Sed0007980 (gene) Chayote v1

Overview


Name	Sed0007980
Type	gene
Organism	Sechium edule (Chayote v1)
Description	G-patch domain-containing protein
Location	LG05: 1346023 .. 1348928 (-)
RNA-Seq Expression	Sed0007980
Synteny	Sed0007980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAACCGGCCCATGAATACTCTATAAATAAGCAGACGATTTCGAAGATAACTCAACAACGAAAGAAAAATTGATTCACTAAACCCAGACTTCCATTCCCAAAATCAAAGCAATATGTATTCAAATTCAACCATGAATCTTCCTTCCAAATCCTCATCTTCTTCAAAGCCAAATCTCATGTATTCCATCGGCCGCTGAAGAGAATGGCGCTTGATCCATCGGACGAATCTGATCTCAAGTTCGAGACCGCCGATTTGAAGATTTCGTCGGAGGATCGGCCGCGGTCTGTTTCTTGGGAGGTTCTTATGCTGGAAAAATTGAAAGCGGATCTGAGGAGGTTACCGGAGGATGCAGGGTTCGAGGAATTTGAGGTTGTTCCTGTTGAAAGATTTGGTGTTGCTTTGATGGAAAGCTATGGATGGCGGCAGGGTCGGGGAATTGGGAGAAACGCTAAGGAGGATGTTGAAGCTAAGGAATATAATGGAAGAATTGGTAAGCAAGGGCTAGGGTTTTTCAGCGACGTGCACAGGAATTGAAACAGAGATTCGGATTTGAAAAGTCAAAATTGGGGAGAAATTGGATCTTCATTGGCTTATGTTGATTCTTTTTGTAGCTAAGATTTTGTGGAAACTGTGTATTTACCAGGTACTTCTCTTCGTAGTTCGTGTGCTGCATATTTAGTCTTGTTTGTTTAACCTTTTTTATATGTTTCTTTCAGTTCTTTCTAAATTTGTGTTTAGGAGCTTTTATGTGGTATATACTATATGGAAGTTAATGTTTAGTTTACGATGTTAATGATGAGATGAGGAAACAATGGAAGAGTGTTGTTTAATGTTGGGAAAATTGCACAAACCTCCCATGAAGTTTAGTGTTTGTAACAATTAATCCTTTAGATTTTGAATTTGATCAATTTCCTGCCCTAAAGTTTGATAAGTGTTGCAATTAACACATTTTTAATAAATTTTATAGATTACCACATGTGTGGAGAGGGTAAATTTGTCCTATTTAAAAAATATTTTTTTTTGCATTTTTTAAAAGAAAGAAATATCAGTATGCCATAACAAAATTCTCCTCCCCAGCTCAATTGCAATCTGTGTTAGTAATTTGGGGACAATAGCATACCCAACCTGTATAACACAAGTATGTGTTATGGAGAACTTGTAATCAACAACTGTTAATAGATCAATATGCTTAAGAGGGGTTCATTTTTCATTTCATTTAATTAAAACAGTGTAACGATCTCCTTCTTCATTGACGGAATTAGAGAAATTAATGGTGGTGGCAAAAGAGGGGATTTGTTGAATACCCCGTTGTAAATTAGAGAGGGTAATCCAAAGGGGCGCGGCGGAATCGGGCGTGGCCGGTGGGAGGGGAGCGGCGGCAGCGGGCGAGGATAGAAATAGCGGTTTGGAAGTGGGAGACGACGGCGTTGGGATCAGAGTCCAGGTTAGAAAGGGGAGAGTGCGAGAGGATTGTGCTTAGCTTTTGGAGGGTGTAGAGGCTGGAGGTGGTGGCAGCTGGACCGCGGAGTCTTGGTCCCTTGCGGCGGAGAGTTGGGCGGTTGTGTAGCCGGTGACCAGGTCCACCGCCATGGAAGGAGGAGAGATAAGAGAGAAGGGTCAACATCAATTTTTTTCTTTCAAAAAATGCAAAAATTAATATTTTTTAAATATGACAAATTTACCCTCACCACACATGTGGAAATCTATAAAATTTATGAAAAAGGTGTAGCAACACTTATCAAATTTTAGGGGAAGAGATTATCAAATTCAAAGTTTAGGGGGTTAATTATTACAAACAGGGGAGGTTTGTGCAATTTTCCCTTTAATGTTTTATTGGTGTTCTTTTCTTCTTTTTTCTGGCATTTATGCACTAAATCTTTAGCTAAATTAGAGGGAGTTGGCTTGTATTGGGGCTGCACGAAATGAGTTAAATTCTCGTTATTGGGCGAAAATGATCTACCTTGCGTCTTCGAGAGGCCGCCTCAATGGTAGAAGCTTGGAGTCAAGGTATACTCCCTTGGAAGTCTCAAGTTTGAAACTACGAGTGAGCTTAGTGGTAAAACTCCTTATTGTTCCTGGGTCTAAGCCTTAAGATAGGCACTGATGTCCTTGAGTATGTAGTGGGGTGAAGGTTATAAAAAAATATATATGGATTTCATTTTTAGTTATTTTCCAACTCTTATTTCTATGAAGATTATTTGAAAACATTCATTAGAGCTTTTGATATTTGGTAATTCATGTTTCTATGAAGATGTTTAACTTAAGAAGATATTAATCTAAGAGGCTAGAACTGAGATTTTTAAACTTCGGGTCCAAATGAAAGATGGAGGTTAATTTAACCATTCAAACCACAATATAAAAAAAAAGTAATACTATGTTTGAACTTTAAATTCTCTAACTTGTTTCAGCGTGTCAATAGCTGTTGTCTGACTATAATCTTTAGATGATCTGTCTAGCTAATTGCTTTGGAGGGTTAGGATTTTATTCTTCTTCAATAAGATGATATCGGGGATTATGCAATTTGTTGTTACTTTCTGATCGATGATATATGATGCATCTTTCAGAGTATAGGATAAAAGCCTTGCTGAGATGTAATCTGGACAAGTCTTTTACATGAACGAGCTCTCTTACCCCCAGGATGCTTCTCAATGGTGAAATATGGTAATTATCATTTCACTTGTTTGCAACTTAGATTCTTTCAGTTCCAAGAATTATCTGGTGTGTTGTTGATAATGAATCGTGGAGGATATTGGGTCAAATCCCATGGGGGGTTTTAGGCTAATCATAATTGAATCCTGTGTGAATGTGACAAAATGTATATAGCTTAACGGTAATTGATATTATATACAATGTTTTAACTAAGAGATTATGAGTTCAATTAATGGTTGTCATTTAGAAATTAG

mRNA sequence

AAACAACCGGCCCATGAATACTCTATAAATAAGCAGACGATTTCGAAGATAACTCAACAACGAAAGAAAAATTGATTCACTAAACCCAGACTTCCATTCCCAAAATCAAAGCAATATGTATTCAAATTCAACCATGAATCTTCCTTCCAAATCCTCATCTTCTTCAAAGCCAAATCTCATGTATTCCATCGGCCGCTGAAGAGAATGGCGCTTGATCCATCGGACGAATCTGATCTCAAGTTCGAGACCGCCGATTTGAAGATTTCGTCGGAGGATCGGCCGCGGTCTGTTTCTTGGGAGGTTCTTATGCTGGAAAAATTGAAAGCGGATCTGAGGAGGTTACCGGAGGATGCAGGGTTCGAGGAATTTGAGGTTGTTCCTGTTGAAAGATTTGGTGTTGCTTTGATGGAAAGCTATGGATGGCGGCAGGGTCGGGGAATTGGGAGAAACGCTAAGGAGGATGTTGAAGCTAAGGAATATAATGGAAGAATTGGTAAGCAAGGGCTAGGGTTTTTCAGCGACGTGCACAGGAATTGAAACAGAGATTCGGATTTGAAAAGTCAAAATTGGGGAGAAATTGGATCTTCATTGGCTTATGTTGATTCTTTTTGTAGCTAAGATTTTGTGGAAACTGTGTATTTACCAGAGTATAGGATAAAAGCCTTGCTGAGATGTAATCTGGACAAGTCTTTTACATGAACGAGCTCTCTTACCCCCAGGATGCTTCTCAATGGTGAAATATGGTAATTATCATTTCACTTGTTTGCAACTTAGATTCTTTCAGTTCCAAGAATTATCTGGTGTGTTGTTGATAATGAATCGTGGAGGATATTGGGTCAAATCCCATGGGGGGTTTTAGGCTAATCATAATTGAATCCTGTGTGAATGTGACAAAATGTATATAGCTTAACGGTAATTGATATTATATACAATGTTTTAACTAAGAGATTATGAGTTCAATTAATGGTTGTCATTTAGAAATTAG

Coding sequence (CDS)

ATGGCGCTTGATCCATCGGACGAATCTGATCTCAAGTTCGAGACCGCCGATTTGAAGATTTCGTCGGAGGATCGGCCGCGGTCTGTTTCTTGGGAGGTTCTTATGCTGGAAAAATTGAAAGCGGATCTGAGGAGGTTACCGGAGGATGCAGGGTTCGAGGAATTTGAGGTTGTTCCTGTTGAAAGATTTGGTGTTGCTTTGATGGAAAGCTATGGATGGCGGCAGGGTCGGGGAATTGGGAGAAACGCTAAGGAGGATGTTGAAGCTAAGGAATATAATGGAAGAATTGGTAAGCAAGGGCTAGGGTTTTTCAGCGACGTGCACAGGAATTGA

Protein sequence

MALDPSDESDLKFETADLKISSEDRPRSVSWEVLMLEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRIGKQGLGFFSDVHRN

Homology

[Close]

BLAST of Sed0007980 vs. NCBI nr
Match: XP_038888213.1 (protein MOS2 [Benincasa hispida] >XP_038888214.1 protein MOS2 [Benincasa hispida])

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-28
Identity = 76/132 (57.58%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA---------------------------DLKISSEDRPRSVSWEVLM 62
           LD S ESDLKFE+A                           D   S+E+ PR    EV+M
Sbjct: 85  LDQSVESDLKFESASGLDPAEDSKMSYGLNVRQSVDGMKITDESKSAEEPPRPAPLEVIM 144

Query: 63  LEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGR 108
           LEK KADL RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R
Sbjct: 145 LEKFKADLERLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRR 204

[Close]

BLAST of Sed0007980 vs. NCBI nr
Match: XP_008460410.2 (PREDICTED: protein MOS2 [Cucumis melo] >XP_008460411.2 PREDICTED: protein MOS2 [Cucumis melo] >KAA0068104.1 protein MOS2 [Cucumis melo var. makuwa] >TYK26086.1 protein MOS2 [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 75/132 (56.82%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 3   LDPSDESDLKFETAD----------------------LKISSEDR-----PRSVSWEVLM 62
           LD SDESDLKFE+                        +KIS E +     PR    EV+M
Sbjct: 85  LDQSDESDLKFESVSGLDPLDDSKMSYGLNVRQSVDGMKISDESKSGEEPPRPAPLEVIM 144

Query: 63  LEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGR 108
           LEK KADL RLPED GFE+FE VPVE F  ALME YGWRQG+GIGRNAKEDV+ KEY+ R
Sbjct: 145 LEKFKADLERLPEDRGFEDFEEVPVESFAAALMEGYGWRQGKGIGRNAKEDVKVKEYSRR 204

[Close]

BLAST of Sed0007980 vs. NCBI nr
Match: XP_022967248.1 (protein MOS2-like [Cucurbita maxima] >XP_022967249.1 protein MOS2-like [Cucurbita maxima] >XP_022967250.1 protein MOS2-like [Cucurbita maxima])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 76/131 (58.02%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA-------DLKIS-------------------SEDRPRSVSWEVLML 62
           L  SDESDLKFE+A       D K+S                   S + PR    EV+ML
Sbjct: 84  LGQSDESDLKFESASGLDPPEDSKMSFGLNVRQSVDGMKSADDSESVEEPRPAPLEVVML 143

Query: 63  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 108
           EK KADL+RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R 
Sbjct: 144 EKFKADLKRLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRRT 203

[Close]

BLAST of Sed0007980 vs. NCBI nr
Match: KAG7011346.1 (Protein MOS2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 76/131 (58.02%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA-------DLKIS-------------------SEDRPRSVSWEVLML 62
           L  SDESDLKFE+A       D K+S                   S + PR    EV+ML
Sbjct: 84  LGQSDESDLKFESASGLDPPEDSKMSFGLNVRQSVDGIKSADDSKSVEEPRPAPLEVVML 143

Query: 63  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 108
           EK KADL+RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R 
Sbjct: 144 EKFKADLKRLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRRT 203

[Close]

BLAST of Sed0007980 vs. NCBI nr
Match: KAG6571605.1 (Protein MOS2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-28
Identity = 76/131 (58.02%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA-------DLKIS-------------------SEDRPRSVSWEVLML 62
           L  SDESDLKFE+A       D K+S                   S + PR    EV+ML
Sbjct: 84  LGQSDESDLKFESASGLDPPEDSKMSFGLNVRQSVDGIKSADDSKSVEEPRPAPLEVVML 143

Query: 63  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 108
           EK KADL+RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R 
Sbjct: 144 EKFKADLKRLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRRT 203

[Close]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot
Match: Q9C801 (Protein MOS2 OS=Arabidopsis thaliana OX=3702 GN=MOS2 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 23  EDRPRSVSWEVLMLEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRN 82
           E+R  S+  E LML+ L+ DL  L +D   E+FE VPV+ FG ALM  YGW+ G+GIG+N
Sbjct: 120 EERKVSMG-EQLMLQSLRRDLMSLADDPTLEDFESVPVDGFGAALMAGYGWKPGKGIGKN 179

Query: 83  AKEDVEAKEYNGRIGKQGLGFFSD 107
           AKEDVE KEY     K+GLGF  D
Sbjct: 180 AKEDVEIKEYKKWTAKEGLGFDPD 202

[Close]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot
Match: Q6NU07 (G-patch domain and KOW motifs-containing protein OS=Xenopus laevis OX=8355 GN=gpkow PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 37  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 96
           ++ K D+   P+ A   +++VVPV+++G+A++   GW++G GIGR  K+DV+  E   ++
Sbjct: 131 DREKVDVSLRPDSAEAADYDVVPVQQYGMAMLRGMGWKEGEGIGRTFKQDVKPLEQ--KL 190

Query: 97  GKQGLGFFSD 107
             +GLG  +D
Sbjct: 191 RPKGLGLGAD 198

[Close]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot
Match: Q90X38 (G-patch domain and KOW motifs-containing protein OS=Danio rerio OX=7955 GN=gpkow PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 37  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 96
           +K+  DLR  PE +   ++E VPVE +G+A+++  GW+Q  GIGR  K+DV+  E+  R 
Sbjct: 155 DKVNVDLR--PESSTEADYERVPVEAYGLAMLKGMGWKQEEGIGRTFKQDVKPIEHQLRP 214

Query: 97  GKQGLG 103
              GLG
Sbjct: 215 KGLGLG 218

[Close]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot
Match: Q4WP02 (Pre-mRNA-splicing factor spp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=spp2 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.6e-06
Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 0


Query: 17  DLKISSEDRPRSVSWEVLMLE--KLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWR 76
           DL I S  R    S+ V + E    + D+   PE A  +++  +PVE FG AL+   GW+
Sbjct: 216 DLVIESAKREVDESYPVRLDETGSFRVDVASRPEPATLDQYNAIPVEEFGAALLRGMGWK 275

Query: 77  QGRGIGRNAKEDVEAKEYNG---RIGKQGLGF 104
           +G+ IGR  K    A +Y     RI ++  GF
Sbjct: 276 EGQSIGR-GKYGTSATDYRSQSPRIPERRPGF 306

[Close]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot
Match: Q4P9X4 (Pre-mRNA-splicing factor SPP2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SPP2 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-05
Identity = 22/66 (33.33%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 37  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 96
           E L+ D+   PE    +++   P+++FG+AL+   GW++G G G+  K   +A E   R 
Sbjct: 204 ELLQHDIDSRPEAPTLDDYAATPIDQFGMALLRGMGWKEGMGAGKGGKGPQQAAEPRKRA 263

Query: 97  GKQGLG 103
              GLG
Sbjct: 264 ALLGLG 269

[Close]

BLAST of Sed0007980 vs. ExPASy TrEMBL
Match: A0A6J1HTX0 (protein MOS2-like OS=Cucurbita maxima OX=3661 GN=LOC111466834 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 76/131 (58.02%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA-------DLKIS-------------------SEDRPRSVSWEVLML 62
           L  SDESDLKFE+A       D K+S                   S + PR    EV+ML
Sbjct: 84  LGQSDESDLKFESASGLDPPEDSKMSFGLNVRQSVDGMKSADDSESVEEPRPAPLEVVML 143

Query: 63  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 108
           EK KADL+RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R 
Sbjct: 144 EKFKADLKRLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRRT 203

[Close]

BLAST of Sed0007980 vs. ExPASy TrEMBL
Match: A0A1S3CCE8 (protein MOS2 OS=Cucumis melo OX=3656 GN=LOC103499234 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 75/132 (56.82%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 3   LDPSDESDLKFETAD----------------------LKISSEDR-----PRSVSWEVLM 62
           LD SDESDLKFE+                        +KIS E +     PR    EV+M
Sbjct: 85  LDQSDESDLKFESVSGLDPLDDSKMSYGLNVRQSVDGMKISDESKSGEEPPRPAPLEVIM 144

Query: 63  LEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGR 108
           LEK KADL RLPED GFE+FE VPVE F  ALME YGWRQG+GIGRNAKEDV+ KEY+ R
Sbjct: 145 LEKFKADLERLPEDRGFEDFEEVPVESFAAALMEGYGWRQGKGIGRNAKEDVKVKEYSRR 204

[Close]

BLAST of Sed0007980 vs. ExPASy TrEMBL
Match: A0A6J1HGH8 (protein MOS2 OS=Cucurbita moschata OX=3662 GN=LOC111464081 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 76/131 (58.02%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETA-------DLKIS-------------------SEDRPRSVSWEVLML 62
           L  SDESDLKFE+A       D K+S                   S + PR    EV+ML
Sbjct: 84  LGQSDESDLKFESASGLDPPEDSKMSFGLNVRQSVDGIKSADDSKSVEEPRPAPLEVVML 143

Query: 63  EKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGRI 108
           EK KADL+RLPED GFE+FE VPVE F  ALME YGWRQGRGIGRNAKEDV+ KEYN R 
Sbjct: 144 EKFKADLKRLPEDRGFEDFEEVPVESFAAALMEGYGWRQGRGIGRNAKEDVKVKEYNRRT 203

[Close]

BLAST of Sed0007980 vs. ExPASy TrEMBL
Match: A0A5A7VL15 (Protein MOS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00490 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 75/132 (56.82%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 3   LDPSDESDLKFETAD----------------------LKISSEDR-----PRSVSWEVLM 62
           LD SDESDLKFE+                        +KIS E +     PR    EV+M
Sbjct: 85  LDQSDESDLKFESVSGLDPLDDSKMSYGLNVRQSVDGMKISDESKSGEEPPRPAPLEVIM 144

Query: 63  LEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGR 108
           LEK KADL RLPED GFE+FE VPVE F  ALME YGWRQG+GIGRNAKEDV+ KEY+ R
Sbjct: 145 LEKFKADLERLPEDRGFEDFEEVPVESFAAALMEGYGWRQGKGIGRNAKEDVKVKEYSRR 204

[Close]

BLAST of Sed0007980 vs. ExPASy TrEMBL
Match: A0A0A0LCH0 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G636410 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.1e-27
Identity = 73/132 (55.30%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 3   LDPSDESDLKFETAD----------------------LKISSEDR-----PRSVSWEVLM 62
           LD SDES LKFE+A                       +KIS E +     PR    EV+M
Sbjct: 107 LDQSDESHLKFESASGLDPLDDSKMSYGLNVRQSVDGMKISDESKSGEEPPRPAPLEVIM 166

Query: 63  LEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRNAKEDVEAKEYNGR 108
           LEK KADL RLPED GFE+FE VPVE F  ALM  YGWRQG+GIGRNAKEDV+ +EY+ R
Sbjct: 167 LEKFKADLERLPEDRGFEDFEEVPVESFAAALMNGYGWRQGKGIGRNAKEDVKVREYSRR 226

[Close]

BLAST of Sed0007980 vs. TAIR 10
Match: AT1G33520.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 23  EDRPRSVSWEVLMLEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRGIGRN 82
           E+R  S+  E LML+ L+ DL  L +D   E+FE VPV+ FG ALM  YGW+ G+GIG+N
Sbjct: 120 EERKVSMG-EQLMLQSLRRDLMSLADDPTLEDFESVPVDGFGAALMAGYGWKPGKGIGKN 179

Query: 83  AKEDVEAKEYNGRIGKQGLGFFSD 107
           AKEDVE KEY     K+GLGF  D
Sbjct: 180 AKEDVEIKEYKKWTAKEGLGFDPD 202

[Close]

BLAST of Sed0007980 vs. TAIR 10
Match: AT4G25020.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.1e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 19  KISSEDRPRSVSWEVLMLEKLKADLRRLPEDAGFEEFEVVPVERFGVALMESYGWRQGRG 78
           K+ + ++P  V  E ++L+ ++ DL  LP+    E+FE  PV+ FG AL+  YGW+ G+G
Sbjct: 100 KVENVEKPEPV--EKMLLKSMRTDLESLPDAPEKEDFESFPVDGFGEALLAGYGWKPGQG 159

Query: 79  IGRNAKEDVEAKEYNGRIGKQGLGF 104
           IG  AKEDV+  EY    G +G GF
Sbjct: 160 IGLKAKEDVKIVEYEKWSGNEGFGF 182

The following BLAST results are available for this feature:

BLAST of Sed0007980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888213.1	2.6e-28	57.58	protein MOS2 [Benincasa hispida] >XP_038888214.1 protein MOS2 [Benincasa hispida...	[more]
XP_008460410.2	4.5e-28	56.82	PREDICTED: protein MOS2 [Cucumis melo] >XP_008460411.2 PREDICTED: protein MOS2 [...	[more]
XP_022967248.1	4.5e-28	58.02	protein MOS2-like [Cucurbita maxima] >XP_022967249.1 protein MOS2-like [Cucurbit...	[more]
KAG7011346.1	4.5e-28	58.02	Protein MOS2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571605.1	4.5e-28	58.02	Protein MOS2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0007980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C801	1.7e-17	54.76	Protein MOS2 OS=Arabidopsis thaliana OX=3702 GN=MOS2 PE=2 SV=1	[more]
Q6NU07	1.2e-07	35.71	G-patch domain and KOW motifs-containing protein OS=Xenopus laevis OX=8355 GN=gp...	[more]
Q90X38	5.9e-07	42.42	G-patch domain and KOW motifs-containing protein OS=Danio rerio OX=7955 GN=gpkow...	[more]
Q4WP02	6.6e-06	34.78	Pre-mRNA-splicing factor spp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af...	[more]
Q4P9X4	2.5e-05	33.33	Pre-mRNA-splicing factor SPP2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237...	[more]

BLAST of Sed0007980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTX0	2.2e-28	58.02	protein MOS2-like OS=Cucurbita maxima OX=3661 GN=LOC111466834 PE=3 SV=1	[more]
A0A1S3CCE8	2.2e-28	56.82	protein MOS2 OS=Cucumis melo OX=3656 GN=LOC103499234 PE=3 SV=1	[more]
A0A6J1HGH8	2.2e-28	58.02	protein MOS2 OS=Cucurbita moschata OX=3662 GN=LOC111464081 PE=3 SV=1	[more]
A0A5A7VL15	2.2e-28	56.82	Protein MOS2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00490 ...	[more]
A0A0A0LCH0	4.1e-27	55.30	G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G636410 PE=...	[more]

BLAST of Sed0007980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33520.1	1.2e-18	54.76	D111/G-patch domain-containing protein	[more]
AT4G25020.1	5.1e-14	42.35	D111/G-patch domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 58..104 e-value: 5.9E-4 score: 29.1
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 60..106 score: 10.971428
IPR026822	Spp2/MOS2, G-patch domain	PFAM	PF12656	G-patch_2	coord: 47..103 e-value: 1.7E-15 score: 56.8
None	No IPR available	PANTHER	PTHR15818	G PATCH AND KOW-CONTAINING	coord: 27..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007980.1	Sed0007980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003676	nucleic acid binding