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Sed0007752 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGGCGAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTTCTGAGAGTAAAGGCGTTGATTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGAGTCTATGGCTCCTAAGAAATGGGTGCGTTTATCCTATGAAAAACTGCCTGAGTTCTGTCGAGGTTGTGGAAGAGTCGGCCATTTAGCGATGAATTGCAGTTATGTGGTCATTGGTGAGGGTATCCCATTTCCTTTTGGAGAGGAGTTGAGAGAACCAACAAGCCATTTTAGGGGAGAAAAACCTTTAATTCAGAGACAAGGAGGACAAGGAAGAGGTGGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAGGCTGTTGCTGCACCAGCAAGGGAGGAGAGGCAGTTTCCGATGGATCTTGAGCGGAGAATGGCCGGAAACGACTACTCGGGTGCTGCCTCGAGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGCTTTGCAGAATTTGGGGGCAAGTCAGGTACGGAACTGGAAGATGGTATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACGTGGCGGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTCTTATGGAAGGGAGGAATGAATTACTATTTGGCCCTTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAATGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAACATGATATCGCAGGTATTGAAAAGGTTGAAAATGGAAAAAGAGCTAGGCTTTCATGCATTGAGTCAGTCAATGGGATATCGGCGGAGACTGTTGAACAGTCTCGCCGGACTCAATGAAAACCCTATGTTGGAACGCTTGGGGGTTGAAAAATTCCCGAGCCACTAGGGCACTTCGTCACGAAGTGCTCAAGATTAGACCGAATATTGTGTTTGTCTGCGAAACTAAGTGTGGTGAGAAAGCTCTGGATAGATTGAAAGCTAGTTTGGATTTTGATTGTTGCTTCTGTGTCCCTTGCGTTGGCCTTAGCGGGGGTTTGATGATTTTCTGGAAGTCTTTGTTATATGTTAGAGCTTGTTCTTACTCTCAAGGTCACATTGATATCCTAATCAATGACCCTTTGGAGAGTTGGAGATTTACGGGCTTCTACGGGAATCCGATTACAAAGTTGCGAGAAGATTTCTGGAATCTTTTGAGGAGGTTGGCTGAGTGCTCGAGGTTACCTTGGCTTTTGGGAGGGGATTTTAATGAGGTTTTAGATTTTGATGAGCAGCTGAATGGTTCGATGAGAAACAAGTCAGGTATGGTTGCGTTCAGGGAAGTCATTAATGAGTGCTCGCTCATTGATCTGGGCTTCTCCGGAGATAAATTTACGTGGATTAAAAACAAATATTCTGATTCGGCAACTAGGGTACGTCTCGACAGGTATTTCGCTAATCCTTACTTTATTTCTAAAGCTGGTAAGATTTCTATTTTTCATTTTAGTTTCCACTCTTCAGACCATAGAGTTATTACTTCCGAGTTTAGATGGGAAAGTGAGAGCTCTAACGTCTGTGCTTTCTCCAAAAATCTTACAAGGTTTGAAGATGGGTGGGTTAATTTTAGTGATTGTAAAGAGGTTTTGAAGAAGAATTGGATCATGAGAGAAGATAGGGGAAACGGTGCCTCAAATCTTATGATATGTATTAGAGGATGCTTAA ATGATAGGCGAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTTCTGAGAGTAAAGGCGTTGATTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGAGTCTATGGCTCCTAAGAAATGGGTGCGTTTATCCTATGAAAAACTGCCTGAGTTCTGTCGAGGTTGTGGAAGAGTCGGCCATTTAGCGATGAATTGCAGTTATGTGGTCATTGGTGAGGGTATCCCATTTCCTTTTGGAGAGGAGTTGAGAGAACCAACAAGCCATTTTAGGGGAGAAAAACCTTTAATTCAGAGACAAGGAGGACAAGGAAGAGGTGGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAGGCTGTTGCTGCACCAGCAAGGGAGGAGAGGCAGTTTCCGATGGATCTTGAGCGGAGAATGGCCGGAAACGACTACTCGGGTGCTGCCTCGAGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGCTTTGCAGAATTTGGGGGCAAGTCAGGTACGGAACTGGAAGATGGTATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACGTGGCGGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTCTTATGGAAGGGAGGAATGAATTACTATTTGGCCCTTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAATGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAACATGATATCGCAGAGGATGCTTAA ATGATAGGCGAATTTATTGGATGGGACTATGAAGGGGATCAAAGAAATAGGGGAAAATTTCTGAGAGTAAAGGCGTTGATTGACATTCGTTTACCTTTGAGAAGAGCCTTGAAATTGAAGAGCGAGTCTATGGCTCCTAAGAAATGGGTGCGTTTATCCTATGAAAAACTGCCTGAGTTCTGTCGAGGTTGTGGAAGAGTCGGCCATTTAGCGATGAATTGCAGTTATGTGGTCATTGGTGAGGGTATCCCATTTCCTTTTGGAGAGGAGTTGAGAGAACCAACAAGCCATTTTAGGGGAGAAAAACCTTTAATTCAGAGACAAGGAGGACAAGGAAGAGGTGGCGGAAGAGGTCGAGAAGAAGATGTTCGAGCAGAAAACTCATGGTGTGGAGAAGATCTTGCAGAGGAAGAGGCTGTTGCTGCACCAGCAAGGGAGGAGAGGCAGTTTCCGATGGATCTTGAGCGGAGAATGGCCGGAAACGACTACTCGGGTGCTGCCTCGAGAGCTCGCGATTCGAAAGGTCAAATTCAATCTGAGGGCTTTGCAGAATTTGGGGGCAAGTCAGGTACGGAACTGGAAGATGGTATTATCAGAAGGGAAAATCGTGAAAAATTTGGAGGAAATAAGGGACACGTGGCGGAGGATGATAAGGTCGTAACTAATGAAAAGGGGAAAAGTAAAGTTCTTATGGAAGGGAGGAATGAATTACTATTTGGCCCTTTTGATATTCATATAAAAACCCATGATGGATTTGATTTTAAAAAGTCAGAGCATGGGCAAGCTAAAGGAATTAAAATAAAAGAGGTGGGGCCTGATGCTTTCAATTTAAATAAAGAGTTTAAAGGGAATTTTAAAATTCCTTTAGTTCATGTTGAGCCAGATTTTAAGTGTTTTAATGGGCCACTTTTTAAAGTGACTTTGGAGGAGAATGAAAATCCTTTTGTTCCTCAACAAAAAATTATGTCTTCTGCTGCAGAAAAGTTGATTGATTTTGAATTTGATCCAAAAAAATTAGCTTCCAAAAATAATAAAAGGTTTGTTATTAGAGATGATGAGGGACTATTAAAAATGGAAAAATCTTTAAGGAAAAATAAGGAATTGGATTATGAAGGAGAGGAGAGTGGTGGGAAGAAAGAATGTGAGAAGCTTTCAGTAATCAAATGGAAGAGACGTGCTCGGCAAGGAGAGAGGCATTTAGAATCTTCAACTAATTGTGTATTGAAAAAGGAAGATGGGCTAATTGGAAAAAAACATGATATCGCAGAGGATGCTTAA MIGEFIGWDYEGDQRNRGKFLRVKALIDIRLPLRRALKLKSESMAPKKWVRLSYEKLPEFCRGCGRVGHLAMNCSYVVIGEGIPFPFGEELREPTSHFRGEKPLIQRQGGQGRGGGRGREEDVRAENSWCGEDLAEEEAVAAPAREERQFPMDLERRMAGNDYSGAASRARDSKGQIQSEGFAEFGGKSGTELEDGIIRRENREKFGGNKGHVAEDDKVVTNEKGKSKVLMEGRNELLFGPFDIHIKTHDGFDFKKSEHGQAKGIKIKEVGPDAFNLNKEFKGNFKIPLVHVEPDFKCFNGPLFKVTLEENENPFVPQQKIMSSAAEKLIDFEFDPKKLASKNNKRFVIRDDEGLLKMEKSLRKNKELDYEGEESGGKKECEKLSVIKWKRRARQGERHLESSTNCVLKKEDGLIGKKHDIAEDA Homology
BLAST of Sed0007752 vs. NCBI nr
Match: XP_039815364.1 (uncharacterized protein LOC120678302 [Panicum virgatum]) HSP 1 Score: 79.3 bits (194), Expect = 8.7e-11 Identity = 70/223 (31.39%), Postives = 99/223 (44.39%), Query Frame = 0
BLAST of Sed0007752 vs. NCBI nr
Match: XP_039827601.1 (uncharacterized protein LOC120689378 [Panicum virgatum]) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-10 Identity = 88/306 (28.76%), Postives = 130/306 (42.48%), Query Frame = 0
BLAST of Sed0007752 vs. NCBI nr
Match: OQU92454.1 (hypothetical protein SORBI_3001G347001 [Sorghum bicolor]) HSP 1 Score: 72.0 bits (175), Expect = 1.4e-08 Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Sed0007752 vs. NCBI nr
Match: EOY19851.1 (Zinc finger, CCHC-type-like protein [Theobroma cacao]) HSP 1 Score: 71.6 bits (174), Expect = 1.8e-08 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Sed0007752 vs. NCBI nr
Match: TVU42476.1 (hypothetical protein EJB05_08883, partial [Eragrostis curvula]) HSP 1 Score: 71.6 bits (174), Expect = 1.8e-08 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Sed0007752 vs. ExPASy TrEMBL
Match: A0A803LAB8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Sed0007752 vs. ExPASy TrEMBL
Match: A0A1Z5S941 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347001 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.7e-09 Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Sed0007752 vs. ExPASy TrEMBL
Match: A0A061FRZ1 (Zinc finger, CCHC-type-like protein OS=Theobroma cacao OX=3641 GN=TCM_045227 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.7e-09 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Sed0007752 vs. ExPASy TrEMBL
Match: A0A5J9W3H8 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08883 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.7e-09 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Sed0007752 vs. ExPASy TrEMBL
Match: A0A2T7EQ43 (CCHC-type domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G170400 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-08 Identity = 46/125 (36.80%), Postives = 60/125 (48.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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