Sed0007577 (gene) Chayote v1

Overview


Name	Sed0007577
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proline-rich nuclear receptor coactivator
Location	LG04: 33126468 .. 33128117 (+)
RNA-Seq Expression	Sed0007577
Synteny	Sed0007577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGTTTACTGATTCTTCATTTCCCTATATATCCACTATCTCACGCCTTGTGAACATCAAACAAAGCCTAAGCAGAGCAGAAAAATATTAATATATTTCTGAAAAGACGATAATACCCTTCTTCTTCCTCCTCCTCCTCGTTTTGTTTCAGTAACCCAGAATTGTTCATCTTTGATTCTTGATTTTTTTTTGTTTTTCGAGATTTCTTAGAGATTTTCACTTTTTTCATCCATGGGGACTGAGATCTTACGGCCTCAGGATTGTCTGATTCAAAGAATCAGAGCTCCACCGGCGGCGTTTTCTCGCCGGAAAAGTTCTTACGGAAGCTCCGATTCGTATGTTCATAGCTATAATCCTAGATCTAACAGGAAATCGGCGGTTCGGCCTGAGCAGCAGAGGAAGCGATTCGTTGTTTCGAATCACTCGGAGCCGTCGGTCCCGAAGAGATCGAGCTCCGATGATTTGAAAGCGATGAAAAGTAGTTTGGTTATTGAGAAGGTTACGATCTTGAGGCGAGGAGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGCGATAAACTGGTCGTGTGCGGGACTGAGAGGTTGGGACCGGCGCCGGAAATGGTGCAGAAACAGATCCGGATCGTCGACGGTAGGCGTTCGACCGCCGGAAGAGGCGACGTCTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGCATCCGCCATCGTCGACGACTCGGCCACAAGAGATCTGAGACGTTTGCTTCGAATCGACGCCTGAGAGATCTTTCTCCAGATCTTGAATTTGGATCTGAAAACCATCAACAAATCTCAACCTCTCGTCCATCTCCTCATCTCTCTCATCTTTCTAACGTCTCTCTCGGTCTGTTCCAGATCTGAACCGCCGTGATTTTTTTAAACGGCGGTGGATCGGAAAATCGAGATAGGTAAATCAGAGATATTCAACAAGGATATCTCATATATATATATAATCATATATTATGGTGTATTTATGGTGATCCAGGTTTGGTTTTAGGGGAAGAAATTCTGTGTATTTGTAAGTTTTTTAGCTTTAATCTAGGTCGGAACAACAGTAATTTGGATGGGTATGGGGGGTTTGATTTCTGCAAATATTGGGAATTAAAGTAGTTTGCGCTTTGAAAGATTTATTTTCTGCTCTGTTGTGAATTTCTTGTGAGTTCAAGGGCTTTGTTAGTGTTTTTTCTTTATTTTTCTGTATGATATTATGAAGTTTAATATAATAAGAAAACAAATCTGATGAGGATTTCATAGATCTGTTCGCCATAGCCATGGTTGTTCTATCAGTTCTTCTTCCCTTTGGCTTTAATTTTCGCCATTGAAGATAATTTCTGGAGCTCGAATCATTACTAGAAACAAGAATTGATAATATGTTGTTACAGTCAGATTTAGATTCAATACAGAAATTGAAGAGATGAATTTGTTTTGTTTCCTTGAAATGAAGTCACCGCCATGACTTTTTTGCTTTGAGGATGGGAATCGGCGGCACATGGGAGACATGGGAAAGAATAGTTGGTGGACGGTCTAATCGTAGAAAAATTGTCTATTTGTAATTTTGATCACCAATCGCAGA

mRNA sequence

GCCGTTTACTGATTCTTCATTTCCCTATATATCCACTATCTCACGCCTTGTGAACATCAAACAAAGCCTAAGCAGAGCAGAAAAATATTAATATATTTCTGAAAAGACGATAATACCCTTCTTCTTCCTCCTCCTCCTCGTTTTGTTTCAGTAACCCAGAATTGTTCATCTTTGATTCTTGATTTTTTTTTGTTTTTCGAGATTTCTTAGAGATTTTCACTTTTTTCATCCATGGGGACTGAGATCTTACGGCCTCAGGATTGTCTGATTCAAAGAATCAGAGCTCCACCGGCGGCGTTTTCTCGCCGGAAAAGTTCTTACGGAAGCTCCGATTCGTATGTTCATAGCTATAATCCTAGATCTAACAGGAAATCGGCGGTTCGGCCTGAGCAGCAGAGGAAGCGATTCGTTGTTTCGAATCACTCGGAGCCGTCGGTCCCGAAGAGATCGAGCTCCGATGATTTGAAAGCGATGAAAAGTAGTTTGGTTATTGAGAAGGTTACGATCTTGAGGCGAGGAGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGCGATAAACTGGTCGTGTGCGGGACTGAGAGGTTGGGACCGGCGCCGGAAATGGTGCAGAAACAGATCCGGATCGTCGACGGTAGGCGTTCGACCGCCGGAAGAGGCGACGTCTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGCATCCGCCATCGTCGACGACTCGGCCACAAGAGATCTGAGACGTTTGCTTCGAATCGACGCCTGAGAGATCTTTCTCCAGATCTTGAATTTGGATCTGAAAACCATCAACAAATCTCAACCTCTCGTCCATCTCCTCATCTCTCTCATCTTTCTAACGTCTCTCTCGGTCTGTTCCAGATCTGAACCGCCGTGATTTTTTTAAACGGCGGTGGATCGGAAAATCGAGATAGGTAAATCAGAGATATTCAACAAGGATATCTCATATATATATATAATCATATATTATGGTGTATTTATGGTGATCCAGGTTTGGTTTTAGGGGAAGAAATTCTGTGTATTTGTAAGTTTTTTAGCTTTAATCTAGGTCGGAACAACAGTAATTTGGATGGGTATGGGGGGTTTGATTTCTGCAAATATTGGGAATTAAAGTAGTTTGCGCTTTGAAAGATTTATTTTCTGCTCTGTTGTGAATTTCTTGTGAGTTCAAGGGCTTTGTTAGTGTTTTTTCTTTATTTTTCTGTATGATATTATGAAGTTTAATATAATAAGAAAACAAATCTGATGAGGATTTCATAGATCTGTTCGCCATAGCCATGGTTGTTCTATCAGTTCTTCTTCCCTTTGGCTTTAATTTTCGCCATTGAAGATAATTTCTGGAGCTCGAATCATTACTAGAAACAAGAATTGATAATATGTTGTTACAGTCAGATTTAGATTCAATACAGAAATTGAAGAGATGAATTTGTTTTGTTTCCTTGAAATGAAGTCACCGCCATGACTTTTTTGCTTTGAGGATGGGAATCGGCGGCACATGGGAGACATGGGAAAGAATAGTTGGTGGACGGTCTAATCGTAGAAAAATTGTCTATTTGTAATTTTGATCACCAATCGCAGA

Coding sequence (CDS)

ATGGGGACTGAGATCTTACGGCCTCAGGATTGTCTGATTCAAAGAATCAGAGCTCCACCGGCGGCGTTTTCTCGCCGGAAAAGTTCTTACGGAAGCTCCGATTCGTATGTTCATAGCTATAATCCTAGATCTAACAGGAAATCGGCGGTTCGGCCTGAGCAGCAGAGGAAGCGATTCGTTGTTTCGAATCACTCGGAGCCGTCGGTCCCGAAGAGATCGAGCTCCGATGATTTGAAAGCGATGAAAAGTAGTTTGGTTATTGAGAAGGTTACGATCTTGAGGCGAGGAGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAGAAGGAAGGCGATAAACTGGTCGTGTGCGGGACTGAGAGGTTGGGACCGGCGCCGGAAATGGTGCAGAAACAGATCCGGATCGTCGACGGTAGGCGTTCGACCGCCGGAAGAGGCGACGTCTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGCATCCGCCATCGTCGACGACTCGGCCACAAGAGATCTGAGACGTTTGCTTCGAATCGACGCCTGA

Protein sequence

MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSAVRPEQQRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDKLVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKHASAIVDDSATRDLRRLLRIDA

Homology

[Close]

BLAST of Sed0007577 vs. NCBI nr
Match: KAG6575030.1 (hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013605.1 hypothetical protein SDJN02_23772, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.4 bits (760), Expect = 9.3e-77
Identity = 162/197 (82.23%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSAVRPE--QQRKR 60
           MGTEILRPQDCLI+RIR PPA F RR+SSYG+ DS V +YN RSNRK+A R E  +QRKR
Sbjct: 1   MGTEILRPQDCLIERIRVPPAPFCRRRSSYGNYDSNVCNYNSRSNRKTAARSERPEQRKR 60

Query: 61  FVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDKLVVC 120
           F VSNHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD LVVC
Sbjct: 61  F-VSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVC 120

Query: 121 GTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKHASAI 180
           GTERLGPAPEM+ KQIRIVD R   +G+ DVYAGSAFSMSP PSSLPLPSFSKKKH S I
Sbjct: 121 GTERLGPAPEMIPKQIRIVDVRCPISGKADVYAGSAFSMSPCPSSLPLPSFSKKKHVSTI 180

Query: 181 VDDSATRDLRRLLRIDA 196
           VDDSATRDLRRLLR+DA
Sbjct: 181 VDDSATRDLRRLLRLDA 196

[Close]

BLAST of Sed0007577 vs. NCBI nr
Match: XP_004144965.1 (uncharacterized protein LOC101217755 [Cucumis sativus] >KGN46172.1 hypothetical protein Csa_005412 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-76
Identity = 163/201 (81.09%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYV-HSYNPRSNRKSAVRPE-----Q 60
           MGTEILRPQDCLI+RIR PPAAF RR+SSYG+ DS + ++YNPRSNRKS  R E     +
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           QRKRF V NHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD 
Sbjct: 61  QRKRF-VPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           +VVCGT+RLGPAPE V KQIRIVD R   AG+ DVYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 IVVCGTDRLGPAPETVAKQIRIVDVRSPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            SAIVDDSATRDLRRLLR+DA
Sbjct: 181 VSAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Sed0007577 vs. NCBI nr
Match: XP_008458522.1 (PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo] >KAA0033445.1 uncharacterized protein E6C27_scaffold111G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 6.0e-76
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYV-HSYNPRSNRKSAVRPE-----Q 60
           MGTEILRPQDCLI+RIR PPAAF RR+SSYG+ DS + ++YNPRSNRKS  R E     +
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           QRKRF V NHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD 
Sbjct: 61  QRKRF-VPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           +VVCGT+RLGPAPE V KQIRIVD R   AG+ DVYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 IVVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            S IVDDSATRDLRRLLR+DA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Sed0007577 vs. NCBI nr
Match: XP_022138318.1 (uncharacterized protein LOC111009532 [Momordica charantia])

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 166/201 (82.59%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSD-SYVHSYNPRSNRKSAV-----RPEQ 60
           MGTEILRPQDCLI+RIR PPAA  RR+SSYG+SD SYV+SYNPRSNRKSA      RPE 
Sbjct: 1   MGTEILRPQDCLIERIRVPPAALCRRRSSYGNSDSSYVYSYNPRSNRKSAAAARFERPE- 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           Q+KRF VSNHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSK KSEALKKEGD 
Sbjct: 61  QKKRF-VSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKFKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           LVVCGTERLGPAPEMV KQIRIVD R   +   DVYAGSAFSMSPSPSSLPLPSFSKKK 
Sbjct: 121 LVVCGTERLGPAPEMVPKQIRIVDVRCPIS---DVYAGSAFSMSPSPSSLPLPSFSKKKQ 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            S IVDDSATRDLRRLLR+DA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 196

[Close]

BLAST of Sed0007577 vs. NCBI nr
Match: XP_023514741.1 (uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 152/197 (77.16%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSAVRPE--QQRKR 60
           MGTEILRPQDCL  RI  P  AF RR+SSYG+SDS VH+YN RSNRKSA R E  +QRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVHNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDKLVVC 120
           F VSN SEPSV KRSSS+D K   +SLV+E VTILRRGESLD K K EALKKE D LVVC
Sbjct: 61  F-VSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVC 120

Query: 121 GTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKHASAI 180
           GTERLGPAPEMV KQIRIVD R    G+ DVYAGSAFSMSPSPSSLPLPSFSKKK  S I
Sbjct: 121 GTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTI 180

Query: 181 VDDSATRDLRRLLRIDA 196
           VDDSATRDLRRLLR+DA
Sbjct: 181 VDDSATRDLRRLLRLDA 196

[Close]

BLAST of Sed0007577 vs. ExPASy TrEMBL
Match: A0A0A0KCP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062315 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.9e-77
Identity = 163/201 (81.09%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYV-HSYNPRSNRKSAVRPE-----Q 60
           MGTEILRPQDCLI+RIR PPAAF RR+SSYG+ DS + ++YNPRSNRKS  R E     +
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           QRKRF V NHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD 
Sbjct: 61  QRKRF-VPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           +VVCGT+RLGPAPE V KQIRIVD R   AG+ DVYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 IVVCGTDRLGPAPETVAKQIRIVDVRSPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            SAIVDDSATRDLRRLLR+DA
Sbjct: 181 VSAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Sed0007577 vs. ExPASy TrEMBL
Match: A0A5A7SWA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001050 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYV-HSYNPRSNRKSAVRPE-----Q 60
           MGTEILRPQDCLI+RIR PPAAF RR+SSYG+ DS + ++YNPRSNRKS  R E     +
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           QRKRF V NHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD 
Sbjct: 61  QRKRF-VPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           +VVCGT+RLGPAPE V KQIRIVD R   AG+ DVYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 IVVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            S IVDDSATRDLRRLLR+DA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Sed0007577 vs. ExPASy TrEMBL
Match: A0A1S3C7J3 (uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYV-HSYNPRSNRKSAVRPE-----Q 60
           MGTEILRPQDCLI+RIR PPAAF RR+SSYG+ DS + ++YNPRSNRKS  R E     +
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           QRKRF V NHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSKIKSEALKKEGD 
Sbjct: 61  QRKRF-VPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           +VVCGT+RLGPAPE V KQIRIVD R   AG+ DVYAGSAFSMSPSPSSLPLPSFSKKKH
Sbjct: 121 IVVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKH 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            S IVDDSATRDLRRLLR+DA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Sed0007577 vs. ExPASy TrEMBL
Match: A0A6J1CCP9 (uncharacterized protein LOC111009532 OS=Momordica charantia OX=3673 GN=LOC111009532 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.5e-75
Identity = 166/201 (82.59%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSD-SYVHSYNPRSNRKSAV-----RPEQ 60
           MGTEILRPQDCLI+RIR PPAA  RR+SSYG+SD SYV+SYNPRSNRKSA      RPE 
Sbjct: 1   MGTEILRPQDCLIERIRVPPAALCRRRSSYGNSDSSYVYSYNPRSNRKSAAAARFERPE- 60

Query: 61  QRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDK 120
           Q+KRF VSNHSEPSV KRSSSDDLKAMK+SLV+EKVTILRRGESLDSK KSEALKKEGD 
Sbjct: 61  QKKRF-VSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKFKSEALKKEGDN 120

Query: 121 LVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKH 180
           LVVCGTERLGPAPEMV KQIRIVD R   +   DVYAGSAFSMSPSPSSLPLPSFSKKK 
Sbjct: 121 LVVCGTERLGPAPEMVPKQIRIVDVRCPIS---DVYAGSAFSMSPSPSSLPLPSFSKKKQ 180

Query: 181 ASAIVDDSATRDLRRLLRIDA 196
            S IVDDSATRDLRRLLR+DA
Sbjct: 181 VSTIVDDSATRDLRRLLRLDA 196

[Close]

BLAST of Sed0007577 vs. ExPASy TrEMBL
Match: A0A6J1EX01 (uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC111436920 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.9e-67
Identity = 150/197 (76.14%), Postives = 160/197 (81.22%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSAVRPE--QQRKR 60
           MGTEILRPQDCL  RI  P  AF RR+ SYG+SDS V +YN RSNRKSA R +  +QRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVCNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDKLVVC 120
           F VSN SEPSV KRSSS+D K   +SLV+E VTILRRGESLDSK K EALKKE D LVVC
Sbjct: 61  F-VSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVC 120

Query: 121 GTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKKKHASAI 180
           GTERLGPAPEMV KQIRIVD R    G+ DVYAGSAFSMSPSPSSLPLPSFSKKK  S I
Sbjct: 121 GTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTI 180

Query: 181 VDDSATRDLRRLLRIDA 196
           VDDSATRDLRRLLR+DA
Sbjct: 181 VDDSATRDLRRLLRLDA 196

[Close]

BLAST of Sed0007577 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 7.5e-16
Identity = 69/198 (34.85%), Postives = 97/198 (48.99%), Query Frame = 0


Query: 1   MGTEILRPQDCLIQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSAVRPEQQRKRFV 60
           MGTEI+RPQ+CL+ R+R  PA F      + S  ++ H       RK  ++P+Q+R    
Sbjct: 1   MGTEIIRPQNCLVDRMRDSPATF------FNSRRNHFH-------RKPPLKPDQRR---- 60

Query: 61  VSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEGDKLVVCGT 120
                      R  SD+ +    ++V       R+GES DS    +  K           
Sbjct: 61  -----------RFGSDEFRTTTKNIV------RRKGESFDSFSNIKVRKY---------- 120

Query: 121 ERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSA-FSMSPSPSSLPLPSFSKKKHASAIV 180
                +PE+                  D+YAGS+ F++SP+PSSLPLPSFSKKK  S +V
Sbjct: 121 -----SPEV---------------SADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVV 134

Query: 181 ----DDSATRDLRRLLRI 194
               DDSA++DLRRLLR+
Sbjct: 181 VVSIDDSASQDLRRLLRL 134

[Close]

BLAST of Sed0007577 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 5.0e-12
Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 1   MGTEILRPQDCL------IQRIRAPPAAFSRRKSSYGSSDSYVHSYNPRSNRKSA--VRP 60
           MG  +L PQDCL      +++ R P A  +R+K +  ++ +       +S+R S+  V P
Sbjct: 1   MGVAVLNPQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAP 60

Query: 61  EQQRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDSKIKSEALKKEG 120
                R  VS      VPK +     K++ +++ + +V IL+RGE +  K  S+ + +  
Sbjct: 61  PLPPPRAAVS----AFVPKGTLK---KSLSNTVAVSQVRILKRGEEI-PKETSDLVVEMS 120

Query: 121 DKLVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDVYAGSAFSMSPSPSSLPLPSFSKK 180
           D   +  T R+GP P ++  QIR+  GR+S +     YAG     SP PS +PLP+F  K
Sbjct: 121 D---LGSTRRIGPDPGLIPGQIRL-SGRKSKS--APFYAGPVTMTSPPPSDVPLPAFFTK 179

Query: 181 KHASAIVDDSATRDLRRLLRID 195
           K         AT DL R+LR+D
Sbjct: 181 K---------ATNDLIRILRLD 179

[Close]

BLAST of Sed0007577 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06
Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 90  VTILRRGESLDSKIKSEALKKEGDKLVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDV 149
           V IL+RGE ++ KI  E       K  +    ++G  P  +   IRI + +   A     
Sbjct: 59  VRILKRGEDINVKIPIE-------KPDLKSNRQIGSDPMKISTPIRISNRKSMPA---LF 118

Query: 150 YAGSAFSMSPSPSSLPLPSFSKKKHASAIVDDSATRDLRRLLRID 195
           YAG   S SP PS +PLP+F   K  +      AT DL ++LR+D
Sbjct: 119 YAGPVTSTSPPPSEVPLPAFFANKTVAGFKPTDATNDLIKILRLD 153

[Close]

BLAST of Sed0007577 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 47/145 (32.41%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 42  PRSNRKSAVRPEQQRKRFVVSNHSEPSVPKRSSSDDLKAMKSSLVIEKVTILRRGESLDS 101
           PR  R S+  P ++++         P+V K        A   +LV+E+V IL+RGE+L +
Sbjct: 26  PRLCRNSSTAPRRRKQ--------SPTVVKS------PAANPNLVMEQVKILKRGETLSA 85

Query: 102 KIKSE-----------ALKKEGD-KLVVCGTERLGPAPEMVQKQIRIVDGRRSTAGRGDV 161
             K++            LK   D  L+V  T R+GP PE++ KQI  + G +S       
Sbjct: 86  FNKNKENISSDDTRRPVLKMIKDVDLIVSATNRIGPEPEILMKQIGAL-GLQS------- 145

Query: 162 YAGSAFSMSPSPSSLPLPSFSKKKH 175
           +AG+  S+SP PS +P+P F   K+
Sbjct: 146 FAGANCSLSPPPSCVPIPCFLGTKN 148

The following BLAST results are available for this feature:

BLAST of Sed0007577 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575030.1	9.3e-77	82.23	hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004144965.1	1.2e-76	81.09	uncharacterized protein LOC101217755 [Cucumis sativus] >KGN46172.1 hypothetical ...	[more]
XP_008458522.1	6.0e-76	80.60	PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo] >KAA0033445.1 unc...	[more]
XP_022138318.1	1.1e-74	82.59	uncharacterized protein LOC111009532 [Momordica charantia]	[more]
XP_023514741.1	1.6e-68	77.16	uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0007577 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0007577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCP9	5.9e-77	81.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062315 PE=4 SV=1	[more]
A0A5A7SWA1	2.9e-76	80.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C7J3	2.9e-76	80.60	uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=...	[more]
A0A6J1CCP9	5.5e-75	82.59	uncharacterized protein LOC111009532 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1EX01	1.9e-67	76.14	uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]

BLAST of Sed0007577 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21570.1	7.5e-16	34.85	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G32020.1	5.0e-12	32.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G25250.1	4.1e-06	34.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	1.2e-05	32.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 150..169 e-value: 1.9E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..78
None	No IPR available	PANTHER	PTHR33670:SF1	OS01G0384800 PROTEIN	coord: 1..194
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 1..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007577.1	Sed0007577.1	mRNA