Sed0007603 (gene) Chayote v1

Overview


Name	Sed0007603
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LEA_2 domain-containing protein
Location	LG03: 12431836 .. 12432743 (+)
RNA-Seq Expression	Sed0007603
Synteny	Sed0007603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATAAATTAATCCACTCTCATCTCCATCCTTTGGTATTTTTCAAAAGCAAATCCTCTCCATCAAAGTTGGCTTCTTTACATTAGTACAGATCTATCCATCCTCGAGTATGGCCGGTCCTCTGCAGCGACCCCCACGAACCGGTCACCCGAGCATATTACACAGGGTCGCAATGGTCATAGTAGCATTGATCGTACTCGTTGGCATCGCGGTGTTCATTATTTGGTTGACAATTAGGCCGAAACGACTAAGCTACACGGTGGAAGGTGCTTCGGTCCAGAACCTTGGCTTGAGCGACACTCAACTCAATGCCTCATTTAACTTTGGAGTAAGAGCTTATAATCCCAATAGTCGAGTCTCAATTTACTACGATTATGTCACTGTTACGGTCGGCTTTGGCGATCAAGACTTGGCGTTCGGCAAGATCAAGCCCTTGTACCAACCTCCCCAAGACGTGACATGGTTGAACATGAACCTTGATGCTCAAAATACTCCGTTACACGACTCCGTGTCAAAGGATCTACTGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGAGAATTAGGTTTAAGGTCGGGATTTGGAAGTCGGGGCATCGCACTCTTCGGATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGGCAAGGATTTCAAGAAGACTAATTGCATTGCAGAAGTCTAAAGCTGAGAATTAGTTTTGAAAAAGAAAAAATAAATCTAAAGCTCAGAATTTGGTTTTGCTTTCATAAAAGGGTGTTTTTCTTATATTACTTCCTCAGGTTTCATTAATGGTGTAATGTTGGGTTAGTTTTTCAAGTGAGGAATTTGAGAGCTCTGCTTGTTGTTCTTATGTTGGGTTTGTGTTTATGTATATGCTCTTTTTGATC

mRNA sequence

CTTATAAATTAATCCACTCTCATCTCCATCCTTTGGTATTTTTCAAAAGCAAATCCTCTCCATCAAAGTTGGCTTCTTTACATTAGTACAGATCTATCCATCCTCGAGTATGGCCGGTCCTCTGCAGCGACCCCCACGAACCGGTCACCCGAGCATATTACACAGGGTCGCAATGGTCATAGTAGCATTGATCGTACTCGTTGGCATCGCGGTGTTCATTATTTGGTTGACAATTAGGCCGAAACGACTAAGCTACACGGTGGAAGGTGCTTCGGTCCAGAACCTTGGCTTGAGCGACACTCAACTCAATGCCTCATTTAACTTTGGAGTAAGAGCTTATAATCCCAATAGTCGAGTCTCAATTTACTACGATTATGTCACTGTTACGGTCGGCTTTGGCGATCAAGACTTGGCGTTCGGCAAGATCAAGCCCTTGTACCAACCTCCCCAAGACGTGACATGGTTGAACATGAACCTTGATGCTCAAAATACTCCGTTACACGACTCCGTGTCAAAGGATCTACTGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGAGAATTAGGTTTAAGGTCGGGATTTGGAAGTCGGGGCATCGCACTCTTCGGATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGGCAAGGATTTCAAGAAGACTAATTGCATTGCAGAAGTCTAAAGCTGAGAATTAGTTTTGAAAAAGAAAAAATAAATCTAAAGCTCAGAATTTGGTTTTGCTTTCATAAAAGGGTGTTTTTCTTATATTACTTCCTCAGGTTTCATTAATGGTGTAATGTTGGGTTAGTTTTTCAAGTGAGGAATTTGAGAGCTCTGCTTGTTGTTCTTATGTTGGGTTTGTGTTTATGTATATGCTCTTTTTGATC

Coding sequence (CDS)

ATGGCCGGTCCTCTGCAGCGACCCCCACGAACCGGTCACCCGAGCATATTACACAGGGTCGCAATGGTCATAGTAGCATTGATCGTACTCGTTGGCATCGCGGTGTTCATTATTTGGTTGACAATTAGGCCGAAACGACTAAGCTACACGGTGGAAGGTGCTTCGGTCCAGAACCTTGGCTTGAGCGACACTCAACTCAATGCCTCATTTAACTTTGGAGTAAGAGCTTATAATCCCAATAGTCGAGTCTCAATTTACTACGATTATGTCACTGTTACGGTCGGCTTTGGCGATCAAGACTTGGCGTTCGGCAAGATCAAGCCCTTGTACCAACCTCCCCAAGACGTGACATGGTTGAACATGAACCTTGATGCTCAAAATACTCCGTTACACGACTCCGTGTCAAAGGATCTACTGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGAGAATTAGGTTTAAGGTCGGGATTTGGAAGTCGGGGCATCGCACTCTTCGGATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGGCAAGGATTTCAAGAAGACTAATTGCATTGCAGAAGTCTAA

Protein sequence

MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGLSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLNMNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIVYLSKGKDFKKTNCIAEV

Homology

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BLAST of Sed0007603 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo] >KAG6586016.1 hypothetical protein SDJN03_18749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-80
Identity = 151/197 (76.65%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q   R   P+IL  V +V+VALIVLVG+ V IIWLT+RPKRLSYTVE A+V N  
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +S TQLNASFNFGV+AYNPN  VS+YYD+VTVTVGFGDQDLAFG IKP YQP +DVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           M+L+A+N  LHDSVSKDL LEKAAGEMDLDLWIKARIRFKVG+WKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K+FK+T C  EV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

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BLAST of Sed0007603 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-79
Identity = 149/197 (75.63%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q  PR   P+IL  V +V+VALIVLVG+ V IIWLT+RPKRL YTVE A+V N  
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +S TQLNASFNFGV+AYNPN  VS+YYD+VTVTVGFGDQDLAFG IKP YQP +DVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           M+L+A+N  LHDSVSKDL LEKAAGEMDLDLWIKARIR+KVG+WK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K+FK+T C  EV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

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BLAST of Sed0007603 vs. NCBI nr
Match: KAG7020792.1 (hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.7 bits (779), Expect = 5.9e-79
Identity = 149/197 (75.63%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q   R    +IL  V +V+VALIVLVG+ V IIWLT+RPKRLSYTVE A+V N  
Sbjct: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +S TQLNASFNFGV+AYNPN  VS+YYD+VTVTVGFGDQDLAFG IKP YQP +DVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           M+L+A+N  LHDSVSKDL LEKAAGEMDLDLWIKARIRFKVG+WKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K+FK+T C  E+
Sbjct: 181 YLSKDKEFKRTACFTEI 197

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BLAST of Sed0007603 vs. NCBI nr
Match: XP_038894942.1 (uncharacterized protein At1g08160-like [Benincasa hispida])

HSP 1 Score: 302.0 bits (772), Expect = 3.8e-78
Identity = 149/197 (75.63%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q PPR G   IL  V M IVALI+LVG+AV IIWLTIRPKRLSYTVE ASV N  
Sbjct: 1   MAGPPQPPPRAGPSRILRFVLMFIVALIILVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           ++ TQLNASF+FGVRAYNPN RV+IYYD +T TVGFGDQDLAFG + P YQP +D  WLN
Sbjct: 61  MTSTQLNASFSFGVRAYNPNKRVAIYYDSITATVGFGDQDLAFGVLSPFYQPHKDERWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           ++LDAQN  LHDSVSKDL LE+AAGEMDLDLWIKARIRFKVG+WKS HRTLRIRCSPVIV
Sbjct: 121 IHLDAQNFLLHDSVSKDLALERAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK + FKKT C  EV
Sbjct: 181 YLSKSQTFKKTTCFTEV 197

[Close]

BLAST of Sed0007603 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 uncharacterized protein E6C27_scaffold43053G00810 [Cucumis melo var. makuwa] >TYK20878.1 uncharacterized protein E5676_scaffold284G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 6.1e-76
Identity = 144/197 (73.10%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q P R G   IL  V + +VALI+LVG+AV IIWLTIRPKRLSYTVE A V N  
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +++TQLNASF+FGVRAYNPN RVS+YYD +T TVGFGDQDLAFG + P YQP +D  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           ++L+AQN  LHDSVSKDL LE++AGEMDLDLWIKARIRFKVG+WKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K FKKT C  EV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27
Identity = 67/190 (35.26%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 8   PPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQN--LGLSDTQ 67
           P R  +P +   VA+V++ L  LVG+A+ I +LT+RPKRL YTVE ASVQ   +G +D  
Sbjct: 30  PGRRMNPVLCIIVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH 89

Query: 68  LNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLNMNLDA 127
           +NA F++ +++YNP   VS+ Y  + ++    +Q +A   I P  Q P++ T +   L +
Sbjct: 90  INAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVS 149

Query: 128 QNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIVYLSKG 187
            N  L    ++DL  EK+ G ++++++I AR+ +K  I++S  RTL+  C+PV++ ++  
Sbjct: 150 HNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSS 209

Query: 188 K--DFKKTNC 194
               F++  C
Sbjct: 210 SLDGFQRVLC 217

[Close]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-14
Identity = 57/186 (30.65%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 16  ILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGLSDT---QLNASFNF 75
           IL  +  +++ + VL+GIA  IIWL  RP  + + V  A +    L  T   + N   NF
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVRAYNPNSRVSIYYDYVTVTVGFGDQDLAF-GKIKPLYQPPQDVTWLNMNLDAQNTPLH 135
            +R  NPN R+ +YYD + V   +GDQ       I   YQ  ++ T +   L  Q   L 
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLL 163

Query: 136 DSVSKDLLLEKAAGEM-DLDLWIKARIRFKVGIWKSGHRTLRIRCS---PVIVYLSKGKD 194
           D   +  L E    ++  +D  ++ +IRFK G+ KS     +I+C    P+    + G  
Sbjct: 164 DGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 223

[Close]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 48/185 (25.95%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 16  ILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGLS-DTQLNASFNFGV 75
           IL  +  +++A+ V++G+A  I+WL  RP  + + V  A++       +  L+ S +   
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNF 110

Query: 76  RAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLNMNLDAQN-TPLHDS 135
              NPN RV +YYD  +V+  +GDQ      +   YQ  ++ T +   ++ QN   L D 
Sbjct: 111 TIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDG 170

Query: 136 VSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIVYLSK-----GKDF 194
              DL  ++ +G   ++  ++  +RFK    KS     +I+C  + + L       G  F
Sbjct: 171 ARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKF 230

[Close]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-13
Identity = 54/206 (26.21%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 3   GPLQRPP------RTGHP-----SILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTV 62
           GP   PP      R GH       +L     VI++LIV++G+A  I WL +RP+ + + V
Sbjct: 13  GPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHV 72

Query: 63  EGASVQNLGLS--DTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPL 122
             AS+     +  D  L  +    V   NPN R+ +YYD +     +  +  +   + P 
Sbjct: 73  TDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPF 132

Query: 123 YQPPQDVTWLNMNLDAQNTPLHDS-VSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGH 182
           YQ  ++ T L      QN  + ++  S+ L  E+ +G  ++++  + R+RFK+G  K   
Sbjct: 133 YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRR 192

Query: 183 RTLRIRCSPVIVYLSKGKDFKKTNCI 195
              ++ C  + + LS       T+ +
Sbjct: 193 IKPKVDCDDLRLPLSTSNGTTTTSTV 218

[Close]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-10
Identity = 44/163 (26.99%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 19  RVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGLSDTQ-LNASFNFGVRAY 78
           R+  VI+  I++V I +F++W+ ++P +  + ++ A+V    LS    L ++F   + + 
Sbjct: 20  RICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASR 79

Query: 79  NPNSRVSIYYDYVTVTVGFGDQDLAF-GKIKPLYQPPQDVTWLNMNLDAQNTPLHDSVSK 138
           N NSR+ IYYD + V   + +Q +     I P YQ  ++    +  +   + P+    + 
Sbjct: 80  NRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAV 139

Query: 139 DLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVI 180
            L  E+  G + L +    R+R+KVG   +G   L +RC   I
Sbjct: 140 ALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

[Close]

BLAST of Sed0007603 vs. ExPASy TrEMBL
Match: A0A6J1FH28 (uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.6e-80
Identity = 151/197 (76.65%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q   R   P+IL  V +V+VALIVLVG+ V IIWLT+RPKRLSYTVE A+V N  
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +S TQLNASFNFGV+AYNPN  VS+YYD+VTVTVGFGDQDLAFG IKP YQP +DVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           M+L+A+N  LHDSVSKDL LEKAAGEMDLDLWIKARIRFKVG+WKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K+FK+T C  EV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Sed0007603 vs. ExPASy TrEMBL
Match: A0A6J1I194 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 149/197 (75.63%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q  PR   P+IL  V +V+VALIVLVG+ V IIWLT+RPKRL YTVE A+V N  
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +S TQLNASFNFGV+AYNPN  VS+YYD+VTVTVGFGDQDLAFG IKP YQP +DVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           M+L+A+N  LHDSVSKDL LEKAAGEMDLDLWIKARIR+KVG+WK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K+FK+T C  EV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Sed0007603 vs. ExPASy TrEMBL
Match: A0A5D3DBK2 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00070 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 144/197 (73.10%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q P R G   IL  V + +VALI+LVG+AV IIWLTIRPKRLSYTVE A V N  
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +++TQLNASF+FGVRAYNPN RVS+YYD +T TVGFGDQDLAFG + P YQP +D  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           ++L+AQN  LHDSVSKDL LE++AGEMDLDLWIKARIRFKVG+WKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K FKKT C  EV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0007603 vs. ExPASy TrEMBL
Match: A0A1S3CLP6 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 144/197 (73.10%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q P R G   IL  V + +VALI+LVG+AV IIWLTIRPKRLSYTVE A V N  
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           +++TQLNASF+FGVRAYNPN RVS+YYD +T TVGFGDQDLAFG + P YQP +D  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           ++L+AQN  LHDSVSKDL LE++AGEMDLDLWIKARIRFKVG+WKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K FKKT C  EV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0007603 vs. ExPASy TrEMBL
Match: A0A6J1DHJ8 (uncharacterized protein At1g08160 OS=Momordica charantia OX=3673 GN=LOC111020551 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.2e-75
Identity = 146/197 (74.11%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 1   MAGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLG 60
           MAGP Q PP +G   +L  VA+V++ALIVLVG+AV IIWLT+RPKRLSYTVE ASVQN  
Sbjct: 1   MAGPPQ-PPPSGRSRVLRCVALVLLALIVLVGLAVLIIWLTVRPKRLSYTVESASVQNFD 60

Query: 61  LSDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 120
           LS+TQLNASFNF VRAYNPNSRVS+YYD + VTVGFGDQDLA+G I P YQP + VT L+
Sbjct: 61  LSNTQLNASFNFRVRAYNPNSRVSVYYDKILVTVGFGDQDLAYGTINPFYQPHKGVTRLD 120

Query: 121 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 180
           +N  AQN PL++SVSKDL LEKAAGEMDLDLWIKA+IRFKVGIWKSGH+TLRI CSPVI+
Sbjct: 121 INPAAQNVPLYNSVSKDLGLEKAAGEMDLDLWIKAKIRFKVGIWKSGHQTLRIHCSPVII 180

Query: 181 YLSKGKDFKKTNCIAEV 198
           YLSK K F +T C AEV
Sbjct: 181 YLSKSKPFNETTCFAEV 196

[Close]

BLAST of Sed0007603 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 161.4 bits (407), Expect = 7.5e-40
Identity = 81/197 (41.12%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 2   AGPLQRPPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGL 61
           A PL+R      PS++  + +VI+ LI +  +   I WL  +PK+L YTVE ASVQN  L
Sbjct: 17  AQPLRR------PSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNL 76

Query: 62  -SDTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLN 121
            +D  ++A+F F ++++NPN R+S+YY  V + V F DQ LAF  ++P +QP  +V  ++
Sbjct: 77  TNDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQID 136

Query: 122 MNLDAQNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIV 181
             L A+N  +  S  KDL  + + G++  ++++KAR+RFKVGIWKS HRT +I+CS V V
Sbjct: 137 ETLIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTV 196

Query: 182 YLSKGKDFKKTNCIAEV 198
            LS+    + ++C A++
Sbjct: 197 SLSQPNKSQNSSCDADI 207

[Close]

BLAST of Sed0007603 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-28
Identity = 67/190 (35.26%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 8   PPRTGHPSILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQN--LGLSDTQ 67
           P R  +P +   VA+V++ L  LVG+A+ I +LT+RPKRL YTVE ASVQ   +G +D  
Sbjct: 30  PGRRMNPVLCIIVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH 89

Query: 68  LNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLNMNLDA 127
           +NA F++ +++YNP   VS+ Y  + ++    +Q +A   I P  Q P++ T +   L +
Sbjct: 90  INAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVS 149

Query: 128 QNTPLHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIVYLSKG 187
            N  L    ++DL  EK+ G ++++++I AR+ +K  I++S  RTL+  C+PV++ ++  
Sbjct: 150 HNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSS 209

Query: 188 K--DFKKTNC 194
               F++  C
Sbjct: 210 SLDGFQRVLC 217

[Close]

BLAST of Sed0007603 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 48/185 (25.95%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 16  ILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTVEGASVQNLGLS-DTQLNASFNFGV 75
           IL  +  +++A+ V++G+A  I+WL  RP  + + V  A++       +  L+ S +   
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNF 110

Query: 76  RAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPLYQPPQDVTWLNMNLDAQN-TPLHDS 135
              NPN RV +YYD  +V+  +GDQ      +   YQ  ++ T +   ++ QN   L D 
Sbjct: 111 TIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDG 170

Query: 136 VSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVIVYLSK-----GKDF 194
              DL  ++ +G   ++  ++  +RFK    KS     +I+C  + + L       G  F
Sbjct: 171 ARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKF 230

[Close]

BLAST of Sed0007603 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-14
Identity = 54/206 (26.21%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 3   GPLQRPP------RTGHP-----SILHRVAMVIVALIVLVGIAVFIIWLTIRPKRLSYTV 62
           GP   PP      R GH       +L     VI++LIV++G+A  I WL +RP+ + + V
Sbjct: 13  GPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHV 72

Query: 63  EGASVQNLGLS--DTQLNASFNFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLAFGKIKPL 122
             AS+     +  D  L  +    V   NPN R+ +YYD +     +  +  +   + P 
Sbjct: 73  TDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPF 132

Query: 123 YQPPQDVTWLNMNLDAQNTPLHDS-VSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGH 182
           YQ  ++ T L      QN  + ++  S+ L  E+ +G  ++++  + R+RFK+G  K   
Sbjct: 133 YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRR 192

Query: 183 RTLRIRCSPVIVYLSKGKDFKKTNCI 195
              ++ C  + + LS       T+ +
Sbjct: 193 IKPKVDCDDLRLPLSTSNGTTTTSTV 218

[Close]

BLAST of Sed0007603 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 46/170 (27.06%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 15  SILHRVAMVIVALIVL----VGIAVFIIWLTIRPKRLSYTVEGASVQNLGLSDTQLNASF 74
           S+  R++  I A+ +L    VG+  FI+WL++RP R  + ++   VQ L       NA  
Sbjct: 37  SLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARI 96

Query: 75  NFGVRAYNPNSRVSIYYDYVTVTVGFGDQDLA-FGKIKPLYQPPQDVTWLNMNLDAQNTP 134
            F V   NPN  + +Y+D +  ++ + DQ +     + P +Q P + T +   L   +  
Sbjct: 97  AFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLT 156

Query: 135 LHDSVSKDLLLEKAAGEMDLDLWIKARIRFKVGIWKSGHRTLRIRCSPVI 180
           ++ +   +   ++A G +   L I + IRFK+  W S H  +   C+ V+
Sbjct: 157 VNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVV 206

The following BLAST results are available for this feature:

BLAST of Sed0007603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937555.1	5.3e-80	76.65	uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharact...	[more]
XP_022969533.1	2.6e-79	75.63	uncharacterized protein At1g08160 [Cucurbita maxima]	[more]
KAG7020792.1	5.9e-79	75.63	hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038894942.1	3.8e-78	75.63	uncharacterized protein At1g08160-like [Benincasa hispida]	[more]
XP_008464346.1	6.1e-76	73.10	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 unchar...	[more]

BLAST of Sed0007603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	3.2e-27	35.26	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9FNH6	3.1e-14	30.65	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	1.5e-13	25.95	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9SJ52	3.4e-13	26.21	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SJ54	2.1e-10	26.99	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]

BLAST of Sed0007603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH28	2.6e-80	76.65	uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 ...	[more]
A0A6J1I194	1.3e-79	75.63	uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE...	[more]
A0A5D3DBK2	2.9e-76	73.10	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CLP6	2.9e-76	73.10	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S...	[more]
A0A6J1DHJ8	7.2e-75	74.11	uncharacterized protein At1g08160 OS=Momordica charantia OX=3673 GN=LOC111020551...	[more]

BLAST of Sed0007603 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	7.5e-40	41.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	2.3e-28	35.26	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	1.1e-14	25.95	NDR1/HIN1-like 2	[more]
AT2G35980.1	2.4e-14	26.21	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G05220.1	2.1e-13	27.06	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 74..175 e-value: 2.6E-12 score: 47.2
None	No IPR available	GENE3D	2.60.40.1820		coord: 35..174 e-value: 2.2E-6 score: 29.5
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 10..196
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 10..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007603.1	Sed0007603.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma