Sed0007722 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAATCCGCCATTAATTCTTCTCCTTATTCGCGTATTTCTTTTATCAGTTGTGCGCAATTGTGAAACCTCAGAATAAGAAACCTCTGCATTTACTCCCTCAATTTGTTTTGGACAAATTTTACTTTCAATGATGATTCAATTCTTACTTTTCTCAACCATTTCAGTATTTATTGTGAAGAACCAGCTTGAAACTAGCTGATTCTTGTCCTTCCCCTTCAGACTCAAATACCCTTTAATTTCCCTCTTTCAATTTCAATTCATTGATGCTCTAAAGGAAGGATCTGTGTTCTTTCATTCACTCTGGTCACTAGAGGTGGTTTCTCTGCCTTTGGTTTTGGAAGTTGTGAGATGGGAAGGAAGCCGTGTTGTGATAAGAAGGGGTTAAAGAAAGGGCCATGGACACCAGAAGAAGATGAGCTCCTTATTGATTATATCAAGAAAAATAATGGTCATGGAAGCTGGAGATCCCTCCCCAAGCTTGCAGGTTTAGTTATCCAATAATTTTGCTAGTTCCCACTTGTCTGCTGTCTCCTTTTTTTTAATACAATTGGAGGGACTTGAAAGTAGAACCACAAATCTTGTGGATTTTAAATACATTCTTATAGTCGAGTTATGCTCACTTTTGTCTATTTTTATCATAACTCTTGGAACATATTTTATCCATTACTTTGAAATTTATTGTAACGGGAGTGTTTTTAAAAGCTCAAGCCGTTAGACGCTTTATATATAAGAACATTCATAAAGAAGAGTTGACATAGTTAGAACTGGAAAAATTAAGAAAAAGTACTATAAAGATGAGTGAATGTTATTTCTGTAGTTAACAAAGAACAAAAAAAGAACCTAAATGCAAGGATTTTTGCATTTAAGGTTAAAAAAACTAATTTTTTACAATTAACACACTTCTTGACCCGAGGCACGCATGGCGCAAGCAAGATGCTAGATCTCAGCACCTTGAGCCTAGGTGCAAGCCCTATATTTTTTTTGAGACAAGGGTCACCACGCCCGTCCCTAGGCCAGGCACCGGGAAACATCGAAGGAGTAATGTCACAACTGAGGTGAAGCCCTATAAAACATTGAACTAGGGTGTCAAAGAAAAAAGAAGAAGAAGCTCAAGTAGTTGGGTCTTTTACCCTGCTCTTTTCCCTTTCAATCTTTCAATATCTCTATGTCCCGTGTGCTTTGTTACCAAACAATGTGCAGAAAAAGATTTAGCATCATTTTGGACTTTAGGATGCACCCTAATTTTTCTTGCAGGAATGATTCTTGTGTTCTTCATTTATTTATTTTGTTTCTCACTTTGGTTTGTGTACGTTATTGTGTTTGTTTTAGGTCTTCTAAGATGTGGGAAGAGCTGCCGTTTGAGGTGGACGAACTATCTAAGGCCTGATATCAAACGCGGCCCCTTTACCACTGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTTGGAAACAGGTTATGCTTCATAGTGTTCTTCTTGAACAGCATCATAGATTTGGCTGCTAAAGTTTATGGAGCCCTTTTTTTTTTTCCTGTTTTCGTCTGATTTGCTATATGTTTAGGATGTTCTTCACACATGAGCTACAATTAGATATTTGAATAGAGAAAGACGTTTAGCCCTTTGTTTGGCCACATTAACTCAAAGGCTAATTCTTTATTTAGCCCAACCTATCAAAAGCTGTTGAAGAGATCAATAGTTATTTAACATGATTCTGATAGATTTGGGGTTTTAGAAGAATTATGAATAATATGATTGATATTTGGGCAATTAGTTTGGGAATTAATTGGATTATTTGGTTTTAAATGGGAGGGATAGGTAATGTGATTTGGTATCCAAATATTGGGCGAAGAATTAGTAGGCTCAAGCGAGTATTCTCTAGAGATGGGAGGTTCCAAGTTCTTATCAAAATTTGCTTATCTTGTAGTTTCTTTACCATTTGATATCAATATAGATCTTGTATCCTATTAGATTCAACATGATATCAGAGCAAGAGGTCCTATATTCAAATTCCCATCCAAGTCGTTTCCTCCCCTTAAGTATTGATTTTCACATGTTGGACATTTTCAATTTTTCTTGTCAACAAATGAAAGTAGTATTGGTTGATGTAATTAAATTTACCCAAACTTATCAATTTAAGCTAGAGGTTTCAAGATTTTCTGAAAAATCTGATAAACAATTCATCATTCTCGAGCTCGTCTACTCCAGCTTTTTTTATAAGAACCAATTTTATTGATGTATGAAATTACTAAAGAAAGAGGATGAAACCTCGAGGAGAGAAATTACAAAAGACCACAAAGCTGTAATGATGAAACAGATGAGGAAGTTTACACCTCATAGGTCAAAACAACAAGTTCTCAATAATAGCCAAAACCAAGGAAGGACAGAAAACAAAATCAAGAACTTATGAATATTGTTTGATAGATTTTTACTGATTGGGACTTTTTGCAGGTGGGCTGCTATTGCTTGTCAACTTCCAGGAAGGACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAGACACACGAACCCTTCAACTCTCGCTGCTCTTCCTCTACACAACCCGCATCCCCGACCACCCGCCACATGACACAGTGGGAGAGTGCTCGGCTCGAAGCTGAAGCTCGGCTTTCGAGGGAGTCGTCACTCTTCACCCCACTTCACACAGAAAGAACAGCTGATTCTGACATTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAAGGAAGATAACAAGGCCACATGCCAAAGCCAGAGTCCCATATCCTCATCGATCAAATGCGAGTCAATCTTTGATAACGGATTCGATTACACCGGTTCCTCAGCCAGGGAAAGAAATGAAAATGAAGAAACGGAGTTTGAAAACTTCAAACCTATGGCTGATGACATTGTGATGTCCAAGTCTGATTCATCGAGTCCGAACGAGTTCGAGGAGTCATCGGACAGTGCATTAGAACTTCTTCTGGACTTCCCCATGAACAATGACATGAGTTTCTTGGAGGAAAACAACATAAACTAGCAGTCACAGCAGCAGCATCTGCAGTAGAAGGTTAGGTCCCAAGTTTTGTGGGATGTTAGCAAAACTATTGGTAAGTTATGCTTAGTTGAAAAGGGGATTTGTACTAAGTGGCAAATTCTGTATGTAGAGATATAGCATATGTGGTTTTGGGTCCAGAGCCCTCATGAGACACTGATTAATTTTACTGCTTTCATATTCTCATCA TAAGAATCCGCCATTAATTCTTCTCCTTATTCGCGTATTTCTTTTATCAGTTGTGCGCAATTGTGAAACCTCAGAATAAGAAACCTCTGCATTTACTCCCTCAATTTGTTTTGGACAAATTTTACTTTCAATGATGATTCAATTCTTACTTTTCTCAACCATTTCAGTATTTATTGTGAAGAACCAGCTTGAAACTAGCTGATTCTTGTCCTTCCCCTTCAGACTCAAATACCCTTTAATTTCCCTCTTTCAATTTCAATTCATTGATGCTCTAAAGGAAGGATCTGTGTTCTTTCATTCACTCTGGTCACTAGAGGTGGTTTCTCTGCCTTTGGTTTTGGAAGTTGTGAGATGGGAAGGAAGCCGTGTTGTGATAAGAAGGGGTTAAAGAAAGGGCCATGGACACCAGAAGAAGATGAGCTCCTTATTGATTATATCAAGAAAAATAATGGTCATGGAAGCTGGAGATCCCTCCCCAAGCTTGCAGGTCTTCTAAGATGTGGGAAGAGCTGCCGTTTGAGGTGGACGAACTATCTAAGGCCTGATATCAAACGCGGCCCCTTTACCACTGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTTGGAAACAGGTGGGCTGCTATTGCTTGTCAACTTCCAGGAAGGACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAGACACACGAACCCTTCAACTCTCGCTGCTCTTCCTCTACACAACCCGCATCCCCGACCACCCGCCACATGACACAGTGGGAGAGTGCTCGGCTCGAAGCTGAAGCTCGGCTTTCGAGGGAGTCGTCACTCTTCACCCCACTTCACACAGAAAGAACAGCTGATTCTGACATTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAAGGAAGATAACAAGGCCACATGCCAAAGCCAGAGTCCCATATCCTCATCGATCAAATGCGAGTCAATCTTTGATAACGGATTCGATTACACCGGTTCCTCAGCCAGGGAAAGAAATGAAAATGAAGAAACGGAGTTTGAAAACTTCAAACCTATGGCTGATGACATTGTGATGTCCAAGTCTGATTCATCGAGTCCGAACGAGTTCGAGGAGTCATCGGACAGTGCATTAGAACTTCTTCTGGACTTCCCCATGAACAATGACATGAGTTTCTTGGAGGAAAACAACATAAACTAGCAGTCACAGCAGCAGCATCTGCAGTAGAAGGTTAGGTCCCAAGTTTTGTGGGATGTTAGCAAAACTATTGGTAAGTTATGCTTAGTTGAAAAGGGGATTTGTACTAAGTGGCAAATTCTGTATGTAGAGATATAGCATATGTGGTTTTGGGTCCAGAGCCCTCATGAGACACTGATTAATTTTACTGCTTTCATATTCTCATCA ATGGGAAGGAAGCCGTGTTGTGATAAGAAGGGGTTAAAGAAAGGGCCATGGACACCAGAAGAAGATGAGCTCCTTATTGATTATATCAAGAAAAATAATGGTCATGGAAGCTGGAGATCCCTCCCCAAGCTTGCAGGTCTTCTAAGATGTGGGAAGAGCTGCCGTTTGAGGTGGACGAACTATCTAAGGCCTGATATCAAACGCGGCCCCTTTACCACTGAGGAAGAGAAGCTTGTTATTCAGCTCCATGGAATTCTTGGAAACAGGTGGGCTGCTATTGCTTGTCAACTTCCAGGAAGGACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAGACACACGAACCCTTCAACTCTCGCTGCTCTTCCTCTACACAACCCGCATCCCCGACCACCCGCCACATGACACAGTGGGAGAGTGCTCGGCTCGAAGCTGAAGCTCGGCTTTCGAGGGAGTCGTCACTCTTCACCCCACTTCACACAGAAAGAACAGCTGATTCTGACATTTTTCTTCAAATATGGAACTCTGAAGTTGGTGAATCATTTCGTAGGTGCAAGGAAGATAACAAGGCCACATGCCAAAGCCAGAGTCCCATATCCTCATCGATCAAATGCGAGTCAATCTTTGATAACGGATTCGATTACACCGGTTCCTCAGCCAGGGAAAGAAATGAAAATGAAGAAACGGAGTTTGAAAACTTCAAACCTATGGCTGATGACATTGTGATGTCCAAGTCTGATTCATCGAGTCCGAACGAGTTCGAGGAGTCATCGGACAGTGCATTAGAACTTCTTCTGGACTTCCCCATGAACAATGACATGAGTTTCTTGGAGGAAAACAACATAAACTAG MGRKPCCDKKGLKKGPWTPEEDELLIDYIKKNNGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTTEEEKLVIQLHGILGNRWAAIACQLPGRTDNEIKNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTQPASPTTRHMTQWESARLEAEARLSRESSLFTPLHTERTADSDIFLQIWNSEVGESFRRCKEDNKATCQSQSPISSSIKCESIFDNGFDYTGSSARERNENEETEFENFKPMADDIVMSKSDSSSPNEFEESSDSALELLLDFPMNNDMSFLEENNIN Homology
BLAST of Sed0007722 vs. NCBI nr
Match: XP_022147297.1 (transcription factor MYB41 [Momordica charantia] >XP_022147298.1 transcription factor MYB41 [Momordica charantia]) HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148 Identity = 263/299 (87.96%), Postives = 275/299 (91.97%), Query Frame = 0
BLAST of Sed0007722 vs. NCBI nr
Match: XP_022924438.1 (transcription factor MYB41-like isoform X1 [Cucurbita moschata] >XP_022980366.1 transcription factor MYB41-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 530.4 bits (1365), Expect = 9.9e-147 Identity = 263/300 (87.67%), Postives = 274/300 (91.33%), Query Frame = 0
BLAST of Sed0007722 vs. NCBI nr
Match: XP_023526750.1 (transcription factor MYB41-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 529.6 bits (1363), Expect = 1.7e-146 Identity = 263/300 (87.67%), Postives = 273/300 (91.00%), Query Frame = 0
BLAST of Sed0007722 vs. NCBI nr
Match: KAG6582606.1 (Transcription factor MYB17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146 Identity = 263/300 (87.67%), Postives = 272/300 (90.67%), Query Frame = 0
BLAST of Sed0007722 vs. NCBI nr
Match: XP_038884956.1 (transcription factor MYB17 [Benincasa hispida] >XP_038884962.1 transcription factor MYB17 [Benincasa hispida]) HSP 1 Score: 520.8 bits (1340), Expect = 7.8e-144 Identity = 259/300 (86.33%), Postives = 272/300 (90.67%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy Swiss-Prot
Match: Q9M2D9 (Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.4e-95 Identity = 185/299 (61.87%), Postives = 217/299 (72.58%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 9.5e-68 Identity = 123/175 (70.29%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 7.5e-65 Identity = 120/182 (65.93%), Postives = 137/182 (75.27%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy Swiss-Prot
Match: Q9S9Z2 (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 2.0e-57 Identity = 97/129 (75.19%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy Swiss-Prot
Match: Q9M0Y5 (Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 6.4e-56 Identity = 97/130 (74.62%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy TrEMBL
Match: A0A6J1D0Y2 (transcription factor MYB41 OS=Momordica charantia OX=3673 GN=LOC111016284 PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 8.7e-149 Identity = 263/299 (87.96%), Postives = 275/299 (91.97%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy TrEMBL
Match: A0A6J1ITE6 (transcription factor MYB41-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479755 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 4.8e-147 Identity = 263/300 (87.67%), Postives = 274/300 (91.33%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy TrEMBL
Match: A0A6J1ECF6 (transcription factor MYB41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431942 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 4.8e-147 Identity = 263/300 (87.67%), Postives = 274/300 (91.33%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy TrEMBL
Match: A0A5D3D1U6 (Transcription repressor MYB6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004600 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 5.5e-143 Identity = 259/301 (86.05%), Postives = 272/301 (90.37%), Query Frame = 0
BLAST of Sed0007722 vs. ExPASy TrEMBL
Match: A0A1S4DT66 (transcription repressor MYB6 OS=Cucumis melo OX=3656 GN=LOC103484167 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 5.5e-143 Identity = 259/301 (86.05%), Postives = 272/301 (90.37%), Query Frame = 0
BLAST of Sed0007722 vs. TAIR 10
Match: AT3G61250.1 (myb domain protein 17 ) HSP 1 Score: 350.9 bits (899), Expect = 1.0e-96 Identity = 185/299 (61.87%), Postives = 217/299 (72.58%), Query Frame = 0
BLAST of Sed0007722 vs. TAIR 10
Match: AT3G01140.1 (myb domain protein 106 ) HSP 1 Score: 252.3 bits (643), Expect = 4.8e-67 Identity = 120/171 (70.18%), Postives = 137/171 (80.12%), Query Frame = 0
BLAST of Sed0007722 vs. TAIR 10
Match: AT5G15310.1 (myb domain protein 16 ) HSP 1 Score: 248.8 bits (634), Expect = 5.4e-66 Identity = 120/182 (65.93%), Postives = 137/182 (75.27%), Query Frame = 0
BLAST of Sed0007722 vs. TAIR 10
Match: AT5G15310.2 (myb domain protein 16 ) HSP 1 Score: 248.8 bits (634), Expect = 5.4e-66 Identity = 120/182 (65.93%), Postives = 137/182 (75.27%), Query Frame = 0
BLAST of Sed0007722 vs. TAIR 10
Match: AT1G34670.1 (myb domain protein 93 ) HSP 1 Score: 224.2 bits (570), Expect = 1.4e-58 Identity = 97/129 (75.19%), Postives = 111/129 (86.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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