
Sed0007732 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAACTCAAAATGGCGATAAAAAAGCCGACCCGAATGTCGCAGATGCTGAAGCGATGCTCGAGCTTGGGTCGGAGCTTCGACGAGCAGGGGCTCCCTTTGGACGTGCCGAAAGGCCATTTCGTCGTGTACGTTGGCGAGAATCGAAGCAGGTACATAGTCCCCATCGCGTTTCTGAATCATCCTCAGTTCCAAATCTTGCTCCAACAAGCTGCTGATGAATTTGGGTTTGATCATGATATGGGACTCACCATTCCTTGTGATGAACACTTTTTTCAGGCCTTGACTTCCTCTCTTAGATGAACCTCTTGTTCTATACATTAGTGTTTCTTTTTTTGTTTATGGCTCAATGATGAAGCTGCTGAACTGCTTCTCTGCCGTATGATAACTTTTGTTTTCTTTGAATACTTGATGG CCCAACTCAAAATGGCGATAAAAAAGCCGACCCGAATGTCGCAGATGCTGAAGCGATGCTCGAGCTTGGGTCGGAGCTTCGACGAGCAGGGGCTCCCTTTGGACGTGCCGAAAGGCCATTTCGTCGTGTACGTTGGCGAGAATCGAAGCAGGTACATAGTCCCCATCGCGTTTCTGAATCATCCTCAGTTCCAAATCTTGCTCCAACAAGCTGCTGATGAATTTGGGTTTGATCATGATATGGGACTCACCATTCCTTGTGATGAACACTTTTTTCAGGCCTTGACTTCCTCTCTTAGATGAACCTCTTGTTCTATACATTAGTGTTTCTTTTTTTGTTTATGGCTCAATGATGAAGCTGCTGAACTGCTTCTCTGCCGTATGATAACTTTTGTTTTCTTTGAATACTTGATGG ATGGCGATAAAAAAGCCGACCCGAATGTCGCAGATGCTGAAGCGATGCTCGAGCTTGGGTCGGAGCTTCGACGAGCAGGGGCTCCCTTTGGACGTGCCGAAAGGCCATTTCGTCGTGTACGTTGGCGAGAATCGAAGCAGGTACATAGTCCCCATCGCGTTTCTGAATCATCCTCAGTTCCAAATCTTGCTCCAACAAGCTGCTGATGAATTTGGGTTTGATCATGATATGGGACTCACCATTCCTTGTGATGAACACTTTTTTCAGGCCTTGACTTCCTCTCTTAGATGA MAIKKPTRMSQMLKRCSSLGRSFDEQGLPLDVPKGHFVVYVGENRSRYIVPIAFLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQALTSSLR Homology
BLAST of Sed0007732 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Sed0007732 vs. NCBI nr
Match: KAG6608586.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39 Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Sed0007732 vs. NCBI nr
Match: XP_023535895.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0007732 vs. NCBI nr
Match: XP_022937029.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >KAG6591277.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0007732 vs. NCBI nr
Match: XP_017240453.1 (PREDICTED: auxin-induced protein 15A-like [Daucus carota subsp. sativus] >KZN01177.1 hypothetical protein DCAR_009931 [Daucus carota subsp. sativus]) HSP 1 Score: 155.2 bits (391), Expect = 2.8e-34 Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33 Identity = 72/107 (67.29%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-26 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.5e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-17 Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 5.5e-17 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.2e-40 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.2e-40 Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy TrEMBL
Match: A0A6J1IE85 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.2e-36 Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy TrEMBL
Match: A0A6J1F9Z6 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111443449 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.2e-36 Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0007732 vs. ExPASy TrEMBL
Match: A0A161XX42 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_009931 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of Sed0007732 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 142.9 bits (359), Expect = 1.3e-34 Identity = 72/107 (67.29%), Postives = 81/107 (75.70%), Query Frame = 0
BLAST of Sed0007732 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 137.9 bits (346), Expect = 4.3e-33 Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of Sed0007732 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-32 Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of Sed0007732 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-32 Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Sed0007732 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 132.9 bits (333), Expect = 1.4e-31 Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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