Sed0007596 (gene) Chayote v1

BLAST of Sed0007596 vs. NCBI nr
Match: YP_009945409.1 (RNA polymerase beta subunit [Sechium edule] >QIT04125.1 RNA polymerase subunit beta [Sechium edule] >QOE55939.1 RNA polymerase beta subunit [Sechium edule])

HSP 1 Score: 2127.4 bits (5511), Expect = 0.0e+00
Identity = 1060/1070 (99.07%), Postives = 1060/1070 (99.07%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFESSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. NCBI nr
Match: YP_009317378.1 (RNA polymerase beta subunit [Coccinia grandis] >YP_009560827.1 RpoB [Trichosanthes kirilowii] >YP_009753250.1 RNA polymerase subunit beta [Nothoalsomitra suberosa] >QIT04042.1 RNA polymerase subunit beta [Luffa aegyptiaca] >QKX48465.1 RNA polymerase beta subunit [Luffa acutangula] >AOX48715.1 RNA polymerase beta subunit [Coccinia grandis] >AOX48800.1 RNA polymerase beta subunit [Coccinia grandis] >QAB33182.1 RpoB [Trichosanthes kirilowii])

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1054/1070 (98.50%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. NCBI nr
Match: YP_009751898.1 (RNA polymerase subunit beta [Cyclanthera pedata] >QIT04716.1 RNA polymerase subunit beta [Cyclanthera pedata])

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1055/1070 (98.60%), Postives = 1057/1070 (98.79%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHG+TEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGVTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDD+NHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP
Sbjct: 301  GTLDDLNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G TRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQTAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. NCBI nr
Match: YP_009456138.1 (RNA polymerase beta subunit [Lagenaria siceraria] >QNM38523.1 RNA polymerase beta subunit [Lagenaria siceraria var. microcarpa] >AHM89264.1 RNA polymerase beta subunit [Lagenaria siceraria] >AHM89324.1 RNA polymerase beta subunit [Lagenaria siceraria] >AHM89501.1 RNA polymerase beta subunit [Lagenaria siceraria] >AHM89561.1 RNA polymerase beta subunit [Lagenaria siceraria])

HSP 1 Score: 2116.3 bits (5482), Expect = 0.0e+00
Identity = 1053/1070 (98.41%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPL+MYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLIMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. NCBI nr
Match: AHM90210.1 (RNA polymerase beta subunit [Lagenaria siceraria])

HSP 1 Score: 2115.9 bits (5481), Expect = 0.0e+00
Identity = 1052/1070 (98.32%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPL+MYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLIMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERL+YEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy Swiss-Prot
Match: Q4VZP1 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=2)

HSP 1 Score: 2103.9 bits (5450), Expect = 0.0e+00
Identity = 1048/1070 (97.94%), Postives = 1052/1070 (98.32%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIP FNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPAFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLL RDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLQRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYN EDAVLISERL+YEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLL NL
Sbjct: 661  PWEGYNFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLCNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPE+IRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy Swiss-Prot
Match: Q0ZJ28 (DNA-directed RNA polymerase subunit beta OS=Vitis vinifera OX=29760 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2015.4 bits (5220), Expect = 0.0e+00
Identity = 998/1070 (93.27%), Postives = 1026/1070 (95.89%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            M  GGNE MSTIPGFNQIQFEGFCRFID GLTEEL KFPKIEDTDQEIEFQLFVETY+LV
Sbjct: 1    MFRGGNEGMSTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKT RDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTSRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVI+QILQSPGIYYRSELDHNGISVY GTI+SDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVINQILQSPGIYYRSELDHNGISVYTGTIVSDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKE+AILEFYQQF+CVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKESAILEFYQQFACVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRN+N+RLNLDIP+NNTFLLP+DILAAADHLIG+KFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNINRRLNLDIPQNNTFLLPQDILAAADHLIGMKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            G LDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN+VRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GILDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            +TTT+ESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  VTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
             GNSLALN GIQEEQ+VPARYRQEFLTI WEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQ A DSGV  IAE  GKI+YTDTDKII SGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPVIAEHEGKIVYTDTDKIILSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G T  IPLVMYQRSNKNTCM QK+QV +GKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDTLSIPLVMYQRSNKNTCMHQKAQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVY DIY SFHIRKYEIQTHVTS GPERITN+IPHLEA LLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIPHLEAHLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIV+LGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPE IRVYISQKREIKVGDKVAGRHGNKGI+SKILPR+DMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQ+GRPVDMVFNPLGVPSRMNVG          G LLDRHYRI PFDE+YEQEASRKLV
Sbjct: 841  YLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDEKYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT +PWVFEPEYPGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIP PED PESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy Swiss-Prot
Match: Q2L8Z9 (DNA-directed RNA polymerase subunit beta OS=Gossypium hirsutum OX=3635 GN=rpoB PE=3 SV=1)

HSP 1 Score: 1993.8 bits (5164), Expect = 0.0e+00
Identity = 990/1070 (92.52%), Postives = 1020/1070 (95.33%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLG  N  MSTIPG NQIQFEGFC F+D GLTEEL KFPKIEDT+QEIEFQLFVETY+LV
Sbjct: 1    MLGDENGEMSTIPGLNQIQFEGFCGFMDRGLTEELYKFPKIEDTEQEIEFQLFVETYQLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKT +DMQEQTIFIGNIPLMNSLGTSIVNG+YR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTSKDMQEQTIFIGNIPLMNSLGTSIVNGIYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVI+QILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFL DKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLTDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRN+NQRLNL+IP+NNTFLLPRDILAAAD LIG+KFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNMNQRLNLNIPQNNTFLLPRDILAAADRLIGMKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            G LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN+VRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GPLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTA+FRIRDIHPSHYGR
Sbjct: 361  LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFY+I ERSKK +MLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYKIFERSKKAQMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
             GNSLALN GIQEEQ+VPARYRQEFLTI WEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVA DSGV AIA+  GKII TDTDKII SGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIADHEGKIISTDTDKIILSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G    IPLVMYQRSNKNTCM Q ++V +GKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDALGIPLVMYQRSNKNTCMHQTARVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYN EDAVLISERLVYEDIY SFHIRKYEIQTHVTS GPERITNEIPHLEA LLRNL
Sbjct: 661  PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRW+QKKGGSSYNPE IRVYISQKREIKVGDKVAGRHGNKGI+SKILPR+DMP
Sbjct: 781  GRGRVIDVRWVQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQ+GRPVDMVFNPLGVPSRMNVG          GSLLDRHYRI PFDERYEQEASRKLV
Sbjct: 841  YLQDGRPVDMVFNPLGVPSRMNVGQLFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELY+ASKQT +PWVFEPEYPGKSRIFDGRTG PFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYQASKQTANPWVFEPEYPGKSRIFDGRTGGPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPED PESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy Swiss-Prot
Match: Q3C1G7 (DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris OX=4096 GN=rpoB PE=3 SV=1)

HSP 1 Score: 1993.4 bits (5163), Expect = 0.0e+00
Identity = 987/1070 (92.24%), Postives = 1019/1070 (95.23%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLG GNE +STIPGFNQIQFEGFCRFID GLTEEL KFPKIEDTDQEIEFQLFVETY+LV
Sbjct: 1    MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWK  RDMQEQTIFIGNIPLMNSLGTSIVNG+YR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKNSRDMQEQTIFIGNIPLMNSLGTSIVNGIYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVI+QILQSPGIYYRSELDHNGISVY GTIISDWGGR ELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMG NLREILENVCYPEIFLSFL+DKE+KKIGSKENAILEFYQQF+CVGGDPVFS
Sbjct: 181  LVLSSAMGLNLREILENVCYPEIFLSFLSDKERKKIGSKENAILEFYQQFACVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRN+N+RLNLDIP+NNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            G LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN+VRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFYEISERS  VRMLYLSP RDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSTGVRMLYLSPGRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
             GNSLALN  IQEEQ+VPARYRQEFLTI WEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  AGNSLALNQDIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQ A DSG  AIAE+ G+++YT+TDKI+ +GN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGALAIAEREGRVVYTNTDKILLAGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G    IPLV+YQRSNKNTCM QK QV +GKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDILSIPLVIYQRSNKNTCMHQKLQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTS GPE++TNEIPHLEA LLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPEKVTNEIPHLEAHLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQ+ KESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQK+GGSSYNPE IRVYI QKREIKVGDKVAGRHGNKGI+SKILPR+DMP
Sbjct: 781  GRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQ+GR VDMVFNPLGVPSRMNVG          GSLLDRHYRI PFDERYEQEASRKLV
Sbjct: 841  YLQDGRSVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT +PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIP PED PESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy Swiss-Prot
Match: P06271 (DNA-directed RNA polymerase subunit beta OS=Nicotiana tabacum OX=4097 GN=rpoB PE=3 SV=1)

HSP 1 Score: 1993.4 bits (5163), Expect = 0.0e+00
Identity = 987/1070 (92.24%), Postives = 1019/1070 (95.23%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLG GNE +STIPGFNQIQFEGFCRFID GLTEEL KFPKIEDTDQEIEFQLFVETY+LV
Sbjct: 1    MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWK  RDMQEQTIFIGNIPLMNSLGTSIVNG+YR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKNSRDMQEQTIFIGNIPLMNSLGTSIVNGIYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVI+QILQSPGIYYRSELDHNGISVY GTIISDWGGR ELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMG NLREILENVCYPEIFLSFL+DKE+KKIGSKENAILEFYQQF+CVGGDPVFS
Sbjct: 181  LVLSSAMGLNLREILENVCYPEIFLSFLSDKERKKIGSKENAILEFYQQFACVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRN+N+RLNLDIP+NNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            G LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN+VRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLE+PFYEISERS  VRMLYLSP RDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSTGVRMLYLSPGRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
             GNSLALN  IQEEQ+VPARYRQEFLTI WEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  AGNSLALNQDIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQ A DSG  AIAE+ G+++YT+TDKI+ +GN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGALAIAEREGRVVYTNTDKILLAGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G    IPLV+YQRSNKNTCM QK QV +GKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDILSIPLVIYQRSNKNTCMHQKLQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTS GPE++TNEIPHLEA LLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPEKVTNEIPHLEAHLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQ+ KESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQK+GGSSYNPE IRVYI QKREIKVGDKVAGRHGNKGI+SKILPR+DMP
Sbjct: 781  GRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQ+GR VDMVFNPLGVPSRMNVG          GSLLDRHYRI PFDERYEQEASRKLV
Sbjct: 841  YLQDGRSVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT +PWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIP PED PESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy TrEMBL
Match: A0A6H0EQI1 (DNA-directed RNA polymerase subunit beta OS=Sechium edule OX=184140 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2127.4 bits (5511), Expect = 0.0e+00
Identity = 1060/1070 (99.07%), Postives = 1060/1070 (99.07%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFESSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy TrEMBL
Match: A0A2Z2CGF9 (DNA-directed RNA polymerase subunit beta OS=Coccinia grandis OX=387127 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1054/1070 (98.50%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy TrEMBL
Match: A0A6H0ENW9 (DNA-directed RNA polymerase subunit beta OS=Luffa aegyptiaca OX=3670 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1054/1070 (98.50%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy TrEMBL
Match: A0A6H0EVG0 (DNA-directed RNA polymerase subunit beta OS=Nothoalsomitra suberosa OX=386201 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1054/1070 (98.50%), Postives = 1056/1070 (98.69%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAE GGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEHGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            GYTRRIPLVMYQRSNKNTCM+QKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GYTRRIPLVMYQRSNKNTCMQQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIY SFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQT SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTASPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. ExPASy TrEMBL
Match: A0A6H0ETL4 (DNA-directed RNA polymerase subunit beta OS=Cyclanthera pedata OX=198836 GN=rpoB PE=3 SV=1)

HSP 1 Score: 2116.7 bits (5483), Expect = 0.0e+00
Identity = 1055/1070 (98.60%), Postives = 1057/1070 (98.79%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLGGGNERMSTIPGFNQIQFEGFCRFIDHG+TEELSKFPKIEDTDQEIEFQLFVETYKLV
Sbjct: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGVTEELSKFPKIEDTDQEIEFQLFVETYKLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVISQILQSPGIYYRSELDHNGISVY GTIISDWGGRLELEIDRKARIWARVSRKQKISI
Sbjct: 121  IVISQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
Sbjct: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM
Sbjct: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDD+NHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP
Sbjct: 301  GTLDDLNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
Sbjct: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480
            ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA
Sbjct: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSPSRDEYYMVA 480

Query: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
            TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481  TGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540

Query: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600
            RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN
Sbjct: 541  RALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGN 600

Query: 601  GYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
            G TRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM
Sbjct: 601  GDTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVAYM 660

Query: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720
            PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL
Sbjct: 661  PWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLRNL 720

Query: 721  DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780
            DKNGIVMLGSWVETGDILVGKLTPQ AKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
Sbjct: 721  DKNGIVMLGSWVETGDILVGKLTPQTAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG 780

Query: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840
            GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP
Sbjct: 781  GRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPREDMP 840

Query: 841  YLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRKLV 900
            YLQNGRPVDMVFNPLGVPSRMNVG          GSLLDRHYRIVPFDERYEQEASRKLV
Sbjct: 841  YLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLV 900

Query: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960
            FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG
Sbjct: 901  FSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG 960

Query: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020
            RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL
Sbjct: 961  RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL 1020

Query: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1061
            GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1021 GTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070

BLAST of Sed0007596 vs. TAIR 10
Match: ATCG00190.1 (RNA polymerase subunit beta )

HSP 1 Score: 1954.5 bits (5062), Expect = 0.0e+00
Identity = 968/1071 (90.38%), Postives = 1011/1071 (94.40%), Query Frame = 0

Query: 1    MLGGGNERMSTIPGFNQIQFEGFCRFIDHGLTEELSKFPKIEDTDQEIEFQLFVETYKLV 60
            MLG   E  S IPGFNQIQFEGF RFID GL EEL+KFPKIED D EIEFQLFVETY+LV
Sbjct: 1    MLGDEKEGTSAIPGFNQIQFEGFYRFIDQGLIEELAKFPKIEDIDHEIEFQLFVETYQLV 60

Query: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTRRDMQEQTIFIGNIPLMNSLGTSIVNGLYR 120
            EPLIKERDAVYESLTYSSELYVSAGLIWKT R+MQEQ IFIGNIPLMNSLGTSIVNG+YR
Sbjct: 61   EPLIKERDAVYESLTYSSELYVSAGLIWKTSRNMQEQRIFIGNIPLMNSLGTSIVNGIYR 120

Query: 121  IVISQILQSPGIYYRSELDHNGISVYNGTIISDWGGRLELEIDRKARIWARVSRKQKISI 180
            IVI+QILQSPGIYY+SELDHNGISVY GTIISDWGGRLELEID+KARIWARVSRKQKISI
Sbjct: 121  IVINQILQSPGIYYQSELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISI 180

Query: 181  LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS 240
            LVLSSAMG NLREILENVCYPEIFLSFL DKEKKKIGSKENAILEFYQQFSCVGGDP+FS
Sbjct: 181  LVLSSAMGLNLREILENVCYPEIFLSFLTDKEKKKIGSKENAILEFYQQFSCVGGDPIFS 240

Query: 241  ESLCKELQKKFFQQRCELGRIGRRNLNQRLNLDIPENNTFLLPRDILAAADHLIGLKFGM 300
            ESLCKELQKKFF QRCELGRIGRRN+N RLNL+IP+NN FLLPRD+LAAADHLIG+KFGM
Sbjct: 241  ESLCKELQKKFFHQRCELGRIGRRNINWRLNLNIPQNNIFLLPRDVLAAADHLIGMKFGM 300

Query: 301  GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTP 360
            GTLDDMNHLKNKRIRSVADLLQDQ GLAL RLEN+V+GTI GAIRHKL+PTPQNLVTSTP
Sbjct: 301  GTLDDMNHLKNKRIRSVADLLQDQLGLALARLENVVKGTISGAIRHKLIPTPQNLVTSTP 360

Query: 361  LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR 420
            LTTT+ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTA+FRIRDIHPSHYGR
Sbjct: 361  LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGR 420

Query: 421  ICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKK--VRMLYLSPSRDEYYM 480
            ICPIDTSEGINVGLIGSL+IHARIG WGSLE+PFYE+ E+SKK  +RML+LSPS+DEYYM
Sbjct: 421  ICPIDTSEGINVGLIGSLSIHARIGDWGSLESPFYELFEKSKKARIRMLFLSPSQDEYYM 480

Query: 481  VATGNSLALNPGIQEEQIVPARYRQEFLTIEWEQVHLRSIFPFQYFSIGASLIPFIEHND 540
            +A GNSLALN GIQEEQ VPARYRQEFLTI WE+VHLRSIFPFQYFSIGASLIPFIEHND
Sbjct: 481  IAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEEVHLRSIFPFQYFSIGASLIPFIEHND 540

Query: 541  ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFS 600
            ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVA DSGV AIAE  GKI+YTDT+KI+FS
Sbjct: 541  ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIAEHEGKILYTDTEKIVFS 600

Query: 601  GNGYTRRIPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATVGGELALGKNVLVA 660
            GNG T  IPL+MYQRSNKNTCM QK QV +GKCIKKGQILADGAATVGGELALGKN+LVA
Sbjct: 601  GNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNILVA 660

Query: 661  YMPWEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEIPHLEARLLR 720
            YMPWEGYN EDAVLISE LVY DIY SFHIRKYEIQTHVT+ GPERIT EIPHLE RLLR
Sbjct: 661  YMPWEGYNFEDAVLISECLVYGDIYTSFHIRKYEIQTHVTTQGPERITKEIPHLEGRLLR 720

Query: 721  NLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLP 780
            NLDKNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRAILGIQVSTSKETCLKLP
Sbjct: 721  NLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLP 780

Query: 781  IGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPRED 840
            IGGRGRVIDVRW+QKKGGSSYNPE+IRVYISQKREIKVGDKVAGRHGNKGI+SKILPR+D
Sbjct: 781  IGGRGRVIDVRWVQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQD 840

Query: 841  MPYLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIVPFDERYEQEASRK 900
            MPYLQ+GRPVDMVFNPLGVPSRMNVG          GSLLDRHYRI PFDERYEQEASRK
Sbjct: 841  MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK 900

Query: 901  LVFSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKI 960
            LVFSELYEASKQT +PWVFEPEYPGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 901  LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 960

Query: 961  HGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE 1020
            HGRSSGHYALVTQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE
Sbjct: 961  HGRSSGHYALVTQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE 1020

Query: 1021 VLGTTIIGGTIPKPEDTPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1060
            VLGTTIIGGTIPKPED PESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 1021 VLGTTIIGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 1071

BLAST of Sed0007596 vs. TAIR 10
Match: AT4G21710.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 163.7 bits (413), Expect = 8.1e-40
Identity = 194/836 (23.21%), Postives = 312/836 (37.32%), Query Frame = 0

Query: 304  DDMNHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLVPTPQNLVTSTPLTT 363
            DD +H  NKR+     LL   F +   +L   VR  +   + +      Q  + +  +T+
Sbjct: 388  DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITS 447

Query: 364  TFESFFGL------------HPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 423
              +                   +SQVL+R    + + H R+L+   P G  G+ A  + R
Sbjct: 448  GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLN--SPIGREGKLA--KPR 507

Query: 424  DIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYEISERSKKVRMLYLSP 483
             +H S +G +CP +T EG   GL+ +LA+   I   GS   P  E  E         +SP
Sbjct: 508  QLHNSQWGMMCPAETPEGQACGLVKNLALMVYI-TVGSAAYPILEFLEEWGTENFEEISP 567

Query: 484  S------------------RDEYYMVATGNSLALNPGIQEEQIVPARYRQEFLTIEWEQ- 543
            S                  RD   +V T   L     +  E  V    R + L I  +  
Sbjct: 568  SVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYG 627

Query: 544  ---------------VHLRSIFPFQ----------YFSIGASLIPFIEHNDANRALMSSN 603
                           +  R I+  Q          +  +    I +I+  +    ++S  
Sbjct: 628  RCSRPLFIVDNQKLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEEEETTMISMT 687

Query: 604  MQRQAVPLSRSEKCIVG--TGLERQVARDSGVAAIAEQGGKIIYTDTDKIIFSGNGYTRR 663
            +        R E+      T  E   +   GV A                          
Sbjct: 688  ISDLVQARLRPEEAYTENYTHCEIHPSLILGVCASI------------------------ 747

Query: 664  IPLVMYQRSNKNTCMRQKSQVHQGKCIKKGQILADGAATV------------------GG 723
            IP   + +S +NT      +   G  +   Q   D  A V                    
Sbjct: 748  IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 807

Query: 724  ELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYMSFHIRKY-----EIQTHVTSHGP 783
            +L  G N +VA   + GYN ED+V++++  +    + S   R Y     ++ T V     
Sbjct: 808  QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 867

Query: 784  ERITNEIPHLEARLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAI 843
                     +       LD +G+   G+ V   D+++GK TP ++++ +     R     
Sbjct: 868  RPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP-ISQDEAQGQSSRY---- 927

Query: 844  LGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAG 903
                  T ++  + L     G V  V       G  +    ++V +   R  ++GDK + 
Sbjct: 928  ------TRRDHSISLRHSETGMVDQVLLTTNADGLRF----VKVRVRSVRIPQIGDKFSS 987

Query: 904  RHGNKGIVSKILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGGSLLDRHYRIVPFDERYE 963
            RHG KG V     +EDMP+   G   D++ NP  +PSRM + G L++     V      E
Sbjct: 988  RHGQKGTVGMTYTQEDMPWTIEGVTPDIIVNPHAIPSRMTI-GQLIECIMGKVAAHMGKE 1047

Query: 964  QEAS--RKLVFSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKL 1023
             +A+    +    + +A  + G       +  G  R+++G TG P    + +G  Y  +L
Sbjct: 1048 GDATPFTDVTVDNISKALHKCGY------QMRGFERMYNGHTGRPLTAMIFLGPTYYQRL 1107

Query: 1024 IHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKS 1042
             H VDDKIH R  G   ++T+QP  GR++ GG R GEME   +   G AH L+E L  +S
Sbjct: 1108 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1167

BLAST of Sed0007596 vs. TAIR 10
Match: AT5G45140.1 (nuclear RNA polymerase C2 )

HSP 1 Score: 138.3 bits (347), Expect = 3.6e-32
Identity = 112/419 (26.73%), Postives = 177/419 (42.24%), Query Frame = 0

Query: 648  ELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYMSFHIRKYEI--QTHVTSHGPERI 707
            +L  G+N  VA M + GY+ EDA+++++  +         ++K     Q +        +
Sbjct: 754  KLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRIL 813

Query: 708  TNEIPHLEARLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGI 767
              +    +A  ++ LD +G+   G  +   DI + K  P            +   A+   
Sbjct: 814  IPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVP-------VDTVTKFTSALSDS 873

Query: 768  QVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHG 827
            Q   ++E   K P G    V  V     K G       I+  I   R  ++GDK + RHG
Sbjct: 874  QYRPARE-YFKGPEGETQVVDRVALCSDKKGQL----CIKYIIRHTRRPELGDKFSSRHG 933

Query: 828  NKGIVSKILPREDMPYLQNGRPVDMVFNPLGVPSRMNVG----------GSLLDRHYRIV 887
             KG+   I+ +ED P+ + G   D++ NP G PSRM VG          G    R +   
Sbjct: 934  QKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS 993

Query: 888  PFDERYEQEASRKLVFSELYEASKQTGSPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKP 947
             F ER       + + + L E              Y GK  ++ G +G P E  + +G  
Sbjct: 994  AFGERSGHADKVETISATLVEKGF----------SYSGKDLLYSGISGEPVEAYIFMGPI 1053

Query: 948  YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEM 1007
            Y  KL H V DK+H R SG   ++T+QP  G++K GG RVGEME   L  +G + ++ E 
Sbjct: 1054 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYER 1113

Query: 1008 LTYKSDHIRAR---------------QEVLGTTIIGGTIPKPEDTPESFRLLVRELRSL 1040
            L   SD    +               ++ + TT   G        P + +LL +EL+S+
Sbjct: 1114 LMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSM 1150

BLAST of Sed0007596 vs. TAIR 10
Match: AT3G23780.1 (nuclear RNA polymerase D2A )

HSP 1 Score: 125.6 bits (314), Expect = 2.4e-28
Identity = 167/779 (21.44%), Postives = 309/779 (39.67%), Query Frame = 0

Query: 299  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLV 358
            G    ++ +  +NKRI    +LL+ +  + L     ++   ++  + G      I H L 
Sbjct: 385  GKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLD 444

Query: 359  PTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDRTNPLTQIVHGRK----LSYL 418
             +    V +  L+  F +    HP  ++         L R NPL  ++  R+    + Y 
Sbjct: 445  AS----VITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYT 504

Query: 419  GPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYE 478
            G  G          R  HPSH+GR+C + T +G N GL+ ++++   +    SLE+   +
Sbjct: 505  GKVG--------DARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVS-TQSLESVVEK 564

Query: 479  ISERSKKVRM-LYLSPSRDEYYMVATGNSLALNPGIQE-EQIVPARYRQEFLTIEWEQVH 538
            +     +  M    +P   ++ ++  G+ + L    +     + +R RQ  L  E E   
Sbjct: 565  LFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQSELPREMEIKR 624

Query: 539  LRSIFPFQYFS-IGASLIPFIEHNDANRALMSSNMQ-----------RQAVPLSRSEKCI 598
             +     + F+  G  L P +   +  +       Q            + + +   E C 
Sbjct: 625  DKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLDHGILELIGIEEEEDCN 684

Query: 599  VGTGLERQVARDS-------------GVA------AIAEQGGKIIYTDTDKIIFSGNGYT 658
               G+++ +                 GV+      A  + G +++Y  + K      G++
Sbjct: 685  TAWGIKQLLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLY-QSQKHCQQAIGFS 744

Query: 659  RRIPLVMYQRSNKNTCMRQKS--QVHQGKCIKKGQILADGAATVGGELALGKNVLVAYMP 718
               P +     ++     QK   +    +C+KK ++L +           G+N +VA   
Sbjct: 745  STNPNIRCDTLSQQLFYPQKPLFKTLASECLKK-EVLFN-----------GQNAIVAVNV 804

Query: 719  WEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEI-----PHLEARL 778
              GYN ED++++++  +   ++ S  IR Y+ +         +  +E+      H +   
Sbjct: 805  HLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGK 864

Query: 779  LRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLK 838
            + +L+ +G   +G+ + TGDI++G+ T   A  S                        +K
Sbjct: 865  VDSLEDDGFPFIGANMSTGDIVIGRCTESGADHS------------------------IK 924

Query: 839  LPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPR 898
            L    RG V  V       G ++      V + Q R   +GDK +  HG KG++  +  +
Sbjct: 925  LKHTERGIVQKVVLSSNDEGKNF----AAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQ 984

Query: 899  EDMPYLQNGRPVDMVFNPLGVPSRMNVGGSLLDRHYR---IVPFDERYEQEASRKLV--- 958
            ++ P+   G   D+V NP   PSR    G LL+         P  +     A  KL    
Sbjct: 985  QNFPFTIQGIVPDIVINPHAFPSR-QTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHA 1044

Query: 959  -------FSELYEASKQTG-SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIH 1002
                    +E+ E   + G S W       G  R+++GR+G      + +G  +  +L+H
Sbjct: 1045 TPFSTPGVTEITEQLHRAGFSRW-------GNERVYNGRSGEMMRSMIFMGPTFYQRLVH 1101

BLAST of Sed0007596 vs. TAIR 10
Match: AT3G23780.2 (nuclear RNA polymerase D2A )

HSP 1 Score: 125.6 bits (314), Expect = 2.4e-28
Identity = 167/779 (21.44%), Postives = 309/779 (39.67%), Query Frame = 0

Query: 299  GMGTLDDMNHLKNKRIRSVADLLQDQFGLALV----RLENMVRGTICG-----AIRHKLV 358
            G    ++ +  +NKRI    +LL+ +  + L     ++   ++  + G      I H L 
Sbjct: 385  GKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLD 444

Query: 359  PTPQNLVTSTPLTTTFESFFGLHPLSQV---------LDRTNPLTQIVHGRK----LSYL 418
             +    V +  L+  F +    HP  ++         L R NPL  ++  R+    + Y 
Sbjct: 445  AS----VITNGLSRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLIDLRRTRQQVLYT 504

Query: 419  GPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLETPFYE 478
            G  G          R  HPSH+GR+C + T +G N GL+ ++++   +    SLE+   +
Sbjct: 505  GKVG--------DARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVS-TQSLESVVEK 564

Query: 479  ISERSKKVRM-LYLSPSRDEYYMVATGNSLALNPGIQE-EQIVPARYRQEFLTIEWEQVH 538
            +     +  M    +P   ++ ++  G+ + L    +     + +R RQ  L  E E   
Sbjct: 565  LFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELKSRRRQSELPREMEIKR 624

Query: 539  LRSIFPFQYFS-IGASLIPFIEHNDANRALMSSNMQ-----------RQAVPLSRSEKCI 598
             +     + F+  G  L P +   +  +       Q            + + +   E C 
Sbjct: 625  DKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLDHGILELIGIEEEEDCN 684

Query: 599  VGTGLERQVARDS-------------GVA------AIAEQGGKIIYTDTDKIIFSGNGYT 658
               G+++ +                 GV+      A  + G +++Y  + K      G++
Sbjct: 685  TAWGIKQLLKEPKIYTHCELDLSFLLGVSCAVVPFANHDHGRRVLY-QSQKHCQQAIGFS 744

Query: 659  RRIPLVMYQRSNKNTCMRQKS--QVHQGKCIKKGQILADGAATVGGELALGKNVLVAYMP 718
               P +     ++     QK   +    +C+KK ++L +           G+N +VA   
Sbjct: 745  STNPNIRCDTLSQQLFYPQKPLFKTLASECLKK-EVLFN-----------GQNAIVAVNV 804

Query: 719  WEGYNSEDAVLISERLVYEDIYMSFHIRKYEIQTHVTSHGPERITNEI-----PHLEARL 778
              GYN ED++++++  +   ++ S  IR Y+ +         +  +E+      H +   
Sbjct: 805  HLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKDSEKRKKMDELVQFGKTHSKIGK 864

Query: 779  LRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLK 838
            + +L+ +G   +G+ + TGDI++G+ T   A  S                        +K
Sbjct: 865  VDSLEDDGFPFIGANMSTGDIVIGRCTESGADHS------------------------IK 924

Query: 839  LPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIVSKILPR 898
            L    RG V  V       G ++      V + Q R   +GDK +  HG KG++  +  +
Sbjct: 925  LKHTERGIVQKVVLSSNDEGKNF----AAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQ 984

Query: 899  EDMPYLQNGRPVDMVFNPLGVPSRMNVGGSLLDRHYR---IVPFDERYEQEASRKLV--- 958
            ++ P+   G   D+V NP   PSR    G LL+         P  +     A  KL    
Sbjct: 985  QNFPFTIQGIVPDIVINPHAFPSR-QTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHA 1044

Query: 959  -------FSELYEASKQTG-SPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIH 1002
                    +E+ E   + G S W       G  R+++GR+G      + +G  +  +L+H
Sbjct: 1045 TPFSTPGVTEITEQLHRAGFSRW-------GNERVYNGRSGEMMRSMIFMGPTFYQRLVH 1101