAST of Sed0008003 vs. NCBI nr
Match: XP_004151509.2 (nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-20
Identity = 81/260 (31.15%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHRY-----NFP-KTVPCKRMEDTQLWTFPDDGTIRWHNDR-CLF 62
           THLVGRDGLCL+      Y     NFP + +PC   + TQLWT   DGTIR  NDR CL 
Sbjct: 39  THLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLA 98

Query: 63  PDGMEVLQYYTFVK---TSECDELKAEEKTWIFNK-----MASSYM--------STLASH 122
            D      +Y  +     SEC ++    K WI        +A S M         TL S 
Sbjct: 99  AD-----VFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSI 158

Query: 123 K--------------------------CLYFNPGNPLLRLGSCYTWA-YQVWTVLDDSTV 182
           K                          CL     +  + L  C T+  YQ W +  D T+
Sbjct: 159 KYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTI 218

Query: 183 RVNANTCLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQS 212
           R + N   C+TS Q+ +   ++   +C+ K +Q W ++  DSTI HP+  MV+D + +  
Sbjct: 219 RQHVNRNYCLTSEQNYDRSVVVS--KCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLD 278

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BLAST of Sed0008003 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 hypothetical protein Csa_010656 [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 4.1e-17
Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHR---YNFP-KTVPCKRMEDTQLWTFPDDGTIRWHNDR-CLFP- 62
           THLVGRDGLCL+    ++    NFP +  PC   + TQLWT   DGTIR  ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAE 98

Query: 63  ----------------------------DGMEVLQYYTFVKTSECDELKAE------EKT 122
                                       DG   L     V T + D +  +       ++
Sbjct: 99  VFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQS 158

Query: 123 WIFNKMASSYMSTL--ASHKCLYFNPGNPLLRLGSCYT-WAYQVWTVLDDSTVRVNANTC 182
           W   +  +S ++ +   ++ CL     +  + L  C T   YQ W +  D T+R + N  
Sbjct: 159 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKN 218

Query: 183 LCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSS-KELI 212
            C+TS Q    + ++   +C+ K +Q W +D  D TI HP+  MV+D  ++  S+   ++
Sbjct: 219 YCLTSDQDFGRFVVVS--KCEDKPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVL 278

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BLAST of Sed0008003 vs. NCBI nr
Match: XP_004146289.1 (nigrin b [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_010930 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-16
Identity = 74/257 (28.79%), Postives = 113/257 (43.97%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDG--AHRYNFP-KTVPC-KRMEDTQLWTFPDDGTIRWHNDRCLFPDG 62
           THLVGRDGLCL+         NFP +  PC ++ + TQLWT   D TIR  NDR      
Sbjct: 35  THLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSY 94

Query: 63  MEVLQYYTFVKTSECDELKAEEKTWIF----------------------------NKMAS 122
           + V  + T V  SEC +     K WI                             N  + 
Sbjct: 95  VSV-NFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQ 154

Query: 123 SYMSTLA-----------SHKCLYFNPGNPLLRLGSCYTW-AYQVWTVLDDSTVRVNANT 182
           S+ +T +            + CL     +  ++L  C +    Q W++  D T+R + N 
Sbjct: 155 SWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNR 214

Query: 183 CLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELI 215
             C+TS Q    +  + V +C+ K +Q W +   D+TI+HP+  MVMD +++      L 
Sbjct: 215 NYCLTSEQDFGRF--VAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLA 274

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BLAST of Sed0008003 vs. NCBI nr
Match: XP_038885951.1 (nigrin b-like [Benincasa hispida])

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-15
Identity = 77/257 (29.96%), Postives = 108/257 (42.02%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHRYNFPKTV--PCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGME 62
           THLVGRDGLCLD  G +  +   T   PC   ++ QLWT   DGTIR    +CL P+G E
Sbjct: 37  THLVGRDGLCLDVIGGYSDSHIPTQLWPC-GPQNNQLWTIQVDGTIRTMG-KCLVPNGHE 96

Query: 63  VLQYYTFVKTSECDELKAEEKTWIF--------------------NKMASSYMSTLAS-- 122
              Y       +C+++  ++KTW                         A + + T  S  
Sbjct: 97  PGSY---TMIDDCNKVDTQDKTWKLYPDGTLVHVWSGLVLTGQGTGPHAITTIETNTSAP 156

Query: 123 ---------------------HKCLYFNPGNPLLRLGSCY-TWAYQVWTVLDDSTVRVNA 182
                                H CL     N  + + SC      Q W V +D T+R N 
Sbjct: 157 TQSWGTADDGSPIVVAIVGLRHMCLQAQNDNVHVWMNSCVKNNRQQYWAVYNDGTIRTNY 216

Query: 183 NTCLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKE 214
           NT  C++S         IG+ +CQG  +Q W +   D TI +P   MVMD      + ++
Sbjct: 217 NTSFCLSS-TGKGLNDAIGLAKCQGLPQQRW-VAKEDGTILNPINNMVMDVKGSDPNLRK 276

[Close]

BLAST of Sed0008003 vs. ExPASy Swiss-Prot
Match: O22415 (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.3e-13
Identity = 67/251 (26.69%), Postives = 100/251 (39.84%), Query Frame = 0


Query: 7   GRDGLCLDNDGAHRY--NFPKTVPCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQY 66
           G DGLC+D    H    N  +  PC   E  QLWTF  DGTIRW   +CL          
Sbjct: 327 GWDGLCVDVRDGHYIDGNTVQLGPCGN-ECNQLWTFRTDGTIRWLG-KCLTTS------- 386

Query: 67  YTFVKTSECDELKAEEKTWIFN-----------------KMASSYMSTLASH-------- 126
            + V   +C+ +  E   W+ +                 + A     +L ++        
Sbjct: 387 -SSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLENNIHAARQGW 446

Query: 127 -----------------KCLYFNPGNPLLRLGSC-YTWAYQVWTVLDDSTVRVNANTCLC 186
                             CL  N  N  + L  C      Q W +  D T+RVN+N  LC
Sbjct: 447 TVGDVEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDGTIRVNSNRSLC 506

Query: 187 MTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELITLF 213
           +TS +   P  LI + +C+G   Q W  +  + TI +P+  +VMD      S +++I L+
Sbjct: 507 VTS-EDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLVMDVAQSNVSLRKII-LY 564

[Close]

BLAST of Sed0008003 vs. ExPASy Swiss-Prot
Match: Q41358 (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 66/251 (26.29%), Postives = 100/251 (39.84%), Query Frame = 0


Query: 7   GRDGLCLDNDGAHRY--NFPKTVPCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQY 66
           G DGLC+D    H    N  +  PC   E  QLWTF  DGTIRW   +CL          
Sbjct: 327 GWDGLCVDVRYGHYIDGNPVQLRPCGN-ECNQLWTFRTDGTIRWLG-KCLTAS------- 386

Query: 67  YTFVKTSECDELKAEEKTWIFN-----------------KMASSYMSTLASH-------- 126
            + V   +C+ +  E   W+ +                 + A     +L ++        
Sbjct: 387 -SSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLENNIHAARQGW 446

Query: 127 -----------------KCLYFNPGNPLLRLGSC-YTWAYQVWTVLDDSTVRVNANTCLC 186
                             CL  N  N  + L  C      Q W +  D T+RVN+N  LC
Sbjct: 447 TVGDVEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDGTIRVNSNRSLC 506

Query: 187 MTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELITLF 213
           +TS +   P  LI + +C+G   Q W  +  + TI +P+  ++MD      S +++I L+
Sbjct: 507 VTS-EDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLLMDVAQRDVSLRKII-LY 564

[Close]

BLAST of Sed0008003 vs. ExPASy Swiss-Prot
Match: P93543 (Ribosome-inactivating protein SNAI' OS=Sambucus nigra OX=4202 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-08
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 101 CLYFNPGNPLLRLGSCYTWAY----QVWTVLDDSTVRVNANTCLCMTSFQSSNPYYLIGV 160
           CL  NPGN  + LG C   +     Q W +  D T+RVN +  LC+TS   S+   +I +
Sbjct: 451 CLETNPGNNDVSLGDCSVKSASKVDQKWALYGDGTIRVNNDRSLCVTSEGKSSNEPII-I 510

Query: 161 FECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELITLFGSNGASTQKWM 213
            +C G A Q W  +  D TI +PD  +VM  +         I L   +G S Q+W+
Sbjct: 511 LKCLGWANQRWVFNT-DGTISNPDSKLVMH-VDQNDVPLRKIILSHPSGTSNQQWI 563

[Close]

BLAST of Sed0008003 vs. ExPASy Swiss-Prot
Match: Q9M654 (Ribosome-inactivating protein PMRIPm OS=Polygonatum multiflorum OX=45371 GN=RIPm PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 64/262 (24.43%), Postives = 96/262 (36.64%), Query Frame = 0


Query: 7   GRDGLCLD-NDGAHRYNFP-KTVPC-KRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQ 66
           GR G C+D  DG      P + + C    E  Q WTF  DGTIR    +C+   G +  +
Sbjct: 343 GRAGWCVDVKDGRDNDGNPIQVLSCGDGQERKQQWTFHRDGTIRSKLGKCMTAYGFKHGE 402

Query: 67  YYTFVKTSECDELKAEEKTW-------IFNKMASSYM--------STLASHKCLYFNPGN 126
           Y   V   +CD   A    W       I N ++   +        +TL   K ++     
Sbjct: 403 Y---VMIYDCDTAIAGANKWVVSIDGTITNPISGLVLTAPRGATGTTLLVEKNVH--AAR 462

Query: 127 PLLRLG----------------------------SCYTWAY----------QVWTVLDDS 186
              R+G                            S YT  +          Q W +  D 
Sbjct: 463 QCWRVGDDVEPIVTKIVGFQEKCLEANYLENTNVSRYTKVFLDDCVLDRQQQRWALYSDG 522

Query: 187 TVRVNANTCLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITM 213
           T+R +++  L +T+         I +  C+G   Q W  +  D TI +P+  +VMD    
Sbjct: 523 TIRADSDRSLRVTA-DGHRSLDSIIILACKGWGNQRWVFNT-DGTILNPNAKLVMDVKDS 582

[Close]

BLAST of Sed0008003 vs. ExPASy TrEMBL
Match: A0A6J1D7U5 (ribosome-inactivating protein SNAIf-like OS=Momordica charantia OX=3673 GN=LOC111017720 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 95/254 (37.40%), Postives = 128/254 (50.39%), Query Frame = 0


Query: 6   VGRDGLCLDNDGAHRYNFPKTVPCKRMEDTQLWTFPDDGTIRWHNDRCLFPDGMEVLQYY 65
           +G+DGLCLD+DG  RYNFPK VPC   E+ Q+W   DDGTI W NDRCLFP G +V   Y
Sbjct: 1   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 60

Query: 66  TFVKTSECDELKAEEKTWIFNK--------------MASSYMSTLA-------------- 125
             VKT  CDEL  +EKTW  N                  +Y  TL               
Sbjct: 61  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 120

Query: 126 --------------SHKCLY----FNPGNPLLRLGSCYTWAYQVWTVLDDSTVRVNANTC 185
                         ++KCL+       G   +      TW  QVW +  D ++R+ ++  
Sbjct: 121 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 180

Query: 186 LCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELIT 214
           LC+TS   + PY+ + VF+C+ KA+Q W ++     IHHP   +VMD I M S+  + + 
Sbjct: 181 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPM-SNQPQPVV 240

[Close]

BLAST of Sed0008003 vs. ExPASy TrEMBL
Match: A0A0A0LAC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20
Identity = 81/260 (31.15%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHRY-----NFP-KTVPCKRMEDTQLWTFPDDGTIRWHNDR-CLF 62
           THLVGRDGLCL+      Y     NFP + +PC   + TQLWT   DGTIR  NDR CL 
Sbjct: 39  THLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLA 98

Query: 63  PDGMEVLQYYTFVK---TSECDELKAEEKTWIFNK-----MASSYM--------STLASH 122
            D      +Y  +     SEC ++    K WI        +A S M         TL S 
Sbjct: 99  AD-----VFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSI 158

Query: 123 K--------------------------CLYFNPGNPLLRLGSCYTWA-YQVWTVLDDSTV 182
           K                          CL     +  + L  C T+  YQ W +  D T+
Sbjct: 159 KYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTI 218

Query: 183 RVNANTCLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQS 212
           R + N   C+TS Q+ +   ++   +C+ K +Q W ++  DSTI HP+  MV+D + +  
Sbjct: 219 RQHVNRNYCLTSEQNYDRSVVVS--KCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLD 278

[Close]

BLAST of Sed0008003 vs. ExPASy TrEMBL
Match: A0A0A0L9D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-17
Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHR---YNFP-KTVPCKRMEDTQLWTFPDDGTIRWHNDR-CLFP- 62
           THLVGRDGLCL+    ++    NFP +  PC   + TQLWT   DGTIR  ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAE 98

Query: 63  ----------------------------DGMEVLQYYTFVKTSECDELKAE------EKT 122
                                       DG   L     V T + D +  +       ++
Sbjct: 99  VFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQS 158

Query: 123 WIFNKMASSYMSTL--ASHKCLYFNPGNPLLRLGSCYT-WAYQVWTVLDDSTVRVNANTC 182
           W   +  +S ++ +   ++ CL     +  + L  C T   YQ W +  D T+R + N  
Sbjct: 159 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKN 218

Query: 183 LCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSS-KELI 212
            C+TS Q    + ++   +C+ K +Q W +D  D TI HP+  MV+D  ++  S+   ++
Sbjct: 219 YCLTSDQDFGRFVVVS--KCEDKPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVL 278

[Close]

BLAST of Sed0008003 vs. ExPASy TrEMBL
Match: Q9SLV9 (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-17
Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDGAHR---YNFP-KTVPCKRMEDTQLWTFPDDGTIRWHNDR-CLFP- 62
           THLVGRDGLCL+    ++    NFP +  PC   + TQLWT   DGTIR  ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAE 98

Query: 63  ----------------------------DGMEVLQYYTFVKTSECDELKAE------EKT 122
                                       DG   L     V T + D +  +       ++
Sbjct: 99  VFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQS 158

Query: 123 WIFNKMASSYMSTL--ASHKCLYFNPGNPLLRLGSCYT-WAYQVWTVLDDSTVRVNANTC 182
           W   +  +S ++ +   ++ CL     +  + L  C T   YQ W +  D T+R + N  
Sbjct: 159 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKN 218

Query: 183 LCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSS-KELI 212
            C+TS Q    + ++   +C+ K +Q W +D  D TI HP+  MV+D  ++  S+   ++
Sbjct: 219 YCLTSDQDFGRFVVVS--KCEDKPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVL 278

[Close]

BLAST of Sed0008003 vs. ExPASy TrEMBL
Match: A0A0A0L756 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.8e-17
Identity = 74/257 (28.79%), Postives = 113/257 (43.97%), Query Frame = 0


Query: 3   THLVGRDGLCLDNDG--AHRYNFP-KTVPC-KRMEDTQLWTFPDDGTIRWHNDRCLFPDG 62
           THLVGRDGLCL+         NFP +  PC ++ + TQLWT   D TIR  NDR      
Sbjct: 35  THLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSY 94

Query: 63  MEVLQYYTFVKTSECDELKAEEKTWIF----------------------------NKMAS 122
           + V  + T V  SEC +     K WI                             N  + 
Sbjct: 95  VSV-NFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQ 154

Query: 123 SYMSTLA-----------SHKCLYFNPGNPLLRLGSCYTW-AYQVWTVLDDSTVRVNANT 182
           S+ +T +            + CL     +  ++L  C +    Q W++  D T+R + N 
Sbjct: 155 SWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNR 214

Query: 183 CLCMTSFQSSNPYYLIGVFECQGKAKQHWEIDLHDSTIHHPDYTMVMDAITMQSSSKELI 215
             C+TS Q    +  + V +C+ K +Q W +   D+TI+HP+  MVMD +++      L 
Sbjct: 215 NYCLTSEQDFGRF--VAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLA 274

The following BLAST results are available for this feature:

BLAST of Sed0008003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149256.1	2.5e-43	37.40	ribosome-inactivating protein SNAIf-like [Momordica charantia]	[more]
XP_004151509.2	4.0e-20	31.15	nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis ...	[more]
NP_001274403.1	4.1e-17	28.06	uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 h...	[more]
XP_004146289.1	2.0e-16	28.79	nigrin b [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_010930 [Cucumis ...	[more]
XP_038885951.1	1.3e-15	29.96	nigrin b-like [Benincasa hispida]	[more]

BLAST of Sed0008003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22415	6.3e-13	26.69	Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=...	[more]
Q41358	3.1e-12	26.29	Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1	[more]
P93543	3.6e-08	34.48	Ribosome-inactivating protein SNAI' OS=Sambucus nigra OX=4202 PE=1 SV=1	[more]
Q9M654	1.9e-04	24.43	Ribosome-inactivating protein PMRIPm OS=Polygonatum multiflorum OX=45371 GN=RIPm...	[more]

BLAST of Sed0008003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7U5	1.2e-43	37.40	ribosome-inactivating protein SNAIf-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0LAC2	1.9e-20	31.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1	[more]
A0A0A0L9D1	2.0e-17	28.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1	[more]
Q9SLV9	2.0e-17	28.06	XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1	[more]
A0A0A0L756	9.8e-17	28.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1	[more]

BLAST of Sed0008003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	SMART	SM00458	ricin_3	coord: 90..214 e-value: 4.3E-8 score: 42.9
IPR000772	Ricin B, lectin domain	PFAM	PF00652	Ricin_B_lectin	coord: 95..211 e-value: 2.1E-13 score: 50.6
IPR000772	Ricin B, lectin domain	PROSITE	PS50231	RICIN_B_LECTIN	coord: 1..170 score: 20.974501
IPR000772	Ricin B, lectin domain	PROSITE	PS50231	RICIN_B_LECTIN	coord: 167..214 score: 10.1115
IPR000772	Ricin B, lectin domain	CDD	cd00161	RICIN	coord: 92..213 e-value: 1.01538E-9 score: 52.5078
None	No IPR available	GENE3D	2.80.10.50		coord: 1..98 e-value: 3.7E-10 score: 41.8
None	No IPR available	GENE3D	2.80.10.50		coord: 99..215 e-value: 4.8E-20 score: 73.5
IPR035992	Ricin B-like lectins	SUPERFAMILY	50370	Ricin B-like lectins	coord: 6..108
IPR035992	Ricin B-like lectins	SUPERFAMILY	50370	Ricin B-like lectins	coord: 94..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008003.1	Sed0008003.1	mRNA