Sed0007744 (gene) Chayote v1

Overview


Name	Sed0007744
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type domain-containing protein
Location	LG12: 883103 .. 886953 (-)
RNA-Seq Expression	Sed0007744
Synteny	Sed0007744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACATCGCCGCCGATTTCTTGGTTTGTTTCCAATTTCATCGATTCAAGTTGTGTTCATGTTTCGTTGCGTTTGTTCTTGATCGAATCGTTCTGGATCGCCTTTGTTCTTGTTTTCAGCTTTTGGGGTTTTGTTTCTGTTGTTTGCTAATGATTCTGTGATCTGGGTTTGGCTTGTTTTGCTGATTTGTGGATTCAATTTGTGTTGGGAGTGGAATTTTTTTCATCATTGTTCTTGGTTGGAGCTGATTCTGTTATTTGTGTTGTGAAAGACTAAAAGGGGTTTGTTTACTACATGACATTTGGTTTTTGAAAATTAAGATTGTTTTCTCCTAATTTCTCTACCATAGTTTTTGTCACACTATATGAAGCATTTGAATTCATAGCCAAATATCATAAATGAAAACAAAATTTTGTAAGCTACTGTTTTTTCTTTAATTCAACTATGATGGGAGGTAGATGGATTCGAACTCATGAACTTTTTGTTCACTAATATGACTTGGTTTTTGAATTCATATATGCTAAATAGATAACAAGACAATGAAATCCATATGTGACGTTTAAAAACAAAAAATAAATTGGTCATCAAACGAGTCTAAGTGTTTGGTTTTGCACTTTTAAACATCATTTCATACTATTAAAATTGATGTTGGATTATCAAGGACATGTTTGAGAGTGATTTTGAATAAAACAAAGTGACTTTAACGGTTTCAAAATAACTTAAAATCGTTGGTGGAGCTCTAGCTCTAGTGGATGAGCAAATGGTGGTGGTGGTGGAAGCAAAAATGTGAATGGTTCATTGATTCTAACTCTTATGAAGTGTACTTTAATGGCTACCTTTGAAACGTCCTTTCTGCCAAAGGTTTCTCTATTATCTTTTCAATCTTGGTTGTCAGTGGAAACAAGGTTAACAGGGCATTTGTTTTGGAAAATTGACTTCTCAATTCCATGTTGTTTTCATTCATTTACTTTACCAAATCAAAGTCCAATTGAGACAATATCTATGCTTATGGGATAACTCAATTGACCAAGTTAAATTGATTTGAAATTCCAATTTTACCACTCCCATTTGCATCATACATTTTTTTTTTTTTAAACAAGGATAACCATGCCCGTCCCTAGGCCAGGCACCCGGGAGACATCGAAGGAGTAATGTCACAGCTGAGTCTCGAACCTAGGACCTTGAGGGGAGCATACCCTCAAAACCTAAGTCTTCAACCACTTTGCCACCCCTTAGAGACTTTGCATCATACATATTTATTATGAGTTATTCGGTGGCTATTTGCAGTATGATTTAAACCGTAAGTCTAGCTGATTTGAGTCAACCATATCAAGTTTAAGTCCCCCATCTCCACCTATATCCTTAATGAAAAAAAAGGCGGTACCTAATTTGGTTCATTACGCTTGAATCTTGATGCTAAGATGTTTGGTAGTATTGTGTAATTTGGCTGTCTGATTGTAAAGTCTAGTTTATTTAAAATTTCATCCATTGTTTATATCTATCTGTTTTTTTAGTTCAACAACATTATTTGCAAGTTGGAAGATTCGAACCTGTGACCAATTTAGGATACATGCTAATTACCGCTGAGTCTAGCTCACTTTTGGCGAGATTTATGGGGGTCTTGTGCATTATTGGCTAGAGTTTCTTTCTCTTTCCAACCAGAAATACTTGCCCTCATTAGTCTGTATTATTGTGATATTGAATCTGATTTACAGTACAAATATATTGCGGTTGTTGGGCTAATGATGTTGTCATTGGTTCATTTTGGAACTCTGAGTCATGAGCTAAGCCTTGTTCATTAACCAGACCAGACCTTTTGGAAGCCATGATCATAGTCATGTTAGAGGAAAACCAGTCCTTTTTGGTGCTTTAGTCTTTAGAATGTGCATGGTTTTATTTTCACATTGATGAAACAGAATTTTGCTCCTAGGTCTTCAAGTTGTAGACTGGGTTCCTTATCTTATAATGCTCACTGGATTAGGTCTCAGCTTTGATGCTTTATGTCTGTATTTGCTGTCGATCTGTATCGCTATTTTTCCATTTTTTTCGTTCTTGACATCTAATGTGCAACTCTATGCCAGATAACAGGAAACCATGTTTTAACAGTTGCTGGTAAGATCAGAGAAATCATCATAGAATGGGAGGCTGCTGCTGTTCGTCTCGAAAATATCATGTGAATGGAACTCCAGCATACTACTATGTTAGTTCATTTGCCTTTCAAGATGATCATGACCAATTATTGCATAAGTTTTCCTTGCCAATACTAAGTTCCAAAAATTTTACTCTTTCTGCAGTGCCCGCTGGCTATGGAGGAGCGAGAGCCATCCGGAAATCTTAGTGGCTCCATGCTCCTCAATGCAGGACATGATTTGAACCTGGATTTTTCAATACCGAACACGTATCGAGCACCCCCCACACCTCTCCCGTATGATGTGGTTTTGAGATGTTCACAACCAAAGACAGCCCTTTGCTTGGAGGCCCTCCATGAAAACTGTGGTGTTAAAACTTCATCAGCAGTGAAAATTGTTGGGAAACTGGATAGTAAGTCCCAAGACAGTCCTTTGCTTGGAGGCCCTCCACGAAAACTGGAACATTCAAAGTCGAAAGGAAATAATACTCCGACTCCGGTTGTCGAAGAAGAAGATGTCTGTCCCATTTGTCTCGAAGGTGAGCTGGATCGATCACCTCGATTCTGCATCATTTTTCTTTTTATTCCTAGTACTTATTAACTTAGATTTAATCCATAATTCATGTGTAAGTCTAACACTATATCTGCTATGTAGAGTATGATTCACAACATCCAGAAATTATCACAAAATGCAAGCACCACTTTCACCTTGCTTGCCTTCTTGAGTGGACCGAAAGAAGTGATGCCTGTCCGATCTGCGACAAGGTTTGTTCTAACAAATCACAAACATGTAGATCAAATTCGAGTTTTGATTTCGCTAACTAAAAATGGCTGTGGAAAAAATCTTATTTTCTTTTATTAATAGCATACAGCCTCAATCTCATGCTAGTAACTAAAACGTGAAGCAACATTGTCTGTTATTTGCATTGCCATAGATCATATCATGATTTTCCACGTTCTTTGATTTGTTCGTACTCGCAAATCTGATTAAAGTTTCTGTTCCATTTCGATACAGGAGATGATATTTAAGCTACCTTGAGTCTGCAAAAATGAAGAACTTCTCTAGTCCTTAGAATTCAAACTTGAACTAAGTTCACCACTGGAGTATGGTGATTTTCCTTGTTCAGTTACAGGTTCATTTTCAAAACTATGGCTGTATATAAACATCGATCACTCGTAGCTGCAAATTTGAAATGTAAATTGCTGTTGTCAGTCGATTTGATACATCAGGGAAGAAATAACGCTATGATACAACAGTGCTTCCTCATGTTGTTGGATCTTCATGCATATTTAATTATTATATTTTAATCTTTGATGATCAATTATGAAGGAACTCTTCTTGGCTTATAGACTCAGAAAAGGAGTATTAGACATTTATACATTCTCTGTAAAGATGAGATCTCTTTCTCATATGGGCTTTTGAGAATCTTGCATGTAAATGTTTCTCAAATCATATCTTCTCCAGTTTTGTGATATATTTAAACTTTTTGGTAAAGTAATCTAACATTAGTATCTTTTTTTTTTTTTTGCGTGG

mRNA sequence

AAAACATCGCCGCCGATTTCTTGGAAACCATGTTTTAACAGTTGCTGGTAAGATCAGAGAAATCATCATAGAATGGGAGGCTGCTGCTGTTCGTCTCGAAAATATCATGTGAATGGAACTCCAGCATACTACTATTGCCCGCTGGCTATGGAGGAGCGAGAGCCATCCGGAAATCTTAGTGGCTCCATGCTCCTCAATGCAGGACATGATTTGAACCTGGATTTTTCAATACCGAACACGTATCGAGCACCCCCCACACCTCTCCCGTATGATGTGGTTTTGAGATGTTCACAACCAAAGACAGCCCTTTGCTTGGAGGCCCTCCATGAAAACTGTGGTGTTAAAACTTCATCAGCAGTGAAAATTGTTGGGAAACTGGATAGTAAGTCCCAAGACAGTCCTTTGCTTGGAGGCCCTCCACGAAAACTGGAACATTCAAAGTCGAAAGGAAATAATACTCCGACTCCGGTTGTCGAAGAAGAAGATGTCTGTCCCATTTGTCTCGAAGAGTATGATTCACAACATCCAGAAATTATCACAAAATGCAAGCACCACTTTCACCTTGCTTGCCTTCTTGAGTGGACCGAAAGAAGTGATGCCTGTCCGATCTGCGACAAGGAGATGATATTTAAGCTACCTTGAGTCTGCAAAAATGAAGAACTTCTCTAGTCCTTAGAATTCAAACTTGAACTAAGTTCACCACTGGAGTATGGTGATTTTCCTTGTTCAGTTACAGGTTCATTTTCAAAACTATGGCTGTATATAAACATCGATCACTCGTAGCTGCAAATTTGAAATGTAAATTGCTGTTGTCAGTCGATTTGATACATCAGGGAAGAAATAACGCTATGATACAACAGTGCTTCCTCATGTTGTTGGATCTTCATGCATATTTAATTATTATATTTTAATCTTTGATGATCAATTATGAAGGAACTCTTCTTGGCTTATAGACTCAGAAAAGGAGTATTAGACATTTATACATTCTCTGTAAAGATGAGATCTCTTTCTCATATGGGCTTTTGAGAATCTTGCATGTAAATGTTTCTCAAATCATATCTTCTCCAGTTTTGTGATATATTTAAACTTTTTGGTAAAGTAATCTAACATTAGTATCTTTTTTTTTTTTTTGCGTGG

Coding sequence (CDS)

ATGGGAGGCTGCTGCTGTTCGTCTCGAAAATATCATGTGAATGGAACTCCAGCATACTACTATTGCCCGCTGGCTATGGAGGAGCGAGAGCCATCCGGAAATCTTAGTGGCTCCATGCTCCTCAATGCAGGACATGATTTGAACCTGGATTTTTCAATACCGAACACGTATCGAGCACCCCCCACACCTCTCCCGTATGATGTGGTTTTGAGATGTTCACAACCAAAGACAGCCCTTTGCTTGGAGGCCCTCCATGAAAACTGTGGTGTTAAAACTTCATCAGCAGTGAAAATTGTTGGGAAACTGGATAGTAAGTCCCAAGACAGTCCTTTGCTTGGAGGCCCTCCACGAAAACTGGAACATTCAAAGTCGAAAGGAAATAATACTCCGACTCCGGTTGTCGAAGAAGAAGATGTCTGTCCCATTTGTCTCGAAGAGTATGATTCACAACATCCAGAAATTATCACAAAATGCAAGCACCACTTTCACCTTGCTTGCCTTCTTGAGTGGACCGAAAGAAGTGATGCCTGTCCGATCTGCGACAAGGAGATGATATTTAAGCTACCTTGA

Protein sequence

MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSGSMLLNAGHDLNLDFSIPNTYRAPPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRKLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFKLP

Homology

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BLAST of Sed0007744 vs. NCBI nr
Match: XP_022147277.1 (probable E3 ubiquitin-protein ligase RHB1A [Momordica charantia])

HSP 1 Score: 312.0 bits (798), Expect = 3.5e-81
Identity = 148/190 (77.89%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG--SMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK HVNGTP YYYCPLAMEERE S   SG  SMLLNAGHD +LD SIPNTYR
Sbjct: 1   MGGCCCSTRKSHVNGTPVYYYCPLAMEERESSEIRSGSASMLLNAGHDSDLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD+V RC Q K    ++     C  KTS A KIVG+ D+KSQDSPLLGGPPRK
Sbjct: 61  APPTPLPYDMVFRCPQSKDFNSIKETICGCSFKTSPAAKIVGEPDNKSQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           LEHSK KGNNTPT V EEED CPICLEEYDS+HPE ITKCKHHFHLACLLEWTERSDACP
Sbjct: 121 LEHSKLKGNNTPTLVAEEEDACPICLEEYDSEHPESITKCKHHFHLACLLEWTERSDACP 180

Query: 181 ICDKEMIFKL 189
           ICD+EMIF+L
Sbjct: 181 ICDEEMIFEL 190

[Close]

BLAST of Sed0007744 vs. NCBI nr
Match: XP_022980128.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima] >XP_022980129.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima] >XP_022980130.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 6.0e-81
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK H +GTPAYYYCPL+MEERE S     S SMLL AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRKSHSDGTPAYYYCPLSMEERESSEIHGGSASMLLGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C QPK     +     C  KTSSA+KIVG+LD K QDSPLLGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQPKDLNSFKETKCGCSFKTSSALKIVGELDCKFQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTPTPV EEEDVCPICLEEY S+HPEIITKCKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPTPVTEEEDVCPICLEEYGSEHPEIITKCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 190

[Close]

BLAST of Sed0007744 vs. NCBI nr
Match: XP_022924496.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata] >XP_022924497.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata] >XP_022924498.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 146/191 (76.44%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK   +GTPAYYYCPL+MEERE S     SGSML+ AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRK--SDGTPAYYYCPLSMEERESSEIHGGSGSMLIGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C QPK     +     C  KTSSA+KIVG+LD K QDSPLLGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQPKDLNSFKETKCGCSFKTSSALKIVGELDCKFQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTP+PV EEEDVCPICLEEY S+HPEIITKCKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPSPVTEEEDVCPICLEEYGSEHPEIITKCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 188

[Close]

BLAST of Sed0007744 vs. NCBI nr
Match: KAG6582620.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 145/191 (75.92%), Postives = 156/191 (81.68%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK   +GTPAYYYCPL+MEERE S     S SMLL AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRK--SDGTPAYYYCPLSMEERESSEIHGGSASMLLGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C QPK     +     C  KTSSA+KIVG+LD K QDSP LGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQPKDLNSFKETKCGCSFKTSSALKIVGELDCKFQDSPFLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTP PV EEEDVCPICLEEY S+HPEIITKCKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPCPVTEEEDVCPICLEEYGSEHPEIITKCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 188

[Close]

BLAST of Sed0007744 vs. NCBI nr
Match: XP_023527676.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo] >XP_023527677.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo] >XP_023527678.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 4.5e-76
Identity = 143/191 (74.87%), Postives = 156/191 (81.68%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK   +GTPAYYYCPL+MEERE S     S S+LL AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRK--SDGTPAYYYCPLSMEERESSEIHGGSASILLGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C Q K     +     C  KTSSA+K VG+LD K QDSPLLGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQLKELNSFKETKCGCSFKTSSALKTVGELDCKFQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTPTPV EEEDVCPICLEEY S+HPEIIT+CKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPTPVTEEEDVCPICLEEYGSEHPEIITQCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 188

[Close]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG---SMLLNAGHDLNLDFSIPNTY 60
           MGGCC SSRK H+ GTP YYYCP + EE  PSG  +G   +       D+ L+ SIP+T+
Sbjct: 1   MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60

Query: 61  RAPPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPR 120
            A P PLPYD++L   Q   +  ++        +T +  + +G+ D K+  S ++   PR
Sbjct: 61  CA-PAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILS-PR 120

Query: 121 KLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           K + SK +G      V EEED CPIC E+YD ++P + TKC+H FHL+CLLEW ERSD C
Sbjct: 121 KSDFSKHQG--LKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRC 180

Query: 181 PICDKEMIF 187
           PICDKE++F
Sbjct: 181 PICDKEVVF 185

[Close]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 135 EEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIF 187
           E+EDVCP CLEEY S++P+I+TKC HHFHL+C+ EW ERS+ CP+C K M F
Sbjct: 176 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEF 227

[Close]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.2e-16
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 135 EEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACPICDKEMI 186
           E  D CPICLEEY+  +P+++TKC H FHLAC+L W ERS+ACP+CDKE++
Sbjct: 99  EAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELV 149

[Close]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.9e-11
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 137 EDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFKLP 190
           +D C ICLE +  Q P  +T CKH +HL C++EW++RS  CPIC +  + + P
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDP 95

[Close]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-10
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 137 EDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFKLP 190
           +D C ICLE +    P  +T CKH +HL C+LEW +RS  CP+C + +  K P
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82

[Close]

BLAST of Sed0007744 vs. ExPASy TrEMBL
Match: A0A6J1D1Y3 (probable E3 ubiquitin-protein ligase RHB1A OS=Momordica charantia OX=3673 GN=LOC111016271 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 148/190 (77.89%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG--SMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK HVNGTP YYYCPLAMEERE S   SG  SMLLNAGHD +LD SIPNTYR
Sbjct: 1   MGGCCCSTRKSHVNGTPVYYYCPLAMEERESSEIRSGSASMLLNAGHDSDLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD+V RC Q K    ++     C  KTS A KIVG+ D+KSQDSPLLGGPPRK
Sbjct: 61  APPTPLPYDMVFRCPQSKDFNSIKETICGCSFKTSPAAKIVGEPDNKSQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           LEHSK KGNNTPT V EEED CPICLEEYDS+HPE ITKCKHHFHLACLLEWTERSDACP
Sbjct: 121 LEHSKLKGNNTPTLVAEEEDACPICLEEYDSEHPESITKCKHHFHLACLLEWTERSDACP 180

Query: 181 ICDKEMIFKL 189
           ICD+EMIF+L
Sbjct: 181 ICDEEMIFEL 190

[Close]

BLAST of Sed0007744 vs. ExPASy TrEMBL
Match: A0A6J1IYD3 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111479610 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK H +GTPAYYYCPL+MEERE S     S SMLL AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRKSHSDGTPAYYYCPLSMEERESSEIHGGSASMLLGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C QPK     +     C  KTSSA+KIVG+LD K QDSPLLGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQPKDLNSFKETKCGCSFKTSSALKIVGELDCKFQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTPTPV EEEDVCPICLEEY S+HPEIITKCKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPTPVTEEEDVCPICLEEYGSEHPEIITKCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 190

[Close]

BLAST of Sed0007744 vs. ExPASy TrEMBL
Match: A0A6J1E9L1 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC111431971 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79
Identity = 146/191 (76.44%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPS--GNLSGSMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+RK   +GTPAYYYCPL+MEERE S     SGSML+ AGHDLNLD SIPNTYR
Sbjct: 1   MGGCCCSTRK--SDGTPAYYYCPLSMEERESSEIHGGSGSMLIGAGHDLNLDLSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           APPTPLPYD  L+C QPK     +     C  KTSSA+KIVG+LD K QDSPLLGGPPRK
Sbjct: 61  APPTPLPYDAALKCPQPKDLNSFKETKCGCSFKTSSALKIVGELDCKFQDSPLLGGPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDACP 180
           L+HSKSKG NTP+PV EEEDVCPICLEEY S+HPEIITKCKHHFHLACLLEWTERS+ACP
Sbjct: 121 LDHSKSKG-NTPSPVTEEEDVCPICLEEYGSEHPEIITKCKHHFHLACLLEWTERSNACP 180

Query: 181 ICDKEMIFKLP 190
           ICDKE IF+LP
Sbjct: 181 ICDKETIFELP 188

[Close]

BLAST of Sed0007744 vs. ExPASy TrEMBL
Match: A0A1S3AVH0 (E3 ubiquitin-protein ligase At3g02290 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483261 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.3e-75
Identity = 143/191 (74.87%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG--SMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+R  H+NGTP YYYCP+AMEER  S   SG  SMLLNAGHDLNLDFSIPNTYR
Sbjct: 1   MGGCCCSTRNSHMNGTPTYYYCPIAMEERMTSEINSGSSSMLLNAGHDLNLDFSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           +PPTPLPYDVVL+  Q K     +     C +KT+SAVK VG+LD KSQDS    GPPRK
Sbjct: 61  SPPTPLPYDVVLKYPQQKDPNSAKERICGCSLKTTSAVKSVGELDRKSQDS----GPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEE-EDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           LEHSKSKG +T TPV EE +DVCPICLEEYDS HPEIITKCKHHFHLACLLEWTERSD C
Sbjct: 121 LEHSKSKGTSTTTPVTEEDQDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDVC 180

Query: 181 PICDKEMIFKL 189
           PICDKEMIF+L
Sbjct: 181 PICDKEMIFEL 187

[Close]

BLAST of Sed0007744 vs. ExPASy TrEMBL
Match: A0A1S4DSJ0 (E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483261 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.5e-73
Identity = 143/198 (72.22%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG--SMLLNAGHDLNLDFSIPNTYR 60
           MGGCCCS+R  H+NGTP YYYCP+AMEER  S   SG  SMLLNAGHDLNLDFSIPNTYR
Sbjct: 1   MGGCCCSTRNSHMNGTPTYYYCPIAMEERMTSEINSGSSSMLLNAGHDLNLDFSIPNTYR 60

Query: 61  APPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPRK 120
           +PPTPLPYDVVL+  Q K     +     C +KT+SAVK VG+LD KSQDS    GPPRK
Sbjct: 61  SPPTPLPYDVVLKYPQQKDPNSAKERICGCSLKTTSAVKSVGELDRKSQDS----GPPRK 120

Query: 121 LEHSKSKGNNTPTPVVEE-EDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           LEHSKSKG +T TPV EE +DVCPICLEEYDS HPEIITKCKHHFHLACLLEWTERSD C
Sbjct: 121 LEHSKSKGTSTTTPVTEEDQDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDVC 180

Query: 181 PICDK-------EMIFKL 189
           PICDK       EMIF+L
Sbjct: 181 PICDKVCSNKLQEMIFEL 194

[Close]

BLAST of Sed0007744 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG---SMLLNAGHDLNLDFSIPNTY 60
           MGGCC SSRK H+ GTP YYYCP + EE  PSG  +G   +       D+ L+ SIP+T+
Sbjct: 1   MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60

Query: 61  RAPPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPR 120
            A P PLPYD++L   Q   +  ++        +T +  + +G+ D K+  S ++   PR
Sbjct: 61  CA-PAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILS-PR 120

Query: 121 KLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           K + SK +G      V EEED CPIC E+YD ++P + TKC+H FHL+CLLEW ERSD C
Sbjct: 121 KSDFSKHQG--LKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRC 180

Query: 181 PICDKEMIF 187
           PICDKE++F
Sbjct: 181 PICDKEVVF 185

[Close]

BLAST of Sed0007744 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG---SMLLNAGHDLNLDFSIPNTY 60
           MGGCC SSRK H+ GTP YYYCP + EE  PSG  +G   +       D+ L+ SIP+T+
Sbjct: 1   MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60

Query: 61  RAPPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPR 120
            A P PLPYD++L   Q   +  ++        +T +  + +G+ D K+  S ++   PR
Sbjct: 61  CA-PAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILS-PR 120

Query: 121 KLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           K + SK +G      V EEED CPIC E+YD ++P + TKC+H FHL+CLLEW ERSD C
Sbjct: 121 KSDFSKHQG--LKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRC 180

Query: 181 PICDKEMIF 187
           PICDKE++F
Sbjct: 181 PICDKEVVF 185

[Close]

BLAST of Sed0007744 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A )

HSP 1 Score: 161.0 bits (406), Expect = 9.4e-40
Identity = 85/185 (45.95%), Postives = 114/185 (61.62%), Query Frame = 0


Query: 1   MGGCCCSSRKYHVNGTPAYYYCPLAMEEREPSGNLSG---SMLLNAGHDLNLDFSIPNTY 60
           MGGCC SSRK H+ GTP YYYCP + EE  PSG  +G   +       D+ L+ SIP+T+
Sbjct: 1   MGGCCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF 60

Query: 61  RAPPTPLPYDVVLRCSQPKTALCLEALHENCGVKTSSAVKIVGKLDSKSQDSPLLGGPPR 120
            A P PLPYD++L   Q   +  ++        +T +  + +G+ D K+  S ++   PR
Sbjct: 61  CA-PAPLPYDLLLGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILS-PR 120

Query: 121 KLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEIITKCKHHFHLACLLEWTERSDAC 180
           K + SK +G      V EEED CPIC E+YD ++P + TKC+H FHL+CLLEW ERSD C
Sbjct: 121 KSDFSKHQG--LKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRC 180

Query: 181 PICDK 183
           PICDK
Sbjct: 181 PICDK 181

[Close]

BLAST of Sed0007744 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 4.5e-34
Identity = 86/211 (40.76%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 1   MGGCCC--SSRKYHVNGTPAYYYCPLAMEEREP--SGNLSGSMLLNAG---HDLNLDFSI 60
           MGGCCC  SSR+  V+  PAYYY P A EER P  S +   S  ++ G    D NL+ S 
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSS 60

Query: 61  PNTYRAPPTPLPYDVVLRCSQP----KTALCLEALHENC-GVKTSSAVKIVG-------- 120
           P+ Y  PP P P+DV +   Q     + A C++    +     T SA + V         
Sbjct: 61  PDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVDGITLGVPT 120

Query: 121 -----KLDSKSQDSPLLGGPPRKLEHSKSKGNNTPTPVVEEEDVCPICLEEYDSQHPEII 180
                + DSK Q    L     +++   SK    P   +EEE+ CPICLEEYD ++P+++
Sbjct: 121 TCSHKETDSKIQTEIDLES-TEEIDPKLSKAVFIP---IEEEEDCPICLEEYDIENPKLV 180

Query: 181 TKCKHHFHLACLLEWTERSDACPICDKEMIF 187
            KC HHFHLAC+LEW ERS+ CP+C+KEM+F
Sbjct: 181 AKCDHHFHLACILEWMERSETCPVCNKEMVF 207

[Close]

BLAST of Sed0007744 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 58/155 (37.42%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 49  LDFSIPNTYRAPPTPLPYDVVLRC-------------SQP---KTALCLEALHENCGVKT 108
           LD S+ + Y +PPTPLPYD   R              S+P    T +  EAL +  G K 
Sbjct: 69  LDDSLSSVYHSPPTPLPYDADPRYFRFVKGSSHSGEESEPLRGDTEMSSEALGDG-GAKW 128

Query: 109 SSAVKIVGKLDSKSQDSPLLGGPPRKLEHSKS-KGNNTPTPVVEEEDVCPICLEEYDSQH 168
           S       K DS+     +          SK+  G        ++ED+CP CL++Y  ++
Sbjct: 129 S-------KSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDDYTLEN 188

Query: 169 PEIITKCKHHFHLACLLEWTERSDACPICDKEMIF 187
           P+IITKC HHFHL+C+ EW ERS+ CP+C K M F
Sbjct: 189 PKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215

The following BLAST results are available for this feature:

BLAST of Sed0007744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147277.1	3.5e-81	77.89	probable E3 ubiquitin-protein ligase RHB1A [Momordica charantia]	[more]
XP_022980128.1	6.0e-81	77.49	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima] >XP_022980129.1 pr...	[more]
XP_022924496.1	9.6e-79	76.44	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita moschata] >XP_022924497.1 ...	[more]
KAG6582620.1	1.4e-77	75.92	putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs...	[more]
XP_023527676.1	4.5e-76	74.87	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]

BLAST of Sed0007744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIJ8	1.8e-40	46.03	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LE94	2.9e-17	65.38	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q93ZF6	9.2e-16	62.75	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q4TU14	8.9e-11	45.28	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	3.4e-10	45.28	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of Sed0007744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1Y3	1.7e-81	77.89	probable E3 ubiquitin-protein ligase RHB1A OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IYD3	2.9e-81	77.49	probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1E9L1	4.7e-79	76.44	probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3AVH0	5.3e-75	74.87	E3 ubiquitin-protein ligase At3g02290 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S4DSJ0	6.5e-73	72.22	E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Sed0007744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00335.1	1.3e-41	46.03	RING-H2 finger B1A	[more]
AT4G00335.2	1.3e-41	46.03	RING-H2 finger B1A	[more]
AT4G00335.3	9.4e-40	45.95	RING-H2 finger B1A	[more]
AT5G41350.1	4.5e-34	40.76	RING/U-box superfamily protein	[more]
AT5G38895.1	2.8e-20	37.42	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 140..180 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 139..180 e-value: 7.9E-12 score: 45.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 140..181 score: 12.504031
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 117..186 e-value: 3.4E-15 score: 57.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..133
None	No IPR available	PANTHER	PTHR46463:SF42	E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED	coord: 1..187
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..187
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 134..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007744.1	Sed0007744.1	mRNA
Sed0007744.2	Sed0007744.2	mRNA
Sed0007744.3	Sed0007744.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004842	ubiquitin-protein transferase activity