Sed0007874 (gene) Chayote v1

Overview


Name	Sed0007874
Type	gene
Organism	Sechium edule (Chayote v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	LG02: 51937938 .. 51941057 (+)
RNA-Seq Expression	Sed0007874
Synteny	Sed0007874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTCGCACCATAGCTTTCACCATTTCTCAAAAACCATGACAGTTTGCTCCTCACGTTCTTCTCTTCTACCAATCTTCTTCCTCATCGTTCTCGCCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGTCGACGCCGGAAAACGGAGAATCCACATCACCGACGATCTCGACGACGTGGTTGACGACGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTACCGATTTCGACCTTTCGCCGGCCGATTTGTCGAAGATGGAGCTTCCTGAGATCCAGGCTGAGATGATGAAGCGCCAAACTGGTCCGACGATGGGATTCGTTAAGCTTCGCCTCGGCGTTCGGCGGACTCCGGTAAGAAATTTCGCTAATCTCCGTAGTTTAGATGTTGAATTTAGTCCGGAAAGCGACGAACAATCTGATTGCTGCCGATTAAATTAGTTCCGGTTTCTTTAATGAAATGACATTTGTAATTCGAATGCAACTCGAATTTGAATTTTGAGGCTTAACGGATGTTGAAGTTGAAACCAAAAACCTTGAAAATCTCGATTAATTTGCGTGTTTTCTGTTAATTGGACGTGTTTAGGGCTTCTAATTGAAAGTTTCATTGAATAACGTCTTTACATGATCGCGTTTTACAGCCGTTTATCGCTCTTGGTTGATTTTAGTCCGGAAAGTGATGAATAATCTAATTGCTGCTGGTCGAATTGGCTCCAGTATGAAATTTCGGATAACCATTTTTAAAAAAAAAAAATTAAGCTTACAACGACCATGTTAGCATATGTTTTTTCTTACTTGAATATCTACCTCTCATGTATATTTGTAGAAATCAAATCAAAGTTGTAACTTCCAAAAAAATCTAAAACAACCCAATGGTTATCAAATGGGGCTTTAGATGTTAATTTTAGTCTTGAAAGTGAAGAATAATGTAATTGCTGCTGGTCAAATTGGTTCCGGTCTGTAACGAAATGATATTTTCAATTGGAATGCAAGTCGATTCTGGATTTTCAGCAGGGAATTTGTGTAAACGGATGCTAAAATTGAAACGAGAAACCTCGGAAATATCGATTAATTCGTGTGTTTTCTGCTGATTGAACGTGCATAGGGTTTCTAATTGAAAATTTCATTGACTAACGTCTTTACATGATCGTGTTTTACCGCCATTTATTGTTCTTGATCGTTTTCAGGACATGGTGGCTGGGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTGGAGTCGAGATTTACGGCGGTAGACCGTAGTACACTCATGTTCACCATGGACAGAGGACAAGACTTGGCTGAGGTACACTTTATTTAATTATATTCAATTCTAGAACCGAGATGCGAGATTCACTCGTGACATTAATTTGTAGACACCTCTCATGTCTTCGTTCCTTCAATGTGTCTTAGTGCCTAGCCTAGGGATGAGCGTGGTTACCGCAGGTATAGCAGAGCGAAACTCCGATTTCCAGGTTTCAAACAAAAAGAAAAATTCTAGAACCGAGACTCTTCAATTTTTCTCCAATTTGTCTGAGATAATTTTAACACACAGTTTTAGTTTATGGGATCAAATTCTGTAGCCTAAACACAATTCTGATCAGAACAGTTTTGGACCATTTTTAATTTTTTCATTGAAGTTTGGTTTTGAATTTCTTAAACTTTTTTATACTGTTTCTGTATCATCAAACTGTTCTCATTTGAGTTAAATTGATAGGCTGAGCTGAGACAACAAAGGCTCCAGGCCTCCATTTTCTGTTTTGTTGTTGATAATTTTATTTCTTCCCCTTTTTCTTAGTACAATAGTGATTGAGTAACTCAAATCACAGACATCTTGATTATTAACACTTGAGCTTTGCTCACTTTGACTTTATTTCTTCTTCCCTTTTAAGTATTGTTTAACTATTTTTGGTGGGTTTTAGTAGATCTGTTATCCATTTAATAAATTAAGTATAAAAATCGGCCATATAAGAAAGTGAAACTGAGCTCTCGATGATTATGAAGTTATCCTTGTAACCAGACTTATGTTGTTTGTCAAGAACTTGCTTCTAAGATTTATTTTATTCATGTCATTGGGGTAGAATAACTTCTTTATGCAAAAACTTTTTTAATGCAGAAACGCCATTTGTTTGTGTTTTTACATGTTTTTTCTCCTAAAATTACGCTTCATATACAAAACTATATTGATTCTCAATGTTTTGACTCAAATTTATGCTTCAACAAACAAACTAATAAAAATGAAAATGTTATACAAAGAACATCATTCAACACACCTAGTTTTGATCAAATCATTTCTGGGCTGTTCTCTGTTTTCATTTAGAAAAGTAACCCATCAAACAAAACTTTCTGAGTCGAAAAAACAGTTGATCGTTTTTTAAATGGATAGGAGTTCCCTAACATAGCTTTAAATGCTGTCCGCAAGGGGTGGCGCGGTGGTCGAAGGCTTGGGCTTTGAAGGTTTGCTCCTCCAAAAGTTTCAAGTTCGAGACTCACCTGTGACATTAATTTTTAGCACTTGTCTTCACTCCTTCAATGTCTCTTGGTGCCTGACTTAGGGACGGATGTGGTTACCCTAGGTATAGTAGAGTGAAACTCCGATTTTTCGGTTTCAAAAAAAAAAAAAGCTTCACATGCAGGAGAATAGCTTTCGAAAGTCATTTCTTGTTTTTTCAACTTTCTTTTTAATGTTATTTTTTGGTATACATTGTGAGAGCAGTTGAAGGAGTTCGTGTTGAGCCAGTCAGAGTCATACGAGGTCAAAATCGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCCATTGAGAAAGTCATTGAGATGCTCCAAAAAGAGAAGAACAAAGCTGGTGACACCAATCCTTCAGAAAAAGGCGAGCCATTGCATCAAGAATTGTAGAACTATTATGGTATCAAATCTTCAACTTTTAAACTGGGAATTTTGGATGTGTTAATTTGTTTAGCTTTTGAATCTTGCTGTAGTAATGGATGGAAATTTAGGGGAAATTAGTTCTTAATACAAGATATAGGAGGAATCATGAACTTCTTTTGATTTCGAGGTTAATAATAATATCAGTTGAACTATGCTACGCAAG

mRNA sequence

GACTCGCACCATAGCTTTCACCATTTCTCAAAAACCATGACAGTTTGCTCCTCACGTTCTTCTCTTCTACCAATCTTCTTCCTCATCGTTCTCGCCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGTCGACGCCGGAAAACGGAGAATCCACATCACCGACGATCTCGACGACGTGGTTGACGACGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTACCGATTTCGACCTTTCGCCGGCCGATTTGTCGAAGATGGAGCTTCCTGAGATCCAGGCTGAGATGATGAAGCGCCAAACTGGTCCGACGATGGGATTCGTTAAGCTTCGCCTCGGCGTTCGGCGGACTCCGGACATGGTGGCTGGGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTGGAGTCGAGATTTACGGCGGTAGACCGTAGTACACTCATGTTCACCATGGACAGAGGACAAGACTTGGCTGAGTTGAAGGAGTTCGTGTTGAGCCAGTCAGAGTCATACGAGGTCAAAATCGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCCATTGAGAAAGTCATTGAGATGCTCCAAAAAGAGAAGAACAAAGCTGGTGACACCAATCCTTCAGAAAAAGGCGAGCCATTGCATCAAGAATTGTAGAACTATTATGGTATCAAATCTTCAACTTTTAAACTGGGAATTTTGGATGTGTTAATTTGTTTAGCTTTTGAATCTTGCTGTAGTAATGGATGGAAATTTAGGGGAAATTAGTTCTTAATACAAGATATAGGAGGAATCATGAACTTCTTTTGATTTCGAGGTTAATAATAATATCAGTTGAACTATGCTACGCAAG

Coding sequence (CDS)

ATGACAGTTTGCTCCTCACGTTCTTCTCTTCTACCAATCTTCTTCCTCATCGTTCTCGCCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGTCGACGCCGGAAAACGGAGAATCCACATCACCGACGATCTCGACGACGTGGTTGACGACGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTACCGATTTCGACCTTTCGCCGGCCGATTTGTCGAAGATGGAGCTTCCTGAGATCCAGGCTGAGATGATGAAGCGCCAAACTGGTCCGACGATGGGATTCGTTAAGCTTCGCCTCGGCGTTCGGCGGACTCCGGACATGGTGGCTGGGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTGGAGTCGAGATTTACGGCGGTAGACCGTAGTACACTCATGTTCACCATGGACAGAGGACAAGACTTGGCTGAGTTGAAGGAGTTCGTGTTGAGCCAGTCAGAGTCATACGAGGTCAAAATCGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCCATTGAGAAAGTCATTGAGATGCTCCAAAAAGAGAAGAACAAAGCTGGTGACACCAATCCTTCAGAAAAAGGCGAGCCATTGCATCAAGAATTGTAG

Protein sequence

MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKEWGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAMQWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPGDPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL

Homology

[Close]

BLAST of Sed0007874 vs. NCBI nr
Match: XP_023540100.1 (uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 178/214 (83.18%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKD GFNRF + G+RRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV S  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. NCBI nr
Match: XP_022942170.1 (uncharacterized protein LOC111447309 [Cucurbita moschata])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 178/214 (83.18%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKDAGFNRF + G+RRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV S  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. NCBI nr
Match: KAG6597131.1 (hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028598.1 hypothetical protein SDJN02_09779, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.5 bits (916), Expect = 8.3e-95
Identity = 177/214 (82.71%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKD GFNRF + G+RRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV S  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. NCBI nr
Match: XP_022974607.1 (uncharacterized protein LOC111473291 [Cucurbita maxima])

HSP 1 Score: 354.8 bits (909), Expect = 5.4e-94
Identity = 176/214 (82.24%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKD GFNRF + G+RRI ITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV +  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. NCBI nr
Match: XP_038902444.1 (uncharacterized protein LOC120089088 [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 7.3e-91
Identity = 175/214 (81.78%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C SRSS  P+F LIVLAAGIFKDAGFNRF D G+RRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSRSS-RPVFILIVLAAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL PADLS ME  EIQAEM  R  GPTMGFVKLRLGVRRTPDMVA IAM
Sbjct: 61  WGKKKSASSDFDLPPADLSNMEFQEIQAEMTNRHFGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWT+VLKTGSVE++F AVD +TLMFTM+RG+DL ELKEFVLSQS+SYE+KIG+QVFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMERGRDLNELKEFVLSQSQSYEIKIGDQVFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIE+LQKEKNKAG T  SEK EPLHQEL
Sbjct: 181 DPPLEEVIELLQKEKNKAGGTGSSEKAEPLHQEL 213

[Close]

BLAST of Sed0007874 vs. ExPASy TrEMBL
Match: A0A6J1FVR6 (uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC111447309 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 178/214 (83.18%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKDAGFNRF + G+RRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV S  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. ExPASy TrEMBL
Match: A0A6J1IAQ9 (uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 176/214 (82.24%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C S SSLLP+FFLIVL AGIFKD GFNRF + G+RRI ITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS+DFDL P DLSKMELPEIQAEMMKRQ+GPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWTR+LKTGS+E++F AVD STLMFT+DRGQDL ELKEFV +  ESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VIEMLQK+KNKA DTNPSE  EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. ExPASy TrEMBL
Match: A0A5A7TZI6 (Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004750 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.8e-91
Identity = 168/214 (78.50%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C SRSS LP+F LIV+A GI KDAGFNRF D G+RRIHITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKS S+DFD+ PADLSKM+ PEIQAEMMKR +GPTMGFVKLRLGVRRTPDMVA IAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWT+VLKTGSV+++F AVD +TLMFTMDRGQDL ELKEFVLSQ+ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VI++LQK+KNKA  T PSE  EPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of Sed0007874 vs. ExPASy TrEMBL
Match: A0A1S3AVD9 (uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.8e-91
Identity = 168/214 (78.50%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C SRSS LP+F LIV+A GI KDAGFNRF D G+RRIHITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKS S+DFD+ PADLSKM+ PEIQAEMMKR +GPTMGFVKLRLGVRRTPDMVA IAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWT+VLKTGSV+++F AVD +TLMFTMDRGQDL ELKEFVLSQ+ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VI++LQK+KNKA  T PSE  EPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of Sed0007874 vs. ExPASy TrEMBL
Match: A0A0A0L7G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.6e-89
Identity = 165/214 (77.10%), Postives = 189/214 (88.32%), Query Frame = 0


Query: 1   MTVCSSRSSLLPIFFLIVLAAGIFKDAGFNRFVDAGKRRIHITDDLDDVVDDEEDESWKE 60
           M +C SRSS LP+F LIV+AAGI  D GFNRF D G+RR+HITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASTDFDLSPADLSKMELPEIQAEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAM 120
           WGKKKSAS DFD+ PADLSKM++PEIQAEMMKR +GPTMGFVKLRLGVRRTPD VA IAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTRVLKTGSVESRFTAVDRSTLMFTMDRGQDLAELKEFVLSQSESYEVKIGEQVFRRPG 180
           QWT+VLKTGSVE++F AVD +TLMFTMDRGQDL EL EFVLSQ+ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPIEKVIEMLQKEKNKAGDTNPSEKGEPLHQEL 215
           DPP+E+VI++LQK+KNKA  T  S+  EPLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214

[Close]

BLAST of Sed0007874 vs. TAIR 10
Match: AT2G46000.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-51
Identity = 106/187 (56.68%), Postives = 130/187 (69.52%), Query Frame = 0


Query: 28  GFNRFVDAGKRRIHITDDLDDVVDDEEDESWKEWGKKKSASTDFDLSPADLSKMELPEIQ 87
           GF R  +A KRRI I+DDLDDV D+EEDESWKEWG KK+ + +FD  P D + M   +IQ
Sbjct: 24  GFVRIAEATKRRIEISDDLDDVEDNEEDESWKEWG-KKATTPEFD-PPPDFTNMGFDQIQ 83

Query: 88  AEMMKRQTGPTMGFVKLRLGVRRTPDMVAGIAMQWTRVLKTGSVESRFTAVDRSTLMFTM 147
            EM KR  G  +GFVKLRLGV RT D+V  IAM+WT+VL+TG +  RF AVDRST+MF M
Sbjct: 84  EEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVLRTGGIGVRFMAVDRSTVMFNM 143

Query: 148 DRGQDLAELKEFVLSQSESYEVKIGEQVFRRPGDPPIEKVIEMLQKEKNKAGDTNPSEKG 207
             G+ + EL+EFVLSQ E+YEVKIG+Q FRRPGDPP E V +  Q E+ K  +     K 
Sbjct: 144 QNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFEDVFDKFQAEQRKDHEDGDGNKN 203

Query: 208 EPLHQEL 215
           +    EL
Sbjct: 204 DLTKDEL 208

The following BLAST results are available for this feature:

BLAST of Sed0007874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540100.1	2.8e-95	83.18	uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo]	[more]
XP_022942170.1	2.8e-95	83.18	uncharacterized protein LOC111447309 [Cucurbita moschata]	[more]
KAG6597131.1	8.3e-95	82.71	hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022974607.1	5.4e-94	82.24	uncharacterized protein LOC111473291 [Cucurbita maxima]	[more]
XP_038902444.1	7.3e-91	81.78	uncharacterized protein LOC120089088 [Benincasa hispida]	[more]

BLAST of Sed0007874 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0007874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVR6	1.4e-95	83.18	uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC1114473...	[more]
A0A6J1IAQ9	2.6e-94	82.24	uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291...	[more]
A0A5A7TZI6	7.8e-91	78.50	Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3AVD9	7.8e-91	78.50	uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=...	[more]
A0A0A0L7G1	5.6e-89	77.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1	[more]

BLAST of Sed0007874 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46000.1	6.0e-51	56.68	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019330	LRP chaperone MESD	PFAM	PF10185	Mesd	coord: 51..177 e-value: 1.8E-5 score: 24.7
None	No IPR available	GENE3D	3.30.70.260		coord: 84..178 e-value: 2.1E-13 score: 52.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..214
None	No IPR available	PANTHER	PTHR36357:SF1	OS03G0148300 PROTEIN	coord: 21..213
None	No IPR available	PANTHER	PTHR36357	OS03G0148300 PROTEIN	coord: 21..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007874.1	Sed0007874.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005783	endoplasmic reticulum