Sed0007976 (gene) Chayote v1

Overview


Name	Sed0007976
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	LG03: 6428211 .. 6429791 (+)
RNA-Seq Expression	Sed0007976
Synteny	Sed0007976

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGAAGCCCGGCGGCGCTGGTGCCGGAGGTAGGTTTAGATAACTTTCAGGGTCCGAAAGCTGTACTGTTCATTTGTTCTCGAAATTACCGTTTCTCTACCAAACCATAAACCCCCCATTTTCATCTCTTTCATCGTCGCCATAGCCATGAGCTCCACATTTGCTTCCATGTCTTCCTCTCTTTCATCCATCTTCTTCAATTTCAATTCATCTAAATCCAATCTCCGCTTCTCTGCTCCCCTTCCTCGCACTTCCCTCTCTCTTCATCGTTTTAGGGTTAGGGCTTCCTCCGCTCCCGTTGTTCAATGCCTCAAGAACTACGCCAAAGCTGCGATTATCATCGGTGCAGCCGCCACCATGGTTGGGAGATTCTCGCATTTCCCTGCCCGAGCGGAGTTGCCGGCGGCGGTAGCGGAGGAGGATCCGCGGACTGCTCACCAATCCTCGCCGTTGAATGATTTCCTCGAATCCAATTCCGAGGCTGTCGAGGCGCTCAAATCGCTTCTCCAGCAGAAGCTTGACAACGGCGAGGATGAAGAAGCGATGAAGATCTTGAGTCAATTGGTCTCTGCTCAGCCGTCGGTGACCGAGTGGAATTTCCTGATGGCTAGACTGCTCGGCGAAATGGGTAAATCGAAAGCCGCACGGGACGTTTTCGAAGAGATTTTGGCTGTGAATCCATTGTCTTACGAAGCTTTGTTCGAAAACGCGTTGTTGATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCTTGCGATTAGAACGGGCTCTGAGAATTGCTGAAGATGAGAACAAAGCGAAGGAGGCTAGGGATGTGAAGTTGATAATAGCTCAAATGCAGTTCTTGCAGAAGAATGTAGAGGAGGCCTTGACGAGCTATAAGGAATTGGTGAAGGAGGATCCTACTGATTTCAGGCCTTACTTTTGTCTAGGAATGATCTACAGTTTGCTTGATAAGAATGTAGAGGCCAAAGAGCAATTTGCTAAGTACAGGGAGCTTTCACCCAAGAAATTTGAGGTTGATGGGTACTTAAGAACTGCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTGAAGGTTCTTCACAGTCATCAGAGATGAGTAAGTGAATGTAAGGTGATACTTTTTTTTTTGTCTGACTTTTGTTATTTAGTTTGATCTGCCATCTGCTTGTAGTTTATTTGCGGGATGAAATAGGAGAGAATTGAATCTTATGAGGACAGGTTTTTTCCTTTCTTTAAGCATAAATTTTGCTGATTTATGCAGTTGTTTTGTTGGAATAAATGCAGAAAGGGGATGAGTAGTTTTTTTAACATGTTGCAATTTGATGACTTATGTACCTTAGAATCAATGTTTTAAAAGGCTAAAGGCGGCCTTGAGACTTTTTCTCTTGAAGAGGCGAGGCGTAAGTCTCGAGGCGATATGAGACGTAATACTTGCGTAAAAATACATAAAACAATACACCAACACAAAGATTGAGTTCTTTTGGAATAAAAAACAATTTCATTGATGAATGAAACATAAGTGAATTCTCTAAGTGAATACAAAAAAGAACTCGAAAAAGAGATGCTAGAG

mRNA sequence

GTCGGAAGCCCGGCGGCGCTGGTGCCGGAGGTAGGTTTAGATAACTTTCAGGGTCCGAAAGCTGTACTGTTCATTTGTTCTCGAAATTACCGTTTCTCTACCAAACCATAAACCCCCCATTTTCATCTCTTTCATCGTCGCCATAGCCATGAGCTCCACATTTGCTTCCATGTCTTCCTCTCTTTCATCCATCTTCTTCAATTTCAATTCATCTAAATCCAATCTCCGCTTCTCTGCTCCCCTTCCTCGCACTTCCCTCTCTCTTCATCGTTTTAGGGTTAGGGCTTCCTCCGCTCCCGTTGTTCAATGCCTCAAGAACTACGCCAAAGCTGCGATTATCATCGGTGCAGCCGCCACCATGGTTGGGAGATTCTCGCATTTCCCTGCCCGAGCGGAGTTGCCGGCGGCGGTAGCGGAGGAGGATCCGCGGACTGCTCACCAATCCTCGCCGTTGAATGATTTCCTCGAATCCAATTCCGAGGCTGTCGAGGCGCTCAAATCGCTTCTCCAGCAGAAGCTTGACAACGGCGAGGATGAAGAAGCGATGAAGATCTTGAGTCAATTGGTCTCTGCTCAGCCGTCGGTGACCGAGTGGAATTTCCTGATGGCTAGACTGCTCGGCGAAATGGGTAAATCGAAAGCCGCACGGGACGTTTTCGAAGAGATTTTGGCTGTGAATCCATTGTCTTACGAAGCTTTGTTCGAAAACGCGTTGTTGATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCTTGCGATTAGAACGGGCTCTGAGAATTGCTGAAGATGAGAACAAAGCGAAGGAGGCTAGGGATGTGAAGTTGATAATAGCTCAAATGCAGTTCTTGCAGAAGAATGTAGAGGAGGCCTTGACGAGCTATAAGGAATTGGTGAAGGAGGATCCTACTGATTTCAGGCCTTACTTTTGTCTAGGAATGATCTACAGTTTGCTTGATAAGAATGTAGAGGCCAAAGAGCAATTTGCTAAGTACAGGGAGCTTTCACCCAAGAAATTTGAGGTTGATGGGTACTTAAGAACTGCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTGAAGGTTCTTCACAGTCATCAGAGATGAGTAAGTGAATGTAAGGTGATACTTTTTTTTTTGTCTGACTTTTGTTATTTAGTTTGATCTGCCATCTGCTTGTAGTTTATTTGCGGGATGAAATAGGAGAGAATTGAATCTTATGAGGACAGGTTTTTTCCTTTCTTTAAGCATAAATTTTGCTGATTTATGCAGTTGTTTTGTTGGAATAAATGCAGAAAGGGGATGAGTAGTTTTTTTAACATGTTGCAATTTGATGACTTATGTACCTTAGAATCAATGTTTTAAAAGGCTAAAGGCGGCCTTGAGACTTTTTCTCTTGAAGAGGCGAGGCGTAAGTCTCGAGGCGATATGAGACGTAATACTTGCGTAAAAATACATAAAACAATACACCAACACAAAGATTGAGTTCTTTTGGAATAAAAAACAATTTCATTGATGAATGAAACATAAGTGAATTCTCTAAGTGAATACAAAAAAGAACTCGAAAAAGAGATGCTAGAG

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATGTCTTCCTCTCTTTCATCCATCTTCTTCAATTTCAATTCATCTAAATCCAATCTCCGCTTCTCTGCTCCCCTTCCTCGCACTTCCCTCTCTCTTCATCGTTTTAGGGTTAGGGCTTCCTCCGCTCCCGTTGTTCAATGCCTCAAGAACTACGCCAAAGCTGCGATTATCATCGGTGCAGCCGCCACCATGGTTGGGAGATTCTCGCATTTCCCTGCCCGAGCGGAGTTGCCGGCGGCGGTAGCGGAGGAGGATCCGCGGACTGCTCACCAATCCTCGCCGTTGAATGATTTCCTCGAATCCAATTCCGAGGCTGTCGAGGCGCTCAAATCGCTTCTCCAGCAGAAGCTTGACAACGGCGAGGATGAAGAAGCGATGAAGATCTTGAGTCAATTGGTCTCTGCTCAGCCGTCGGTGACCGAGTGGAATTTCCTGATGGCTAGACTGCTCGGCGAAATGGGTAAATCGAAAGCCGCACGGGACGTTTTCGAAGAGATTTTGGCTGTGAATCCATTGTCTTACGAAGCTTTGTTCGAAAACGCGTTGTTGATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCTTGCGATTAGAACGGGCTCTGAGAATTGCTGAAGATGAGAACAAAGCGAAGGAGGCTAGGGATGTGAAGTTGATAATAGCTCAAATGCAGTTCTTGCAGAAGAATGTAGAGGAGGCCTTGACGAGCTATAAGGAATTGGTGAAGGAGGATCCTACTGATTTCAGGCCTTACTTTTGTCTAGGAATGATCTACAGTTTGCTTGATAAGAATGTAGAGGCCAAAGAGCAATTTGCTAAGTACAGGGAGCTTTCACCCAAGAAATTTGAGGTTGATGGGTACTTAAGAACTGCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTGA

Protein sequence

MSSTFASMSSSLSSIFFNFNSSKSNLRFSAPLPRTSLSLHRFRVRASSAPVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPRTAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN

Homology

[Close]

BLAST of Sed0007976 vs. NCBI nr
Match: XP_038876236.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 472.2 bits (1214), Expect = 3.3e-129
Identity = 268/340 (78.82%), Postives = 291/340 (85.59%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA 60
           MSSTFAS+    SSSLSSI FNFN+SKS       NLRF+APL R S+S+H FRVRASS 
Sbjct: 1   MSSTFASISSPTSSSLSSI-FNFNASKSKMVSLPNNLRFAAPLSRNSVSVHPFRVRASSV 60

Query: 61  ------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVA------EEDPRTAH 120
                 PVVQCL+NYA+AAI+IGAAATMVG+FSH PARAE PAAVA      EED R A 
Sbjct: 61  PVSRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDQRIAE 120

Query: 121 -------QSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWN 180
                  QSSPLNDFLESNSEA+EALKSLLQQKL+NGEDEEA+KIL QLVSAQPSVTEW 
Sbjct: 121 DSDQEGKQSSPLNDFLESNSEAIEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWK 180

Query: 181 FLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERALRI 240
           FLMARLLGEMGK++ AR+VFEEILAVNPLS+EALFENALLMDRCGEGEAVL RLE AL+I
Sbjct: 181 FLMARLLGEMGKTENAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALKI 240

Query: 241 AEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLLDK 300
           AE+ENK KEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIYSLLDK
Sbjct: 241 AENENKVKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDK 300

Query: 301 NVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           N+EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 NMEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 339

[Close]

BLAST of Sed0007976 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 470.7 bits (1210), Expect = 9.7e-129
Identity = 268/341 (78.59%), Postives = 287/341 (84.16%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSK------SNLRFSAPLPRTSLSLHRFRVRASSA- 60
           MSSTFA+M    SSSLSSI F+FN+SK       NLRF+APL R S+ + RFRVRASSA 
Sbjct: 1   MSSTFAAMSSPSSSSLSSI-FHFNASKPKPVSPPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  --------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEE---------- 120
                   PVVQCL+NYA+AAI+IGAAATMVG+FSH PARAE PAAVAEE          
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 ---DPRTAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTE 180
                R   QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERAL 240
           W FLMARLLGEMGK++ ARDVFEEILAVNPLS+EALFENALLMDRCGEGEAVL RLE AL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLL 300
           RIAEDENKAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP DFRPYFC GMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDE 310
           DKNVEA+EQF+KYRELSPKKFEVDGYLRT LSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of Sed0007976 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 4.5e-126
Identity = 266/344 (77.33%), Postives = 283/344 (82.27%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA 60
           MSSTFASM    SSSLSSI FNFN S S       NLRF+APL R S+S+H FRVRASS 
Sbjct: 1   MSSTFASMSSPSSSSLSSI-FNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSV 60

Query: 61  -------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR-------- 120
                  PVVQCL+NYAKAAI+IGAAATMVG+FS+ PARAE PAAVAEE  R        
Sbjct: 61  PVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDK 120

Query: 121 --------TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSV 180
                      QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSA PSV
Sbjct: 121 RIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSV 180

Query: 181 TEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLER 240
           TEW FLMARLL EMGK++ AR+VFEEILAV+PLSYEALFENALLMDRCGEGEAVL RLE 
Sbjct: 181 TEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEE 240

Query: 241 ALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYS 300
           ALRIAE E KAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIYS
Sbjct: 241 ALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYS 300

Query: 301 LLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           LLDKN EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 LLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of Sed0007976 vs. NCBI nr
Match: XP_004149472.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical protein Csa_017797 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-125
Identity = 261/345 (75.65%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSSTFASMSSSLSSIF---FNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA- 60
           MSSTFAS+SS  SS F   FNFN S S       NLRF+APL R+S+S+H FRVRASS  
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  --------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPRT------ 120
                   PVV CL+NYAKAAI+IGAAATMVG+FS+ PARAE  A VAEE  R       
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 ----------AHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPS 180
                       QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLE 240
           VTEW FLMARLLGEMGK++ AR+VFEEILAVNPLS+EALFENALLMDRCGEGEAV+ RLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 RALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIY 300
            ALRIAE+ENKAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           SLLDKN+EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]

BLAST of Sed0007976 vs. NCBI nr
Match: TYJ97188.1 (protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-125
Identity = 265/344 (77.03%), Postives = 282/344 (81.98%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA 60
           MSSTFASM    SSSLSSI FNFN S S       NLRF+APL R S+S+H FRVRASS 
Sbjct: 1   MSSTFASMSSPSSSSLSSI-FNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSV 60

Query: 61  -------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR-------- 120
                  PVVQCL+NYAKAAI+IGAAATMVG+FS+ PARAE PA VAEE  R        
Sbjct: 61  PVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDK 120

Query: 121 --------TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSV 180
                      QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSA PSV
Sbjct: 121 RIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSV 180

Query: 181 TEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLER 240
           TEW FLMARLL EMGK++ AR+VFEEILAV+PLSYEALFENALLMDRCGEGEAVL RLE 
Sbjct: 181 TEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEE 240

Query: 241 ALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYS 300
           ALRIAE E KAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIYS
Sbjct: 241 ALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYS 300

Query: 301 LLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           LLDKN EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 LLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of Sed0007976 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.1e-89
Identity = 186/312 (59.62%), Postives = 226/312 (72.44%), Query Frame = 0


Query: 7   SMSSSLSSIFFNFNSSKSNLRFSAPLPRTSLSLHRFRVRASSAPVVQC----LKNYAKAA 66
           S  S+ SS+  +F + K+       +PR  L   R R  ++      C     K++AK+A
Sbjct: 3   SSLSASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSA 62

Query: 67  IIIGAAATMVGRFSHFPARAELPAAVAEEDPRTAHQS-----SPLNDFLESNSEAVEALK 126
           I+IGAA +M G+FS  P +AE P    E+      +      +PL++ L+S  EAVE L+
Sbjct: 63  ILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLR 122

Query: 127 SLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVN 186
           SLLQQKL+ GEDEEA+K+L +LV+AQP  TEW FLMARLLGEMG+ + AR +FEEIL  N
Sbjct: 123 SLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRN 182

Query: 187 PLSYEALFENALLMDRCGEGEAVLLRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNV 246
           PLS+EALFENALLMDR GEG AVL RLE AL +AE E   KEARDV+LIIAQ+ FLQKNV
Sbjct: 183 PLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNV 242

Query: 247 EEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYLRT 306
           +EAL SY++L KEDP DFRPYFC GMIYSLLDKNVEAKEQFAKYRELSPKKFEV+GYLRT
Sbjct: 243 DEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRT 302

Query: 307 ALSRMKIFGSDE 310
            LS+MK+FG  E
Sbjct: 303 PLSKMKLFGGSE 314

[Close]

BLAST of Sed0007976 vs. ExPASy TrEMBL
Match: A0A6J1CXB6 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015681 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.7e-129
Identity = 268/341 (78.59%), Postives = 287/341 (84.16%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSK------SNLRFSAPLPRTSLSLHRFRVRASSA- 60
           MSSTFA+M    SSSLSSI F+FN+SK       NLRF+APL R S+ + RFRVRASSA 
Sbjct: 1   MSSTFAAMSSPSSSSLSSI-FHFNASKPKPVSPPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  --------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEE---------- 120
                   PVVQCL+NYA+AAI+IGAAATMVG+FSH PARAE PAAVAEE          
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 ---DPRTAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTE 180
                R   QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERAL 240
           W FLMARLLGEMGK++ ARDVFEEILAVNPLS+EALFENALLMDRCGEGEAVL RLE AL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLL 300
           RIAEDENKAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP DFRPYFC GMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDE 310
           DKNVEA+EQF+KYRELSPKKFEVDGYLRT LSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of Sed0007976 vs. ExPASy TrEMBL
Match: A0A1S3CRV7 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.2e-126
Identity = 266/344 (77.33%), Postives = 283/344 (82.27%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA 60
           MSSTFASM    SSSLSSI FNFN S S       NLRF+APL R S+S+H FRVRASS 
Sbjct: 1   MSSTFASMSSPSSSSLSSI-FNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSV 60

Query: 61  -------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR-------- 120
                  PVVQCL+NYAKAAI+IGAAATMVG+FS+ PARAE PAAVAEE  R        
Sbjct: 61  PVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDK 120

Query: 121 --------TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSV 180
                      QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSA PSV
Sbjct: 121 RIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSV 180

Query: 181 TEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLER 240
           TEW FLMARLL EMGK++ AR+VFEEILAV+PLSYEALFENALLMDRCGEGEAVL RLE 
Sbjct: 181 TEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEE 240

Query: 241 ALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYS 300
           ALRIAE E KAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIYS
Sbjct: 241 ALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYS 300

Query: 301 LLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           LLDKN EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 LLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of Sed0007976 vs. ExPASy TrEMBL
Match: A0A5D3BG83 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00680 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 6.4e-126
Identity = 265/344 (77.03%), Postives = 282/344 (81.98%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSSKS-------NLRFSAPLPRTSLSLHRFRVRASSA 60
           MSSTFASM    SSSLSSI FNFN S S       NLRF+APL R S+S+H FRVRASS 
Sbjct: 1   MSSTFASMSSPSSSSLSSI-FNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSV 60

Query: 61  -------PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR-------- 120
                  PVVQCL+NYAKAAI+IGAAATMVG+FS+ PARAE PA VAEE  R        
Sbjct: 61  PVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDK 120

Query: 121 --------TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSV 180
                      QSSPLNDFLESNSEAVEALKSLLQQKL+NGEDEEA+KIL QLVSA PSV
Sbjct: 121 RIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSV 180

Query: 181 TEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLER 240
           TEW FLMARLL EMGK++ AR+VFEEILAV+PLSYEALFENALLMDRCGEGEAVL RLE 
Sbjct: 181 TEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEE 240

Query: 241 ALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYS 300
           ALRIAE E KAKEARDVKLI+AQ+QFLQKNVEEAL SYKELVKEDP+DFRPYFC GMIYS
Sbjct: 241 ALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYS 300

Query: 301 LLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           LLDKN EAK+QFAKYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 LLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of Sed0007976 vs. ExPASy TrEMBL
Match: A0A6J1GYL7 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458452 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.7e-123
Identity = 254/336 (75.60%), Postives = 279/336 (83.04%), Query Frame = 0


Query: 1   MSSTFASM----SSSLSSIFFNFNSS---KSNLRFSAPLPRTSLSLHRFRVRASSA---- 60
           MS TFASM    SSSLSSIF +  S      NLRF+AP+ RTS+S+HRFRVRASS     
Sbjct: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFAAPISRTSVSVHRFRVRASSVPVSR 60

Query: 61  --PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR------------- 120
             PVVQC KNYA+AAI+IGAAATMVG+FSH PARAE P  V EE  R             
Sbjct: 61  NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVEDSDQ 120

Query: 121 TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLMA 180
              QSSPLNDFLESNSEAVEALKSLLQQKL+N EDEEA+KIL+QLVSAQ SVTEW FL A
Sbjct: 121 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 180

Query: 181 RLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERALRIAEDE 240
           RLLGEMGK++ AR+VFEEILA NPLS+EALFENALLMDRCGEGEAVLLRLE+ALRIAE+E
Sbjct: 181 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENE 240

Query: 241 NKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEA 300
            KAKEARDV+LI+AQ+QFLQKNVE ALTSYKEL+KEDP+DFRPYFC GMIYSLLDKN EA
Sbjct: 241 KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEA 300

Query: 301 KEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           ++QF+KYRELSPKKFEVDGYLRT LSRMKIFGSDEN
Sbjct: 301 RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]

BLAST of Sed0007976 vs. ExPASy TrEMBL
Match: A0A6J1JQU3 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.0e-123
Identity = 255/337 (75.67%), Postives = 281/337 (83.38%), Query Frame = 0


Query: 1   MSSTFASMS--SSLSSIFFNFNSSKS------NLRFSAPLPRTSLSLHRFRVRASSA--- 60
           MS TFASMS  SS SS+   F+SSKS      NLRF+APL RTS+S++RFRVRASS    
Sbjct: 1   MSFTFASMSSPSSSSSLSSIFSSSKSKPVPPPNLRFAAPLSRTSVSVYRFRVRASSVPVS 60

Query: 61  ---PVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELPAAVAEEDPR------------ 120
              PVVQC KNYA+AAI+IGAAATMVG+FSH PARAE P AV EE  R            
Sbjct: 61  RNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSD 120

Query: 121 -TAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLM 180
               QSSPLNDFLESNSEAVEALKSLLQQKL+N EDEEA+KIL+QLVSAQ SVTEW FL 
Sbjct: 121 QDRQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLK 180

Query: 181 ARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLERALRIAED 240
           ARLLGEMGK++ AR+VFEEILA NPLS+EALFENALLMDRCGEGEAVLLRLE+ALRIAE+
Sbjct: 181 ARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAEN 240

Query: 241 ENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVE 300
           E KAKEARDV+LI+AQ+QFLQKNVE ALTSYKEL+KEDP+DFRPYFC GMIYSLLDKN E
Sbjct: 241 EKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEE 300

Query: 301 AKEQFAKYRELSPKKFEVDGYLRTALSRMKIFGSDEN 311
           A++QF KYRELSPKK+EVDGYLRT LSRMKIFGSDEN
Sbjct: 301 ARQQFGKYRELSPKKYEVDGYLRTPLSRMKIFGSDEN 337

[Close]

BLAST of Sed0007976 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-90
Identity = 186/312 (59.62%), Postives = 226/312 (72.44%), Query Frame = 0


Query: 7   SMSSSLSSIFFNFNSSKSNLRFSAPLPRTSLSLHRFRVRASSAPVVQC----LKNYAKAA 66
           S  S+ SS+  +F + K+       +PR  L   R R  ++      C     K++AK+A
Sbjct: 3   SSLSASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSA 62

Query: 67  IIIGAAATMVGRFSHFPARAELPAAVAEEDPRTAHQS-----SPLNDFLESNSEAVEALK 126
           I+IGAA +M G+FS  P +AE P    E+      +      +PL++ L+S  EAVE L+
Sbjct: 63  ILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLR 122

Query: 127 SLLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVN 186
           SLLQQKL+ GEDEEA+K+L +LV+AQP  TEW FLMARLLGEMG+ + AR +FEEIL  N
Sbjct: 123 SLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRN 182

Query: 187 PLSYEALFENALLMDRCGEGEAVLLRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNV 246
           PLS+EALFENALLMDR GEG AVL RLE AL +AE E   KEARDV+LIIAQ+ FLQKNV
Sbjct: 183 PLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNV 242

Query: 247 EEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYLRT 306
           +EAL SY++L KEDP DFRPYFC GMIYSLLDKNVEAKEQFAKYRELSPKKFEV+GYLRT
Sbjct: 243 DEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRT 302

Query: 307 ALSRMKIFGSDE 310
            LS+MK+FG  E
Sbjct: 303 PLSKMKLFGGSE 314

[Close]

BLAST of Sed0007976 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 90/270 (33.33%), Postives = 146/270 (54.07%), Query Frame = 0


Query: 28  FSAPLP--RTSLSLHRFRVRASSAPVVQCLKNYAKAAIIIGAAATMVGRFSHFPARAELP 87
           F+ PLP  R+S SL       SS   VQ L    KAAI++  +   +G  S  PA A LP
Sbjct: 56  FAPPLPLIRSSTSL------LSSKDFVQMLAR--KAAILLVGSFVFLGFCSSKPALA-LP 115

Query: 88  AAVAEEDPRTAHQSSPLNDFLESNSEAVEALKSLLQQKLDNGEDEEAMKILSQLVSAQPS 147
            A          +       LE+  E +EA+K+++ +K+  G++E+A+K + +L+  +P 
Sbjct: 116 TATVVSQAELEDEKM-FEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPH 175

Query: 148 VTEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFENALLMDRCGEGEAVLLRLE 207
             EW  L A     MG+   A+ ++++IL   PL   AL   A++M +  +  +V   L 
Sbjct: 176 EVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLI 235

Query: 208 RALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTSYKELVKEDPTDFRPYFCLGMIY 267
            A+ +A   N+  E R+++++I QM  ++   EE L  ++++V ++P DFRPY C G++Y
Sbjct: 236 EAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVY 295

Query: 268 SLLDKNVEAKEQFAKYRELSPKKFEVDGYL 296
           SL+DK  EA +QF  Y  L P +F   G+L
Sbjct: 296 SLMDKKEEAAQQFEIYWSLVPGEFPQKGFL 314

[Close]

BLAST of Sed0007976 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-30
Identity = 97/308 (31.49%), Postives = 156/308 (50.65%), Query Frame = 0


Query: 12  LSSIFFNFNSSKSNLRFS-APLPRTSLSLHRFRVRASSAPVVQCLKNYAKAAII--IGAA 71
           LS   F+ +  K    FS   LPR++ S     ++ASS+       +  K+  +    AA
Sbjct: 16  LSFTHFSSSFPKKPSSFSLRSLPRSTSSFKCISIKASSSKSQDSKLSILKSTCVSFTAAA 75

Query: 72  ATMVGRFSHFPARAELPAAVAEEDPRTAHQSS----------PLNDFLESNSEAVEALKS 131
           A  +      P+ A      A     +  QS+           L ++L S+ + VEAL+S
Sbjct: 76  ALFLVNLQLKPSPAIAAPVAATPLMESLKQSNGNVSFEEEERSLEEYLASHPDDVEALRS 135

Query: 132 LLQQKLDNGEDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVNP 191
           L++ ++ + +  EA++++ +L+  +P   EW  L A +    G  ++A+  FEEIL  +P
Sbjct: 136 LMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFEEILVKDP 195

Query: 192 LSYEALFENALLMDRCGEG-EAVLLRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNV 251
           L  EA     +     G+   AV  R+E A+   + E   K+ RD KL++AQ++ ++   
Sbjct: 196 LRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKH 255

Query: 252 EEALTSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYLRT 306
            EAL  Y+ELVKE+P DFRPY C G+IY++L K  EA++QF K+R L PK      Y   
Sbjct: 256 NEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMD 315

[Close]

BLAST of Sed0007976 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-29
Identity = 87/247 (35.22%), Postives = 135/247 (54.66%), Query Frame = 0


Query: 68  AATMVGRFSHFPARAELPAAVAEEDPRTAHQSSPLNDFLESNSEAVEALKSLLQQKLDNG 127
           AAT+V         A+L +      P+   + + L   L  N   VEAL+SL++ K    
Sbjct: 84  AATLVSPPPPPSTAADLTSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTK 143

Query: 128 EDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEALFEN 187
             + A++IL++L+  QP   EW  L A++    G   +A   FEE+L+ +P   EA   +
Sbjct: 144 NIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAY--H 203

Query: 188 ALLMDRCGEGEAVL----LRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEALTS 247
            L+M    E E+ L     R+  A+   + ENK K+ RD  L+IAQ++ ++ N  EAL  
Sbjct: 204 GLVM-AYSESESKLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQIRVIKGNPIEALRV 263

Query: 248 YKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYL-RTALSRM 307
           Y+ELVK++P DFRPY C G+IY+L+ K  EA++QFA++R L P+      YL    L+  
Sbjct: 264 YQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTN 323

Query: 308 KIFGSDE 310
           K+F  ++
Sbjct: 324 KLFAKNQ 326

[Close]

BLAST of Sed0007976 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-29
Identity = 95/304 (31.25%), Postives = 157/304 (51.64%), Query Frame = 0


Query: 13  SSIFFNFNSSKSNLRFSAPLPRTSL--SLHRFRVRASSAPVVQCLKNYAKAAIIIGAAAT 72
           SS  F  N  KS+++  + L   S+  S  +F+   +  P     + +    I +  AA 
Sbjct: 22  SSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTPFRLFKSTCITLTTAAA 81

Query: 73  MVGRFSHFPAR------AELPAAVAEEDPRTAHQSSPLNDFLESNSEAVEALKSLLQQKL 132
           ++    H  +       A  P+  ++E+     +   L++ L ++   V+AL+SL++ K+
Sbjct: 82  LLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEERALDEHLITHPSDVDALRSLMEVKI 141

Query: 133 DNGEDEEAMKILSQLVSAQPSVTEWNFLMARLLGEMGKSKAARDVFEEILAVNPLSYEAL 192
            + +  EA++++ +L+  +P   EW  L A +    G    A+  FEEILA +PL  EA 
Sbjct: 142 KSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAY 201

Query: 193 FENALLMDRCGEG---EAVLLRLERALRIAEDENKAKEARDVKLIIAQMQFLQKNVEEAL 252
             + LLM     G   + V  R+E A+   + EN   + RD KL++AQ++ ++    EAL
Sbjct: 202 --HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEAL 261

Query: 253 TSYKELVKEDPTDFRPYFCLGMIYSLLDKNVEAKEQFAKYRELSPKKFEVDGYLRTALSR 306
             Y+ELVKE+P DFRPY C G+IY+LL K  +A+EQF  +R+L PK      Y    +  
Sbjct: 262 KLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIA 321

The following BLAST results are available for this feature:

BLAST of Sed0007976 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876236.1	3.3e-129	78.82	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022146470.1	9.7e-129	78.59	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]
XP_008466719.1	4.5e-126	77.33	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo]	[more]
XP_004149472.1	1.0e-125	75.65	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical...	[more]
TYJ97188.1	1.3e-125	77.03	protein SLOW GREEN 1 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0007976 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	2.1e-89	59.62	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of Sed0007976 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB6	4.7e-129	78.59	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110156...	[more]
A0A1S3CRV7	2.2e-126	77.33	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4...	[more]
A0A5D3BG83	6.4e-126	77.03	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174...	[more]
A0A6J1GYL7	1.7e-123	75.60	protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145845...	[more]
A0A6J1JQU3	5.0e-123	75.67	protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 ...	[more]

BLAST of Sed0007976 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18420.1	1.5e-90	59.62	Protein prenylyltransferase superfamily protein	[more]
AT4G39470.1	1.3e-30	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G37400.1	3.8e-30	31.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	2.5e-29	35.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	3.2e-29	31.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..250
None	No IPR available	COILS	Coil	Coil	coord: 201..221
None	No IPR available	PANTHER	PTHR26312:SF138	PROTEIN SLOW GREEN 1, CHLOROPLASTIC	coord: 75..309
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 75..309
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 221..254 e-value: 13.0 score: 14.1 coord: 147..180 e-value: 93.0 score: 6.4 coord: 255..288 e-value: 48.0 score: 8.9
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 225..253 e-value: 0.082 score: 13.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 224..303 e-value: 1.5E-9 score: 39.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 52..223 e-value: 1.5E-12 score: 49.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 108..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007976.1	Sed0007976.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity