Sed0007729 (gene) Chayote v1

Overview


Name	Sed0007729
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RRM domain-containing protein
Location	LG03: 3638435 .. 3641193 (-)
RNA-Seq Expression	Sed0007729
Synteny	Sed0007729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAAACCCTAATCCCCATTCATCGTTCTCATTTGGAAGCTCTGAGATATATAGTTCATCTTTCCGCTTCCAATTTGGTACCTCTGCTCCGAAAATTTCGTGGTAATTCAGGGAATTCTAGGGCTAGATTTCGCGGTTGCTTGTTCGTTCATTCGTTGTAGTCCAATGGGGTTTAAGGCGAAGAAAGCTATGAAGAAGAAACTTAACAAGGCTTCTTCTCGCTTATCCAACAAGAAGGAATCTGCCGATTTCTTGGTGCGTATGCTCTTCGCATCCTTCATCAACCCTTTCGACTCCGATTATGATTGTTTCTTTTCGTTATTTCATTTCCTTACTTCCTAATTACTCTGTGTTTTTAAGCCATTGGAGGGCGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGTACTGCTACGGTTCTCTACATTGGTAGAATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTGGCCGCTCACATTTTGTTTTACATTTTATGTAATTTGAAGTATAAGTTCTCGTTTTCTTATCGGATGCTTCTTATAACCCCTACGGGTTTTTACAGGGTTTTTTGGACAGTTCGGAAAAGTCAAAAGATTACGAATTGCACGGAATAGAAAGGTAATTGATTCAATCTATGGTGGTCACTCGTAAGTTAACTTCAACCAAATATAATAGGTTTAGACTATTGTTAGGTGATCATTTTGGCTAAATATACTATGGTCATATAGTTACCAATTTTCACAAATTGTGTTAGCAGGTACAAACACTTCTTTTTATTTACTAACCATCATGGAGTGAGCTAGTGGTCGAAGAGAGTCTAAGTTGATGAGTTCAATCTATGATGGCCACGTATCTAAGATTTAATTTTCTACGAGTTTTCTTAATATCTAAATATTGTATGGTCATACGGTATGTTCCGTGACATTAGGCGAGGTGCACTCGAGTTGGCCAGGACATTCACGGATATCAAAAAAAATATAAATAAAATAAACTGTTTTTTGCTGGTAATCATCATATATTTATTCACTTGATTTGACATTCTTTTATAGTATCTTCATCTATGGTTTAGTTTGTGATATATGTTTATTTTTAATGCAGACTGGGAAGTCGAGACATTTTGGCTACATTGAATTTGAATCACCGGAGGTGCTATATCTGTTTTAGGACATTTGGGCATGCAATTTTCTTAATGTATTTGATTTATTTTAACAACTTTCAGTTTATCCTAAATTTGGGTTTTGTTACCAAAGGTGGCAAAAATTGTAGCCGATTCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTCCATCTAATTCCTTCCGAGCATGCTCATCCAAAACTGTAAGTAAGCAATTTCATTTCTTCCACCATGTGATGTTATTGAACCTTTCGACTAATATCGATGTTTTTTGCTTGAATGTTGTCATATATACAGGTGGAAAGGTTTTAACTATCGCTATAAGCCCATAAATTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGTATCAAGTATAAAAAAAAAGTATCAAGTATCAAGTTTGGTAAATTATCTTTTAGATCACGAGCAAACATTTTACGTCTTGTTTTATGATGTTTTTCAGGAAAGAACATTGGATGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAAGCTAGACAGAAGAGAATAAGAGCTGCTGGGATTGAGTATGAGTGCCCAGAGATTGTAAGATTTTTCTTTCTATCCGAAGATTGTTAGGTTCGAGCTGTTTCTTAGGAAAGAAGCGTTTATTAGCCAAACTCTAATTTCTTATTATCCTTGACTTGAAGTTTTAATATTGGTATGGAGCACGATTTTATGATCTAACAACTCGCGATGCCAGAAAAAATCTTGGGGTTTCTGCTGTGTTTGTCTAAAAAGTGTCTAGTTTTTCTAGAGCGCACTTCTAAACCTATTTTTAGCTTCAAGTGAAGCGCACATGCTTGAGATCCGATTGGTCAAACCAAAACTTTTTCTGCCCTTTGTGGTTGAAGATTTGGGCATTGAAGGTGTGCTCTCAAGGTCTCAGGTTCGACTCACCTGTGACATTAATTTATAGACATCTCCTGTGTCTCCATTCCTTCGATGTCTCCTGGTGATTGGCTTAAGGACGGGCATGGTTACTCTGGGTATAATAGAGCAAAGCTCCGATTTCCCAGTTTCCAAAGAAAAGGGTCCTCCGTTGAGAGTTTGCTCTGTAATTTTGGTGTATTGGCCGGATTTTGGTTTTGTTTCCATTGTAATTATCCTTTAAATGACCATTGTTTTCGGCTATCAATCTCCTCCTTTTCTCGTGTTTTATAGGTTCTTATCTAACACTTTCAATGAACAATGAAATTGTTTTATTTTCTATCATAAAAAAACTTTTCTTGTTTCAAGGTGCAGTGTCCTTATGGTTGTTCTGCATAATTTGCAGGTGGGCAGTGTCCAACCAACTCCCAAAAAGATCAAGTTCGACGAAGATTAGAACGAGTGTTCAGTTCGTAGAAGCTATTATATTATCGCACCAGAGGAAGGCAGCAAGGAGGAAGAAAGGAGAGGAGGTTGCATGAAGAATGAATAGCCATTGCATCTTTCTAGTTTCTTATGGGTTGGTAACCTTCTGAATCTTCAAATTCGAATCTTTAAAGTTGTGTCAAACATATTTTACTCTTTAACATGTATTTCCTTTTACAAAAAATGGAAAAAAAGATTGTTTTTTTTTAGAGAA

mRNA sequence

CCTAAACCCTAATCCCCATTCATCGTTCTCATTTGGAAGCTCTGAGATATATAGTTCATCTTTCCGCTTCCAATTTGGTACCTCTGCTCCGAAAATTTCGTGGTAATTCAGGGAATTCTAGGGCTAGATTTCGCGGTTGCTTGTTCGTTCATTCGTTGTAGTCCAATGGGGTTTAAGGCGAAGAAAGCTATGAAGAAGAAACTTAACAAGGCTTCTTCTCGCTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGCGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGTACTGCTACGGTTCTCTACATTGGTAGAATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGTTCGGAAAAGTCAAAAGATTACGAATTGCACGGAATAGAAAGACTGGGAAGTCGAGACATTTTGGCTACATTGAATTTGAATCACCGGAGGTGGCAAAAATTGTAGCCGATTCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTCCATCTAATTCCTTCCGAGCATGCTCATCCAAAACTGTGGAAAGGTTTTAACTATCGCTATAAGCCCATAAATTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGAAAGAACATTGGATGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAAGCTAGACAGAAGAGAATAAGAGCTGCTGGGATTGAGTATGAGTGCCCAGAGATTGTGGGCAGTGTCCAACCAACTCCCAAAAAGATCAAGTTCGACGAAGATTAGAACGAGTGTTCAGTTCGTAGAAGCTATTATATTATCGCACCAGAGGAAGGCAGCAAGGAGGAAGAAAGGAGAGGAGGTTGCATGAAGAATGAATAGCCATTGCATCTTTCTAGTTTCTTATGGGTTGGTAACCTTCTGAATCTTCAAATTCGAATCTTTAAAGTTGTGTCAAACATATTTTACTCTTTAACATGTATTTCCTTTTACAAAAAATGGAAAAAAAGATTGTTTTTTTTTAGAGAA

Coding sequence (CDS)

ATGGGGTTTAAGGCGAAGAAAGCTATGAAGAAGAAACTTAACAAGGCTTCTTCTCGCTTATCCAACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGCGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGTACTGCTACGGTTCTCTACATTGGTAGAATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGTTCGGAAAAGTCAAAAGATTACGAATTGCACGGAATAGAAAGACTGGGAAGTCGAGACATTTTGGCTACATTGAATTTGAATCACCGGAGGTGGCAAAAATTGTAGCCGATTCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTCCATCTAATTCCTTCCGAGCATGCTCATCCAAAACTGTGGAAAGGTTTTAACTATCGCTATAAGCCCATAAATTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGAAAGAACATTGGATGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAAGCTAGACAGAAGAGAATAAGAGCTGCTGGGATTGAGTATGAGTGCCCAGAGATTGTGGGCAGTGTCCAACCAACTCCCAAAAAGATCAAGTTCGACGAAGATTAG

Protein sequence

MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSVQPTPKKIKFDED

Homology

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BLAST of Sed0007729 vs. NCBI nr
Match: XP_022993750.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 194/212 (91.51%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKL+KA+S LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI  EH HPKLWKGFNYR+KP++WSELERKQHNKERTLDEH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGI+YECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

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BLAST of Sed0007729 vs. NCBI nr
Match: XP_022922397.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 7.9e-106
Identity = 196/212 (92.45%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKLNKA+S LSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI  EH HPKLWKGFNYR+ P+NWSELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGI+YECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

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BLAST of Sed0007729 vs. NCBI nr
Match: XP_022134394.1 (uncharacterized RNA-binding protein C1827.05c [Momordica charantia])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 197/211 (93.36%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKLNKA+S LS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLIP EH HPKLWKGFNYRYKP+N  ELERKQHNKERTL EHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDE 212
           QKRIRAAGIEYECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211

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BLAST of Sed0007729 vs. NCBI nr
Match: XP_023525015.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-105
Identity = 195/212 (91.98%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKLNKA+S LSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI  EH HPKLWKGFNYR+ P+NWSELERK+ NKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKQNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGI+YECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

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BLAST of Sed0007729 vs. NCBI nr
Match: KAG7016308.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.4 bits (999), Expect = 2.0e-104
Identity = 191/212 (90.09%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKL+K +S LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI  EH HPKLWKGF+YR+KP++WSELERKQHNKERTLDEH+KLV RILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGI+YECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

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BLAST of Sed0007729 vs. ExPASy Swiss-Prot
Match: O74978 (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1827.05c PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 65/155 (41.94%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 38  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYI 97
           +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ +I
Sbjct: 92  KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151

Query: 98  EFESPEVAKIVADSMHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQH 157
           EFES +VA +VA++MHNYLLY  +L+  +IP +  H  ++KG +  +K I  + + R QH
Sbjct: 152 EFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQH 211

Query: 158 NKERTLDEHRKLVERILKRDQARQKRIRAAGIEYE 193
            K  + ++  KL+ R  ++ + ++++++  GI  E
Sbjct: 212 EKPLSKEKADKLITRHNRKLKLKKRKLKELGITLE 246

[Close]

BLAST of Sed0007729 vs. ExPASy Swiss-Prot
Match: Q8JIY8 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=nifk PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28
Identity = 75/197 (38.07%), Postives = 117/197 (59.39%), Query Frame = 0


Query: 11  KKLNKASSRL--SNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIGRIPHGFF 70
           K  +K + RL   N KE A+F        +K+   K    T       VLY+G +P G F
Sbjct: 5   KSSDKPAKRLLALNPKEDAEF-------QKKVQQVKKRPQTGQTLSPGVLYVGHLPRGLF 64

Query: 71  EKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILK 130
           E +++ +F QFGKV RLR++R++KTG S+ +G++EFE  EVAKIVA++M+NYL+ E I+K
Sbjct: 65  EPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIK 124

Query: 131 VHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQARQKR 190
            H+IP E  H KL+ G    +K   +  + R  +NK  T D+ +K+  ++L ++   +KR
Sbjct: 125 CHVIPPEKVHEKLFVGSIAGFKKPKYPAVTR--YNKTHTEDDVKKVGTKLLSKESKLRKR 184

Query: 191 IRAAGIEYECPEIVGSV 201
           + A GI+Y+ P     +
Sbjct: 185 LAAKGIDYDFPGFAAQI 192

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BLAST of Sed0007729 vs. ExPASy Swiss-Prot
Match: Q6GL69 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis OX=8364 GN=nifk PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.6e-27
Identity = 59/143 (41.26%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 52  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADS 111
           V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + Y+EFE  EVAKIVAD+
Sbjct: 42  VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADT 101

Query: 112 MHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVE 171
           M+NYL  E +LK   +P E  HP+L+ G   +++      + R  +NK R+  E +K+ +
Sbjct: 102 MNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKMTQ 161

Query: 172 RILKRDQARQKRIRAAGIEYECP 195
           R+L ++   +KR+   GI+Y+ P
Sbjct: 162 RMLSKENKVRKRLAEKGIDYDFP 182

[Close]

BLAST of Sed0007729 vs. ExPASy Swiss-Prot
Match: Q3SZM1 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=NIFK PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 58/160 (36.25%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 38  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYI 97
           R    Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G++
Sbjct: 32  RATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFV 91

Query: 98  EFESPEVAKIVADSMHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQH 157
           EFES +VAKI A++M+NYL  E +LK H IP E  H +L++ ++  +K  ++  +  K++
Sbjct: 92  EFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVHEELFREWHMPFKRPSYPAV--KRY 151

Query: 158 NKERTLDEHRKLVERILKRDQARQKRIRAAGIEYECPEIV 198
           N+ R+L +  ++ ER  K+++  +KR+   GI+Y  P +V
Sbjct: 152 NQNRSLVQKLRMEERFKKKEKLLRKRLAKKGIDYNFPSLV 189

[Close]

BLAST of Sed0007729 vs. ExPASy Swiss-Prot
Match: Q7SYS2 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=8355 GN=nifk PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 4.9e-26
Identity = 58/146 (39.73%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 49  TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIV 108
           T  V+YIG IP    E +++ +F QFG V RLR++R++KTG S+ + Y+E+E  EVAKIV
Sbjct: 39  TPGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIV 98

Query: 109 ADSMHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRK 168
           AD+M+NYL  E +LK   +  E  HP+L+ G N R++      + R  +N +R  +E +K
Sbjct: 99  ADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKK 158

Query: 169 LVERILKRDQARQKRIRAAGIEYECP 195
           + +R++ ++   +KR+   GI+Y+ P
Sbjct: 159 MTQRMISKEYKLRKRLAEKGIDYDFP 182

[Close]

BLAST of Sed0007729 vs. ExPASy TrEMBL
Match: A0A6J1JZE0 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 GN=LOC111489660 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 194/212 (91.51%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKL+KA+S LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI  EH HPKLWKGFNYR+KP++WSELERKQHNKERTLDEH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGI+YECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Sed0007729 vs. ExPASy TrEMBL
Match: A0A6J1E350 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111430401 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.8e-106
Identity = 196/212 (92.45%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKLNKA+S LSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI  EH HPKLWKGFNYR+ P+NWSELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGI+YECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Sed0007729 vs. ExPASy TrEMBL
Match: A0A6J1BYN0 (uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=LOC111006666 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.5e-106
Identity = 197/211 (93.36%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKLNKA+S LS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLIP EH HPKLWKGFNYRYKP+N  ELERKQHNKERTL EHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDE 212
           QKRIRAAGIEYECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of Sed0007729 vs. ExPASy TrEMBL
Match: A0A1S3C4U7 (uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC103496493 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 192/212 (90.57%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKL KA+   S+KKESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI  EH HPKLWKGFNYR+ P+NWSELERKQHNKERTL EH+KLV+RILKRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGI+YECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Sed0007729 vs. ExPASy TrEMBL
Match: A0A6J1FJK1 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111444637 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 189/212 (89.15%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MG KAKKAMKKKL+K +  LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTYSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI  EH HPKLWKGF+Y +KP++WSELERKQHNKERTLDEH+KLV RILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYHHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGI+YECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Sed0007729 vs. TAIR 10
Match: AT5G04600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-73
Identity = 134/221 (60.63%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MGFKAKKAMKKKLNKASSRLS--------NKKESADFLPLEGGPGRKLP-AQKPLESTAT 60
           MG KAKKA+KK + K ++  S        N K SADFLPLEGGP RK P    PL++ AT
Sbjct: 1   MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60

Query: 61  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADS 120
           VLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS+HFG+I+FE PEVA+I A +
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGA 120

Query: 121 MHNYLLYEHILKVHLIPSEHAHPKLWKGFNYRYKPINWSELERKQHNKERTLDEHRKLVE 180
           M++YLL EH+LKVH+I  E+  P LW+GF   +KP++  ++ER+Q NKERTL+EHRK+++
Sbjct: 121 MNDYLLMEHMLKVHVIEPENVKPNLWRGFKCNFKPVDSVQIERRQLNKERTLEEHRKMLQ 180

Query: 181 RILKRDQARQKRIRAAGIEYECPEIVGSVQPTPKKIKFDED 213
           +I+K+DQ R+KRI AAGIEYECPE+VG+ QP PK+IKF E+
Sbjct: 181 KIVKKDQKRRKRIEAAGIEYECPELVGNTQPVPKRIKFSEE 221

[Close]

BLAST of Sed0007729 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 6.9e-07
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 46  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVA 105
           ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 106 KIVADSMHN 115
           +IV    HN
Sbjct: 61  EIVITEKHN 69

[Close]

BLAST of Sed0007729 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 6.9e-07
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 46  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVA 105
           ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 106 KIVADSMHN 115
           +IV    HN
Sbjct: 61  EIVITEKHN 69

[Close]

BLAST of Sed0007729 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 29/97 (29.90%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 41  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIE 100
           P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I 
Sbjct: 3   PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62

Query: 101 FESPEVAKIVADSMHNYLLYEHILKVHLIPSEHAHPK 136
           F  P VA+ V       ++ +HI+    + ++ A P+
Sbjct: 63  FADPSVAERV-------IMDKHIIDGRTVEAKKAVPR 92

[Close]

BLAST of Sed0007729 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 7.6e-06
Identity = 28/95 (29.47%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 43  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE 102
           ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F 
Sbjct: 2   EQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFA 61

Query: 103 SPEVAKIVADSMHNYLLYEHILKVHLIPSEHAHPK 136
            P VA+ V       ++ +HI+    + ++ A P+
Sbjct: 62  DPSVAERV-------IMDKHIIDGRTVEAKKAVPR 89

The following BLAST results are available for this feature:

BLAST of Sed0007729 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993750.1	3.6e-106	91.51	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]	[more]
XP_022922397.1	7.9e-106	92.45	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]	[more]
XP_022134394.1	1.8e-105	93.36	uncharacterized RNA-binding protein C1827.05c [Momordica charantia]	[more]
XP_023525015.1	6.7e-105	91.98	MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pep...	[more]
KAG7016308.1	2.0e-104	90.09	MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyro...	[more]

BLAST of Sed0007729 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74978	3.0e-31	41.94	Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (stra...	[more]
Q8JIY8	1.8e-28	38.07	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=...	[more]
Q6GL69	7.6e-27	41.26	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis...	[more]
Q3SZM1	2.2e-26	36.25	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=N...	[more]
Q7SYS2	4.9e-26	39.73	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=...	[more]

BLAST of Sed0007729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZE0	1.7e-106	91.51	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E350	3.8e-106	92.45	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1BYN0	8.5e-106	93.36	uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3C4U7	2.1e-104	90.57	uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1FJK1	1.8e-103	89.15	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Sed0007729 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04600.1	1.9e-73	60.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	6.9e-07	36.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	6.9e-07	36.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.5e-06	29.90	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	7.6e-06	29.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR46754:SF9	SUBFAMILY NOT NAMED	coord: 1..212
None	No IPR available	PANTHER	PTHR46754	MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN	coord: 1..212
None	No IPR available	CDD	cd12307	RRM_NIFK_like	coord: 52..125 e-value: 3.53056E-42 score: 135.395
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 52..125 e-value: 1.8E-19 score: 80.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 53..120 e-value: 2.7E-13 score: 49.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 51..129 score: 14.760482
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..134 e-value: 2.2E-21 score: 78.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 31..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007729.1	Sed0007729.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding