Sed0007664 (gene) Chayote v1

Overview


Name	Sed0007664
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Stress-induced protein KIN2-like
Location	LG03: 1785578 .. 1786187 (+)
RNA-Seq Expression	Sed0007664
Synteny	Sed0007664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACAACTCTCAAAAGATGAGTTACCATGCTGGAGAGGCCAAGGGCCAAGCTCAGGTTTTTAAACTCTTATCTTTTTTTTTTTCATTTATAAACCATATAATAATGATGTATCTAAGCAAAATTTATTATAAAGTACTATTCATATGTATGATTGTCTTTACTCATCAGTAGGTAGGTCTCATACTACTAATTTTAATAATTATAGATAGTTGTTTTTTTTAAACAAGGAAAACCTCGCCCATTCCTAAGTCAGGCACCGGAGACATCAAAGGAGTAATGTCACAGGTGAGTCTCGAACTTGGCTCCTTGAGAGTAGCATAGCCTCAAAACTCAAGTCTTCAACGAGTGTATCACCCATTGGGAACATAGTTATAGATAGTTGTTTGGAGATATCCAACAATGTTGTTTAATTATATCAAGGTTTTATGAGTGATTTATGAAATGTTGGTTTGTGTGAACATTATAGGAGAAAGCTAGCAATATGATGGACAAAGCAAGTAATGCTGCTCAATCAGCCAAAGAATCAATCCAAGAGACAGGGCAACAAATGCAAGCTAAGGCACAAGGAGCAGCAGATGCTGTCAAGAATACTATGAATAAATGA

mRNA sequence

ATGGCTGACAACTCTCAAAAGATGAGTTACCATGCTGGAGAGGCCAAGGGCCAAGCTCAGGAGAAAGCTAGCAATATGATGGACAAAGCAAGTAATGCTGCTCAATCAGCCAAAGAATCAATCCAAGAGACAGGGCAACAAATGCAAGCTAAGGCACAAGGAGCAGCAGATGCTGTCAAGAATACTATGAATAAATGA

Coding sequence (CDS)

ATGGCTGACAACTCTCAAAAGATGAGTTACCATGCTGGAGAGGCCAAGGGCCAAGCTCAGGAGAAAGCTAGCAATATGATGGACAAAGCAAGTAATGCTGCTCAATCAGCCAAAGAATCAATCCAAGAGACAGGGCAACAAATGCAAGCTAAGGCACAAGGAGCAGCAGATGCTGTCAAGAATACTATGAATAAATGA

Protein sequence

MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVKNTMNK

Homology

[Close]

BLAST of Sed0007664 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 8.6e-19
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQ QEK SNMMDKAS+AAQSAKES+QETGQQM AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60

Query: 61 NTMNK 66
          + +NK
Sbjct: 61 DAVNK 65

[Close]

BLAST of Sed0007664 vs. NCBI nr
Match: XP_021680025.1 (stress-induced protein KIN2-like [Hevea brasiliensis])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQAQEKASNM+D+ASNAAQSAKES+QE GQQMQAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMVDRASNAAQSAKESVQEAGQQMQAKAQGAADAVK 60

Query: 61 NT--MNK 66
          +   MNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0007664 vs. NCBI nr
Match: TYK00593.1 (stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-18
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQ QEKASNMMDKASNAA+SAKESIQE+GQQM AKAQGAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVK 60

Query: 61 NTMNK 66
          + +NK
Sbjct: 61 DAVNK 65

[Close]

BLAST of Sed0007664 vs. NCBI nr
Match: XP_021680122.1 (uncharacterized protein LOC110664655 [Hevea brasiliensis])

HSP 1 Score: 101.7 bits (252), Expect = 2.5e-18
Identity = 56/61 (91.80%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1   MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
           MADNSQKMSYHAGEAKGQAQEKASNM+D+ASNAAQSAKES+QE GQQMQAKAQGAADAVK
Sbjct: 609 MADNSQKMSYHAGEAKGQAQEKASNMVDRASNAAQSAKESVQEAGQQMQAKAQGAADAVK 668

Query: 61  N 62
           +
Sbjct: 669 D 669

[Close]

BLAST of Sed0007664 vs. NCBI nr
Match: GAV60064.1 (hypothetical protein CFOL_v3_03595 [Cephalotus follicularis])

HSP 1 Score: 100.9 bits (250), Expect = 4.2e-18
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQAQEKA  MMDKASNAAQSAKES+QETGQQM+AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKAGTMMDKASNAAQSAKESMQETGQQMKAKAQGAADAVK 60

Query: 61 NT--MNK 66
          +   MNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0007664 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQ QEK SNMMDKAS+AAQSAKES+QETGQQM AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60

Query: 61 NTMNK 66
          + +NK
Sbjct: 61 DAVNK 65

[Close]

BLAST of Sed0007664 vs. ExPASy TrEMBL
Match: A0A5D3BLF3 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002100 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.2e-19
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQ QEKASNMMDKASNAA+SAKESIQE+GQQM AKAQGAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVK 60

Query: 61 NTMNK 66
          + +NK
Sbjct: 61 DAVNK 65

[Close]

BLAST of Sed0007664 vs. ExPASy TrEMBL
Match: A0A1Q3AWN7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03595 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQAQEKA  MMDKASNAAQSAKES+QETGQQM+AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKAGTMMDKASNAAQSAKESMQETGQQMKAKAQGAADAVK 60

Query: 61 NT--MNK 66
          +   MNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0007664 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQAQEKASNMMDKAS+AAQSAKES+QE GQQ++AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 NT--MNK 66
          +   MNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0007664 vs. ExPASy TrEMBL
Match: A0A6P3ZK91 (stress-induced protein KIN2-like OS=Ziziphus jujuba OX=326968 GN=LOC107416496 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-18
Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          MADNSQKMSYHAGEAKG+AQEKA NMMDKASNAAQSAKES+QE GQQM+AKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGRAQEKAGNMMDKASNAAQSAKESVQEAGQQMKAKAQGAADAVK 60

Query: 61 N 62
          +
Sbjct: 61 D 61

[Close]

BLAST of Sed0007664 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-16
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          M+ NSQ +S+ AG+AKGQ QEKAS MMDKASNAAQSAKES++ETGQQ++ KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 NT--MNK 66
          N   MNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Sed0007664 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.7 bits (195), Expect = 9.4e-16
Identity = 43/60 (71.67%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVK 60
          M++NSQ MS++AG+AKGQ QEKASN++DKASNAAQSAKESIQE GQQ++ KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

[Close]

BLAST of Sed0007664 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 3  DNSQKMSYHAGEAKGQAQEKASNMMDKASNAAQSAKESIQETGQQMQAKAQGAADAVKNT 62
          DN Q  SY AG+A GQ +EKA  MMDKA +AA SA++S+Q+TGQQM+ KAQGAAD VK+ 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 --MNK 66
            MNK
Sbjct: 62 TGMNK 66

The following BLAST results are available for this feature:

BLAST of Sed0007664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141485.1	8.6e-19	87.69	late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical...	[more]
XP_021680025.1	1.5e-18	88.06	stress-induced protein KIN2-like [Hevea brasiliensis]	[more]
TYK00593.1	1.9e-18	87.69	stress-induced protein KIN2-like [Cucumis melo var. makuwa]	[more]
XP_021680122.1	2.5e-18	91.80	uncharacterized protein LOC110664655 [Hevea brasiliensis]	[more]
GAV60064.1	4.2e-18	88.06	hypothetical protein CFOL_v3_03595 [Cephalotus follicularis]	[more]

BLAST of Sed0007664 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0007664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN2	4.1e-19	87.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1	[more]
A0A5D3BLF3	9.2e-19	87.69	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1Q3AWN7	2.1e-18	88.06	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03595 PE=4...	[more]
A0A6J1E4Q8	3.5e-18	86.57	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6P3ZK91	4.6e-18	90.16	stress-induced protein KIN2-like OS=Ziziphus jujuba OX=326968 GN=LOC107416496 PE...	[more]

BLAST of Sed0007664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	3.2e-16	70.15	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	9.4e-16	71.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.7e-12	63.08	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	6.10.140.1430		coord: 2..46 e-value: 8.0E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..51
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..63
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007664.1	Sed0007664.1	mRNA