Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTCATTTGCACCAAATCTCCATTTTTCTCTTCATTTTCTAAACCACAATACACACTTTTTTCACAACTGAAATTACACCAAAATTTCTCAATTCACATCTTTTCTTTCTCCCCAAGAATTCCCAAACAACACAAAGGAAAAAAAAAAAGAGAGAGAAATGAGTGAAGAACTCTCCCCATCATATTTGTTACTCTCTCAAATCTCCCAATTCTTTTCCTTAATTCTTTCACACCCTCTTTATTTCTCTTATTTCCTCTTTTTCTCCCCTTATCTTTTCAAAATCTTCTCATTTCTTTCCCCTCTTTTCACCACCACTTTTCTCCTTCTCCTAGCCTTCTTTTTCACATTTTCAAATTCCCACCAAAGCCAAGATGACCAATCAACACCCCCTCTTCCTCAACAAAGTGAATGGTTCAATACCCTTTTTAACACACCCTTAGAAATCCCCATCATCCCATTTCAACTTGAAGATCAAGAACCTGAAATAAAGAAAGAAATCAACATTTGCTTCTCACATGTCAACAAACAAGAAGCAAAAGATGATGATGATGATGATCATCATGATCATGATATTAGAGAAAATGGGAGTGAAATGGAAGTGAAAGATAAGAGCTTTTTGGTGGGATCATGCAAATTGGTGTGTGAAGTTGATGAGGAGAAAATGGATTTGCTTTGGGAGAAGTATGAGGAAAAGGAGAAATTGGTAGTTGATGAAAAGAAAGATGAAAAGGAAGATGAAAAGAGATGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAGGAAGAAGAGGAGGAGGAAGAAGAAAGTACTGGGAAGATTTGTTGCTTACAAGCTTTGAAATTTTCAAGTGGTAAAATGAGATTTGGAATGGGAAAGAAAAGTGGTTTGAAGAAGATTTCTAAGGCTCTCAAAGGGCTTAAATTGTTGAATCAACTTGTCAACAATGGTAAGAACAAAACACGCCAACGAGAACAGTAACTCATTTCGATGTATTATTAATCTCGAGGGTAATGGTTAATCACCCAACAATGGTAAGAACAAGACATATTCTTGAGTTTCTTTTTTTGTGCTCATCAAATTACAAAGATCATTGTGTATTATTGTTGGTTTTGGGTTTCGTTTTCAAATTTGTTTTTGGTCTAATAATGCATTAATTTATTCTAATGTTCTTTTGGATGGAAATGTGATATTTCTTAACCAAATTTAGAACGTCTCTATTATTTTGAGTGCCCTTTTTGCTTGAAACATAGTTATTCCATGTTCATGTTTTTCGTCGACACATTTTTGTTCTAAA
mRNA sequence
CTTTCTTTCATTTGCACCAAATCTCCATTTTTCTCTTCATTTTCTAAACCACAATACACACTTTTTTCACAACTGAAATTACACCAAAATTTCTCAATTCACATCTTTTCTTTCTCCCCAAGAATTCCCAAACAACACAAAGGAAAAAAAAAAAGAGAGAGAAATGAGTGAAGAACTCTCCCCATCATATTTGTTACTCTCTCAAATCTCCCAATTCTTTTCCTTAATTCTTTCACACCCTCTTTATTTCTCTTATTTCCTCTTTTTCTCCCCTTATCTTTTCAAAATCTTCTCATTTCTTTCCCCTCTTTTCACCACCACTTTTCTCCTTCTCCTAGCCTTCTTTTTCACATTTTCAAATTCCCACCAAAGCCAAGATGACCAATCAACACCCCCTCTTCCTCAACAAAGTGAATGGTTCAATACCCTTTTTAACACACCCTTAGAAATCCCCATCATCCCATTTCAACTTGAAGATCAAGAACCTGAAATAAAGAAAGAAATCAACATTTGCTTCTCACATGTCAACAAACAAGAAGCAAAAGATGATGATGATGATGATCATCATGATCATGATATTAGAGAAAATGGGAGTGAAATGGAAGTGAAAGATAAGAGCTTTTTGGTGGGATCATGCAAATTGGTGTGTGAAGTTGATGAGGAGAAAATGGATTTGCTTTGGGAGAAGTATGAGGAAAAGGAGAAATTGGTAGTTGATGAAAAGAAAGATGAAAAGGAAGATGAAAAGAGATGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAGGAAGAAGAGGAGGAGGAAGAAGAAAGTACTGGGAAGATTTGTTGCTTACAAGCTTTGAAATTTTCAAGTGGTAAAATGAGATTTGGAATGGGAAAGAAAAGTGGTTTGAAGAAGATTTCTAAGGCTCTCAAAGGGCTTAAATTGTTGAATCAACTTGTCAACAATGGTAAGAACAAAACACGCCAACGAGAACAGTAACTCATTTCGATGTATTATTAATCTCGAGGGTAATGGTTAATCACCCAACAATGGTAAGAACAAGACATATTCTTGAGTTTCTTTTTTTGTGCTCATCAAATTACAAAGATCATTGTGTATTATTGTTGGTTTTGGGTTTCGTTTTCAAATTTGTTTTTGGTCTAATAATGCATTAATTTATTCTAATGTTCTTTTGGATGGAAATGTGATATTTCTTAACCAAATTTAGAACGTCTCTATTATTTTGAGTGCCCTTTTTGCTTGAAACATAGTTATTCCATGTTCATGTTTTTCGTCGACACATTTTTGTTCTAAA
Coding sequence (CDS)
ATGAGTGAAGAACTCTCCCCATCATATTTGTTACTCTCTCAAATCTCCCAATTCTTTTCCTTAATTCTTTCACACCCTCTTTATTTCTCTTATTTCCTCTTTTTCTCCCCTTATCTTTTCAAAATCTTCTCATTTCTTTCCCCTCTTTTCACCACCACTTTTCTCCTTCTCCTAGCCTTCTTTTTCACATTTTCAAATTCCCACCAAAGCCAAGATGACCAATCAACACCCCCTCTTCCTCAACAAAGTGAATGGTTCAATACCCTTTTTAACACACCCTTAGAAATCCCCATCATCCCATTTCAACTTGAAGATCAAGAACCTGAAATAAAGAAAGAAATCAACATTTGCTTCTCACATGTCAACAAACAAGAAGCAAAAGATGATGATGATGATGATCATCATGATCATGATATTAGAGAAAATGGGAGTGAAATGGAAGTGAAAGATAAGAGCTTTTTGGTGGGATCATGCAAATTGGTGTGTGAAGTTGATGAGGAGAAAATGGATTTGCTTTGGGAGAAGTATGAGGAAAAGGAGAAATTGGTAGTTGATGAAAAGAAAGATGAAAAGGAAGATGAAAAGAGATGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAGGAAGAAGAGGAGGAGGAAGAAGAAAGTACTGGGAAGATTTGTTGCTTACAAGCTTTGAAATTTTCAAGTGGTAAAATGAGATTTGGAATGGGAAAGAAAAGTGGTTTGAAGAAGATTTCTAAGGCTCTCAAAGGGCTTAAATTGTTGAATCAACTTGTCAACAATGGTAAGAACAAAACACGCCAACGAGAACAGTAA
Protein sequence
MSEELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFTFSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNKQEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLVVDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEESTGKICCLQALKFSSGKMRFGMGKKSGLKKISKALKGLKLLNQLVNNGKNKTRQREQ
Homology
BLAST of Sed0007907 vs. NCBI nr
Match:
XP_023513792.1 (uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo] >XP_023513794.1 uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo] >XP_023513795.1 uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 276.2 bits (705), Expect = 3.2e-70
Identity = 179/274 (65.33%), Postives = 197/274 (71.90%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SP +S+ISQFFSL+LSHPLYFSYFLFFSPYLF++ SF+SPL TTFLL+L F
Sbjct: 64 EFSPLAQFVSEISQFFSLLLSHPLYFSYFLFFSPYLFRLLSFVSPLLATTFLLILQPF-- 123
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P +IP PF L QEPEI NK
Sbjct: 124 FSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPL--QEPEI-----------NK 183
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++DH D + RENG EM KSFLVG CK E DE+KMDLLWEKYEEK
Sbjct: 184 QEAK---EEDHEDEESRENGIEM--GKKSFLVG-CK-EFEDDEDKMDLLWEKYEEK---- 243
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEM---EEEEEEEEESTGKICCLQALKFSSGKM 243
DEK CNLKKDLRSLVNLQKEM EEEEEEEEE TGKICCLQALK S+GKM
Sbjct: 244 ---------DEKSCNLKKDLRSLVNLQKEMEEEEEEEEEEEEETGKICCLQALKLSTGKM 302
Query: 244 RFGMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
RFGMGKKSGLKKISKA KGLKLL+QL KNKT
Sbjct: 304 RFGMGKKSGLKKISKAFKGLKLLHQLATTRKNKT 302
BLAST of Sed0007907 vs. NCBI nr
Match:
XP_023004158.1 (uncharacterized protein LOC111497570 [Cucurbita maxima] >XP_023004159.1 uncharacterized protein LOC111497570 [Cucurbita maxima])
HSP 1 Score: 270.4 bits (690), Expect = 1.7e-68
Identity = 177/271 (65.31%), Postives = 194/271 (71.59%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SPS +S+ISQ FSL+LSHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 62 EFSPSAQFVSEISQCFSLLLSHPLYFSYFLFFSPYLLRLLSFVSPLLATTFLLILQPF-- 121
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P IP PF L QEPEI NK
Sbjct: 122 FSHTHQTHLDDQTFPLPQHLEWFNTVFNGPTGIPTNPFPL--QEPEI-----------NK 181
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++DH D + RENG EM KSFLVG CK E DE+KMDLLWEKYEEK
Sbjct: 182 QEAK---EEDHEDEETRENGIEM--GKKSFLVG-CK-EFEDDEDKMDLLWEKYEEK---- 241
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEESTGKICCLQALKFSSGKMRFG 243
DEK CNLKKDLRSLVNLQKEMEEEEEEEEE TGKICCLQALK S+GKMRFG
Sbjct: 242 ---------DEKSCNLKKDLRSLVNLQKEMEEEEEEEEE-TGKICCLQALKLSTGKMRFG 296
Query: 244 MGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
MGKKSGLKKISKA KG KLL+QL KNKT
Sbjct: 302 MGKKSGLKKISKAFKGFKLLHQLATTRKNKT 296
BLAST of Sed0007907 vs. NCBI nr
Match:
KAG6593013.1 (hypothetical protein SDJN03_12489, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 268.1 bits (684), Expect = 8.6e-68
Identity = 175/274 (63.87%), Postives = 195/274 (71.17%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SP +S+ISQFFSL+LSHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 13 EFSPLSQFVSEISQFFSLLLSHPLYFSYFLFFSPYLLRLLSFVSPLLGTTFLLILQPF-- 72
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P +IP PF L QEPEI NK
Sbjct: 73 FSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPL--QEPEI-----------NK 132
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++D D + RENG EM KSFLVG CK E DE++MDLLWEKYEEK
Sbjct: 133 QEAK---EEDREDEESRENGIEM--GKKSFLVG-CK-EFEDDEDRMDLLWEKYEEK---- 192
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEE---STGKICCLQALKFSSGKM 243
DEK CNLKKDLRSLVN+QKEMEEEEEEEEE TGKICCLQALK S+GKM
Sbjct: 193 ---------DEKSCNLKKDLRSLVNIQKEMEEEEEEEEEEEGETGKICCLQALKLSTGKM 251
Query: 244 RFGMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
RFGMGKKSGLKKISKA KGLKLL+QL KNKT
Sbjct: 253 RFGMGKKSGLKKISKAFKGLKLLHQLATTRKNKT 251
BLAST of Sed0007907 vs. NCBI nr
Match:
KAG7025422.1 (hypothetical protein SDJN02_11917, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 267.3 bits (682), Expect = 1.5e-67
Identity = 175/276 (63.41%), Postives = 195/276 (70.65%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SP +S+ISQFFSL+LSHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 13 EFSPLSQFVSEISQFFSLLLSHPLYFSYFLFFSPYLLRLLSFVSPLLGTTFLLILQPF-- 72
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P +IP PF L QEPEI NK
Sbjct: 73 FSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPL--QEPEI-----------NK 132
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++D D + RENG EM KSFLVG CK E DE++MDLLWEKYEEK
Sbjct: 133 QEAK---EEDREDEESRENGIEM--GKKSFLVG-CK-EFEDDEDRMDLLWEKYEEK---- 192
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEE-----STGKICCLQALKFSSG 243
DEK CNLKKDLRSLVN+QKEMEEEEEEEEE TGKICCLQALK S+G
Sbjct: 193 ---------DEKSCNLKKDLRSLVNIQKEMEEEEEEEEEEEEEGETGKICCLQALKLSTG 252
Query: 244 KMRFGMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
KMRFGMGKKSGLKKISKA KGLKLL+QL KNKT
Sbjct: 253 KMRFGMGKKSGLKKISKAFKGLKLLHQLATTRKNKT 253
BLAST of Sed0007907 vs. NCBI nr
Match:
XP_022960018.1 (uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata] >XP_022960019.1 uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata] >XP_022960020.1 uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata])
HSP 1 Score: 266.2 bits (679), Expect = 3.3e-67
Identity = 173/272 (63.60%), Postives = 194/272 (71.32%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SP +S+ISQFFSL++SHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 9 EFSPLAQFVSEISQFFSLLISHPLYFSYFLFFSPYLLRLLSFVSPLLGTTFLLILQPF-- 68
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P +IP PF L QEPEI NK
Sbjct: 69 FSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPL--QEPEI-----------NK 128
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++D D + RENG EM KSFLVG CK E DE++MDLLWEKYEEK
Sbjct: 129 QEAK---EEDREDEESRENGIEM--GKKSFLVG-CK-EFEDDEDRMDLLWEKYEEK---- 188
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEE-STGKICCLQALKFSSGKMRF 243
DEK CNLKKDLRSLVN+QKEMEEEEEEEEE TGKICCLQALK S+GKMRF
Sbjct: 189 ---------DEKSCNLKKDLRSLVNIQKEMEEEEEEEEEGETGKICCLQALKLSTGKMRF 245
Query: 244 GMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
GMGKKSGLKKISKA KGLKLL+ L KNKT
Sbjct: 249 GMGKKSGLKKISKAFKGLKLLHHLATTRKNKT 245
BLAST of Sed0007907 vs. ExPASy TrEMBL
Match:
A0A6J1KYN7 (uncharacterized protein LOC111497570 OS=Cucurbita maxima OX=3661 GN=LOC111497570 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 8.4e-69
Identity = 177/271 (65.31%), Postives = 194/271 (71.59%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SPS +S+ISQ FSL+LSHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 62 EFSPSAQFVSEISQCFSLLLSHPLYFSYFLFFSPYLLRLLSFVSPLLATTFLLILQPF-- 121
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P IP PF L QEPEI NK
Sbjct: 122 FSHTHQTHLDDQTFPLPQHLEWFNTVFNGPTGIPTNPFPL--QEPEI-----------NK 181
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++DH D + RENG EM KSFLVG CK E DE+KMDLLWEKYEEK
Sbjct: 182 QEAK---EEDHEDEETRENGIEM--GKKSFLVG-CK-EFEDDEDKMDLLWEKYEEK---- 241
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEESTGKICCLQALKFSSGKMRFG 243
DEK CNLKKDLRSLVNLQKEMEEEEEEEEE TGKICCLQALK S+GKMRFG
Sbjct: 242 ---------DEKSCNLKKDLRSLVNLQKEMEEEEEEEEE-TGKICCLQALKLSTGKMRFG 296
Query: 244 MGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
MGKKSGLKKISKA KG KLL+QL KNKT
Sbjct: 302 MGKKSGLKKISKAFKGFKLLHQLATTRKNKT 296
BLAST of Sed0007907 vs. ExPASy TrEMBL
Match:
A0A6J1H9Q5 (uncharacterized protein LOC111460896 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460896 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 173/272 (63.60%), Postives = 194/272 (71.32%), Query Frame = 0
Query: 4 ELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFFFT 63
E SP +S+ISQFFSL++SHPLYFSYFLFFSPYL ++ SF+SPL TTFLL+L F
Sbjct: 9 EFSPLAQFVSEISQFFSLLISHPLYFSYFLFFSPYLLRLLSFVSPLLGTTFLLILQPF-- 68
Query: 64 FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSHVNK 123
FS++HQ+ D T PLPQ EWFNT+FN P +IP PF L QEPEI NK
Sbjct: 69 FSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPL--QEPEI-----------NK 128
Query: 124 QEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVGSCKLVCEVDEEKMDLLWEKYEEKEKLV 183
QEAK ++D D + RENG EM KSFLVG CK E DE++MDLLWEKYEEK
Sbjct: 129 QEAK---EEDREDEESRENGIEM--GKKSFLVG-CK-EFEDDEDRMDLLWEKYEEK---- 188
Query: 184 VDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEE-STGKICCLQALKFSSGKMRF 243
DEK CNLKKDLRSLVN+QKEMEEEEEEEEE TGKICCLQALK S+GKMRF
Sbjct: 189 ---------DEKSCNLKKDLRSLVNIQKEMEEEEEEEEEGETGKICCLQALKLSTGKMRF 245
Query: 244 GMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
GMGKKSGLKKISKA KGLKLL+ L KNKT
Sbjct: 249 GMGKKSGLKKISKAFKGLKLLHHLATTRKNKT 245
BLAST of Sed0007907 vs. ExPASy TrEMBL
Match:
A0A1S4E1X2 (uncharacterized protein LOC107991592 OS=Cucumis melo OX=3656 GN=LOC107991592 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 2.5e-60
Identity = 167/280 (59.64%), Postives = 198/280 (70.71%), Query Frame = 0
Query: 3 EELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTF-LLLLAFF 62
E+LSPS + LSQISQF SLI+SHPLYFSYFLFFSPY+ K+ SFLSPL T TF LLLL F
Sbjct: 8 EKLSPSSIFLSQISQFCSLIISHPLYFSYFLFFSPYILKVLSFLSPLSTVTFLLLLLPFL 67
Query: 63 FT-FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSH 122
FT FS+SHQ+QD L EW+N FNT ++ P++ E QEPEIKKEIN
Sbjct: 68 FTFFSHSHQNQDHDQ---LFLLDEWYNNFFNT-IQFPLLE---EAQEPEIKKEIN----- 127
Query: 123 VNKQEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVG-SCKLV-----CEV--DEEKMDLL 182
+++ D HH +DI E+G K VG +C ++ C+V DEEKMDLL
Sbjct: 128 ------QEETKDHHHHYDIIEDGISTRNSSKEEKVGTNCSIIKSVMECKVFEDEEKMDLL 187
Query: 183 WEKYEEKEKLVVDEKKDEKEDEKRC-NLKKDLRSLVNLQKEMEE-EEEEEEESTGKICCL 242
WEKYE++E +VV E++ K++ RC + KKDLRSLVN QKEMEE EEEEEEE GKICCL
Sbjct: 188 WEKYEDQELVVVIEEEVNKKN--RCISKKKDLRSLVNQQKEMEELEEEEEEEENGKICCL 247
Query: 243 QALKFSSGKMRFGMGKKSGLKKISKALKGLKLLNQLVNNG 271
QALKFSS KMRFGMGKK+GLKKISKA KGLK L+QL NG
Sbjct: 248 QALKFSSSKMRFGMGKKNGLKKISKAFKGLKFLHQLTTNG 267
BLAST of Sed0007907 vs. ExPASy TrEMBL
Match:
A0A0A0K4L5 (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus OX=3659 GN=Csa_7G352430 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 9.3e-60
Identity = 170/285 (59.65%), Postives = 198/285 (69.47%), Query Frame = 0
Query: 3 EELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTF-LLLLAFF 62
E+LSPS + LSQISQF SLI+SHPLYFSYFLFFSPY+ K+ SF SPL + TF LLLL F
Sbjct: 6 EKLSPSSIFLSQISQFCSLIISHPLYFSYFLFFSPYILKVLSFFSPLLSVTFLLLLLPFL 65
Query: 63 FT-FSNSHQSQDDQSTPPLPQQSEWFNTLFNTPLEIPIIPFQLEDQEPEIKKEINICFSH 122
FT FS+SHQ+QD L EW+N FN ++ P++ E QEPEIKKEI
Sbjct: 66 FTFFSHSHQNQDHDQ---LFLLDEWYNNFFNI-IQFPLLE---EAQEPEIKKEI------ 125
Query: 123 VNKQEAKDDDDDDHHDHDIRENGSEMEVKDKSFLVG-SCKLV-----CEV--DEEKMDLL 182
N++E KD D H DI ENG K VG +C +V C+V DEEKMDLL
Sbjct: 126 -NQEETKDRHD---HHCDIIENGISTRNISKEEKVGTNCSIVKSVMECKVFEDEEKMDLL 185
Query: 183 WEKYEEKEKLVVDEKKDEKEDEKRC-NLKKDLRSLVNLQKEME--EEEEEEEESTGKICC 242
WEKYE+KE +VV K+E + RC + KKDLRSLVN QKEME E++EEEEE GKICC
Sbjct: 186 WEKYEDKELVVV--IKEEVNKKNRCISKKKDLRSLVNQQKEMEELEDQEEEEEENGKICC 245
Query: 243 LQALKFSSGKMRFGMGKKSGLKKISKALKGLKLLNQLVNNGKNKT 275
LQALKFS+ KMRFGMGKK+GLKKISKA KGLK L+QL NGKNKT
Sbjct: 246 LQALKFSTSKMRFGMGKKNGLKKISKAFKGLKFLHQLTTNGKNKT 271
BLAST of Sed0007907 vs. ExPASy TrEMBL
Match:
A0A6J1DVV3 (uncharacterized protein LOC111023976 OS=Momordica charantia OX=3673 GN=LOC111023976 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 5.0e-29
Identity = 119/286 (41.61%), Postives = 154/286 (53.85%), Query Frame = 0
Query: 1 MSEELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTT---FLLL 60
M+EEL S++ + FFSLI SHPLYF Y LFFSPYL K+ FLSPL TTT FLL+
Sbjct: 1 MTEELCLSFIFFN----FFSLIFSHPLYFFYLLFFSPYLLKLLFFLSPLLTTTSLSFLLI 60
Query: 61 LAFFFTFSNSHQSQDDQSTPPLPQQSE----WFNTLFNTPLEIPIIPFQLEDQEPEIKKE 120
+F PLP+Q + W N +F P+ ++E + +I +
Sbjct: 61 PSF-----------------PLPRQDDLHHYWLNLVFEEPVR------EVETKAKDITEV 120
Query: 121 INICFSHVNKQEAKDDDDDDHHDHDIRENGSEMEVKDK--------SFLVGSCKLVCEVD 180
I + D H +++ +D+ SF
Sbjct: 121 I-----------PNKEGDRSHSSSSCSSRKKQIKQRDEWRRRSAQLSFKFFEDHYDNNNK 180
Query: 181 EEKMDLLWEKYEEKEKLVVDEKKDEKEDEKRCNLKKDLRSLVNLQKEMEEEEEEEEESTG 240
+++MDLLWE YE KE + + D K + + KKDLRSLVN +KE EE EE EEE G
Sbjct: 181 DDEMDLLWEMYEAKESKMGELVDDSKRGDDN-SKKKDLRSLVN-EKEAEEGEEAEEEEIG 240
Query: 241 KICCLQALKFSSGKMRFGMGKKSGLKKISKALKGLKLLNQLVNNGK 272
KICCLQALKFS+GKMR G+GK+SGL KISKA KGLK L+ L N+GK
Sbjct: 241 KICCLQALKFSTGKMRLGIGKRSGLTKISKAFKGLKFLHHLNNHGK 246
BLAST of Sed0007907 vs. TAIR 10
Match:
AT3G25130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). )
HSP 1 Score: 72.0 bits (175), Expect = 8.4e-13
Identity = 110/388 (28.35%), Postives = 159/388 (40.98%), Query Frame = 0
Query: 2 SEELSPSYLLLSQISQFFSLILSHPLYFSYFLFFSPYLFKIFSFLSPLFTTTFLLLLAFF 61
S ++ S LLLS F S IL+HP YFSY LFFSPY+FKI SFLSPLF TT LLLLA
Sbjct: 15 SNKIGLSSLLLSDFHLFCSFILTHPFYFSYLLFFSPYIFKILSFLSPLFVTTTLLLLALL 74
Query: 62 FTFSNSHQSQDDQSTPPLPQ-------------------QSEWFNTLFNTPL-------- 121
T D +S P +E F +L
Sbjct: 75 STLHVQDTCLDSESLETQPSFLFSFCSKLGSVLEHKFDVNNEGFKSLEELEAYKMVVEAC 134
Query: 122 ---------------------------------------EIPIIPFQLED---------- 181
++ I P + ED
Sbjct: 135 SMECASENEICSDELTFVDKFCSHESTVSESLTDETLEEQVEIQPLKFEDVIVLEKEEET 194
Query: 182 --------QEPEIKKEINICFSH---VNKQEAK-------DDDDDDHHD----------- 241
+E ++K + ++ + K+E+K D +++ +D
Sbjct: 195 KKCEKEEVEEQKVKHKSDVVLDNREEPTKEESKAQKVDLVGDSNNESYDLPKLSNFLGEG 254
Query: 242 ----HDIRENGSEMEVKDKSFLVGSCK--------LVCEVDEEK--------MDLLWEKY 261
+ + +N E V +SF GS + L C++ EE+ MD LWE Y
Sbjct: 255 EGKRNVVTKNEEEDNVSLQSF--GSMRKEKEWRRTLACKLFEERHNADVGQGMDQLWETY 314
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023513792.1 | 3.2e-70 | 65.33 | uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo] >XP_023513794.... | [more] |
| XP_023004158.1 | 1.7e-68 | 65.31 | uncharacterized protein LOC111497570 [Cucurbita maxima] >XP_023004159.1 uncharac... | [more] |
| KAG6593013.1 | 8.6e-68 | 63.87 | hypothetical protein SDJN03_12489, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7025422.1 | 1.5e-67 | 63.41 | hypothetical protein SDJN02_11917, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022960018.1 | 3.3e-67 | 63.60 | uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata] >XP_0229600... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1KYN7 | 8.4e-69 | 65.31 | uncharacterized protein LOC111497570 OS=Cucurbita maxima OX=3661 GN=LOC111497570... | [more] |
| A0A6J1H9Q5 | 1.6e-67 | 63.60 | uncharacterized protein LOC111460896 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A1S4E1X2 | 2.5e-60 | 59.64 | uncharacterized protein LOC107991592 OS=Cucumis melo OX=3656 GN=LOC107991592 PE=... | [more] |
| A0A0A0K4L5 | 9.3e-60 | 59.65 | Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus OX=3659 GN=Csa_7G3... | [more] |
| A0A6J1DVV3 | 5.0e-29 | 41.61 | uncharacterized protein LOC111023976 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G25130.1 | 8.4e-13 | 28.35 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
