Sed0007896 (gene) Chayote v1

Overview


Name	Sed0007896
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Autophagy-related protein
Location	LG09: 37443741 .. 37447372 (-)
RNA-Seq Expression	Sed0007896
Synteny	Sed0007896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATAACTCATAAATTTATGAAATGAGTGTGAATCTACCAACTAAGCCATCCCCACTTAACATTTTTCATTGGGCAAATGTATATCAAATTACTATTCATTTTAATTTCTTTTTATTTAGTTCATCTCGATCGAGAGGGCATTGCAAAGGGAGCTCTCTAATGGGGAAATCTAATTCTTTCAAGAACGAGTTCACCTACGGTACGATTAACCTGTATATGCCTGAAATTTGAGATGGTTTTTTACTGTTCTTCATCAATTTTTGCTCTTAGTTTGATTCTTTTGAAGATCGGTGTTTAATTTTGGCGTTGATTTTTTCGTAGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCCGTAAGTTGCAGATTTCTCATGTTATGTGTCTTTGATTTGAGATGATTCGGTTCTTGTTGTTGCATCTGTTTTGGATTTTGTTTAGGAATTATAGATGTCGATGAACTTTGTGAATTGAGTCGATGCATATAGGTGACGAATTTTTAGGTTTTTATCGATTTTCCTAGTTTGCTCTGAAAATGAAATTTCTATTGTTTATAGATGATTATAGTCATCGTTCTACATTTTTTCAATGTTTTCTTTGTTATCTAAGAGCAAAATCTTATGGGGTGTGACACAGTTCAATTTTGTTTGATGTTAATTCATTTGAATTTCATGGTCATGAGTTCGAGTCCGGAAATCGGTATTTGAGTTTCATATTATTTGATAGCAGTTGTGTCCTCTATGTAGGGTTTGTTGGTCCCCTTCCTCCAATTTGTACTTTAAAAAAAAAAGAGCAAAATCTTATGAGGATTTCCCCACAACTTGTGGATAGAATATGCTTGTTGATTATATTCCAGTTATGCAAAGGTGAATTCAATTCTGGTAGCCTTGGACAGAGCAATGGAAGGAAACATTCACTGTTTTTGTTGCTAAAGCCTTATTCAATACCACTGGTCCCTAAGGCCGGCCTCACCTCATTGGTCGAGGCTTGGGGTCTCCAAGACATGCTATGCTTCTTTGGAGGTTCTAAGTTCAAAACTCATGAGTGAGTTTAATTCTGGATGTTCCGTGCCATGAGTATGTAGTGGAGCGATGTTGAAATTCCCAGTTATTAAAAAAAAAAAAAACAACACCACTGTAAATAATGTGTAGACTCAATTATGTGTTCGTTTCCTTTGAAATCCATGAGACTGAATTACTAAGGTTCCGTTTGATAACTATTTTGTTTTTAGTTTTTGGTTTTTGAAATTTATGGCTACAACAACTATCTTAAAATGTTGTAGTTTGTTTGTTTTTGTTTTTGCAATTTTATTAGCATTCCCATACTTTTGTACAGAAAAATGGATCATTGTAGGAAAGGAACACATTTAGGAAATTTGAAGAAAAATAAGTTTAAATTTAAAAAACTAAATAGTTATCGAACGGGACCTGAATTAATGGTTTTCTTTTGATGTTTTGATATAATTGCAGGTCATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTATGTTCTCCCTGCATGTCTGAGCTTCCTTAGGCCCTGTTTAATAACCATTTGGGTTTTTGTTTTTTGTTTATGAAATTTAAAGCCTATTTTTACTCAAACTTCCTACGATGTGCTCCATCTTTCCTACAATATATTTATCTTTTCTTAAGAAAGTAGGTGAATACTAACCAAATTTCAAAAACAAAAACAAGCTTTTGGAAGCTACATTTTTTTGTTTTCAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGAAAAAAACTATGTTAAGGTAGTTGTTGTAGGCTTAAATTTCAAAAACAAAAAAAAAACAAAATGGTTATCAAACGGAGCCTTAATGATTCGATTTTTCTGATTTCATTTTATCTCTATCTGAAAAGCAATTCAATGGATAGAGATACTATCACTCTTAGCATAACACTCTTTGGCTTTTTGATTGGTAATGTTTGCTTCTGTTTGACTATGGAAATTTTTGGTAATTAGTATTTATTTGGTTAAATTACAAATTTGGTTCATATGGTTTTCTGAAAGTTAGAATTGTGTTCCTATGAGTTTAAATGTTAGAATAAGTTCCCATTGGTTTATTTGTGAAGTTTTATCACAAACCAAAACGATGAAATTCTAACTTAAAACCATAAGGACTAAAATTCTATGTTTCCCTTAACTATTGAGATCAAATTTGTAATATAACCTATTTATTTCATTACACCTTTACTTAAAAAACATAGTCTTGCAAGCTTGTTTTTTTTGGATATCAGTGTGATTGGTTTCTAAATTTGAACTATGATGTAACTATAGCCTTACCAATTTGATCACTCAGTGTCGTATTTTTTGTAAGGTTTTGACAAGGCTTTTGAACTATGTTTATTTTACATTTTATTTTTATAGAAAATCAGTGTTTCATTAAGAAAAAAAATGAAAGAATACACGAGCATACAAAGCGGAGCCGACAAAAAGGGATTAGAATAGAATCTATAAGAATGGCTTCTAATCAAACAAAATCCAGCCTAATGAATAAGTACAAAATAACTAGTACCAAGGTTCAAAGTAAAATATTGAATCTAATGAAGGAGGAGATCTCTCCTACCTTCAAAAGATTCTATTATTTCTCTCGTCCCAAAGACTCCATATTATAGCACAAGTTTCAGCCTGTCATCAAAGGACTCGTATTCCAAAGTTTCCTTGACGTGTAAGATTTAATTTTGATTCGATTCAATTTCTGCAGAACTATGGGATCTCAACAGGGATTTTATTTGTTGGTTGATATAATTAAATTTACCCCAATCCATCAGCTTTGACTTTTGGATTGATCGGTGGTTTAACATAATTCAACTGGGTAACTTACCTCAATCCATCAGCTTAAACTTTTGAATTGATTGGTGGCTTAACATAATTCACAATTATTAATCTTGGCTAGGTTTATATGTGAAAGCCAAGTTATGATTTTGATATAAATGTCACATACTACAGCTTTTCCTTCTCTATTTAATGTCTTTTTTTTTTGTTATTGACTAAAGGTATCTCATTCCTCGAGACATGTCTGTGGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGCATTTGTAAAGAACACTTTGCCTCAAACAGGTACGGTTTACATTCGAGCCGATACTGTTGCGTTCTTTACGTGCATTCTCGTGCAACAAGTCTTTTTAATGCTAGTTACCAACATGCTAAATAATTGACCTCAATTTTTGCGCAGCAAGCTTAATGAATACGGTTTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGCTGATCTGATTGAGATTTGTGAATGTTGAAATTTGTATATTTCTGCTACTCCTTTTGTCAATATATTCCATCAACAAATTTGTTTTCTCCTTGTGGATTTTATGTATAATGTGTATCTCGTTCTTAATATTGCAAATTCTGTCCAATTTAAATCGTGCAATTGTTTCATAACAAGGTAAGATGCAAACAAAAACAAAACACTTTCAGATCAGTGAAGTAGAAGAG

mRNA sequence

CTGATAACTCATAAATTTATGAAATGAGTGTGAATCTACCAACTAAGCCATCCCCACTTAACATTTTTCATTGGGCAAATGTATATCAAATTACTATTCATTTTAATTTCTTTTTATTTAGTTCATCTCGATCGAGAGGGCATTGCAAAGGGAGCTCTCTAATGGGGAAATCTAATTCTTTCAAGAACGAGTTCACCTACGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCCGTCATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTATCTCATTCCTCGAGACATGTCTGTGGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGCATTTGTAAAGAACACTTTGCCTCAAACAGCAAGCTTAATGAATACGGTTTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGCTGATCTGATTGAGATTTGTGAATGTTGAAATTTGTATATTTCTGCTACTCCTTTTGTCAATATATTCCATCAACAAATTTGTTTTCTCCTTGTGGATTTTATGTATAATGTGTATCTCGTTCTTAATATTGCAAATTCTGTCCAATTTAAATCGTGCAATTGTTTCATAACAAGGTAAGATGCAAACAAAAACAAAACACTTTCAGATCAGTGAAGTAGAAGAG

Coding sequence (CDS)

ATGAGTGTGAATCTACCAACTAAGCCATCCCCACTTAACATTTTTCATTGGGCAAATGTATATCAAATTACTATTCATTTTAATTTCTTTTTATTTAGTTCATCTCGATCGAGAGGGCATTGCAAAGGGAGCTCTCTAATGGGGAAATCTAATTCTTTCAAGAACGAGTTCACCTACGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCCGTCATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTATCTCATTCCTCGAGACATGTCTGTGGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGCATTTGTAAAGAACACTTTGCCTCAAACAGCAAGCTTAATGAATACGGTTTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

Protein sequence

MSVNLPTKPSPLNIFHWANVYQITIHFNFFLFSSSRSRGHCKGSSLMGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG

Homology

[Close]

BLAST of Sed0007896 vs. NCBI nr
Match: XP_023514864.1 (autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-56
Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRLRLAPGKALF FVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. NCBI nr
Match: XP_022954168.1 (autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo] >KAG7014281.1 Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.0 bits (580), Expect = 5.8e-56
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRL LAPGKALF FVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. NCBI nr
Match: KAG6575725.1 (Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.6 bits (579), Expect = 7.6e-56
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRL LAPGKALF FVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMETVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. NCBI nr
Match: XP_023004698.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFKNEF+YEQR  ESFEIL KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRLRLAPGKALF FVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. NCBI nr
Match: XP_022991717.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-55
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRL LAPGKALF FVKNTLPQT SLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot
Match: Q9LRP7 (Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.5e-43
Identity = 81/113 (71.68%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 52  SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 111
           SFK ++T ++R AES EI+AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI++
Sbjct: 3   SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62

Query: 112 LSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           LS RL L+PGKALF FV NTLPQTA+LM++VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 63  LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot
Match: Q8S925 (Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.8e-39
Identity = 71/113 (62.83%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 52  SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 111
           SFK++F+ ++R  ES  I+AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH+
Sbjct: 7   SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66

Query: 112 LSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           LS R++L P KALF FV NTLPQTAS M+++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 67  LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot
Match: Q2RBS4 (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D PE=3 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 7.4e-38
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 49  KSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQF 108
           K   FK EFT E+R  ES  ++A YPDR+PVIVE++ +   PEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 109 IHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDD-DGFLYMCYSSEKTFG 165
           I +L +RL L+PG ALF FV NTLPQTA LM +VYESYKD+ DGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.5e-34
Identity = 65/114 (57.02%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 51  NSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 110
           +SFK+E   E+R AE+  I  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++
Sbjct: 4   SSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVY 63

Query: 111 VLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           V+  R++L+P KA+F FVKN LP TA++M+ +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-33
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 52  SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 111
           SFK E   E+R AES  I  KY DR+PVIVE+ +K + PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 112 LSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           +  R++L+P KA+F FVKNTLP TASLM+ +YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0007896 vs. ExPASy TrEMBL
Match: A0A6J1GQC4 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.8e-56
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRL LAPGKALF FVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy TrEMBL
Match: A0A6J1JMM5 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.2e-56
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFK+EFTYEQRFAESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRL LAPGKALF FVKNTLPQT SLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy TrEMBL
Match: A0A6J1L0B7 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.2e-56
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFKNEF+YEQR  ESFEIL KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRLRLAPGKALF FVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy TrEMBL
Match: A0A6J1CW54 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGKS SFKNEFTYEQRF E+FEILAKYPDRVPVIVERY+KCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLS RL LAPGKALF FVKNTLPQTASLM++VYESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of Sed0007896 vs. ExPASy TrEMBL
Match: A0A6J1H7R2 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 108/118 (91.53%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 47  MGKSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 106
           MGK+ SFKNEF+YEQR  ESFEIL KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 107 QFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           QFIHVLSTRLRLAPGKALF FVKNTLPQTASLM+T YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0007896 vs. TAIR 10
Match: AT3G15580.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.2e-44
Identity = 81/113 (71.68%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 52  SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 111
           SFK ++T ++R AES EI+AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI++
Sbjct: 3   SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62

Query: 112 LSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           LS RL L+PGKALF FV NTLPQTA+LM++VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 63  LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Sed0007896 vs. TAIR 10
Match: AT3G06420.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 6.2e-40
Identity = 71/113 (62.83%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 52  SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 111
           SFK++F+ ++R  ES  I+AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH+
Sbjct: 7   SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66

Query: 112 LSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           LS R++L P KALF FV NTLPQTAS M+++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 67  LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Sed0007896 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 6.0e-35
Identity = 65/114 (57.02%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 51  NSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 110
           +SFK+E   E+R AE+  I  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++
Sbjct: 4   SSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVY 63

Query: 111 VLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           V+  R++L+P KA+F FVKN LP TA++M+ +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0007896 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 68/124 (54.84%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 42  KGSSLMGKSN-SFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIP 101
           K +SL+  +N SFK E   E+R  ES  I  KYPDR+PVIVER E+ + P ++KKKYL+P
Sbjct: 8   KENSLIAMANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVP 67

Query: 102 RDMSVGQFIHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSE 161
            D++VGQF++V+  R++L+  KA+F FVKNTLP TA++M+ +Y+  KD+DGFLYM YS E
Sbjct: 68  ADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGE 127

Query: 162 KTFG 165
            TFG
Sbjct: 128 NTFG 131

[Close]

BLAST of Sed0007896 vs. TAIR 10
Match: AT4G04620.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 65/116 (56.03%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 49  KSNSFKNEFTYEQRFAESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQF 108
           + NSFK     E R AES  I AKYP+RVPVIVE+  + + P+++KKKYL+P D+++GQF
Sbjct: 2   EKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQF 61

Query: 109 IHVLSTRLRLAPGKALFAFVKNTLPQTASLMNTVYESYKDDDGFLYMCYSSEKTFG 165
           ++V+  R++L   KA+F FVKNTLP TA+LM+ +YE +KD+DGFLYM YS E TFG
Sbjct: 62  VYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

The following BLAST results are available for this feature:

BLAST of Sed0007896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514864.1	1.5e-56	94.92	autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954168.1	5.8e-56	94.07	autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy...	[more]
KAG6575725.1	7.6e-56	94.07	Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023004698.1	1.7e-55	93.22	autophagy-related protein 8i-like [Cucurbita maxima]	[more]
XP_022991717.1	1.7e-55	93.22	autophagy-related protein 8i-like [Cucurbita maxima]	[more]

BLAST of Sed0007896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP7	4.5e-43	71.68	Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1	[more]
Q8S925	8.8e-39	62.83	Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1	[more]
Q2RBS4	7.4e-38	64.96	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D P...	[more]
Q9SL04	8.5e-34	57.02	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
Q2XPP5	1.4e-33	60.18	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]

BLAST of Sed0007896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQC4	2.8e-56	94.07	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=...	[more]
A0A6J1JMM5	8.2e-56	93.22	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1	[more]
A0A6J1L0B7	8.2e-56	93.22	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1	[more]
A0A6J1CW54	1.5e-54	90.68	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV...	[more]
A0A6J1H7R2	2.0e-54	91.53	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=...	[more]

BLAST of Sed0007896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15580.1	3.2e-44	71.68	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	6.2e-40	62.83	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	6.0e-35	57.02	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	1.1e-33	54.84	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	1.1e-33	56.03	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 37..164 e-value: 1.5E-48 score: 165.8
None	No IPR available	PANTHER	PTHR10969:SF81	AUTOPHAGY-RELATED PROTEIN	coord: 47..164
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 61..164 e-value: 4.0E-42 score: 142.6
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 47..164
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 52..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007896.1	Sed0007896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule