Sed0007640 (gene) Chayote v1

Overview


Name	Sed0007640
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG01: 25642325 .. 25650604 (-)
RNA-Seq Expression	Sed0007640
Synteny	Sed0007640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGAATCTTCTCAAGTCGTCGAGAATGTTCAAGAGCGATTACTCTGCTGAAAAGAATCATCACAAGCCAATGGCGTTGGAGTCTTCAACCAATTCGCACATTTTTCCTCCAATCTTCTTCTCCTCTTCGCGTTCCCTAACATAAACCCTCCTTTTCTCTGCAAATCTCCGTGAGTTTTCCTTTCCACAATGTCCGCCGCCGCCGCCGCCGTCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTCACTGTTTCTGTATCAACCTCCTTGGATCCCCTCTGCCCATTTTGCAACGACGGGTTTCTTGAAGAGTATGAGAATTTGGGCTCCGATGCCAATCTTGATTCTGGGTCAATTTTCATTCCGGATATTTTCAGTGGTTTCCATCCCCTGGTCGTTGATCTCCAAAACCCTGGTTTGTTTTCGAGAACGTTGAATTCGGCTCCCCAGCCTTGGAATAGGAATCGAGTTCAGCCGGAGGTGTTCGATCCCTTTGTTTTTCTTCAGAATCATTTACGGGGCATTTCTGATAGTGGTGCGGATGTTGTGTTTGAAATTCAGGGTAATCCTTCCCACTCAATGCCTCAAAATGTTGGCGATTACTTCATCGGACCTGGCCTCGAGCAGCTCATTCAATTACTGGCTGAGAATGATCCCAACAGGCATGGAACTCCGCCGGCTTCGAAATCGGCTATAGAGAAGCTTCAGACTGTGGCTGTTACAGAGGATCTCTTGAATTCGGAAATGAACCAGTGTGCTGTCTGCATAGAAGAGTTTGAAAAAGGTATTGAGGTTAAACAGATGCCCTGCAAGCATGTATATCACGATCATTGTCTATTGCCTTGGCTTGAATTGCACAATTCATGCCCCGTTTGCCGATTTGAGTTGCCCACAGATGATTCTGATTACGAGAATCGAACTCGTGGTCACCGGGTGCAGGCGAATGAATCTCTTGAAGAAGAATCAGGGTCAGGAAACAGTGGGAGTAGTAGGGAGCGCGTTGCGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCATTTGGGGCCCGGAACGACGGGAGCGACTCCGGTGGTGGAAATGGAAATGAAAGCGAAGGTGATGATAGGCCGTAGGAAAAATACTGATCATCTTCGGGTAACTCTCTTAGTTTTGGCTTTTGCACACTGCTTGCTTTGTTTTTGTTGAATTATGTTAAACCACCAATCAATCCAAAAGCCTAAGCTGATGGATTGAGGTAAATTCAATCATATCAACCAACACTCCCCTCACTTGTGGGCTTTGAAATTTGAAAAATGCCCTACAAGTGGACTTTAATTTTAATTGGGGATGAAATGACTTGGCAGGAATTCGAACTCATGACCTCCTGCTTTGATACCATGTTGAATTATGTTAAATCACCAATCAATCCAAAAGCCTAAGCTGATGGATTGAGGTAAATTTAATTATATCAACCAACAGTTTTTATAGATTACTTTTGTGCTTGACTTATACCATCCGTTTGAAGAGCTTACTTATTGAAGCATTGTTCAAATTTAGTGGCTCTTAAATGCTTGACGCCCAAGTGGGATATACATCCACAACCGTAGTTGAACAGGTCCCTTTAGAAGTGCCCATAAGTAGGGGTGCAACAAAAAACCGGAAAACCGAAAAACCGAACCGAACCAATGGATCGGTTCGGTTTTTTATCACAAAAATGGACATATTGGTTCGAAATTTGAAAAACCGAAAAAATATTGGTTCGGTTCGGTTTTCAAGTTAAAAAACCAATGAAAACCGAACCGAACCAAAAAATATATTTAAATCATAAAAAAACATTTTGTACTAAAACATTATTGAAGCAAAATATTCGCATATCATGTCAGTGGTGTGCTAGTGAAGTTTTGAACAAGTTTTTACTTGATCTTGTGTTCGAACAAGAATTTTTTGTCTTAAAACTCTTCCAATAATAAGTGGTCACACATCCCATTCCTTCCCTCTCCTTTAATTGTGCAGATTTTGCATGTCTAATTTTTCCCTTTAGTTTTTTCATTTTAATTGCTTCATTTTTTTTTTAAATTCTGTTAATTTTGGAATTAATTTTTTTTTATAGAAAATCTACATTTTTAAAAAAAGGAAGAGTCTAACTATATGTAATTTAATAGTCAAATTTTTTTTTGATTTATTAATATATTGGACATCGGTTCGGATCGGATCCAACTATTAAAAAACCGAACCAAATAAAAACCGATCCAATGGTTTTATGCTATATTGGACATCGGTTCGGATTCACTTATTCAAAAACCGAGGATATCGGTTCGGTTGTCGGTTTGACACAAAACCGACAAAAACCGAACCGAAATCACCCCTACCCATAAGCTAATTTGTTGCATAGGTTTTGCTTATGGTATATTTATCCTCTTACGTTAGCCTCTTCCATGGGTGTTGAGTGAAATGGATTACATTGCCTTCCCCCAAAGGGTGGCATAGTGGTCGAAAAGTTTTGAGGTTTGAAGGGTAGCTCTCCTCAAGGTCCCAGGTTTGAGACTCATCTGTCACATTAATTTGTAGACACGCGTGTCTCTGTTCTTTCGATGTCTCTCGGTGCCTGGTCTAGAGACAATTGTGGTTACCTCGGGTATAGTGGAGCGAAACTCCAATTTCTGGTTTTAAAAGAAAGATTACATTACCAACGGCCTAACTGAGAGTTGATTCATGGAATATACAGCTTCGTTGCAGAAAACTTGTTTGTCAACTGTCTAGCCTTAAAAAGAAGGTAGAATAAGACAGAGATGAAGAGAGAAAAAGTAAAAAATGTTTCTTATCTTCGATTTCTAGTATTTTACTTGTTCTGTTTTGAAGTATTTGTTCATAGAACACTCTTGGTGTGATAACTTTATTTGATGTAGACTCAAGTGAAAAAACTTAAATCAACACATATTAAACATATTTCGGTGCACTCAGAAGAAAATCTTAAGGTTGTTTTGCTCTCCAGCTGTACTCACTGAATGAAGGTGTATCTAATGGTTTTGCTAATTTGTGGAGAGAACTTCAATCCGTAAGGGGGATGATGAAATAAATGGCCTATGGCGACTTATCAATTTGTTAAAAATGGAAACTTAGTATTATGACTAGAATGATGCGACAGCTGCTACTAGTACCTTGTGATTATAAAGTCATGTTCCTATGGACGTTTGAAAGGAACAAAAGCTTGAAATCAGTAATAGGCAACATGAAATTTCATTAAAAAAACTCCAAAGAATTAAAGGATCTTCCGATGATTATAACAAATTTCTCTTAAAAATTCAAAGGTTACCGAAGACAGTAGGGGACAGGAAATACGACACCAACCCATCTGAAGTTGAACTAATTTACAAATAACATTCAAGTATCGTAATTACAAAGACAGATAAACGACAACAGAAATGCAAACTGCAAATATTCAAAATCTCACTTGGAAGTCTTGAAAATGCTTGGACTTTCAGCAGAGATCGGTGCTCCCTGTTTTAAAAAAGAATGCTTTCTATCAGGGTTAGACATTGGCTAAGCCAACAACTATTCGTACCAAACCAACGATTTTAAACTAATTAAACTTAACTGATTTGGATTTTGTGTTTTTATTTCCGGGCTGTGAGTCTTTATTAATCTTAACTTTAATTTCATAGTGAACCAAATCATTTTGGATCACAATGGTGACATTTGGATTTGGGCCTTATGGATGCCAGTTCATTTTGTATCAGAATTCCTCTTCTTGTTCATATTTTCTTTCAAAATTATGGCCTATGGGTAAGTAATTTACCTTGAGCCGGAAAAAAAAAGAAAAATGAAAGAATCATTGTATGTAAAGTTTGGTCACACTTTCTTATGTTTGTTTGCATAGATTCTGACATCGCTTCTATTAATATTTGAGGTTATAGGTTATTTGAAGCTTCTGTCTATGCAGAGTCGATGTGTGTAAGAGATGCAGGCTTATCCTACATCTTGATAAGCCTACCCTTGGAGGAGTATTTTCCTAGTATTTGATTGGGATCTCTCTTTTATCAATATTCCCTACTCTATAAATGATTACAAATATGAACAGATAAATGGTACGGCATGATGATACTGGAAGTATCTTAGTATTAGATGACGATCTTGCTAACTTGAAAACTACTTTCCTTGACCAAGACCTGAAAAGCATAGACCGCAACTATAGCTAAAAAGAAAACAAAATGGACGCTACACCTCAGTCCATTATTACTCGATATCTGCCTCAACAAGGAGATTGGGGTCAAGTACCCTAAAATGATATTTCCAATTGATAGTTTGTTTTCTTCGAAAAAGAAAAGGTTCGAAGCTTTGGCGCTACAAAACATCATATAGTGGGCTTTGGAAAGGCACGATACCTAGATGTGTTTCGATACAAATTTTACTAGGATTTATCTCCAAAGGTAGCATAGTGATTGAAGGTTTGAGTTTTGAAGGTATGCTCCTCTCAAGGTTTCAGATTCAAGACTCACTTGTGACTTTAGTTTGTAGACACCTCCTGTGTCTCCATTCCTTTGATGTCTCTCGGTGTTTGGCCTAGGACAAGCATGGTTATATCGAGTATTGTGGAGTGAAACTCTGATTTTCTAGTTCCAAAGAAAAAAAAATCTTATTAGGATTTCTTTTATCCATCGTTGTAGTTTTCCTTTCTTTTTTGCTGGTGTTAACAGATTATGGAGAAGATCACAATCCTTTCAAACTCATTAACACCCATTTTAGACATACATTATTAGGATTGAGTTCACTTTCTTTATATTTTCTATTTTTTAATATGTTTTGAGTGTTTGGTTATTTTATACGCACTTTGACTATTATAATGAGATAATTTGTCTATCCTTACAAATATAGTTTTTTGTCCAGAAAATTTATAGGAAATTAATTCTTAGGTTGGTCGTTATCATAGACTGAATTTATAACCTCTTAGTTTTCTACTACTTTTGATTCTTAGGTTGGTCGTTATCATAGACTGAATTTATAACCTCTTAGTTTCCTCCTACTTTTGAACTCTTTGCCAACTTGTGACAGTTGACCATGGGATCAAGGCTGCATTATTTGGGTTTTCTAATCGTCAGAGCCTTTTAAATAGTTCCACTTTCTTATCTCATCAATATATGGTAGTGATAGACTTATGTAACACTTTTTTTTTTTTTTTTTAATTCTAATTGGGGAGTGGACAAAAAATCCTACATAGCAAATAAGATCAGAGCCAAATACCGATTTTTAAGATCGAATCTGTAATTGGGGAGTTGAATTAAATTACAACCTATCAACCAAGTCAACAAGTCACCAACTCTTTCCCTTTCAGTGAATTATGACTTAAGTACCACTTGCATTCATATCTTATCAATATTTTTTTCCGTTGTGTCTTGTAGTGGTAGACTTATGTAACATTTGCATTCGGTGTATTATTTGTTTTTAGGTCTAGTATCTCGCCTTGAATAAATGAGACTTGGATAAATATGTACGCTATAGGCTAATGCACCTTCCTGTGAAGTTCTAAGGCGTTGTGCATATGCCTTTGATTAATTATATAATAAAAAATAAAAAATAAAATTTACCAACCCTAACGTTTACAATTTCCTGTGAAGTCTTGTTTAGTTTTCTTTGTGTTCTTTACTAATTAAAAAATAACGTTTATTAACCGTTAGGGTTTTTTTCCTTATCATTTCCACTTCAATGTTATGAGTGTTCTTATGTGCTTTGTGCCTCAGAGAGTTAGAAATGTCCGATCTTTTTTTTAGTGATTTACCCTTAAGCTCTAGAAGGTTTAGTGCGCTTTGAGTTCTTAAAAAGCATCAATATATAGGTATAGGTAGTTCAGTGTCTTGAAATGAAAGAAAGTTCAAAATAATTTATGCCCGTATTTTTAATGTATTTGATTCACAATTTTTATGTTTCTCTTGGTCTTATTTTTTTGAGCCCATGTATTCAGAAAAAAAGAACCAGCGTTGTGATAGTGTTGGGTGTTAATAGAAATAGGAATAATATAAAGGTATGCTAGCAATTACTTGGAATAAGTTGCAATTACTTGGGAAGTAAGAGTATTTTATTATAAATAGAGAGGATTATGGTAGGGTTTAGGCATCCAATTATTAAGTAATTATTGAGTGAATTGGTGTAGGGCTCATAGAGAGTATTCCCTTGAGAGAGGAGGTTCCAAGACCTATCAAATCTTGGTTTATCTTGTATTTGTTTACCTTTTTTATATAATCTAGATCCTAGATCATATCAATTGGTATCAGAGCCGTTTCGATTATTGGTTGTAGAGATGGATCAAGAAAATGTTTGTTTATTTCAAGAAATGTGGCAAAGTTTTTACAATGACACAAAAAGTTGTTTTAGAGAGATAAGGGAGGAGAGTGCAAAGGAGCGGGAACGAACAGGAGGAGTAGTCCAAGGCAAGGGAACAATGGTACTCAGAGATGGAAGCTTGGAATCGAGGAAGAAGGGAGGTTGTGGAAGAAACAGTGATGGCTAGGGTTTTGACATCGCCGCTACCACCGTCGTCGCCTTTGCGCCCCCACCCCTGCCACCACCACCGCCACCGCCGCCACCACCGCTGCTGTCATCGACGTACCACTGCCACTGCCGCCGCCACTGCTGCCACCCCCACCACCACCGCCACCAATGCACCACCGTAGATGACTTGAATGTTGTAAGCATCAAATGGCTTGGCTAAAGAACACTATGAAGAGGCCTTAAGCTTCATAATATCAAACCGCTGCTGTTAAGACAAATGAGAGTCGAGAAATATTCGTTAGTTCCTCTTCAACTACATCTCATACATTAGAGTTTTAACAGCATTGATCCAGAGTAGCCTGCCTGGTTTATTCAATCTAGGTCTCTCCAAGATACCTTGCACATTAGATCGAACAGAGTTATCAAATTCCCAGCTGATTCCAAAGATTTCCATGAGCTGATTCCAACATGATGCCGAGTAAAAACACTGAAATAGAATGTGGTTGATTCAACATTCGAATTGCACAGAGGACACATGGAAGGCATCAAGGCTTGGTTTTGTAGCTTCTTTTGCAATGAATCTGAAGTATTCAAATTGCACATTCATTATTTGTTATCAACCATCACTAGCTTATTGAGGATGAGAGTTTTTCTTAGGTGTTTGTTATTTTAGGTGTTTGGACATCTTACGAGTACATTAGAAAGTATTTGACATGCGTCTATGCAGATTGAGGTTAATGATTTGTCTAGGTTTGGTACATAGGTTTGTTTATCTCAAATGGTAGATTGCGGATTTGATGATCCCATGAGCTATACACAGATTTTTTGAGTTCTATAGTTTGGGTGGAGATTCGAAATATTGCTTTCGAATTTTTTAACTAGCTGAGCTATTCTTAGATTGATCATGAGCTGAGCTTACAAAATGTATCTCATTTTTTTTCTTCAAAAAAAGAAGTATCCTTTATGATCTATCTTAATTTGTTTTATGTCTGTAAGTTTATCTTTTTTTTGGGTAAGTTTATCATCTTATTCTTTTCTTTGTAAGCGCACACTTGAGTGTGTATCGTATAAATCAAACATAAAAACTTGCTCATACCGTGATCTATACTGTTGTCAACTTCATTAGTGGTTGTATTAAGAGTTGATTACGCTGAGATTATGACATTAATGAAATGAGCATCCAGTTTCTAGTAGAAGTGATCCTCGCCATTGATTCTGGCAATTTGTGCCCCTAAAGGGGTGGGGCAGTGATTGAAGACTTGGGCTTTGAGGGTATGCTCTCCTCAAAGTTTCGAGTTCGAGTCTTTCTTGTGACAATATTTCTTCGATGTCTCCGGTGTTTGGCCTAGAGACAGGTGTGGATACCCTTGTTTCAAATAAGATTATGGCAATTTGCACCGTCTTTGATAAAATATTCCTAACCATTGTTTGAATCTGTTTTTCAGGCAAAAGGGGCTCCTATTTTGAGGCATTTTTAGGGAATTTCAGCTGAAAAAATACACAGAAAAGTTGGTCTATGGCTTTTAGTTGTCTTTTGTTTGTTTTCTTTTTAATGAAAATTTTGTTTCAAAATGCCAACAACATCATGTATAGATCTGTTCATTCTGGATTACTTTTCTTTTGTCAACGTAGAATGTGTACACATTCCATATCTCGTTGCTCGTTTGGTTTCATAGTTCTGCATTTTCTATCTGTGAGCTTCTCAGTTTTACTAAACTGTATAGGCTAGGCTGAGATCTTGTTTGGTTTCATAGGTCTTACAAATTGTTTAAAAACAACCTTATTTTTGTAAGAAGTTTTTGCAAGTA

mRNA sequence

CTAGAATCTTCTCAAGTCGTCGAGAATGTTCAAGAGCGATTACTCTGCTGAAAAGAATCATCACAAGCCAATGGCGTTGGAGTCTTCAACCAATTCGCACATTTTTCCTCCAATCTTCTTCTCCTCTTCGCGTTCCCTAACATAAACCCTCCTTTTCTCTGCAAATCTCCGTGAGTTTTCCTTTCCACAATGTCCGCCGCCGCCGCCGCCGTCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTCACTGTTTCTGTATCAACCTCCTTGGATCCCCTCTGCCCATTTTGCAACGACGGGTTTCTTGAAGAGTATGAGAATTTGGGCTCCGATGCCAATCTTGATTCTGGGTCAATTTTCATTCCGGATATTTTCAGTGGTTTCCATCCCCTGGTCGTTGATCTCCAAAACCCTGGTTTGTTTTCGAGAACGTTGAATTCGGCTCCCCAGCCTTGGAATAGGAATCGAGTTCAGCCGGAGGTGTTCGATCCCTTTGTTTTTCTTCAGAATCATTTACGGGGCATTTCTGATAGTGGTGCGGATGTTGTGTTTGAAATTCAGGGTAATCCTTCCCACTCAATGCCTCAAAATGTTGGCGATTACTTCATCGGACCTGGCCTCGAGCAGCTCATTCAATTACTGGCTGAGAATGATCCCAACAGGCATGGAACTCCGCCGGCTTCGAAATCGGCTATAGAGAAGCTTCAGACTGTGGCTGTTACAGAGGATCTCTTGAATTCGGAAATGAACCAGTGTGCTGTCTGCATAGAAGAGTTTGAAAAAGGTATTGAGGTTAAACAGATGCCCTGCAAGCATGTATATCACGATCATTGTCTATTGCCTTGGCTTGAATTGCACAATTCATGCCCCGTTTGCCGATTTGAGTTGCCCACAGATGATTCTGATTACGAGAATCGAACTCGTGGTCACCGGGTGCAGGCGAATGAATCTCTTGAAGAAGAATCAGGGTCAGGAAACAGTGGGAGTAGTAGGGAGCGCGTTGCGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCATTTGGGGCCCGGAACGACGGGAGCGACTCCGGTGGTGGAAATGGAAATGAAAGCGAAGGTGATGATAGGCCGTAGGAAAAATACTGATCATCTTCGGGCAAAAGGGGCTCCTATTTTGAGGCATTTTTAGGGAATTTCAGCTGAAAAAATACACAGAAAAGTTGGTCTATGGCTTTTAGTTGTCTTTTGTTTGTTTTCTTTTTAATGAAAATTTTGTTTCAAAATGCCAACAACATCATGTATAGATCTGTTCATTCTGGATTACTTTTCTTTTGTCAACGTAGAATGTGTACACATTCCATATCTCGTTGCTCGTTTGGTTTCATAGTTCTGCATTTTCTATCTGTGAGCTTCTCAGTTTTACTAAACTGTATAGGCTAGGCTGAGATCTTGTTTGGTTTCATAGGTCTTACAAATTGTTTAAAAACAACCTTATTTTTGTAAGAAGTTTTTGCAAGTA

Coding sequence (CDS)

ATGTCCGCCGCCGCCGCCGCCGTCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTCACTGTTTCTGTATCAACCTCCTTGGATCCCCTCTGCCCATTTTGCAACGACGGGTTTCTTGAAGAGTATGAGAATTTGGGCTCCGATGCCAATCTTGATTCTGGGTCAATTTTCATTCCGGATATTTTCAGTGGTTTCCATCCCCTGGTCGTTGATCTCCAAAACCCTGGTTTGTTTTCGAGAACGTTGAATTCGGCTCCCCAGCCTTGGAATAGGAATCGAGTTCAGCCGGAGGTGTTCGATCCCTTTGTTTTTCTTCAGAATCATTTACGGGGCATTTCTGATAGTGGTGCGGATGTTGTGTTTGAAATTCAGGGTAATCCTTCCCACTCAATGCCTCAAAATGTTGGCGATTACTTCATCGGACCTGGCCTCGAGCAGCTCATTCAATTACTGGCTGAGAATGATCCCAACAGGCATGGAACTCCGCCGGCTTCGAAATCGGCTATAGAGAAGCTTCAGACTGTGGCTGTTACAGAGGATCTCTTGAATTCGGAAATGAACCAGTGTGCTGTCTGCATAGAAGAGTTTGAAAAAGGTATTGAGGTTAAACAGATGCCCTGCAAGCATGTATATCACGATCATTGTCTATTGCCTTGGCTTGAATTGCACAATTCATGCCCCGTTTGCCGATTTGAGTTGCCCACAGATGATTCTGATTACGAGAATCGAACTCGTGGTCACCGGGTGCAGGCGAATGAATCTCTTGAAGAAGAATCAGGGTCAGGAAACAGTGGGAGTAGTAGGGAGCGCGTTGCGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCATTTGGGGCCCGGAACGACGGGAGCGACTCCGGTGGTGGAAATGGAAATGAAAGCGAAGGTGATGATAGGCCGTAG

Protein sequence

MSAAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDIFSGFHPLVVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVFLQNHLRGISDSGADVVFEIQGNPSHSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARNDGSDSGGGNGNESEGDDRP

Homology

[Close]

BLAST of Sed0007640 vs. NCBI nr
Match: XP_023554317.1 (E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554326.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554330.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554338.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554347.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554356.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554365.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554375.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554385.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554392.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554402.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.3 bits (1305), Expect = 9.4e-140
Identity = 249/314 (79.30%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+PD 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNRN+     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSRSGVSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VTEDLLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTEDLLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSGSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. NCBI nr
Match: KAG7032683.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.4 bits (1295), Expect = 1.4e-138
Identity = 246/314 (78.34%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+PD 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNRN+     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQN+GDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VT++LLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTDELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSGSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. NCBI nr
Match: KAG6601985.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 503.4 bits (1295), Expect = 1.4e-138
Identity = 246/314 (78.34%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+PD 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNRN+     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQN+GDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VT++LLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTDELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSGSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. NCBI nr
Match: XP_022990139.1 (E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 502.7 bits (1293), Expect = 2.3e-138
Identity = 248/314 (78.98%), Postives = 266/314 (84.71%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+ D 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLLDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNRN+     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPS---HSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSLSGVSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VTEDLLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTEDLLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSSSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. NCBI nr
Match: XP_022960730.1 (E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 502.7 bits (1293), Expect = 2.3e-138
Identity = 246/314 (78.34%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+PD 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNR++     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRHQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQN+GDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VTE+LLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTEELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSGSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-85
Identity = 175/329 (53.19%), Postives = 211/329 (64.13%), Query Frame = 0


Query: 3   AAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYE----NLGSDANLDSG 62
           +AAAA  VDK FFC+QC++ VT+S+S+S DP CP CN GFLEEYE    N   + N +S 
Sbjct: 10  SAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSS 69

Query: 63  SIFIP--DIFSGFHPLVV--------DLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVF 122
             F P  D FS   PL+          +    LF  ++    +   +N  Q + FDPF F
Sbjct: 70  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQN-PQSDAFDPFTF 129

Query: 123 LQNHLRGISDSGADVVFEIQGNPS---HSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGT 182
           LQNHL+ +  SG    F I+ +PS   + MP N GDYF GPGLEQLIQ LAENDPNR+GT
Sbjct: 130 LQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGT 189

Query: 183 PPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLE 242
           PPASKSAI+ L TV VT+D+L SEMNQCAVC++EFE G +VKQMPCKHV+H  CLLPWLE
Sbjct: 190 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLE 249

Query: 243 LHNSCPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWW 302
           LHNSCPVCRFELPTDD DYENR++G          + SG G  GS   +   RF + L W
Sbjct: 250 LHNSCPVCRFELPTDDPDYENRSQG---------SQGSGDG-QGSVEGQQTPRFSIQLPW 309

Query: 303 PFGARNDGSDSG------GGNGNESEGDD 309
           PF  R DGS SG      GG   E+ G+D
Sbjct: 310 PF-RRQDGSGSGSGAPGTGGGNLETRGED 326

[Close]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-81
Identity = 167/324 (51.54%), Postives = 201/324 (62.04%), Query Frame = 0


Query: 11  DKPFFCHQCDRAVTVSVS-TSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFI-PDIFS- 70
           +KPFFC+QC+R V V++S  S DP CP CN+GFLEEY+N     N + GS F+ P+  S 
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDN----PNPNQGSGFLNPNPNSI 79

Query: 71  GFHPLVVDLQN----------PGLFSRTLNSAPQ----------PWNRNRVQPEVFDPFV 130
            FH L + L +          P   S T +S+            P    R  P  FDPF 
Sbjct: 80  PFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFT 139

Query: 131 FLQNHLRGISDSGADVVFEIQGNPSHS---MPQNVGDYFIGPGLEQLIQLLAENDPNRHG 190
           F+QNHL  +  SGA + F IQ NPS     +P N+GDYFIGPGLEQLIQ LAENDPNR+G
Sbjct: 140 FIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYG 199

Query: 191 TPPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWL 250
           TPPASKSAIE L  V +T+  LNSE NQCAVC+++FE+G E KQMPCKH+YH  CLLPWL
Sbjct: 200 TPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWL 259

Query: 251 ELHNSCPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLW 309
           ELHNSCPVCR ELPTDD DYE R RG +  +  +  + SG  + G +R  V R FR+ L 
Sbjct: 260 ELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR-TVERSFRISLP 319

[Close]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-36
Identity = 105/314 (33.44%), Postives = 155/314 (49.36%), Query Frame = 0


Query: 15  FCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLD-----------SGSIFIP 74
           +CH+C RAV +      +P+C +C  GF+EE + +   +  D             +  + 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTFDLM 68

Query: 75  DIFSGF--HPLVVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVF-LQNHLRGISDSG 134
           D FS F  + L     +  +  RT++S P+ +      P +    +F  Q   R   D+ 
Sbjct: 69  DAFSVFMRNRLAERSHDREIRGRTISSGPENF------PGLAPLLIFGGQVPYRLTGDNA 128

Query: 135 ADVVFEIQGNPSHSMPQ-NVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTV 194
            + +F   G+P   + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L T+
Sbjct: 129 VEALFN-GGSPGIGITRGNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTI 188

Query: 195 AVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELP- 254
            + +  L S  + C VC +EFE G E KQMPC H+YH  C++PWL  HNSCPVCR ELP 
Sbjct: 189 KIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 248

Query: 255 -TDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPF---GARNDGS 309
            +  S  +NRT   R   + S    S S  +G+ R      F     WPF   G+ +  +
Sbjct: 249 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSF-----WPFRSSGSSSSST 305

[Close]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.7e-33
Identity = 101/299 (33.78%), Postives = 141/299 (47.16%), Query Frame = 0


Query: 15  FCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLD---SGSIFIPDIFSGF-H 74
           +CH+C RAV +    + D +C +C  GF+EE +   S A+ D     +  + + FS F  
Sbjct: 9   WCHRCQRAVWL---RARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 68

Query: 75  PLVVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFD---PFVFLQNHLRGISDSGADVVFEI 134
             + +       S  L SA      N     +F    PF      L G  D+ +   F  
Sbjct: 69  SRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPF-----RLAG-GDNSSVEAFVN 128

Query: 135 QGNPSHSMPQ--NVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTVAVTEDL 194
              P   + +  N GDYF GPGLE+LI+ L+    +R G PPA KS+I+ L T+ +T+  
Sbjct: 129 GAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKH 188

Query: 195 LNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELPTDDSDYE 254
           L S  + C VC +EFE   E KQMPC H+YH  C++PWL  HNSCPVCR ELP+  S   
Sbjct: 189 LKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGS--- 248

Query: 255 NRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARNDGSDSGGGNGNES 305
                       S   +S    S + RE   RR      WPF + +  S     + N +
Sbjct: 249 ------------SSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNT 282

[Close]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 90/289 (31.14%), Postives = 142/289 (49.13%), Query Frame = 0


Query: 14  FFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI-FSGFHPL 73
           ++CH+C++A+  ++   +   CP C  GF+EE     +D  ++  +   P+  FS ++P 
Sbjct: 9   YWCHECEQAIEEAMVDEIK--CPSCGGGFVEEM----TDEEIERLTNRQPEPGFSQWNP- 68

Query: 74  VVDLQNPG--------------LFSRTLNSAPQPWNRNRVQPEVFDPFVFLQNHLRGISD 133
              +++PG               F   +    +     RV   + D     Q     I  
Sbjct: 69  ---IEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILI 128

Query: 134 SGADVVFEIQG---NPSHSMPQNVG---------DYFIGPGLEQLIQLLAENDPNRHGTP 193
           +  +    +QG   +P        G         +Y +G GL  L+Q LAE+DP+R+GTP
Sbjct: 129 NAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTP 188

Query: 194 PASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLEL 253
           PA K A+E L TV +       E+  C+VC+++ E G + KQMPC+H +H  C+LPWLEL
Sbjct: 189 PAKKEAVEALPTVKI------EEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLEL 248

Query: 254 HNSCPVCRFELPTDDS-DYENRTRGHRVQANESLEEESGSGNSGSSRER 275
           H+SCPVCRFELP++++ D    +   RV+ +       G GN   S  R
Sbjct: 249 HSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNR 281

[Close]

BLAST of Sed0007640 vs. ExPASy TrEMBL
Match: A0A6J1JR94 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487122 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.1e-138
Identity = 248/314 (78.98%), Postives = 266/314 (84.71%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+ D 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLLDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNRN+     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPS---HSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSLSGVSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VTEDLLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTEDLLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSSSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. ExPASy TrEMBL
Match: A0A6J1H9Y0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.1e-138
Identity = 246/314 (78.34%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 6   AAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDI 65
           ++ AVDK FFCHQCDR VTV+VS SL+PLCPFCN+GFLEEY+   S+ANLDS S F+PD 
Sbjct: 2   SSAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDP 61

Query: 66  FSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRV----QPEVFDPFVFLQNHLRG 125
           F  F+PL      VVDLQNPGLFSRTL+ A Q WNR++     QPE FDPFVFLQNHLRG
Sbjct: 62  FRDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRHQSDSSGQPEPFDPFVFLQNHLRG 121

Query: 126 ISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 185
           I DSGADVVFEIQG+PS    SMPQN+GDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA
Sbjct: 122 IFDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSA 181

Query: 186 IEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPV 245
           IEKLQ V VTE+LLNSEMNQCAVC++ FEKGIEVKQMPCKH++HD+CLLPWLELHNSCPV
Sbjct: 182 IEKLQNVTVTEELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPV 241

Query: 246 CRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGARND 305
           CRFEL TDDSDYENRTRG RVQANES  EE GSGNSGSS ERV R FRVPLWWPFG RND
Sbjct: 242 CRFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRND 301

Query: 306 GSDSGGGNGNESEG 307
           GS SGGGN +E EG
Sbjct: 302 GSGSGGGNDSEGEG 315

[Close]

BLAST of Sed0007640 vs. ExPASy TrEMBL
Match: A0A6J1CK28 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111011877 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 243/322 (75.47%), Postives = 269/322 (83.54%), Query Frame = 0


Query: 1   MSAAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDAN--LDSG 60
           ++A A +   DKPFFCHQCDRAVT++VSTS DPLCPFCN+GFLEEYEN  SD+N  LD  
Sbjct: 7   LAAGANSADRDKPFFCHQCDRAVTITVSTSSDPLCPFCNEGFLEEYENSYSDSNDDLDRA 66

Query: 61  SIFIPDIFSGFHPL-------VVDLQNPGLFSRTLNSAPQPWNRNR----VQPEVFDPFV 120
            I  PD F GF+PL       V+DLQNPGLFSRT+  A QPWNRN+    +QPE FDPF+
Sbjct: 67  PIHFPDPFRGFNPLVFSSSSSVIDLQNPGLFSRTMRPASQPWNRNQSDSTIQPEPFDPFL 126

Query: 121 FLQNHLRGISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHG 180
           FLQNHLRGI DSGADVVFEIQG+PSH   SMPQNVGDYF+GPGLEQLIQLLAENDPNR+G
Sbjct: 127 FLQNHLRGIFDSGADVVFEIQGHPSHSVLSMPQNVGDYFVGPGLEQLIQLLAENDPNRYG 186

Query: 181 TPPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWL 240
           TPPASKSAIEKL  V VTEDLLNSEMNQCAVCI+EF+ GI+VKQMPCKHV+HD CLLPWL
Sbjct: 187 TPPASKSAIEKLPAVTVTEDLLNSEMNQCAVCIDEFQIGIKVKQMPCKHVFHDDCLLPWL 246

Query: 241 ELHNSCPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLW 300
           ELHNSCPVCRFELPTDDSDYENRTRG RVQ NE+  ++SG  NSGS  ERV RRFRVPLW
Sbjct: 247 ELHNSCPVCRFELPTDDSDYENRTRGRRVQENEASGQQSGLDNSGSG-ERVERRFRVPLW 306

Query: 301 WPFGARNDGSDSGGGNGNESEG 307
           WPFG RN+GSDSGGGN +E +G
Sbjct: 307 WPFGGRNEGSDSGGGNDSEEDG 327

[Close]

BLAST of Sed0007640 vs. ExPASy TrEMBL
Match: A0A6J1FJU6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 240/314 (76.43%), Postives = 264/314 (84.08%), Query Frame = 0


Query: 1   MSAAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDA--NLDSG 60
           M + A+  AVDKPFFCHQCDRAVTV VS S DPLCPFCN+GFLEEYEN  S++  NLD G
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRG 60

Query: 61  SIFIPDIFSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVFLQNH 120
           ++ +PD F GF+PL      VVDLQNPGLFSRTL+ A Q  + + VQPE +DPFVFLQNH
Sbjct: 61  TLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQ--SNSSVQPEPYDPFVFLQNH 120

Query: 121 LRGISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPAS 180
           LRGI DSGADVVFEI  + SH   SMPQNVGDYFIGPGLEQLIQLLA+NDPNR+GTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNS 240
           KSAIEKL TV VTEDLLNSEMNQCAVCI+ FEK  +VKQMPCKHV+HD+C+LPWLELHNS
Sbjct: 181 KSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGA 300
           CPVCRFELPTDDSDYENRTRG +VQANES  EESGSGN GS+  RV RRFRVPLWWPFG 
Sbjct: 241 CPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDSGGGNGNE 304
           RNDGSDSG GN +E
Sbjct: 301 RNDGSDSGDGNVSE 312

[Close]

BLAST of Sed0007640 vs. ExPASy TrEMBL
Match: A0A6J1K1C4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.9e-132
Identity = 238/314 (75.80%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 1   MSAAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDA--NLDSG 60
           M + A+  AVDKPFFCHQCDRAVTV +S S DPLCPFCN+GFLEEYEN  S++  NLD G
Sbjct: 1   MFSTASLAAVDKPFFCHQCDRAVTVILSPSSDPLCPFCNEGFLEEYENSNSNSNVNLDRG 60

Query: 61  SIFIPDIFSGFHPL------VVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVFLQNH 120
           ++ +PD F GF+PL      VVDLQNPGLFSRTL+ A Q  + + VQPE +DPFVFLQNH
Sbjct: 61  TLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQ--SNSSVQPEQYDPFVFLQNH 120

Query: 121 LRGISDSGADVVFEIQGNPSH---SMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPAS 180
           LRGI DSGADVVFEI  + SH   SMPQNVGDYFIGPGLEQLIQLLA+NDPNR+GTPPAS
Sbjct: 121 LRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 180

Query: 181 KSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNS 240
           KS IEKL  V VTEDLLNSEMNQCAVCI+ FEK  EVKQMPCKHV+HD+C+LPWLELHNS
Sbjct: 181 KSVIEKLPNVTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNS 240

Query: 241 CPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPFGA 300
           CPVCRFELPTDDSDYENRTRG +VQANES  EESGSGN GS+R RV RRFRVPLWWPFG 
Sbjct: 241 CPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNRGRVERRFRVPLWWPFGG 300

Query: 301 RNDGSDSGGGNGNE 304
           RNDG+DSG GN +E
Sbjct: 301 RNDGNDSGDGNVSE 312

[Close]

BLAST of Sed0007640 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-86
Identity = 175/329 (53.19%), Postives = 211/329 (64.13%), Query Frame = 0


Query: 3   AAAAAVAVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYE----NLGSDANLDSG 62
           +AAAA  VDK FFC+QC++ VT+S+S+S DP CP CN GFLEEYE    N   + N +S 
Sbjct: 10  SAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSS 69

Query: 63  SIFIP--DIFSGFHPLVV--------DLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVF 122
             F P  D FS   PL+          +    LF  ++    +   +N  Q + FDPF F
Sbjct: 70  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQN-PQSDAFDPFTF 129

Query: 123 LQNHLRGISDSGADVVFEIQGNPS---HSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGT 182
           LQNHL+ +  SG    F I+ +PS   + MP N GDYF GPGLEQLIQ LAENDPNR+GT
Sbjct: 130 LQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGT 189

Query: 183 PPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLE 242
           PPASKSAI+ L TV VT+D+L SEMNQCAVC++EFE G +VKQMPCKHV+H  CLLPWLE
Sbjct: 190 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLE 249

Query: 243 LHNSCPVCRFELPTDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWW 302
           LHNSCPVCRFELPTDD DYENR++G          + SG G  GS   +   RF + L W
Sbjct: 250 LHNSCPVCRFELPTDDPDYENRSQG---------SQGSGDG-QGSVEGQQTPRFSIQLPW 309

Query: 303 PFGARNDGSDSG------GGNGNESEGDD 309
           PF  R DGS SG      GG   E+ G+D
Sbjct: 310 PF-RRQDGSGSGSGAPGTGGGNLETRGED 326

[Close]

BLAST of Sed0007640 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.8e-41
Identity = 111/313 (35.46%), Postives = 153/313 (48.88%), Query Frame = 0


Query: 9   AVDKPFFCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLDSGSIFIPDIFSG 68
           AV   ++CH C + V   +   +   CPFC  GF+EE E+     + D   +   +  S 
Sbjct: 4   AVVTRYWCHMCSQTVNPVMEAEIK--CPFCQSGFVEEMEDDDDHDSSDPADVRANN--SL 63

Query: 69  FHPLVVDLQNPGLFSRTLNSAPQ-PWNRNRVQPE------VFDPFVFLQNHLRGISDSGA 128
           + P++++L N  +  R   S      N+N VQ E        D    LQ  LR      A
Sbjct: 64  WAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHSA 123

Query: 129 DVVFEIQG-----------------NPSH--------------------SMPQ-NVGDYF 188
            V+  +QG                 NP                      S+P  ++GDYF
Sbjct: 124 AVLQLLQGIRAGLSVESESTGNGGNNPGRVILINTSNQTITVQNSADMDSVPAGSLGDYF 183

Query: 189 IGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTVAVTEDLLNSEMNQCAVCIEEFEKG 248
           IGPG E L+Q LAENDPNR+GTPPA K A+E L TV + E L      QC+VC+++FE G
Sbjct: 184 IGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCLDDFEIG 243

Query: 249 IEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELPTDD--SDYENRTRGHRVQANESLEE 275
            E K MPC H +H  CLLPWLELH+SCPVCR++LP D+  +D    T  +   ++ S   
Sbjct: 244 TEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSSSASATT 303

[Close]

BLAST of Sed0007640 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 5.3e-40
Identity = 89/191 (46.60%), Postives = 114/191 (59.69%), Query Frame = 0


Query: 130 NPSHSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTVAVTEDLLNSE 189
           N +H    ++GDYFIGPGL+ L+Q LAENDPNR GTPPA K A+E L TV + E L    
Sbjct: 202 NQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL---- 261

Query: 190 MNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELPTD-DSDYENRT 249
             QC+VC+++FEKG E K+MPCKH +H  C++PWLELH+SCPVCRFELP+  D D E +T
Sbjct: 262 --QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKT 321

Query: 250 RGHRVQANESLEEESGS------GNSGSSRERV-----ARRFRVPLWWPFGARNDGSDSG 309
              RV    ++ E S        GN+   RE        RRF  P  WPF      S S 
Sbjct: 322 DSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSSS 381

[Close]

BLAST of Sed0007640 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-37
Identity = 105/314 (33.44%), Postives = 155/314 (49.36%), Query Frame = 0


Query: 15  FCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLD-----------SGSIFIP 74
           +CH+C RAV +      +P+C +C  GF+EE + +   +  D             +  + 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTFDLM 68

Query: 75  DIFSGF--HPLVVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVF-LQNHLRGISDSG 134
           D FS F  + L     +  +  RT++S P+ +      P +    +F  Q   R   D+ 
Sbjct: 69  DAFSVFMRNRLAERSHDREIRGRTISSGPENF------PGLAPLLIFGGQVPYRLTGDNA 128

Query: 135 ADVVFEIQGNPSHSMPQ-NVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTV 194
            + +F   G+P   + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L T+
Sbjct: 129 VEALFN-GGSPGIGITRGNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTI 188

Query: 195 AVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELP- 254
            + +  L S  + C VC +EFE G E KQMPC H+YH  C++PWL  HNSCPVCR ELP 
Sbjct: 189 KIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 248

Query: 255 -TDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPF---GARNDGS 309
            +  S  +NRT   R   + S    S S  +G+ R      F     WPF   G+ +  +
Sbjct: 249 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSF-----WPFRSSGSSSSST 305

[Close]

BLAST of Sed0007640 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-37
Identity = 105/314 (33.44%), Postives = 155/314 (49.36%), Query Frame = 0


Query: 15  FCHQCDRAVTVSVSTSLDPLCPFCNDGFLEEYENLGSDANLD-----------SGSIFIP 74
           +CH+C RAV +      +P+C +C  GF+EE + +   +  D             +  + 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTFDLM 68

Query: 75  DIFSGF--HPLVVDLQNPGLFSRTLNSAPQPWNRNRVQPEVFDPFVF-LQNHLRGISDSG 134
           D FS F  + L     +  +  RT++S P+ +      P +    +F  Q   R   D+ 
Sbjct: 69  DAFSVFMRNRLAERSHDREIRGRTISSGPENF------PGLAPLLIFGGQVPYRLTGDNA 128

Query: 135 ADVVFEIQGNPSHSMPQ-NVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAIEKLQTV 194
            + +F   G+P   + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L T+
Sbjct: 129 VEALFN-GGSPGIGITRGNTGDYFFGPGLEELFEQLSAG-TTRRGPPPAPRSAIDALPTI 188

Query: 195 AVTEDLLNSEMNQCAVCIEEFEKGIEVKQMPCKHVYHDHCLLPWLELHNSCPVCRFELP- 254
            + +  L S  + C VC +EFE G E KQMPC H+YH  C++PWL  HNSCPVCR ELP 
Sbjct: 189 KIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 248

Query: 255 -TDDSDYENRTRGHRVQANESLEEESGSGNSGSSRERVARRFRVPLWWPF---GARNDGS 309
            +  S  +NRT   R   + S    S S  +G+ R      F     WPF   G+ +  +
Sbjct: 249 ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSF-----WPFRSSGSSSSST 305

The following BLAST results are available for this feature:

BLAST of Sed0007640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554317.1	9.4e-140	79.30	E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >...	[more]
KAG7032683.1	1.4e-138	78.34	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6601985.1	1.4e-138	78.34	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990139.1	2.3e-138	78.98	E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita maxima]	[more]
XP_022960730.1	2.3e-138	78.34	E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0007640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	2.4e-85	53.19	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	1.6e-81	51.54	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	3.5e-36	33.44	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	4.7e-33	33.78	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q6AVN2	1.4e-32	31.14	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]

BLAST of Sed0007640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JR94	1.1e-138	78.98	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487122 P...	[more]
A0A6J1H9Y0	1.1e-138	78.34	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423...	[more]
A0A6J1CK28	2.3e-136	75.47	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101187...	[more]
A0A6J1FJU6	1.6e-132	76.43	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684...	[more]
A0A6J1K1C4	5.9e-132	75.80	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 P...	[more]

BLAST of Sed0007640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	1.7e-86	53.19	RING/U-box superfamily protein	[more]
AT1G55530.1	2.8e-41	35.46	RING/U-box superfamily protein	[more]
AT5G56340.1	5.3e-40	46.60	RING/U-box superfamily protein	[more]
AT2G40830.2	2.5e-37	33.44	RING-H2 finger C1A	[more]
AT2G40830.1	2.5e-37	33.44	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 193..233 e-value: 2.0E-5 score: 34.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 191..234 e-value: 1.0E-12 score: 48.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 193..234 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 155..240 e-value: 1.9E-22 score: 80.7
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 14..46 e-value: 1.6E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..258
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 9..264
None	No IPR available	PANTHER	PTHR15710:SF91	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 9..264
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 192..234 e-value: 1.19899E-21 score: 83.9064
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 172..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007640.1	Sed0007640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity