Sed0007622 (gene) Chayote v1

Overview


Name	Sed0007622
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WD repeat-containing protein
Location	LG10: 8420527 .. 8423784 (-)
RNA-Seq Expression	Sed0007622
Synteny	Sed0007622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGTTAGTCTCTGATTCTAGCTCGTTAATCAATTTCATGGCATTGCATAATCAAACTTCAACCAGTAATTGATTCAGGGGCTCAATTGGAAAGAGAAGAGAAGGTTTCTTTGGAGCTAACCGAAGAAATCCTTCAGAGCATGGAAGTTGGCATGACCTTCAGAGACTATTTACTTCCATTCTATTCTTCATTTCATTACTGAATTTTATAAACATTTTATTATATGCTCCAATGTAGCTTAAGATTTTCTGACGGATATGGGCTTAGCGTTTGAATGTTTTGTGATTAGAAAATGGAGTAGCTGACGATTCTTCGGTACTGTACAACCTCGTTTTTTTGCTGCGTGAATTATCGGGAGTCGAGTTGGGTCGAGTCGCTTCCTGCTGCCGTTGTGGCAGTGGCAGAATTAGAACTCTCAGAATGGGGGTTTTGTTATGTTTTTCTTGGATAAGAAAGGGGGTTTTGTTATGTTAAAGATGTCTAATTTGGTGTTTTTATTTTTTATCTGTAACATTCTGGGCCAGTTTTGCGTGCAGCTCGACTGTTGTCGTGGGATATACCGTTTGATCTTACTACATTTTAATGTAAAAGAAACTCATTGAAAATTAATTCGTGGGTAGGTTGACACTCTTAGTTTGACCACTAGGTGACTCCATCCTGGTTTAATTTGGTGTTTTGGTCGTATCTATTTTTGAATTAACAATAATCAACAGTATATAGGTTCTAATCCTCACTCCCAAATATATATTTTTTTAATAAATAATAATTGGGAGTGAGGATTCGAAGATTTTGATTATCAGATCATACATCGAGCTCAACTGTTGTTTGTGGTGTTTTGTTCATACTATAGATTACTGTACTGTTTATTTTAATTTCGTTTTTCCCCTTTAATTATTACTCTCAGAGTGGTAGAATCAGCTCAATGGATTTTCATAGGACTTCAAGCTATCTGGTGACCGCTAGTGATGATGAGTCCATCCGAATTTATGATGTTGCCAGTGCATCGGATGCGTCTCTTTAATCACCTCAATTCAGATTGCTTTCAATAAATTTTTGTGTCTACTCTAGTTTCCACCATCTTATTGTTTAGGTATTTTTGTGGTTCCAGATGTTTGAAAACAATTAACAGCAAAAAGTATGGGGTTGATTTGGTTTGCTACACTTCTCACCCAACAACAGTGATATATTCTTCAAAAAATGGATGGGATGGTAATGTTTATCTTGGAACATTTCTGTTTTTTATATGAAAATTCACTCAACTATTTTATGTTATTTGTAAATCTATTTCCTTAGAGTCTTTGCGGCTTCTCTCATTGAACGACAATAAGTACCTGCGATACTTTAGAGGTCATCATGATAGGTTAATTCCTTGTTTTTTTTCTGTCATTATTACCAGAACTTTATATTTTGAATCTTCTTTTAATGGAATGATTTATGAATAAGAGGAGCAACTTTTCCTTTTCTCTTTCCAGAGTTGTATCACTCAGCTTATGTGCTCGCAAAGAATGTTTTATATCCGGATCGGACTGTTTTGCTTTGGGATCAAAGAGCAGAGAAATGCCAGGTGATGTAATTGGCATTAGAAGCTCAGTGTTACACCTGCCATCTCTACCCTTCTCTTCTCTCCTCCCTTGGATAATAAAGGGAATAAAACTCTCATTAACTCAAGTTGAGCATGTCTTGTATCTTAGGGTCTATTATGCGTACAAGGAAAGCCAGCTACAGCTTACGATGAACAGGGCATGGTCTTTGCTCGTTTGGAGGTTACATTAGGATGTTTGATGCTCGTAAATATGAGAAGGTTTTAATTTTTTTGATAATTTTGCACATATAAGTGGTGAACTTTAAAGTTAGCTCTGTAAATGCTTTTCCTAGATCTTCTGATGTGGTGAAAATTTTGAAAGCTATACGGACCTTTCAATATATTTTCTGTTGGGGAGGATGTATCTAATGTAAACGTCGTGAAGTTCAGCAATGACGGGAGACTCATGTTGTTAACAACTTCAGATGGGCATATTCATGTTCTTGATTCTTTCGAGGAACACTACTGAGTTCTTTTTCTTGTTTTTTTTTCTTTTCATGTTTAGGTGCTTATCATTATAACCTGTACGCTCAAATTGTCTTCTATGTGCTATTAATCTCACTGTTGATGTAGTTATCCACGTACAACGTAATTCGACGTTGGAGGCATCTTTTATTCTGGAGGGAATGTTTGTGATATCAGGTAATCAAGTCTTCTGTTTATGTTAGTCGGATGAAAGTCTAAAAGATGTATTCAGCTGTAATATAAACTTAATGTAGCTACTCAGGTTCCTCAATCTTTTAAAGATAGCTTTTAGACGTTTTCATGTTCTTGTGTGAATATACAAATCTACTCGAAAGTGTCATCCATCTTAAATTTGTTGTTCATATATCAAAATAAAAGATCAAACAGTGACCTATTCAGATTGAATGAAGGGTGAGGCATAAAATGAAATTCAAAGAACAATTTAGTACTCTGCCCCGGGCATTAGGTGAGTGAAGCTCTGATTTTTTGTCATCACAATACAAAGAACAGTTTAGTATTCTTTTCACATTTACGTTCTTAGCTTTTTAGTGTTTGTTCACGTGACAGGTTCGGGAGATGGCAGTGGTTATGTATGGAATGTAAGGAGTGGAAAAGTGGTAGTTGTGAAAGTTCCTGCTTTTTCCTTATTTATTTTTTCACGTTCAACTTTTCCTTACACAATTTACCATCACTCATTATTATTTGTTTATTATTATTTTTAATGTTTTTGTGGTCCAAATACATCATACTGCATGACTTCATATAACAAGTAAATGACGAAGGATTCTAAATGCCATAAGGTCCATAGCACAGTTCAGATCTTGTTATGCGTCACTATCTATCTTTGTCTAAGATAAATAGGTTGAACGTCCGGCGTTTTAGTTTTTATAAAAAATTGTAACTGCAAATTAAATGCAAGTTTGTCATCATGCCCCTAACTGCTGTATCAATTGGCAGAGAAAGGCGCACTAGCAGGCAGCAGTAAATTGAGGATTAGACACCCTTTAATCTATATATGCTTGAGAATTCAATTCTTAAATCCCTTTGCTATATTACTTCCAGGTTGCAAGCTGGATGAGTTCTGAAATGGAGCCTCCTGTCATAAAGTGGGCACCGGGAAGTCTAATGTTTGCAACTGGATCTTCTGAACTGTCATTTTGGATACCGGATTTGTCTAAGTTGGGAGCTTATGTAGACAGAAAGTAG

mRNA sequence

ATGGGAGGGGCTCAATTGGAAAGAGAAGAGAAGGTTTCTTTGGAGCTAACCGAAGAAATCCTTCAGAGCATGGAAAGTGGTAGAATCAGCTCAATGGATTTTCATAGGACTTCAAGCTATCTGGTGACCGCTAGTGATGATGAGTCCATCCGAATTTATGATGTTGCCAGTGCATCGGATGCATGTTTGAAAACAATTAACAGCAAAAAGTATGGGGTTGATTTGGTTTGCTACACTTCTCACCCAACAACAGTGATATATTCTTCAAAAAATGGATGGGATGAGTCTTTGCGGCTTCTCTCATTGAACGACAATAAGTACCTGCGATACTTTAGAGGTCATCATGATAGAGTTGTATCACTCAGCTTATGTGCTCGCAAAGAATGTTTTATATCCGGATCGGACTGTTTTGCTTTGGGATCAAAGAGCAGAGAAATGCCAGGTGATGGTCTATTATGCGTACAAGGAAAGCCAGCTACAGCTTACGATGAACAGGGCATGGTCTTTGCTCGTTTGGAGCTATACGGACCTTTCAATATATTTTCTGTTGGGGAGGATGTATCTAATGTAAACGTCGTGAAGTTCAGCAATGACGGGAGACTCATGTTGTTAACAACTTCAGATGGGCATATTCATTATTCTTTTCACATTTACGTTCTTAGCTTTTTAGTGTTTGTTCACGTGACAGGTTCGGGAGATGGCAGTGGTTATGTATGGAATGTAAGGAGTGGAAAAGTGGTTGCAAGCTGGATGAGTTCTGAAATGGAGCCTCCTGTCATAAAGTGGGCACCGGGAAGTCTAATGTTTGCAACTGGATCTTCTGAACTGTCATTTTGGATACCGGATTTGTCTAAGTTGGGAGCTTATGTAGACAGAAAGTAG

Coding sequence (CDS)

ATGGGAGGGGCTCAATTGGAAAGAGAAGAGAAGGTTTCTTTGGAGCTAACCGAAGAAATCCTTCAGAGCATGGAAAGTGGTAGAATCAGCTCAATGGATTTTCATAGGACTTCAAGCTATCTGGTGACCGCTAGTGATGATGAGTCCATCCGAATTTATGATGTTGCCAGTGCATCGGATGCATGTTTGAAAACAATTAACAGCAAAAAGTATGGGGTTGATTTGGTTTGCTACACTTCTCACCCAACAACAGTGATATATTCTTCAAAAAATGGATGGGATGAGTCTTTGCGGCTTCTCTCATTGAACGACAATAAGTACCTGCGATACTTTAGAGGTCATCATGATAGAGTTGTATCACTCAGCTTATGTGCTCGCAAAGAATGTTTTATATCCGGATCGGACTGTTTTGCTTTGGGATCAAAGAGCAGAGAAATGCCAGGTGATGGTCTATTATGCGTACAAGGAAAGCCAGCTACAGCTTACGATGAACAGGGCATGGTCTTTGCTCGTTTGGAGCTATACGGACCTTTCAATATATTTTCTGTTGGGGAGGATGTATCTAATGTAAACGTCGTGAAGTTCAGCAATGACGGGAGACTCATGTTGTTAACAACTTCAGATGGGCATATTCATTATTCTTTTCACATTTACGTTCTTAGCTTTTTAGTGTTTGTTCACGTGACAGGTTCGGGAGATGGCAGTGGTTATGTATGGAATGTAAGGAGTGGAAAAGTGGTTGCAAGCTGGATGAGTTCTGAAATGGAGCCTCCTGTCATAAAGTGGGCACCGGGAAGTCTAATGTTTGCAACTGGATCTTCTGAACTGTCATTTTGGATACCGGATTTGTCTAAGTTGGGAGCTTATGTAGACAGAAAGTAG

Protein sequence

MGGAQLEREEKVSLELTEEILQSMESGRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSLCARKECFISGSDCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVFARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHYSFHIYVLSFLVFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

Homology

[Close]

BLAST of Sed0007622 vs. NCBI nr
Match: XP_008440813.1 (PREDICTED: WD repeat-containing protein 82-B [Cucumis melo] >KAA0025679.1 WD repeat-containing protein 82-B [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 7.1e-121
Identity = 248/335 (74.03%), Postives = 262/335 (78.21%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. NCBI nr
Match: XP_022133346.1 (protein ANTHESIS POMOTING FACTOR 1 isoform X1 [Momordica charantia])

HSP 1 Score: 443.4 bits (1139), Expect = 1.6e-120
Identity = 248/335 (74.03%), Postives = 261/335 (77.91%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYF+
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFK 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGLVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ NVVKFSNDGRLMLLTT DGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMSSEMEPP
Sbjct: 241 TLLSTYNVKPISRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSSEMEPP 300

[Close]

BLAST of Sed0007622 vs. NCBI nr
Match: TYK12554.1 (WD repeat-containing protein 82-B [Cucumis melo var. makuwa])

HSP 1 Score: 442.2 bits (1136), Expect = 3.5e-120
Identity = 249/336 (74.11%), Postives = 263/336 (78.27%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGK-VVASWMSSEMEP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VVASWMS+EMEP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVVASWMSTEMEP 300

[Close]

BLAST of Sed0007622 vs. NCBI nr
Match: XP_038880888.1 (protein ANTHESIS POMOTING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 442.2 bits (1136), Expect = 3.5e-120
Identity = 246/335 (73.43%), Postives = 261/335 (77.91%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGA  EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGASSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFSI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGED+S+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDISDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISSNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. NCBI nr
Match: XP_004134865.1 (protein ANTHESIS POMOTING FACTOR 1 [Cucumis sativus] >KGN48909.1 hypothetical protein Csa_003122 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 7.8e-120
Identity = 245/335 (73.13%), Postives = 262/335 (78.21%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGG+Q EREEKVSLELTEEILQSME        +GRISSMDFH+TSSYLVTASDDESIR+
Sbjct: 1   MGGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGED+S+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot
Match: Q9LYK6 (Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=APRF1 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-48
Identity = 119/300 (39.67%), Postives = 170/300 (56.67%), Query Frame = 0


Query: 27  GRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKTINSKKYGVDLVCYTSHPTTVI 86
           G+I S+ FHRT   LVT+S+D+S+R++D+A+A    LK    KK+G D VC+T HP+++I
Sbjct: 25  GKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQ--LKITYHKKHGTDRVCFTHHPSSLI 84

Query: 87  YSSKNGWD---ESLRLLSLNDNKYLRYFRGHHDRVVSLSLCARKECFISGS-DCFALGSK 146
            SS+   +   ESLR LS+ DN+ LRYF+GH DRVVSL +    + F+SGS D       
Sbjct: 85  CSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 144

Query: 147 SREMPGDGLLCVQGKPATAYDEQGMVFA------RLELY-------GPFNIFSVGEDVSN 206
            R     G+L ++G+PA AYD+QG+VFA       ++L+       GPF+ F VG D + 
Sbjct: 145 LRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAE 204

Query: 207 VNVVKFSNDGRLMLLTTSDGHIHY----------SFHI-----------------YVLSF 266
           VN +KFSNDG+ MLLTT++ +I+            F +                 YVLS 
Sbjct: 205 VNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLS- 264

Query: 267 LVFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWAPGSLMFATGSSELSFWIPD 283
                  GSGDG+ + WN+ +   VA W ++      +KWAP   MF   S+ L+FWIP+
Sbjct: 265 -------GSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAASTVLTFWIPN 314

[Close]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot
Match: Q58E77 (WD repeat-containing protein 82-B OS=Xenopus laevis OX=8355 GN=wdr82-b PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-37
Identity = 110/314 (35.03%), Postives = 165/314 (52.55%), Query Frame = 0


Query: 14  LELTEEILQSM--------ESGRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKT 73
           ++LT+ +L+S          S +I+  DF  T   ++++SDD+SI +YD         +T
Sbjct: 1   MKLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPK--RT 60

Query: 74  INSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSLCA 133
           + SKKYGVDL+ YT    TV+YSS N  D+++R LSL+DNKY+RYF GH  RVVSLS+  
Sbjct: 61  LYSKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVSLSMSP 120

Query: 134 RKECFISGSDCFALGSKSREMPG-DGLLCVQGKPATAYDEQGMVFA------RLELY--- 193
             + FISGS    +       P   GL+ +QGKP  ++D +G++FA       ++LY   
Sbjct: 121 VDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLR 180

Query: 194 ----GPFNIFSVGED-VSNVNVVKFSNDGRLMLLTTSDGHIH----------YSFHIYVL 253
               GPF  F +  D       +KFSNDG+L+LL+T+ G +           ++F  Y  
Sbjct: 181 SFDKGPFATFKMQYDRTCEWTALKFSNDGKLILLSTNGGFLRLVDAFKGAVMHTFGGYNN 240

Query: 254 SFLVFVHVT----------GSGDGSGYVWNVRSGKVVASWMSSEMEP-PVIKWAPGSLMF 284
           S  V +  +          GS DG  +VWN  SG  VA        P   +++ P  + F
Sbjct: 241 SKAVTLEASFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTF 300

[Close]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot
Match: Q6GL39 (WD repeat-containing protein 82 OS=Xenopus tropicalis OX=8364 GN=wdr82 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36
Identity = 108/314 (34.39%), Postives = 164/314 (52.23%), Query Frame = 0


Query: 14  LELTEEILQSM--------ESGRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKT 73
           ++LT+ +L+S          S +I+  DF  T   ++++SDD+SI +YD         +T
Sbjct: 1   MKLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPK--RT 60

Query: 74  INSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSLCA 133
           + SKKYGVDL+ YT    TV+YSS N  D+++R LSL+DNKY+RYF GH  RVV+LS+  
Sbjct: 61  LYSKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSP 120

Query: 134 RKECFISGSDCFALGSKSREMPG-DGLLCVQGKPATAYDEQGMVFA------RLELY--- 193
             + FISGS    +       P   GL+ +QGKP  ++D +G++FA       ++LY   
Sbjct: 121 VDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLR 180

Query: 194 ----GPFNIFSVGED-VSNVNVVKFSNDGRLMLLTTSDGHIH----------YSFHIYVL 253
               GPF  F +  D       +KFSNDG+L+L++T+ G +           ++F  Y  
Sbjct: 181 SFDKGPFATFKMQYDRTCEWTALKFSNDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNN 240

Query: 254 SFLVFVHVT----------GSGDGSGYVWNVRSGKVVASWMSSEMEP-PVIKWAPGSLMF 284
           S  V +  T          GS DG  +VWN  SG  VA        P   +++ P  + F
Sbjct: 241 SKAVTLEATFTPDSQFIMIGSEDGKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTF 300

[Close]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot
Match: Q6NV31 (WD repeat-containing protein 82 OS=Danio rerio OX=7955 GN=wdr82 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.3e-36
Identity = 108/314 (34.39%), Postives = 165/314 (52.55%), Query Frame = 0


Query: 14  LELTEEILQSM--------ESGRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKT 73
           ++LT+ +L+S          S +I+  DF      ++++SDD+SI +YD         +T
Sbjct: 1   MKLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPK--RT 60

Query: 74  INSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSLCA 133
           + SKKYGVDL+ YT    TV+YSS N  D+++R LSL+DNKY+RYF GH+ RVV+LS+  
Sbjct: 61  LYSKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSP 120

Query: 134 RKECFISGSDCFALGSKSREMPG-DGLLCVQGKPATAYDEQGMVFA------RLELY--- 193
             + FISGS    +       P   GL+ +QGKP  ++D +G++FA       ++LY   
Sbjct: 121 VDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLR 180

Query: 194 ----GPFNIFSVG-EDVSNVNVVKFSNDGRLMLLTTSDGHIH----------YSFHIYVL 253
               GPF  F +  E       +KFSNDG+L+L++T+ G +           +SF  Y  
Sbjct: 181 SFDKGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNN 240

Query: 254 SFLVFVHVT----------GSGDGSGYVWNVRSGKVVASWMSSEMEP-PVIKWAPGSLMF 284
           S  V +  +          GS DG  +VWN  SG  VA        P   +++ P  + F
Sbjct: 241 SKGVILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTF 300

[Close]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot
Match: Q5ZMV7 (WD repeat-containing protein 82 OS=Gallus gallus OX=9031 GN=WDR82 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 108/314 (34.39%), Postives = 164/314 (52.23%), Query Frame = 0


Query: 14  LELTEEILQSM--------ESGRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKT 73
           ++LT+ +L+S          S +I+  DF      ++++SDD+SI +YD         +T
Sbjct: 1   MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPK--RT 60

Query: 74  INSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSLCA 133
           + SKKYGVDL+ YT    TV+YSS N  D+++R LSL+DNKY+RYF GH  RVV+LS+  
Sbjct: 61  LYSKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSP 120

Query: 134 RKECFISGSDCFALGSKSREMPG-DGLLCVQGKPATAYDEQGMVFA------RLELY--- 193
             + FISGS    +       P   GL+ +QGKP  ++D +G++FA       ++LY   
Sbjct: 121 VDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLR 180

Query: 194 ----GPFNIFSVGED-VSNVNVVKFSNDGRLMLLTTSDGHIH----------YSFHIYVL 253
               GPF  F +  D       +KFSNDG+L+L++T+ G I           ++F  Y  
Sbjct: 181 SFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNN 240

Query: 254 SFLVFVHVT----------GSGDGSGYVWNVRSGKVVASWMSSEMEP-PVIKWAPGSLMF 284
           S  V +  +          GS DG  +VWN  SG  VA        P   +++ P  + F
Sbjct: 241 SKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTF 300

[Close]

BLAST of Sed0007622 vs. ExPASy TrEMBL
Match: A0A5A7SK88 (WD repeat-containing protein 82-B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G001730 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121
Identity = 248/335 (74.03%), Postives = 262/335 (78.21%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. ExPASy TrEMBL
Match: A0A1S3B2M1 (WD repeat-containing protein 82-B OS=Cucumis melo OX=3656 GN=LOC103485121 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121
Identity = 248/335 (74.03%), Postives = 262/335 (78.21%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. ExPASy TrEMBL
Match: A0A6J1BUT9 (protein ANTHESIS POMOTING FACTOR 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005947 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 7.6e-121
Identity = 248/335 (74.03%), Postives = 261/335 (77.91%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYF+
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFK 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGLVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ NVVKFSNDGRLMLLTT DGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMSSEMEPP
Sbjct: 241 TLLSTYNVKPISRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSSEMEPP 300

[Close]

BLAST of Sed0007622 vs. ExPASy TrEMBL
Match: A0A5D3CN98 (WD repeat-containing protein 82-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001360 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 249/336 (74.11%), Postives = 263/336 (78.27%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGGAQ EREEKVSLELTEEILQSME        +GRISSMDFHRTSSYLVTASDDESIR+
Sbjct: 1   MGGAQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGEDVS+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDVSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGK-VVASWMSSEMEP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VVASWMS+EMEP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVVASWMSTEMEP 300

[Close]

BLAST of Sed0007622 vs. ExPASy TrEMBL
Match: A0A0A0KJC5 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505870 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.8e-120
Identity = 245/335 (73.13%), Postives = 262/335 (78.21%), Query Frame = 0


Query: 1   MGGAQLEREEKVSLELTEEILQSME--------SGRISSMDFHRTSSYLVTASDDESIRI 60
           MGG+Q EREEKVSLELTEEILQSME        +GRISSMDFH+TSSYLVTASDDESIR+
Sbjct: 1   MGGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRL 60

Query: 61  YDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120
           YDVASA+  CLKTINSKKYGVDLVC+TSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR
Sbjct: 61  YDVASAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFR 120

Query: 121 GHHDRVVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-- 180
           GHHDRVVSLSLCARKECFISGS D   L    R     GLL VQGKPATAYDEQG+VF  
Sbjct: 121 GHHDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAI 180

Query: 181 ----------ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHI 240
                     AR    GPF+IFSVGED+S+ N+VKFSNDGRLMLLTTSDGHIH   SF  
Sbjct: 181 AFGGYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRG 240

Query: 241 YVLSFL-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPP 294
            +LS                     +FV ++GSGDGS Y W+VRSGK VASWMS+EMEPP
Sbjct: 241 TLLSTYNVKPISRNLTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSTEMEPP 300

[Close]

BLAST of Sed0007622 vs. TAIR 10
Match: AT5G66240.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 8.7e-101
Identity = 207/330 (62.73%), Postives = 236/330 (71.52%), Query Frame = 0


Query: 6   LEREEKVSLELTEEILQSMESG--------RISSMDFHRTSSYLVTASDDESIRIYDVAS 65
           +ERE++VSLEL+EEI+QSME G        RISS+DFH+TS+ +VTASDD+SIR+YDVAS
Sbjct: 2   VEREDRVSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVAS 61

Query: 66  ASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDR 125
           A+  CLKTINSKKYGVDLVC+TSHPTTVIYSS+NGWD+SLRLLSL+DNKYLRYF+GHHDR
Sbjct: 62  AT--CLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDR 121

Query: 126 VVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF------- 185
           VVSLSLC+  ECFISGS D   L    R     GLL VQG+PA AYD+QG++F       
Sbjct: 122 VVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGY 181

Query: 186 -----ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHIYVLSF 245
                AR+   GPF IFSVG D+S  NVVKFSNDGRLMLLTT DG IH   SF   +LS 
Sbjct: 182 IRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLST 241

Query: 246 L-------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWA 294
                               +FV V+GSGDGS + W VRSGK V SWM    EPPVIKW 
Sbjct: 242 FSVKPVAGESTLDAAFSPEGMFV-VSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWG 301

[Close]

BLAST of Sed0007622 vs. TAIR 10
Match: AT5G66240.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-100
Identity = 207/329 (62.92%), Postives = 235/329 (71.43%), Query Frame = 0


Query: 7   EREEKVSLELTEEILQSMESG--------RISSMDFHRTSSYLVTASDDESIRIYDVASA 66
           ERE++VSLEL+EEI+QSME G        RISS+DFH+TS+ +VTASDD+SIR+YDVASA
Sbjct: 6   EREDRVSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASA 65

Query: 67  SDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDRV 126
           +  CLKTINSKKYGVDLVC+TSHPTTVIYSS+NGWD+SLRLLSL+DNKYLRYF+GHHDRV
Sbjct: 66  T--CLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRV 125

Query: 127 VSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF-------- 186
           VSLSLC+  ECFISGS D   L    R     GLL VQG+PA AYD+QG++F        
Sbjct: 126 VSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYI 185

Query: 187 ----ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHIYVLSFL 246
               AR+   GPF IFSVG D+S  NVVKFSNDGRLMLLTT DG IH   SF   +LS  
Sbjct: 186 RMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTF 245

Query: 247 -------------------VFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWAP 294
                              +FV V+GSGDGS + W VRSGK V SWM    EPPVIKW P
Sbjct: 246 SVKPVAGESTLDAAFSPEGMFV-VSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGP 305

[Close]

BLAST of Sed0007622 vs. TAIR 10
Match: AT5G66240.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 362.8 bits (930), Expect = 2.5e-100
Identity = 205/327 (62.69%), Postives = 232/327 (70.95%), Query Frame = 0


Query: 6   LEREEKVSLELTEEILQSMESG--------RISSMDFHRTSSYLVTASDDESIRIYDVAS 65
           +ERE++VSLEL+EEI+QSME G        RISS+DFH+TS+ +VTASDD+SIR+YDVAS
Sbjct: 2   VEREDRVSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVAS 61

Query: 66  ASDACLKTINSKKYGVDLVCYTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHHDR 125
           A+  CLKTINSKKYGVDLVC+TSHPTTVIYSS+NGWD+SLRLLSL+DNKYLRYF+GHHDR
Sbjct: 62  AT--CLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDR 121

Query: 126 VVSLSLCARKECFISGS-DCFALGSKSREMPGDGLLCVQGKPATAYDEQGMVF------- 185
           VVSLSLC+  ECFISGS D   L    R     GLL VQG+PA AYD+QG++F       
Sbjct: 122 VVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGY 181

Query: 186 -----ARLELYGPFNIFSVGEDVSNVNVVKFSNDGRLMLLTTSDGHIHY--SFHIYVLSF 245
                AR+   GPF IFSVG D+S  NVVKFSNDGRLMLLTT DG IH   SF   +LS 
Sbjct: 182 IRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLST 241

Query: 246 LVFVHVTG----------------SGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWAPGS 294
                V G                SGDGS + W VRSGK V SWM    EPPVIKW PGS
Sbjct: 242 FSVKPVAGESTLDAAFSPEGMFVVSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGS 301

[Close]

BLAST of Sed0007622 vs. TAIR 10
Match: AT5G14530.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 193.0 bits (489), Expect = 3.4e-49
Identity = 119/300 (39.67%), Postives = 170/300 (56.67%), Query Frame = 0


Query: 27  GRISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKTINSKKYGVDLVCYTSHPTTVI 86
           G+I S+ FHRT   LVT+S+D+S+R++D+A+A    LK    KK+G D VC+T HP+++I
Sbjct: 25  GKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQ--LKITYHKKHGTDRVCFTHHPSSLI 84

Query: 87  YSSKNGWD---ESLRLLSLNDNKYLRYFRGHHDRVVSLSLCARKECFISGS-DCFALGSK 146
            SS+   +   ESLR LS+ DN+ LRYF+GH DRVVSL +    + F+SGS D       
Sbjct: 85  CSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 144

Query: 147 SREMPGDGLLCVQGKPATAYDEQGMVFA------RLELY-------GPFNIFSVGEDVSN 206
            R     G+L ++G+PA AYD+QG+VFA       ++L+       GPF+ F VG D + 
Sbjct: 145 LRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAE 204

Query: 207 VNVVKFSNDGRLMLLTTSDGHIHY----------SFHI-----------------YVLSF 266
           VN +KFSNDG+ MLLTT++ +I+            F +                 YVLS 
Sbjct: 205 VNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLS- 264

Query: 267 LVFVHVTGSGDGSGYVWNVRSGKVVASWMSSEMEPPVIKWAPGSLMFATGSSELSFWIPD 283
                  GSGDG+ + WN+ +   VA W ++      +KWAP   MF   S+ L+FWIP+
Sbjct: 265 -------GSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAASTVLTFWIPN 314

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BLAST of Sed0007622 vs. TAIR 10
Match: AT5G13480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 32/107 (29.91%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 29  ISSMDFHRTSSYLVTASDDESIRIYDVASASDACLKTINSKKYGVDLVCYTSHPTTVIYS 88
           + S+D+H T S LV+   D+ ++++D  S  + C  +++  K  V  V +  +   ++ +
Sbjct: 252 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELC--SLHGHKNIVLSVKWNQNGNWLLTA 311

Query: 89  SKNGWDESLRLLSLNDNKYLRYFRGHHDRVVSLSL-CARKECFISGS 135
           SK   D+ ++L  +   K L+ FRGH   V SL+     +E F+SGS
Sbjct: 312 SK---DQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGS 353

The following BLAST results are available for this feature:

BLAST of Sed0007622 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440813.1	7.1e-121	74.03	PREDICTED: WD repeat-containing protein 82-B [Cucumis melo] >KAA0025679.1 WD rep...	[more]
XP_022133346.1	1.6e-120	74.03	protein ANTHESIS POMOTING FACTOR 1 isoform X1 [Momordica charantia]	[more]
TYK12554.1	3.5e-120	74.11	WD repeat-containing protein 82-B [Cucumis melo var. makuwa]	[more]
XP_038880888.1	3.5e-120	73.43	protein ANTHESIS POMOTING FACTOR 1 [Benincasa hispida]	[more]
XP_004134865.1	7.8e-120	73.13	protein ANTHESIS POMOTING FACTOR 1 [Cucumis sativus] >KGN48909.1 hypothetical pr...	[more]

BLAST of Sed0007622 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYK6	4.9e-48	39.67	Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=APRF1 PE=2...	[more]
Q58E77	3.0e-37	35.03	WD repeat-containing protein 82-B OS=Xenopus laevis OX=8355 GN=wdr82-b PE=2 SV=1	[more]
Q6GL39	1.1e-36	34.39	WD repeat-containing protein 82 OS=Xenopus tropicalis OX=8364 GN=wdr82 PE=2 SV=1	[more]
Q6NV31	4.3e-36	34.39	WD repeat-containing protein 82 OS=Danio rerio OX=7955 GN=wdr82 PE=2 SV=1	[more]
Q5ZMV7	1.2e-35	34.39	WD repeat-containing protein 82 OS=Gallus gallus OX=9031 GN=WDR82 PE=2 SV=1	[more]

BLAST of Sed0007622 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SK88	3.4e-121	74.03	WD repeat-containing protein 82-B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3B2M1	3.4e-121	74.03	WD repeat-containing protein 82-B OS=Cucumis melo OX=3656 GN=LOC103485121 PE=4 S...	[more]
A0A6J1BUT9	7.6e-121	74.03	protein ANTHESIS POMOTING FACTOR 1 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3CN98	1.7e-120	74.11	WD repeat-containing protein 82-B OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KJC5	3.8e-120	73.13	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]

BLAST of Sed0007622 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66240.1	8.7e-101	62.73	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G66240.2	1.1e-100	62.92	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G66240.3	2.5e-100	62.69	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G14530.1	3.4e-49	39.67	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G13480.1	1.1e-05	29.91	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 104..142 e-value: 73.0 score: 5.2 coord: 17..54 e-value: 3.4E-5 score: 33.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 29..54 e-value: 0.0076 score: 17.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 22..57 score: 9.840087
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..139 e-value: 3.6E-18 score: 67.4
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 181..287 e-value: 2.4E-7 score: 32.0
None	No IPR available	PANTHER	PTHR19861	WD40 REPEAT PROTEIN SWD2	coord: 228..292
None	No IPR available	PANTHER	PTHR19861:SF3	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 228..292
None	No IPR available	PANTHER	PTHR19861:SF3	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 1..213
None	No IPR available	PANTHER	PTHR19861	WD40 REPEAT PROTEIN SWD2	coord: 1..213
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 26..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007622.1	Sed0007622.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080182	histone H3-K4 trimethylation
cellular_component	GO:0048188	Set1C/COMPASS complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding