Sed0007972 (gene) Chayote v1

Overview


Name	Sed0007972
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein CRABS CLAW
Location	LG07: 35501300 .. 35503495 (+)
RNA-Seq Expression	Sed0007972
Synteny	Sed0007972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCTGAAGATAAATCTTCCATGGATTTGGTCCAACCTTCTGAGCATCTCTGTTATGTGAAATGCAACTTTTGCAACACTGTTCTTGCGGTAACCCCTCTTGCTTTTTCAATCAATTTGACATGCAAAATATATATATAATAGATTCCTTGGATACCCTTTGCTCATAACTGATTGTAATGGTAAAAAATAGAATAATGATGAAAGAGAACTTAGAATAGCAAATTACTCTTTGTCCATAACTGTAAAGTTTATGTTTGAGATTGACATACATATATGTTGGGAGTTTAAGGTTAAATTTTGACATTTTTTTTTGTTTGTCCCATGTTGGATTTGGAAGGTTGGGATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGCAGTAATCTCTCCTTTCTGAGCACAAGGCCCCCTTTACAAGGCCAATGCATTGACCATCCTTTCAGTTTTCAGGTTAACTATAATTTTAATGATATTAATTAGGATTTTTCTAATGGTCACAAACGAGAATTGATTAATGTAACATGAGCTTGAGTTATTCTTGTAACAACCAGTCTCAGATTGGCTTCCCAAATGATCTTCGGAAGGGCGCATCGACATCGTCCTCATCGATATCGTCTTCAATGGCGAACGAGCCCCCCTCTCCAAATTTTGTTGTTAAACGTATGTCCTTTTTTCTCTTTTTTTTTTTTTTTTGTTTTTTTTGAGACAGTCCTTTTTTCTCTTATATTACTACTCTATTAACCGAAATTGAAGATTAAATTTATTATAATTTATTGGCTTGAACTTTTGGGTAGGGAAATTAGTGGAATTGAATTTAAATTCTTAAGGCCTCGCGTTTGACATTTTGTTTTTTGTTTTTGTTTTTTTTCTAATTTTTCATTTTTTATTTTTGGTTAAAATAAAAATCGTATATATTTTAAAACTCAATTTAATTTTATATTTTTAAAAATTGAAAACAAAAAAACATGGTTGATAACTATTTTTTGTTTTCAAATATCACAATTTTGTTTTGATTTTTTTAATTTTTTACTAGTTATTCTTGTTCTTTTTATACTTTTTTAAAAACAAAAACAAAAACTTGTTTTTAAAAGTTTTTTTTAATACCCTCAATGTTTTTAAAATTTTAAAAACAAAAACTAAAATTGATTATCAAACAAACCCTGTTTTTAAAAAAGTAAAAACAAAAAACCAAAAAATGAAATGGTTATCAAACGTGACCTAAGGTTCTCTACCATAATCATTTTATTTTATTTTATTTTTGAATAAAATTTATTTTTATCAAATTGTTTCATGATCTTCATTTAAGAAAGTATTTGAACTCTAACAAAATTTCATAAACCAAAATAAGTTTTTAAAAACAATTTTTTAGGTTTTAAATTTTAGTTTGGTTCTTAAAAATATAAATTTTAGTTTTATATTTAAAAATATAGGTAAAATTAGATATGAAAGTAACAAAAATACTTAAATTAGATTAGTTACAATAGGCTTCAATTTCAAAAAAGGAAAAACAAAATGGTTCTCTTTTTTTTTTAAGATTAAAACAAAATGGTTCTCAAATGAAGTTTAACGTTTGAATTCTTGTTTGCATGTTTTTTTTTTTTGGTTATTTTTATCTGATTTCTTGCAGCTCCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTCATGAAGTAAGAAAAATAAATATTTGATTAATCCATAAAGACATAGAAAATTTACAATTTTTTAATTAATAAATAAAAATGAAAACTTTACTATATTAATTTGTCAGAGAGGAGATTAAGCGAATCAAAGCTGCCAACCCAGAAGTACCACATCGAGAAGCATTCAGTGCAGCAGCAAAGAATGTAATCAAACTTTATTTTAAAATTATTTTAATTTTCCATTTTCTTGAACCATATTCATCATCATTTATTAACCTTGTTCAAATTAATGGTGTCACAACAGTGGGCTAGGTACATTCCAAATCCAGCTGGTGGGTCCATTTCTGGGACTCGCAACAATGTAAGAATTAAAAAAAAAAAGAAAAAAAAAGTGTAGTAATTAAATGCAATTGTTTTAGCAATGTGAGATTTAGGGTTTGTAGGGTTTTGAATTTTGCAGGAATGAAAAAGTTTAGCAAGAATCTGACAAATCCAGGTGGCGGTCTAGGATTCGATAAAGTTTAA

mRNA sequence

ATGAGCTCTGAAGATAAATCTTCCATGGATTTGGTCCAACCTTCTGAGCATCTCTGTTATGTGAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGGATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGCAGTAATCTCTCCTTTCTGAGCACAAGGCCCCCTTTACAAGGCCAATGCATTGACCATCCTTTCAGTTTTCAGTCTCAGATTGGCTTCCCAAATGATCTTCGGAAGGGCGCATCGACATCGTCCTCATCGATATCGTCTTCAATGGCGAACGAGCCCCCCTCTCCAAATTTTGTTGTTAAACCTCCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTAAGCGAATCAAAGCTGCCAACCCAGAAGTACCACATCGAGAAGCATTCAGTGCAGCAGCAAAGAATTGGGCTAGGTACATTCCAAATCCAGCTGGTGGGTCCATTTCTGGGACTCGCAACAATAATCTGACAAATCCAGGTGGCGGTCTAGGATTCGATAAAGTTTAA

Coding sequence (CDS)

ATGAGCTCTGAAGATAAATCTTCCATGGATTTGGTCCAACCTTCTGAGCATCTCTGTTATGTGAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGGATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGCAGTAATCTCTCCTTTCTGAGCACAAGGCCCCCTTTACAAGGCCAATGCATTGACCATCCTTTCAGTTTTCAGTCTCAGATTGGCTTCCCAAATGATCTTCGGAAGGGCGCATCGACATCGTCCTCATCGATATCGTCTTCAATGGCGAACGAGCCCCCCTCTCCAAATTTTGTTGTTAAACCTCCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTAAGCGAATCAAAGCTGCCAACCCAGAAGTACCACATCGAGAAGCATTCAGTGCAGCAGCAAAGAATTGGGCTAGGTACATTCCAAATCCAGCTGGTGGGTCCATTTCTGGGACTCGCAACAATAATCTGACAAATCCAGGTGGCGGTCTAGGATTCGATAAAGTTTAA

Protein sequence

MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNNNLTNPGGGLGFDKV

Homology

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BLAST of Sed0007972 vs. NCBI nr
Match: XP_022944998.1 (protein CRABS CLAW [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60
           MSSEDKSSMDLVQPS+HLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 61  PLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 120
           PLQGQCIDHP SFQSQ+GF ND+RKGASTSSSS SSSMANE PS NFVVKPPEKKHRLPS
Sbjct: 61  PLQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPS 120

Query: 121 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS SGT +N
Sbjct: 121 AYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 171

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BLAST of Sed0007972 vs. NCBI nr
Match: KAG7013095.1 (Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60
           MSSEDKSSMDLVQPS+HLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 45  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 104

Query: 61  PLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 120
           PLQGQCIDHP SFQSQ+GF ND+RKGASTSSSS SSSMANE PS NFVVKPPEKKHRLPS
Sbjct: 105 PLQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPS 164

Query: 121 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS SGT +N
Sbjct: 165 AYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 215

[Close]

BLAST of Sed0007972 vs. NCBI nr
Match: XP_038893343.1 (protein CRABS CLAW isoform X1 [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 4.8e-83
Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 2   SSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61
           +S+DKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP
Sbjct: 5   NSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 64

Query: 62  LQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPSA 121
           LQGQCIDHP SFQSQ+GF ND+RKGASTSS+S SSS+ NE PSPNFVVKPPEKKHRLPSA
Sbjct: 65  LQGQCIDHPLSFQSQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSA 124

Query: 122 YNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRN 171
           YNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS+SGT N
Sbjct: 125 YNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 173

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BLAST of Sed0007972 vs. NCBI nr
Match: XP_023542830.1 (protein CRABS CLAW [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 8.2e-83
Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60
           MSSEDKSSMDLVQPS+HLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 61  PLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 120
           PLQGQCIDHP SFQSQ+GF  D+RKGASTSSSS SSSMANE PS NFVVKPPEKKHRLPS
Sbjct: 61  PLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPS 120

Query: 121 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS SGT +N
Sbjct: 121 AYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 171

[Close]

BLAST of Sed0007972 vs. NCBI nr
Match: XP_022149102.1 (protein CRABS CLAW [Momordica charantia])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MSSED-KSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           MSSED K+SMDLVQPSEHLCYV+CNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR
Sbjct: 1   MSSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60

Query: 61  PPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLP 120
           PPLQGQCIDHP  FQ+Q+GF ND+RKGASTSS+S SSSMANE PSP+FVVKPPEKKHRLP
Sbjct: 61  PPLQGQCIDHPLGFQTQVGFSNDIRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRLP 120

Query: 121 SAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           SAYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS+SGT NN
Sbjct: 121 SAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 172

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BLAST of Sed0007972 vs. ExPASy Swiss-Prot
Match: Q8L925 (Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 3.0e-51
Identity = 107/173 (61.85%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPS---EHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLS 60
           M+ E+K +M   + S   EHL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+
Sbjct: 1   MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT 60

Query: 61  TRPPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHR 120
           T PPLQG       + Q Q    +D +KG+S+SSSS +SS     PSP FVVKPPEKK R
Sbjct: 61  TTPPLQGHV---SLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQR 120

Query: 121 LPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRN 171
           LPSAYNRFM++EI+RIK+ANPE+PHREAFSAAAKNWA+YIPN      SG  N
Sbjct: 121 LPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN 170

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BLAST of Sed0007972 vs. ExPASy Swiss-Prot
Match: Q76EJ0 (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46
Identity = 102/167 (61.08%), Postives = 120/167 (71.86%), Query Frame = 0


Query: 9   MDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQC-- 68
           MDLV PSEHLCYV+C +CNTVLAVG+PC+RL+DTVTVKCGHC+NLSFLS RPP+      
Sbjct: 1   MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSP 60

Query: 69  IDHPFS-FQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPSAYNRF 128
            DHP   FQ   G   D R+       S +S+  +  P   FVVKPPEKKHRLPSAYNRF
Sbjct: 61  TDHPLGPFQ---GPCTDCRRNQPLPLVSPTSNEGS--PRAPFVVKPPEKKHRLPSAYNRF 120

Query: 129 MKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNNN 173
           M+EEI+RIKAA P++PHREAFS AAKNWA+   +P   S   T N+N
Sbjct: 121 MREEIQRIKAAKPDIPHREAFSMAAKNWAKC--DPRCSSTVSTSNSN 160

[Close]

BLAST of Sed0007972 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.0e-32
Identity = 78/169 (46.15%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 12  VQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR------PPLQGQ 71
           + P+E +CYV CNFCNT+LAV +P   +L+ VTV+CGHC+NL  ++ R      P LQ  
Sbjct: 5   IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDH 64

Query: 72  CIDH------PFSFQSQIGFPNDLRKGASTSS---------SSISSSMANEPPSPNFVVK 131
              H         F+ Q G+P      AS+SS         + +S S  N+        +
Sbjct: 65  HHHHLQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHAR 124

Query: 132 PPEKKHRLPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPN 160
           PPEK+ R+PSAYNRF+KEEI+RIKA NP++ HREAFS AAKNWA Y PN
Sbjct: 125 PPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHY-PN 172

[Close]

BLAST of Sed0007972 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 76/172 (44.19%), Postives = 103/172 (59.88%), Query Frame = 0


Query: 8   SMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCI 67
           S D   PS+HLCYV+CNFC T+LAV +P   L  TVTV+CG C+NL  ++ R       +
Sbjct: 15  SPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMR----SYVL 74

Query: 68  DHPFSFQSQIG-----FPNDLRKGASTSSSSISSSMANEPPS----PNF----------- 127
                 Q Q+G      P D+ +    + S+++  M N+ P+    P+F           
Sbjct: 75  PASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPK 134

Query: 128 ---VVKPPEKKHRLPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARY 157
              V +PPEK+ R+PSAYNRF+KEEI+RIKA NP++ HREAFSAAAKNWA +
Sbjct: 135 APPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 182

[Close]

BLAST of Sed0007972 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29
Identity = 71/161 (44.10%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 8   SMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR-------- 67
           S  +V   EH+CYV CNFCNT+ AV +P   +L+ VTV+CGHC++L  ++ R        
Sbjct: 2   SAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPA 61

Query: 68  -PPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRL 127
              LQ     H  SF+      N    G+S+    +    +         V+PPEK+ R+
Sbjct: 62  EDHLQDNLKMHNMSFRE-----NYSEYGSSSRYGRVPMMFSKNDTEHMLHVRPPEKRQRV 121

Query: 128 PSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPN 160
           PSAYNRF+KEEI+RIKA NP++ HREAFS AAKNWA + PN
Sbjct: 122 PSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHF-PN 156

[Close]

BLAST of Sed0007972 vs. ExPASy TrEMBL
Match: A0A6J1FZK6 (protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.0e-84
Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60
           MSSEDKSSMDLVQPS+HLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 61  PLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 120
           PLQGQCIDHP SFQSQ+GF ND+RKGASTSSSS SSSMANE PS NFVVKPPEKKHRLPS
Sbjct: 61  PLQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPS 120

Query: 121 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS SGT +N
Sbjct: 121 AYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 171

[Close]

BLAST of Sed0007972 vs. ExPASy TrEMBL
Match: A0A6J1D6X3 (protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MSSED-KSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60
           MSSED K+SMDLVQPSEHLCYV+CNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR
Sbjct: 1   MSSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60

Query: 61  PPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLP 120
           PPLQGQCIDHP  FQ+Q+GF ND+RKGASTSS+S SSSMANE PSP+FVVKPPEKKHRLP
Sbjct: 61  PPLQGQCIDHPLGFQTQVGFSNDIRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRLP 120

Query: 121 SAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           SAYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS+SGT NN
Sbjct: 121 SAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 172

[Close]

BLAST of Sed0007972 vs. ExPASy TrEMBL
Match: A0A6J1HVT7 (protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.7e-81
Identity = 154/174 (88.51%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60
           MSSEDK+SMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MSSEDKASMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 61  PLQGQCIDHPFSFQSQIGFPNDLRKGAST---SSSSISSSMANEPPSPNFVVKPPEKKHR 120
           PLQGQCIDHP SFQSQ+GF N++RKGAST   SSSS SSSMANE PS NFVVKPPEKKHR
Sbjct: 61  PLQGQCIDHPLSFQSQVGFSNNIRKGASTSSSSSSSSSSSMANESPSANFVVKPPEKKHR 120

Query: 121 LPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           LPSAYNRFMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN   GS SGT +N
Sbjct: 121 LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSVDGSASGTHDN 174

[Close]

BLAST of Sed0007972 vs. ExPASy TrEMBL
Match: A0A6J1ITA5 (protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.5e-77
Identity = 145/171 (84.80%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 2   SSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61
           SSEDKSSMDLVQP++HLCYVKCNFCNT+LAVGIPCRRLL+TVTVKCG+CSNLSFLST PP
Sbjct: 3   SSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTIPP 62

Query: 62  LQGQCID-HPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 121
           LQGQCID HP +FQ Q+GF ND RKGAS SS+S SSSM NEPPSP+FVVKPPEKKHRLPS
Sbjct: 63  LQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRLPS 122

Query: 122 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYN FMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS+SGT N+
Sbjct: 123 AYNCFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTPND 173

[Close]

BLAST of Sed0007972 vs. ExPASy TrEMBL
Match: A0A6J1IU64 (protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.5e-77
Identity = 145/171 (84.80%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 2   SSEDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61
           SSEDKSSMDLVQP++HLCYVKCNFCNT+LAVGIPCRRLL+TVTVKCG+CSNLSFLST PP
Sbjct: 3   SSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTIPP 62

Query: 62  LQGQCID-HPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHRLPS 121
           LQGQCID HP +FQ Q+GF ND RKGAS SS+S SSSM NEPPSP+FVVKPPEKKHRLPS
Sbjct: 63  LQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRLPS 122

Query: 122 AYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRNN 172
           AYN FMKEEI+RIKAANPE+PHREAFSAAAKNWARYIPN A GS+SGT N+
Sbjct: 123 AYNCFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTPND 173

[Close]

BLAST of Sed0007972 vs. TAIR 10
Match: AT1G69180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 107/173 (61.85%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 1   MSSEDKSSMDLVQPS---EHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLS 60
           M+ E+K +M   + S   EHL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+
Sbjct: 1   MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT 60

Query: 61  TRPPLQGQCIDHPFSFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVVKPPEKKHR 120
           T PPLQG       + Q Q    +D +KG+S+SSSS +SS     PSP FVVKPPEKK R
Sbjct: 61  TTPPLQGHV---SLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQR 120

Query: 121 LPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARYIPNPAGGSISGTRN 171
           LPSAYNRFM++EI+RIK+ANPE+PHREAFSAAAKNWA+YIPN      SG  N
Sbjct: 121 LPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN 170

[Close]

BLAST of Sed0007972 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 76/172 (44.19%), Postives = 103/172 (59.88%), Query Frame = 0


Query: 8   SMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCI 67
           S D   PS+HLCYV+CNFC T+LAV +P   L  TVTV+CG C+NL  ++ R       +
Sbjct: 15  SPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMR----SYVL 74

Query: 68  DHPFSFQSQIG-----FPNDLRKGASTSSSSISSSMANEPPS----PNF----------- 127
                 Q Q+G      P D+ +    + S+++  M N+ P+    P+F           
Sbjct: 75  PASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPK 134

Query: 128 ---VVKPPEKKHRLPSAYNRFMKEEIKRIKAANPEVPHREAFSAAAKNWARY 157
              V +PPEK+ R+PSAYNRF+KEEI+RIKA NP++ HREAFSAAAKNWA +
Sbjct: 135 APPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 182

[Close]

BLAST of Sed0007972 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 68/146 (46.58%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 12  VQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPF 71
           V  +E LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ   +  P 
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--LSRPN 64

Query: 72  SFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVV-KPPEKKHRLPSAYNRFMKEEI 131
              +    P      +S S + I S ++    +   +V +PPEK+ R+PSAYN+F+KEEI
Sbjct: 65  FQATNYAVPE--YGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEI 124

Query: 132 KRIKAANPEVPHREAFSAAAKNWARY 157
           +RIKA NP++ HREAFS AAKNWA +
Sbjct: 125 QRIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of Sed0007972 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 68/146 (46.58%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 12  VQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPF 71
           V  +E LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ   +  P 
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--LSRPN 64

Query: 72  SFQSQIGFPNDLRKGASTSSSSISSSMANEPPSPNFVV-KPPEKKHRLPSAYNRFMKEEI 131
              +    P      +S S + I S ++    +   +V +PPEK+ R+PSAYN+F+KEEI
Sbjct: 65  FQATNYAVPE--YGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEI 124

Query: 132 KRIKAANPEVPHREAFSAAAKNWARY 157
           +RIKA NP++ HREAFS AAKNWA +
Sbjct: 125 QRIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of Sed0007972 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 71/153 (46.41%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 15  SEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFL--------STRPPLQGQC 74
           SE +CYV C+FC T+LAV +P   L   VTV+CGHC+NL  L        ++ PP+    
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 75  IDHPFSFQSQIGFPNDLRKGASTSSSS---ISSSMANEPPSPNFVVKPPEKKHRLPSAYN 134
             H     S +      RK  ++SS S   +S ++  E P     ++PPEK+ R+PSAYN
Sbjct: 67  QPHRQHTTSLV-----TRKDCASSSRSTNNLSENIDREAPRMP-PIRPPEKRQRVPSAYN 126

Query: 135 RFMKEEIKRIKAANPEVPHREAFSAAAKNWARY 157
           RF+KEEI+RIKA NPE+ HREAFS AAKNWA +
Sbjct: 127 RFIKEEIQRIKACNPEISHREAFSTAAKNWAHF 153

The following BLAST results are available for this feature:

BLAST of Sed0007972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944998.1	1.7e-83	91.23	protein CRABS CLAW [Cucurbita moschata]	[more]
KAG7013095.1	1.7e-83	91.23	Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038893343.1	4.8e-83	89.94	protein CRABS CLAW isoform X1 [Benincasa hispida]	[more]
XP_023542830.1	8.2e-83	90.64	protein CRABS CLAW [Cucurbita pepo subsp. pepo]	[more]
XP_022149102.1	3.1e-82	88.95	protein CRABS CLAW [Momordica charantia]	[more]

BLAST of Sed0007972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L925	3.0e-51	61.85	Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2	[more]
Q76EJ0	1.7e-46	61.08	Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1	[more]
Q2QM17	9.0e-32	46.15	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
O22152	2.2e-30	44.19	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q10FZ7	1.9e-29	44.10	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]

BLAST of Sed0007972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZK6	8.0e-84	91.23	protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1	[more]
A0A6J1D6X3	1.5e-82	88.95	protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1	[more]
A0A6J1HVT7	3.7e-81	88.51	protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1	[more]
A0A6J1ITA5	9.5e-77	84.80	protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]
A0A6J1IU64	9.5e-77	84.80	protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]

BLAST of Sed0007972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69180.1	2.1e-52	61.85	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	1.6e-31	44.19	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.3e-30	46.58	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.3e-30	46.58	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	2.5e-29	46.41	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 102..158 e-value: 2.5E-6 score: 29.7
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 102..154
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 14..156 e-value: 5.3E-52 score: 176.8
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 7..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	PANTHER	PTHR31675:SF1	PROTEIN CRABS CLAW	coord: 7..170
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 117..153 e-value: 3.54827E-6 score: 41.0742

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007972.1	Sed0007972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010254	nectary development
biological_process	GO:0048479	style development
biological_process	GO:0007275	multicellular organism development
molecular_function	GO:0000976	transcription cis-regulatory region binding