Sed0007692 (gene) Chayote v1

Overview
NameSed0007692
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSignal recognition particle 9 kDa protein
LocationLG05: 456507 .. 460015 (+)
RNA-Seq ExpressionSed0007692
SyntenySed0007692
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGAGTGTGGAAGTTATTTGTGGACGATGTTTTCGCTGTGTGTACCTCATGTTTTTGCACGTGTCCATATTTAAATGTTTAAGTTATATAGTTGACTTTTTTCCAACTCAATATTTTTAGAAATATTTTTTTATTATGACTAAGGAAAGACCATCTTTAATGCATATGTGACACTATTTGGTACACAATTTTTTTTACTTTTTTCTTTCAAATATTGTTAAATAAAAAATTTGTGACATCAAATAATACTCATTTACGATGGTTCCCCTCCTTAGTTATAAGGAGAGAATGTTTCTCTTATTTTTCTCCATTAATAGGGGTGTTGTTTGTCAAATTGACGGAAGATTTAAAATGAAATACTCCATATACTCCATAAAAAGAAATTCTAAACAAGTTTTTTGTAACCATTCAAAATAATTACCTATTTTATTATTAAAGTTAACTTCTCATTTCTAACCACCCATTTTTAATTATTCATTTATAGTTATTCAAAATAATTTTTCATTTCTAACCACTCATTTTTAATCATTCTTTTCCAACTCCTCAAATAATTCATTTTTAACAGCTCATTGTTAATCATTTTTTCTTTTAAATATTCATTTTAAATCTACATCTAAACAAGTTATTGTTTCTAACTGCTCTACTTAAAAAAAAATGCCTCCAAATAAGTTTTTAACCATAACTCTCAAATTCTAACTGAGCAAAATAATTCTTCATCCAAACCCAAACACCTCCTATCTCTGTAAATATAAGATGTTGAAAAAGTGAGAAATTTTCTAGCATTAAAAGATGGACTAAAATTAAGAAAAAATAATAAACATATAAGGTATAGAGGGGAATTTGAGTGCACCCAAGGGTGCACCCCACCCATGAAGTCAACATATGTGGCACGTTTGGTGCCACACATCCCCTCTAAGGTATAAGTGGACTACTAATTTTCTTTATCAATTAGTTTTGAAATACCCAAATAATTTAATTATTTAATAGAAAATTTAGTTTAAAAAATAGTTATCGTAAATTTAAATTTGAAAGACTACAAATTGCCATCTAAACTTTCCTTCTCTTTGGCTTGTGCCGCAGAGCCATTACTTTTTGTTTTCTGTTGAAATTGCGAGCTTGCAGTTTTGTCATATGTTTCGTTTATTGCATCTTTCTTCTTCGTATTTTGTTTCGTTCTAACTGTGACTGCTGTTTTGTTGTTCAATTCCATGGGAAATTTAGACGCGGCACAACATCAAGTATCGACACTGTGATGGAAAATTGGTTCTTAAGGTCACTAAGGACTTGTTTGTTGGATCATTGATTAACTTCTTGTTTTCTTTTGACTACTAATTTTGATTATATTAACTTCCATGTGTCACACACACGGTAACCGGTCGGTTACGGGTTCGATCCTAAATGTTGTTGAATTGAAGAAAAAAAATGCATAGGTCTGTAGTTCATGTGGTAAAATTGTTACATGCCAATGTTTGAAGATGGGTGTTGAGTCTTTGATGCACATGTATCCAAGCAGACTTGTGATCAAGTTTTTTTTTTTTGAAACTGAAAAATCGGAGCTTCTCTCAACTATATTCGGGGTAATCACGTCCGCCCCTAGGTTAGGCATCGGGAGACATCGAAAGAATGGAGATAAGAAAAGTATTTACAAATTAATATCACAAGTAAATCTCGAACCTAGAACCTTGAGGGGAGTTCAAGCCTTCGACCACTATACCACCCCTTGAAGACTTCTATATTCTACATATATATGCTTTGAGTGTAGGCAATGATTGAATTTTTCGTGTTAGATTGGATGCCACTATTGTATGCAACCATAAACCAACTAATCCCTAATCCAAACCAAAACTTTCACTGACTATATTTCGGTTTCTTTTATTATATTGGCAGAAGAGATATTTCATAAGCATTATTTATAGCGGAGGATTAGGATGTGGGAGTGTTTGAATTGTTACGCCATGTTAACAATGGTTTTCTTTTCTAAGTTGTCTTTCTCATGTGGAAGAATGAAAACTATTTAGGCTAAATACATGGGGTGCAAGATATCAACTAAGAATACGACAAGTACTCCCCGATCTAAGCCTTGTGACAGGCGCGACTCGGGAGTGCCTCTGAGTATGTAGTGGAGTGAAACTCTAATTCCCGATTATCAAAAAAATTAAGAATATGATTTGCGAATTTCATATATTGATGTTTACTCATATGGGGAATTTAGTACATGCACCATACACCCCTCGTGATAAATCGGGACAAGATAATAATTTTGTATTGAAACGAACACTTTTATCACAAGGGCATATGTCAAATCATACTAATATCATGTTCGGAATAGTAGTTCTTGTCTTTCTAGACGTGTGGGGTCTTCTAATTGTCTCTCTTTTTTTTTCTTCCTTTTTTTCTCTCCATGTTCGGTAGTGTCTTAAGTTCAAGACTGACCAGGCACAGAGACGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCGCTCTGATGGCCCGAGACCCTGATGGTATGTTTCTTTGAGTTTATGTTATAATGAAGCTTCTGAATACTCTGTTGAATAATAAATAACCACTTCCTATCAATATGATTTTGTACTTTTTGTACTTTTTTTATATATATATCTGTGATTGTCTAAGTCAGTTTGCACGCATCTCGACTTAGTCTAACCCTATAACATTTGGATGTTAAGGAAATCTATAGAAAATTAATTCCTAAGTAAGTGACCACCATAGATTGAACTTATCATCTCATGCACTTCAAGACCCTGTATGACCAATAGGCCCCTCCATGAAGGTTGTTTTGTACTTAAATTTTAATCTTGTTCTCTAATTGCATGAAGGTCCCATATCCTTGAATTTCAGCAACTTGTAAATCAGTTCCATTTGGATATCAGCACTTGAAGGACGAGTTCGCTTTCTCTTTTGAATGTAGTTTCATGAATGAATACAGACTTCCTTGCTAACTTTTTTAAATTGGAAAAAAGGTTCTGAGTGCCTGGAGTTCTCACAATCTATTATCCAAAAAATGCGAACCTAGCATTTTTTTAATAACCGTGACTGTCTAGGCAAGCTTGCGCACGGTTCGACTAATGTCACGGGACATACCATCTGACCCTATAACATTTTGATGTCAAGAAAATTCGAAGGAAATGAATTTTTAGGTAGGCGACTACCATGGATTAAACCTATCACTTCTTAGCTGTCTGAGACCCTCTTAACCAGCCGGACACTCCATGAAGGTTAACCCTAGCATTCATGTAAAATCATTTTTTTAATCTATTTTTGCTTATTTACTTGGCAATGCTTCACTTGTAAATCTAATGTGCACTTAGTTCTACTAGTTAGAATACTCTTATATTTTGCCTTTTCTCTTTTATGCAGGGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAACGAATTCCCATTGACTATTGCAATAATAGGTTTCTCGTAGTTCTCTAA

mRNA sequence

ATGGAATTGAGTGTGGAAACGCGGCACAACATCAAGTATCGACACTGTGATGGAAAATTGGTTCTTAAGGTCACTAAGGACTTTGTCTTAAGTTCAAGACTGACCAGGCACAGAGACGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCGCTCTGATGGCCCGAGACCCTGATGGGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAACGAATTCCCATTGACTATTGCAATAATAGGTTTCTCGTAGTTCTCTAA

Coding sequence (CDS)

ATGGAATTGAGTGTGGAAACGCGGCACAACATCAAGTATCGACACTGTGATGGAAAATTGGTTCTTAAGGTCACTAAGGACTTTGTCTTAAGTTCAAGACTGACCAGGCACAGAGACGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCGCTCTGATGGCCCGAGACCCTGATGGGGATATATCGGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAACGAATTCCCATTGACTATTGCAATAATAGGTTTCTCGTAGTTCTCTAA

Protein sequence

MELSVETRHNIKYRHCDGKLVLKVTKDFVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEVTGKEQVDAQPTKKGRGRKQRIPIDYCNNRFLVVL
Homology
[Close]
BLAST of Sed0007692 vs. NCBI nr
Match: XP_022146059.1 (signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_022146061.1 signal recognition particle 9 kDa protein isoform X1 [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 7.9e-24
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQVDAQPTKKGRGRKQ
Sbjct: 85  TGKEQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. NCBI nr
Match: XP_022930934.1 (signal recognition particle 9 kDa protein-like [Cucurbita moschata] >XP_022930935.1 signal recognition particle 9 kDa protein-like [Cucurbita moschata] >XP_022995181.1 signal recognition particle 9 kDa protein [Cucurbita maxima] >XP_022995182.1 signal recognition particle 9 kDa protein [Cucurbita maxima] >XP_023533640.1 signal recognition particle 9 kDa protein [Cucurbita pepo subsp. pepo] >KAG6606397.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.6 bits (301), Expect = 7.9e-24
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFFALMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFALMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQ DAQPTKKGRGRKQ
Sbjct: 85  TGKEQADAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. NCBI nr
Match: XP_004154105.1 (signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 signal recognition particle 9 kDa protein [Cucumis sativus] >XP_008449345.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_008449346.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_031736389.1 signal recognition particle 9 kDa protein [Cucumis sativus] >KAA0057425.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa] >KGN61688.1 hypothetical protein Csa_006515 [Cucumis sativus] >TYK30124.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-23
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGK+QVDAQPTKKGRGRKQ
Sbjct: 85  TGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. NCBI nr
Match: XP_022963515.1 (signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 signal recognition particle 9 kDa protein [Cucurbita moschata] >KAG7011249.1 Signal recognition particle 9 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+N+KYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGK+QVDAQPTKKGRGRKQ
Sbjct: 85  TGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. NCBI nr
Match: XP_038887366.1 (signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 signal recognition particle 9 kDa protein [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-23
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+N+KYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGK+QVDAQPTKKGRGRKQ
Sbjct: 85  TGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy Swiss-Prot
Match: Q9SMU7 (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.1e-23
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+ +KYRHCDGKLVLKVT +   L  +  + ++AKKMEKLNNIFF LMAR PD D+SEV
Sbjct: 25  TRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQ++ QP KKGRGRKQ
Sbjct: 85  TGKEQMETQPAKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy Swiss-Prot
Match: O04438 (Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 53/79 (67.09%), Postives = 62/79 (78.48%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+ +KYRHC+GKLVLKVT D   L  +  + +DAKKMEKLNNIFFALM R PD DISEV
Sbjct: 25  TRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAKKMEKLNNIFFALMTRGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           +GKEQ + Q  KKGRGR+Q
Sbjct: 85  SGKEQAEQQQAKKGRGRRQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy Swiss-Prot
Match: Q55GL2 (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 GN=srp9 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04
Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 7  TRHNIKYRHCDGKLVLKVTKDFV-LSSRLTRHRDAKKMEKLNNIFFAL 54
          TR + K+RH +GK+VLKVT D V L  +  +  D K+++++N++FF L
Sbjct: 24 TRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKRIDQINSLFFRL 71

[Close]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match: A0A6J1K1A1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111490803 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-24
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFFALMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFALMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQ DAQPTKKGRGRKQ
Sbjct: 85  TGKEQADAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match: A0A6J1CY87 (Signal recognition particle 9 kDa protein OS=Momordica charantia OX=3673 GN=LOC111015357 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-24
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQVDAQPTKKGRGRKQ
Sbjct: 85  TGKEQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match: A0A6J1EY60 (Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111437277 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-24
Identity = 62/79 (78.48%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFFALMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFALMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQ DAQPTKKGRGRKQ
Sbjct: 85  TGKEQADAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match: A0A1S3BLU0 (Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC103491251 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.5e-24
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGK+QVDAQPTKKGRGRKQ
Sbjct: 85  TGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match: A0A5D3E2L2 (Signal recognition particle 9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001060 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.5e-24
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+NIKYRHCDGKLVLKVT +   L  +  + +DAKKMEKLNNIFF LMAR PD DISEV
Sbjct: 25  TRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGK+QVDAQPTKKGRGRKQ
Sbjct: 85  TGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Sed0007692 vs. TAIR 10
Match: AT3G49100.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 107.5 bits (267), Expect = 6.4e-24
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 7   TRHNIKYRHCDGKLVLKVTKD-FVLSSRLTRHRDAKKMEKLNNIFFALMARDPDGDISEV 66
           TR+ +KYRHCDGKLVLKVT +   L  +  + ++AKKMEKLNNIFF LMAR PD D+SEV
Sbjct: 25  TRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEV 84

Query: 67  TGKEQVDAQPTKKGRGRKQ 85
           TGKEQ++ QP KKGRGRKQ
Sbjct: 85  TGKEQMETQPAKKGRGRKQ 103

The following BLAST results are available for this feature:
BLAST of Sed0007692 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022146059.17.9e-2478.48signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_0... [more]
XP_022930934.17.9e-2478.48signal recognition particle 9 kDa protein-like [Cucurbita moschata] >XP_02293093... [more]
XP_004154105.11.8e-2377.22signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 sign... [more]
XP_022963515.12.3e-2375.95signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 s... [more]
XP_038887366.13.9e-2375.95signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 si... [more]
BLAST of Sed0007692 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SMU79.1e-2368.35Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP... [more]
O044381.3e-2167.09Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1[more]
Q55GL22.5e-0443.75Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 G... [more]
BLAST of Sed0007692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K1A13.8e-2478.48Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1CY873.8e-2478.48Signal recognition particle 9 kDa protein OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1EY603.8e-2478.48Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A1S3BLU08.5e-2477.22Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC10349125... [more]
A0A5D3E2L28.5e-2477.22Signal recognition particle 9 kDa protein OS=Cucumis melo var. makuwa OX=1194695... [more]
BLAST of Sed0007692 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49100.16.4e-2468.35Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 2..64
e-value: 1.2E-13
score: 52.7
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 6..59
NoneNo IPR availablePANTHERPTHR12834:SF13SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 6..84
IPR039914Signal recognition particle SRP9PANTHERPTHR12834SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 6..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007692.1Sed0007692.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045900 negative regulation of translational elongation
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding