Sed0007516 (gene) Chayote v1

Overview
NameSed0007516
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
LocationLG14: 1228866 .. 1229820 (+)
RNA-Seq ExpressionSed0007516
SyntenySed0007516
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAATTAGTAATAAATGGAATATTGTTTGTTATATAGTAAAAAAGGAAACTTCGAGGAAGCTGCAATGGCGAAACTCTCGCCGTTTCTCCCTTCCATTTAAATCCCCATAAATTCTTCATCTCTCTCTCGTTCTCATCCATTTCCATTTTCGATTACAATTTCAATTTCCCCAATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGAGTGAAGGATCTGACGGCTGTGGTGATTTGATGGGATGGTTCATGGTTTTCTTTCTTTCTTTTTTTTTGGTTTTTTGTTCGAGTGTTGAATTGACACATGATAGTTATTTTTGAGATATTTTTGTGGCCGGTTCGACCGGGTCTGTCTTTTTTTATGGTAATTCGATGATCTAATGAAGAAAATGTCAATACAACTTTGCAATTTGGGTTTCCTTATTTTTATTATATATAATATTGGGGC

mRNA sequence

AAAAAATTAGTAATAAATGGAATATTGTTTGTTATATAGTAAAAAAGGAAACTTCGAGGAAGCTGCAATGGCGAAACTCTCGCCGTTTCTCCCTTCCATTTAAATCCCCATAAATTCTTCATCTCTCTCTCGTTCTCATCCATTTCCATTTTCGATTACAATTTCAATTTCCCCAATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGAGTGAAGGATCTGACGGCTGTGGTGATTTGATGGGATGGTTCATGGTTTTCTTTCTTTCTTTTTTTTTGGTTTTTTGTTCGAGTGTTGAATTGACACATGATAGTTATTTTTGAGATATTTTTGTGGCCGGTTCGACCGGGTCTGTCTTTTTTTATGGTAATTCGATGATCTAATGAAGAAAATGTCAATACAACTTTGCAATTTGGGTTTCCTTATTTTTATTATATATAATATTGGGGC

Coding sequence (CDS)

ATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGA

Protein sequence

MKIPKRFTPKRLFRSKNSNPTADDPPSPSSSSSSAAGSATPTTVLPRDCSDSGQTHPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRVGSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAEFVRMMELQR
Homology
BLAST of Sed0007516 vs. NCBI nr
Match: XP_022932888.1 (probable calcium-binding protein CML36 [Cucurbita moschata] >KAG6603330.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-56
Identity = 135/197 (68.53%), Postives = 151/197 (76.65%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTAD----DPPS----PSSSSSSA--------AGSATPTTV 60
           MKIPKRF+PKRLFRSK  NP+A+    DPPS     SSSSSS+        AG  TPT+V
Sbjct: 1   MKIPKRFSPKRLFRSK-KNPSAEVSRSDPPSFGSGTSSSSSSSENFFKPHTAGYGTPTSV 60

Query: 61  LPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRV 120
           L   CSDS Q     VVS KELEAILSRIASE+EVA+ML E+ GG   GFI+L  ++ RV
Sbjct: 61  LLAGCSDSDQRENDGVVSRKELEAILSRIASEEEVAMMLSEVDGG---GFIRLDELMARV 120

Query: 121 GSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENG 180
           GSGF+  GESELRETF+FFD DHDGRI+AEELHG + SIGDERCTLEDCRRMI DVDE+G
Sbjct: 121 GSGFDAVGESELRETFEFFDADHDGRISAEELHGVYRSIGDERCTLEDCRRMIRDVDEDG 180

BLAST of Sed0007516 vs. NCBI nr
Match: XP_023543601.1 (probable calcium-binding protein CML36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTAD----DPPS----PSSSSSSA--------AGSATPTTV 60
           MKIPKRF+PKRLFRSK  NP+AD    DPPS     SSSSSS+        AG  TPT+V
Sbjct: 1   MKIPKRFSPKRLFRSK-KNPSADVSRSDPPSFGSGTSSSSSSSENFFKPHTAGYGTPTSV 60

Query: 61  LPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRV 120
           L   CSDS Q     VVS KELEAILSRIASE+EVA+ML E+ GG   GFI+L  ++ RV
Sbjct: 61  LLAGCSDSDQRENDGVVSRKELEAILSRIASEEEVAMMLSEVDGG---GFIRLDELMARV 120

Query: 121 GSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENG 180
           GSGF+   ESELRETF+FFD DHDGRI+AEELHG + SIGDERCTLEDCRRMI DVDE+G
Sbjct: 121 GSGFDSVAESELRETFEFFDADHDGRISAEELHGVYRSIGDERCTLEDCRRMIRDVDEDG 180

BLAST of Sed0007516 vs. NCBI nr
Match: XP_022153870.1 (probable calcium-binding protein CML36 [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 7.0e-55
Identity = 132/201 (65.67%), Postives = 146/201 (72.64%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTA---DDPP------SPSSSSS----------SAAGSATP 60
           MKIPKRF+PKRLFRSK +        DPP      S SSSSS          SA G  TP
Sbjct: 1   MKIPKRFSPKRLFRSKKNRADVSRRSDPPSFGSATSSSSSSSENFFKPQTAASAGGYGTP 60

Query: 61  TTVLPRDCSDSGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQLSA 120
           T+VLP   +D  + + VVS KELEAIL RI     SE+EVA+MLGE  G   DGFI+L A
Sbjct: 61  TSVLPDSAADWSENNGVVSRKELEAILHRIGADPPSEEEVAMMLGEFDG---DGFIRLEA 120

Query: 121 VLDRVGSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIAD 179
           ++DRVGSGF PA E+ELRE F+FFD DHDGRITAEELHG F SIGDERCTLEDCRRMIAD
Sbjct: 121 LMDRVGSGFGPACEAELREAFEFFDADHDGRITAEELHGVFSSIGDERCTLEDCRRMIAD 180

BLAST of Sed0007516 vs. NCBI nr
Match: XP_038883626.1 (probable calcium-binding protein CML35 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 134/199 (67.34%), Postives = 149/199 (74.87%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSK---NSNPTADDPPS-----PSSSSSS---------AAGSATPTT 60
           MKIPKRF+PKRLFRSK   +++ +  DPPS      SSSSSS         A G  TPT+
Sbjct: 1   MKIPKRFSPKRLFRSKKYHSADVSRSDPPSFGSGTSSSSSSSETFFKPNATATGYGTPTS 60

Query: 61  VLPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGEL--GGGGRDGFIQLSAVL 120
           VLP D  DSGQ     VVS KELEAILSRIASE+EVA+ML E+  GGGG DGFI L  ++
Sbjct: 61  VLPPDWPDSGQRENDGVVSRKELEAILSRIASEEEVAMMLSEVSSGGGGGDGFIWLEELM 120

Query: 121 DRVGSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVD 179
            +VG+G E AGESELRETF+FFD D DGRITAEELH  F SIGDE+CTLEDCRRMI DVD
Sbjct: 121 AQVGTGVEAAGESELRETFEFFDADQDGRITAEELHEVFRSIGDEQCTLEDCRRMIRDVD 180

BLAST of Sed0007516 vs. NCBI nr
Match: XP_022967907.1 (probable calcium-binding protein CML36 [Cucurbita maxima])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTAD----DPPS----PSSSSSSA--------AGSATPTTV 60
           MKIPKRF+PKRLFRSK  NP+AD    DPPS     SSSSSS+        AG  TPT+V
Sbjct: 1   MKIPKRFSPKRLFRSK-KNPSADVSRSDPPSFGSGTSSSSSSSENFFKPHTAGYGTPTSV 60

Query: 61  LPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRV 120
           L   CSDS Q     VVS KELEAILSRIASE+EVA+ML E+  G   GFI+L  ++ RV
Sbjct: 61  L-AGCSDSDQRENDVVVSRKELEAILSRIASEEEVAMMLSEVDDG---GFIRLDELMARV 120

Query: 121 GSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENG 180
           GSGF+  GESELRETF+FFD DHDGRI+AEELHG + SIGDERCTLEDCRRMI DVDE+G
Sbjct: 121 GSGFDAVGESELRETFEFFDADHDGRISAEELHGVYRSIGDERCTLEDCRRMIRDVDEDG 180

BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0

Query: 3   IPKRFTPKRLFRSK-NSNPTADDPPSPSSSS---------SSAAGSATPTTVLPRDCSD- 62
           IPKRF  +   RS  + +PTA    S SSSS             GS TPT++LP   S  
Sbjct: 7   IPKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTSILPEVPSPY 66

Query: 63  ------------SGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQL 122
                              VS  +LE++LSR+     +E+E+ VML E+   G DG I+L
Sbjct: 67  SYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCDG-DGTIRL 126

Query: 123 SAVLDRVGSGFEPAGES-ELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRM 180
             +  RV S  +PA +S EL+ETF+FFD D DG I+A+EL   F +IGDERCTL+DC+RM
Sbjct: 127 EELASRVVS-LDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCTLDDCKRM 186

BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-29
Identity = 88/200 (44.00%), Postives = 116/200 (58.00%), Query Frame = 0

Query: 6   RFTPKRLFRSKNSNPTADDPPSPSSSSSSAAGS------------ATPTTVLPRDCSD-- 65
           R +PKRLFR+K+    +   PS  SS++S++ S            ATP +VLP++  D  
Sbjct: 9   RLSPKRLFRTKSKASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQNSGDFY 68

Query: 66  ----------SGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQLSA 125
                           VVS  +L A++SR++    S++EV++ML E+ GG   G I L  
Sbjct: 69  TELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGD-GGCISLED 128

Query: 126 VLDRVG--SGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMI 176
           +  RV   SG       ELRE F+ FD D +G+I+AEELH  FG IGDERCTLE+C RMI
Sbjct: 129 LASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMI 188

BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q5ZCK5 (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 GN=CML16 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-15
Identity = 60/125 (48.00%), Postives = 70/125 (56.00%), Query Frame = 0

Query: 59  VSIKELEAILSRIA---SED----EVAVMLGELGGGGRDGFIQLSAVLDRVGSGFEPA-G 118
           +S  EL A+   IA   SE     EVA M+ EL    RDGF+ L       G G   A  
Sbjct: 43  ISPSELAAVTRAIAPPPSESAGGREVAAMMNEL-DTDRDGFVDLGEFAAFHGRGRGDAEH 102

Query: 119 ESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAE 176
           E+ELR  FD +D D DGRITA EL    G IG E C+ E+C RMIA VD +GDG V F E
Sbjct: 103 EAELRAAFDVYDVDGDGRITAAELGKVLGRIG-EGCSAEECERMIASVDVDGDGCVGFEE 162

BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.6e-15
Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 0

Query: 12  LFRSKNSNPTADDPPSPSSSSSSAAGSATPT-------TVLPRDCSDSGQTHPVVSIKEL 71
           LFR ++ + +   PP P +  +S  GS  PT            D +  G+    +S  EL
Sbjct: 9   LFRRRSGSKS---PPLPQADPASGGGSPAPTPEEEMERVFRKFDANGDGR----ISRSEL 68

Query: 72  EAI---LSRIASEDEVAVMLGELGGGGRDGFIQLS--AVLDRVGSGFEPAGESELRETFD 131
            A+   L   A++DE+A M+ E    G DGFI L   A L+   SG   A E +LR  F 
Sbjct: 69  GALFESLGHAATDDELARMMAEADADG-DGFISLDEFAALNATASGDAAAVEEDLRHAFR 128

Query: 132 FFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAEFVRMM 176
            FD D +G I+A EL      +G E+ T++ CRRMI  VD+NGDG + F EF  MM
Sbjct: 129 VFDADGNGTISAAELARVLHGLG-EKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175

BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-14
Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0

Query: 59  VSIKELEAI---LSRIASEDEVAVMLGE--LGGGG---RDGFIQLSAVLDRVGSGFEPAG 118
           +SI EL+ +   LS  AS++E   M+ E  L G G    D F+ L  + D+  +    + 
Sbjct: 31  ISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNN---SA 90

Query: 119 ESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAE 176
             +L+E FD +D D +GRI+A ELH    ++G E+C+++DC+RMI  VD +GDG V F E
Sbjct: 91  IRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCVDFEE 150

BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1F310 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111439413 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56
Identity = 135/197 (68.53%), Postives = 151/197 (76.65%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTAD----DPPS----PSSSSSSA--------AGSATPTTV 60
           MKIPKRF+PKRLFRSK  NP+A+    DPPS     SSSSSS+        AG  TPT+V
Sbjct: 1   MKIPKRFSPKRLFRSK-KNPSAEVSRSDPPSFGSGTSSSSSSSENFFKPHTAGYGTPTSV 60

Query: 61  LPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRV 120
           L   CSDS Q     VVS KELEAILSRIASE+EVA+ML E+ GG   GFI+L  ++ RV
Sbjct: 61  LLAGCSDSDQRENDGVVSRKELEAILSRIASEEEVAMMLSEVDGG---GFIRLDELMARV 120

Query: 121 GSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENG 180
           GSGF+  GESELRETF+FFD DHDGRI+AEELHG + SIGDERCTLEDCRRMI DVDE+G
Sbjct: 121 GSGFDAVGESELRETFEFFDADHDGRISAEELHGVYRSIGDERCTLEDCRRMIRDVDEDG 180

BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1DI26 (probable calcium-binding protein CML36 OS=Momordica charantia OX=3673 GN=LOC111021283 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55
Identity = 132/201 (65.67%), Postives = 146/201 (72.64%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTA---DDPP------SPSSSSS----------SAAGSATP 60
           MKIPKRF+PKRLFRSK +        DPP      S SSSSS          SA G  TP
Sbjct: 1   MKIPKRFSPKRLFRSKKNRADVSRRSDPPSFGSATSSSSSSSENFFKPQTAASAGGYGTP 60

Query: 61  TTVLPRDCSDSGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQLSA 120
           T+VLP   +D  + + VVS KELEAIL RI     SE+EVA+MLGE  G   DGFI+L A
Sbjct: 61  TSVLPDSAADWSENNGVVSRKELEAILHRIGADPPSEEEVAMMLGEFDG---DGFIRLEA 120

Query: 121 VLDRVGSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIAD 179
           ++DRVGSGF PA E+ELRE F+FFD DHDGRITAEELHG F SIGDERCTLEDCRRMIAD
Sbjct: 121 LMDRVGSGFGPACEAELREAFEFFDADHDGRITAEELHGVFSSIGDERCTLEDCRRMIAD 180

BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1HS37 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111467281 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.8e-55
Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSKNSNPTAD----DPPS----PSSSSSSA--------AGSATPTTV 60
           MKIPKRF+PKRLFRSK  NP+AD    DPPS     SSSSSS+        AG  TPT+V
Sbjct: 1   MKIPKRFSPKRLFRSK-KNPSADVSRSDPPSFGSGTSSSSSSSENFFKPHTAGYGTPTSV 60

Query: 61  LPRDCSDSGQ--THPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRV 120
           L   CSDS Q     VVS KELEAILSRIASE+EVA+ML E+  G   GFI+L  ++ RV
Sbjct: 61  L-AGCSDSDQRENDVVVSRKELEAILSRIASEEEVAMMLSEVDDG---GFIRLDELMARV 120

Query: 121 GSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENG 180
           GSGF+  GESELRETF+FFD DHDGRI+AEELHG + SIGDERCTLEDCRRMI DVDE+G
Sbjct: 121 GSGFDAVGESELRETFEFFDADHDGRISAEELHGVYRSIGDERCTLEDCRRMIRDVDEDG 180

BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A5A7VA05 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00410 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.2e-53
Identity = 131/196 (66.84%), Postives = 148/196 (75.51%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSK---NSNPTADDPPS----PSSSSSSA----------AGSATPTT 60
           MKIPKRF+PKRLFRSK   +++ +  DPPS     SSSSSS+           G  TPT+
Sbjct: 2   MKIPKRFSPKRLFRSKKHQSADVSRSDPPSFGSGTSSSSSSSENFFKPNSVNTGYGTPTS 61

Query: 61  VLPRDCSDSGQTHPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRVG 120
           VL    SD  +   VV+ KELEAILSRIASE+EVA+ML E+  GG DGFI+L  ++ RVG
Sbjct: 62  VLD---SDVRENEGVVTRKELEAILSRIASEEEVAMMLSEVDSGG-DGFIRLEELMARVG 121

Query: 121 SGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGD 180
           SG E AGESELRETF+FFD D DGRITAEELHG F SIGDE+CTLEDCRRMI DVDENGD
Sbjct: 122 SG-EAAGESELRETFEFFDADQDGRITAEELHGVFRSIGDEQCTLEDCRRMIRDVDENGD 181

BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A1S3C5U3 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103497255 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.2e-53
Identity = 131/196 (66.84%), Postives = 148/196 (75.51%), Query Frame = 0

Query: 1   MKIPKRFTPKRLFRSK---NSNPTADDPPS----PSSSSSSA----------AGSATPTT 60
           MKIPKRF+PKRLFRSK   +++ +  DPPS     SSSSSS+           G  TPT+
Sbjct: 2   MKIPKRFSPKRLFRSKKHQSADVSRSDPPSFGSGTSSSSSSSENFFKPNSVNTGYGTPTS 61

Query: 61  VLPRDCSDSGQTHPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRVG 120
           VL    SD  +   VV+ KELEAILSRIASE+EVA+ML E+  GG DGFI+L  ++ RVG
Sbjct: 62  VLD---SDVRENEGVVTRKELEAILSRIASEEEVAMMLSEVDSGG-DGFIRLEELMARVG 121

Query: 121 SGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGD 180
           SG E AGESELRETF+FFD D DGRITAEELHG F SIGDE+CTLEDCRRMI DVDENGD
Sbjct: 122 SG-EAAGESELRETFEFFDADQDGRITAEELHGVFRSIGDEQCTLEDCRRMIRDVDENGD 181

BLAST of Sed0007516 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0

Query: 3   IPKRFTPKRLFRSK-NSNPTADDPPSPSSSS---------SSAAGSATPTTVLPRDCSD- 62
           IPKRF  +   RS  + +PTA    S SSSS             GS TPT++LP   S  
Sbjct: 7   IPKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTSILPEVPSPY 66

Query: 63  ------------SGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQL 122
                              VS  +LE++LSR+     +E+E+ VML E+   G DG I+L
Sbjct: 67  SYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCDG-DGTIRL 126

Query: 123 SAVLDRVGSGFEPAGES-ELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRM 180
             +  RV S  +PA +S EL+ETF+FFD D DG I+A+EL   F +IGDERCTL+DC+RM
Sbjct: 127 EELASRVVS-LDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCTLDDCKRM 186

BLAST of Sed0007516 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 88/200 (44.00%), Postives = 116/200 (58.00%), Query Frame = 0

Query: 6   RFTPKRLFRSKNSNPTADDPPSPSSSSSSAAGS------------ATPTTVLPRDCSD-- 65
           R +PKRLFR+K+    +   PS  SS++S++ S            ATP +VLP++  D  
Sbjct: 9   RLSPKRLFRTKSKASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQNSGDFY 68

Query: 66  ----------SGQTHPVVSIKELEAILSRIA----SEDEVAVMLGELGGGGRDGFIQLSA 125
                           VVS  +L A++SR++    S++EV++ML E+ GG   G I L  
Sbjct: 69  TELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGD-GGCISLED 128

Query: 126 VLDRVG--SGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMI 176
           +  RV   SG       ELRE F+ FD D +G+I+AEELH  FG IGDERCTLE+C RMI
Sbjct: 129 LASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMI 188

BLAST of Sed0007516 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15
Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0

Query: 59  VSIKELEAI---LSRIASEDEVAVMLGE--LGGGG---RDGFIQLSAVLDRVGSGFEPAG 118
           +SI EL+ +   LS  AS++E   M+ E  L G G    D F+ L  + D+  +    + 
Sbjct: 31  ISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNN---SA 90

Query: 119 ESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAE 176
             +L+E FD +D D +GRI+A ELH    ++G E+C+++DC+RMI  VD +GDG V F E
Sbjct: 91  IRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSDGDGCVDFEE 150

BLAST of Sed0007516 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 77.8 bits (190), Expect = 9.9e-15
Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0

Query: 58  VVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRVGSGFEPAGE-----S 117
           V  +KE+   LS  AS +E   M+ +    G +GFI L   +     G    G      S
Sbjct: 35  VDELKEVIRALSPTASPEETVTMMKQFDLDG-NGFIDLDEFVALFQIGIGGGGNNRNDVS 94

Query: 118 ELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAEFV 176
           +L+E F+ +D D +GRI+A+ELH    ++G E+C+++DC++MI+ VD +GDG V F EF 
Sbjct: 95  DLKEAFELYDLDGNGRISAKELHSVMKNLG-EKCSVQDCKKMISKVDIDGDGCVNFDEFK 154

BLAST of Sed0007516 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 0

Query: 59  VSIKELEAILSRI---ASEDEVAVMLGELGGGGRDGFIQLSAVLDRVGSGFEPAGESE-L 118
           +S KEL AI++ +     E+E+   + E+   G DG+I     ++    G +     E L
Sbjct: 53  ISSKELGAIMTSLGHEVPEEELEKAITEIDRKG-DGYINFEEFVELNTKGMDQNDVLENL 112

Query: 119 RETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAEFVRM 178
           ++ F  +D D +G I+AEELH    S+GDE C++ +CR+MI  VD++GDG + F EF  M
Sbjct: 113 KDAFSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEFKIM 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022932888.16.3e-5668.53probable calcium-binding protein CML36 [Cucurbita moschata] >KAG6603330.1 putati... [more]
XP_023543601.11.1e-5568.53probable calcium-binding protein CML36 [Cucurbita pepo subsp. pepo][more]
XP_022153870.17.0e-5565.67probable calcium-binding protein CML36 [Momordica charantia][more]
XP_038883626.11.2e-5467.34probable calcium-binding protein CML35 [Benincasa hispida][more]
XP_022967907.11.2e-5468.53probable calcium-binding protein CML36 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SS311.6e-3046.83Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 ... [more]
P301886.9e-2944.00Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 ... [more]
Q5ZCK52.5e-1548.00Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q8RZB55.6e-1537.50Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9C8Y14.8e-1440.00Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ... [more]
Match NameE-valueIdentityDescription
A0A6J1F3103.1e-5668.53probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1DI263.4e-5565.67probable calcium-binding protein CML36 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1HS375.8e-5568.53probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC1114672... [more]
A0A5A7VA059.2e-5366.84Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C5U39.2e-5366.84probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103497255 P... [more]
Match NameE-valueIdentityDescription
AT3G10190.11.2e-3146.83Calcium-binding EF-hand family protein [more]
AT2G41410.14.9e-3044.00Calcium-binding EF-hand family protein [more]
AT1G66400.13.4e-1540.00calmodulin like 23 [more]
AT5G37770.19.9e-1538.21EF hand calcium-binding protein family [more]
AT1G24620.15.4e-1336.59EF hand calcium-binding protein family [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 150..178
e-value: 4.4E-5
score: 32.9
coord: 113..141
e-value: 1.4E-4
score: 31.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 112..175
e-value: 2.9E-9
score: 37.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 109..144
score: 14.178661
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 146..179
score: 12.7281
IPR002048EF-hand domainCDDcd00051EFhcoord: 113..175
e-value: 1.3722E-17
score: 71.0397
NoneNo IPR availableGENE3D1.10.238.10coord: 56..179
e-value: 8.3E-22
score: 79.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..56
NoneNo IPR availablePANTHERPTHR10891:SF790CALCIUM-BINDING PROTEIN CML35-RELATEDcoord: 2..177
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 2..177
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 159..171
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 122..134
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 59..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007516.1Sed0007516.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding