Sed0007969 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTTGCAAGTATTATTCATGAAGGTAATAAGTGGGATACAAATTTGATTAAGGCGATTTGCTCGAAAGAAGAGGCTGATGCTATTTGTGGCATCCCGTTGGGGTCAATGGATAGGCATGATGAAATTATTTGGAATGCAAATTCTAACGGTGTGTTCAGTGTGAAAAGTGCCTACCACTTAGCGATGGATTTATCTAGAGTTGGAGAAGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTTTGAAAAATATGATTCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGTAACTGTTGTACGTTATGTGGGATGCTGAATGAAACAAATTTGCATGTGATTAAGGATTGCAAGTATGCGGTCCATGTGTGGATGTCTATTTTTCCTGCATTAACTGACTTTATTTCTTTTTTCAGGAATGCTTACTCGGGGGAATTATTTTGGCAAGGAATTTGTGCAAAAATCCCTATTCAGGATCGGCCAAAAGCCGTAGTTATAATTTGGCAACTTTGGAACTTTCGAAATTCTGTGTTGCATAG ATGAAAGTTGCAAGTATTATTCATGAAGGTAATAAGTGGGATACAAATTTGATTAAGGCGATTTGCTCGAAAGAAGAGGCTGATGCTATTTGTGGCATCCCGTTGGGGTCAATGGATAGGCATGATGAAATTATTTGGAATGCAAATTCTAACGGTGTGTTCAGTGTGAAAAGTGCCTACCACTTAGCGATGGATTTATCTAGAGTTGGAGAAGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTTTGAAAAATATGATTCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGTAACTGTTGTACGTTATGTGGGATGCTGAATGAAACAAATTTGCATGTGATTAAGGATTGCAAGTATGCGGTCCATGAATGCTTACTCGGGGGAATTATTTTGGCAAGGAATTTGTGCAAAAATCCCTATTCAGGATCGGCCAAAAGCCGTAGTTATAATTTGGCAACTTTGGAACTTTCGAAATTCTGTGTTGCATAG ATGAAAGTTGCAAGTATTATTCATGAAGGTAATAAGTGGGATACAAATTTGATTAAGGCGATTTGCTCGAAAGAAGAGGCTGATGCTATTTGTGGCATCCCGTTGGGGTCAATGGATAGGCATGATGAAATTATTTGGAATGCAAATTCTAACGGTGTGTTCAGTGTGAAAAGTGCCTACCACTTAGCGATGGATTTATCTAGAGTTGGAGAAGCTTCTACCTCTGATAATTCGATGTCAACAAAGTTGTGGAATTCTTTCTGGAAGGTTGAGGCAGTTCCCAAGATTAAGTTGGGTGCTTGGAATATTTTGAAAAATATGATTCCGACAAGGGCCAACATTCAGTCGAAGGGAATTGATATTCGTAACTGTTGTACGTTATGTGGGATGCTGAATGAAACAAATTTGCATGTGATTAAGGATTGCAAGTATGCGGTCCATGAATGCTTACTCGGGGGAATTATTTTGGCAAGGAATTTGTGCAAAAATCCCTATTCAGGATCGGCCAAAAGCCGTAGTTATAATTTGGCAACTTTGGAACTTTCGAAATTCTGTGTTGCATAG MKVASIIHEGNKWDTNLIKAICSKEEADAICGIPLGSMDRHDEIIWNANSNGVFSVKSAYHLAMDLSRVGEASTSDNSMSTKLWNSFWKVEAVPKIKLGAWNILKNMIPTRANIQSKGIDIRNCCTLCGMLNETNLHVIKDCKYAVHECLLGGIILARNLCKNPYSGSAKSRSYNLATLELSKFCVA Homology
BLAST of Sed0007969 vs. NCBI nr
Match: XP_035544594.1 (uncharacterized protein LOC118347987 [Juglans regia]) HSP 1 Score: 112.1 bits (279), Expect = 5.3e-21 Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of Sed0007969 vs. NCBI nr
Match: XP_035546588.1 (uncharacterized protein LOC118348634 [Juglans regia]) HSP 1 Score: 111.3 bits (277), Expect = 9.0e-21 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0
BLAST of Sed0007969 vs. NCBI nr
Match: XP_035544636.1 (uncharacterized protein LOC118348020 [Juglans regia]) HSP 1 Score: 111.3 bits (277), Expect = 9.0e-21 Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 0
BLAST of Sed0007969 vs. NCBI nr
Match: XP_023902041.1 (uncharacterized protein LOC112013897 [Quercus suber]) HSP 1 Score: 111.3 bits (277), Expect = 9.0e-21 Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
BLAST of Sed0007969 vs. NCBI nr
Match: EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group]) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-20 Identity = 51/143 (35.66%), Postives = 85/143 (59.44%), Query Frame = 0
BLAST of Sed0007969 vs. ExPASy TrEMBL
Match: A0A6P9EAZ3 (uncharacterized protein LOC118347987 OS=Juglans regia OX=51240 GN=LOC118347987 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of Sed0007969 vs. ExPASy TrEMBL
Match: A0A6P9EBC5 (uncharacterized protein LOC118348020 OS=Juglans regia OX=51240 GN=LOC118348020 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-21 Identity = 59/154 (38.31%), Postives = 84/154 (54.55%), Query Frame = 0
BLAST of Sed0007969 vs. ExPASy TrEMBL
Match: A0A6P9ERU8 (uncharacterized protein LOC118348634 OS=Juglans regia OX=51240 GN=LOC118348634 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-21 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0
BLAST of Sed0007969 vs. ExPASy TrEMBL
Match: B8AFP4 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06800 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21 Identity = 51/143 (35.66%), Postives = 85/143 (59.44%), Query Frame = 0
BLAST of Sed0007969 vs. ExPASy TrEMBL
Match: A0A2N9I4S0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46946 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21 Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of Sed0007969 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11 Identity = 39/147 (26.53%), Postives = 61/147 (41.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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