Sed0007463 (gene) Chayote v1

Overview


Name	Sed0007463
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Location	Contig00347: 87110 .. 89283 (-)
RNA-Seq Expression	Sed0007463
Synteny	Sed0007463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATTGATACATCACAAATACAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACCGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGGATACAACAACAGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTGCAGATGGTACAAAACTACTTTTTAAAAAATCTGCTTCCATCGAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTAAAGCTATTCAGTAATTCCTTTTGGTTATCACCTTGTTTTAGTCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATCTCTCTACGTGTGATTCGTTGAGACATAAACTTCTCCCACTTTTTTTCTAGAAAAGAGGTGAGAATAGATATCTTCATTTTTCTATTCAGAATTCGGATTAATGAACTAAATCAGATAGTTATATGAGTGAAAGAAAACAGCTTATATAAATAAAAATTAGCAGTCAAAATATTGAGTCTCATTTTCTATGTATAAGAGTTAAGCAGAAATAAACATAGGCGCAAGTCCCAAGATTGGTTAACTAGTTATCCTGTCTTGAAGCGGACTCAAAGATCAAGCGGATTAAGTTTTTTCACTATTATTTGTATGTACTACCATATATGTATTACCATAACACAGCCGATTGAGCAAAAATGAGTGGATGGTTAGAAACACCAAGATATACAAAGGATTAGTAATGGATATTTTCAAAATTATCCAAGAGAAGGACATTTTTGCAAAATTCATAATATAAAAAGAATACAAATTGGGGCTTTAATTTTGTAGAAATGATCAGGCAGTACTCCCCACGATTCCGATCCAGAGTATGCGCCTATCCACCCATTAAATAAATGACTATCGGAAACGAAATAATCCCTTATTTAGTAAGTCCCCTTTTTATCAGAAAGAAGAATAGGAACAAAAAAAAAGATCGTTTTTATTGTTTCTTATCTACATCTATTTATTTATTTCCTATTTCTCTATTCATATAGATAGAATTCGTGTCCGAATTCATGAACTAATGGAATAGCCAATTTTTTTTTTCGTAATTGAAAACGCTGGGTTATTGATATTTATAAAAAATAGTATTTTAGTGAATAATTAAGTTATTACTCAACAAATAATTTTTTTTTTATTTTATTTTTATATTAAGGGATGAGATCAATTCAGAAGTACCCTTTTTCTTTATTATTAGAACAGACAGAATTCTATTGGGTTAATTTGGGGACACACAATAGATTTTTATCCGATACTATTCGACATATCAAGATAAATAATCCCGACACGCTCCTTAGATTTATTTATGGCCCTCAAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAATAGCGATGAGAACAGTGATGTTATTACCGACTATAATTATCTAACAGTTCGAGTACCGTTGATATAGTTGAGGCTCAATCAAAATATGGTTTTTGGGGGTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTATAATTTCTTCCTTAGCAGAATGCGAGCGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTTATCAAACCGAGTATTCGGGTATAAAATTTGGTTTTATTTTATGTTGCTTCCTACCTAAATCTATTAGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGAATATCTCTATCCCATACATATTCGGTTATGAACTATTTGAAATAAATAAAGCATATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACTTCTTTTCAACTCTTTTCACTGTAA

mRNA sequence

ATGATAATTGATACATCACAAATACAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACCGTATTGGGAATCACAATAGGCGTACTAGGATACAACAACAGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTGCAGATGGTACAAAACTACTTTTTAAAAAATCTGCTTCCATCGAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTAAAGCTATTCATCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATCTCTCTACTTGAGGCTCAATCAAAATATGGTTTTTGGGGGTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTATAATTTCTTCCTTAGCAGAATGCGAGCGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGAATATCTCTATCCCATACATATTCGGTTATGAACTATTTGAAATAAATAAAGCATATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACTTCTTTTCAACTCTTTTCACTGTAA

Coding sequence (CDS)

ATGATAATTGATACATCACAAATACAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACCGTATTGGGAATCACAATAGGCGTACTAGGATACAACAACAGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTGCAGATGGTACAAAACTACTTTTTAAAAAATCTGCTTCCATCGAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTAAAGCTATTCATCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATCTCTCTACTTGAGGCTCAATCAAAATATGGTTTTTGGGGGTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTATAATTTCTTCCTTAGCAGAATGCGAGCGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGAATATCTCTATCCCATACATATTCGGTTATGAACTATTTGAAATAAATAAAGCATATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACTTCTTTTCAACTCTTTTCACTGTAA

Protein sequence

MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLGYNNRIGPEYAGPLGVLQALQMVQNYFLKNLLPSRGDTRLFSIGPSIAVISILKLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLEAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEELVAVSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQLFSL

Homology

[Close]

BLAST of Sed0007463 vs. NCBI nr
Match: YP_009945463.1 (NADH-plastoquinone oxidoreductase subunit 1 [Sechium edule] >QIT04187.1 NADH dehydrogenase subunit A [Sechium edule] >QOE55993.1 NADH-plastoquinone oxidoreductase subunit 1 [Sechium edule])

HSP 1 Score: 522.7 bits (1345), Expect = 2.1e-144
Identity = 292/363 (80.44%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             + +DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLVDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. NCBI nr
Match: QJD26526.1 (NdhA [Trichosanthes kirilowii var. japonica] >QJD26613.1 NdhA [Trichosanthes kirilowii var. japonica])

HSP 1 Score: 518.8 bits (1335), Expect = 3.1e-143
Identity = 290/363 (79.89%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. NCBI nr
Match: YP_009752466.1 (NADH dehydrogenase subunit A [Trichosanthes tricuspidata] >YP_009752630.1 NADH dehydrogenase subunit A [Trichosanthes homophylla] >YP_009753228.1 NADH dehydrogenase subunit A [Trichosanthes truncata] >YP_009753759.1 NADH dehydrogenase subunit A [Trichosanthes nervifolia] >YP_009753923.1 NADH dehydrogenase subunit A [Trichosanthes lobata] >QIT05111.1 NADH dehydrogenase subunit A [Trichosanthes kirilowii] >QIT04862.1 NADH dehydrogenase subunit A [Trichosanthes tricuspidata] >QIT05026.1 NADH dehydrogenase subunit A [Trichosanthes homophylla] >QIT05370.1 NADH dehydrogenase subunit A [Trichosanthes nervifolia] >QIT05871.1 NADH dehydrogenase subunit A [Trichosanthes lobata])

HSP 1 Score: 518.1 bits (1333), Expect = 5.3e-143
Identity = 289/363 (79.61%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. NCBI nr
Match: YP_009317441.1 (NADH dehydrogenase subunit 1 [Coccinia grandis] >YP_009753306.1 NADH dehydrogenase subunit A [Nothoalsomitra suberosa] >QIT04104.1 NADH dehydrogenase subunit A [Luffa aegyptiaca] >QKX48530.1 NADH-plastoquinone oxidoreductase subunit 1 [Luffa acutangula] >AOX48719.1 NADH dehydrogenase subunit 1 [Coccinia grandis] >AOX48804.1 NADH dehydrogenase subunit 1 [Coccinia grandis] >QIT06378.1 NADH dehydrogenase subunit A [Nothoalsomitra suberosa])

HSP 1 Score: 518.1 bits (1333), Expect = 5.3e-143
Identity = 289/363 (79.61%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. NCBI nr
Match: YP_009752207.1 (NADH dehydrogenase subunit A [Linnaeosicyos amara] >YP_009752218.1 NADH dehydrogenase subunit A [Linnaeosicyos amara] >QIT05617.1 NADH dehydrogenase subunit A [Linnaeosicyos amara] >QIT05628.1 NADH dehydrogenase subunit A [Linnaeosicyos amara])

HSP 1 Score: 517.7 bits (1332), Expect = 6.9e-143
Identity = 287/363 (79.06%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGI+WVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGIIWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             + +DLHIGVFLWIAISSVAPIGLLM+GYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLVDLHIGVFLWIAISSVAPIGLLMAGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 2.1e-142
Identity = 284/363 (78.24%), Postives = 291/363 (80.17%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDI+SFSRLEFLKE YGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DL IGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYI GYELFEINK YEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYILGYELFEINKVYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot
Match: Q0ZIW3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhA PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.0e-133
Identity = 265/363 (73.00%), Postives = 283/363 (77.96%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDT ++QDINSFSRLE+LKEVYGI+W+LVPI T VLGITIGVL           G   
Sbjct: 1   MIIDTPEVQDINSFSRLEYLKEVYGIIWMLVPIFTPVLGITIGVLAIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISILKLFI------ 120
           RIGPEYAGPLG+LQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL  ++      
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLIIPFGS 120

Query: 121 -----DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
                DL+IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 NLVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW++SIPYIF  E FEINKA EV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDLSIPYIFVPEFFEINKAGEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FG TI IFITLAKTYLFLFI I TRWTLPRLR+DQLLNLGWKFLLPISLGNLLLTTS QL
Sbjct: 301 FGTTIGIFITLAKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot
Match: Q2L952 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhA PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.1e-130
Identity = 258/363 (71.07%), Postives = 281/363 (77.41%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MII T++++DINSF  LE LKEVYGI+W+LVPILT VLGITIGVL           G   
Sbjct: 1   MIIYTTEVEDINSFYTLESLKEVYGIIWMLVPILTLVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISILKLF------- 120
           RIGPEYAGPLG+LQAL    +  F +N+LPSRG+TRLFSIGP+IAVISIL  F       
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENILPSRGNTRLFSIGPAIAVISILLSFSVIPFSS 120

Query: 121 ----IDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
                DL+IG+FLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLILADLNIGIFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGF++F+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       +SSLFVTVLYLGGWNISIPY+F  ELFEINK   +
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLLSSLFVTVLYLGGWNISIPYVFAPELFEINKINGI 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
            G TI IFITLAKTYLFLFISIATRWTLPRLR+DQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 IGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot
Match: Q09WW3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Morus indica OX=248361 GN=ndhA PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 1.8e-130
Identity = 257/363 (70.80%), Postives = 276/363 (76.03%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MI  T ++QDINSFSR EFLKE YGI+W  +PI T VLGITIGVL           G   
Sbjct: 1   MISHTPEVQDINSFSRFEFLKETYGIIWAFIPIFTPVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NL PSRG+TRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGAKLLFKENLFPSRGETRLFSIGPSIAVISILVSYSVVPFGS 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             + +DL+IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLVDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGF+IF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           +A                       VSSLFVT+LYLGGWNISIPYIF ++ FEINK Y V
Sbjct: 241 IAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTILYLGGWNISIPYIFVFDFFEINKTYGV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           F  TI +FITLAKTYLFLFI I TRWTLPRLR+DQLLNLGWKFLLPISLGNLLLTTS QL
Sbjct: 301 FEPTIGMFITLAKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot
Match: A0A390 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=13443 GN=ndhA PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 4.1e-130
Identity = 260/363 (71.63%), Postives = 279/363 (76.86%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDT+++Q INSF +LE LKEVYGI+W+L+PI T VLGITIGVL           G   
Sbjct: 1   MIIDTTELQAINSFFKLESLKEVYGIIWILIPIFTLVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLG+LQAL    +  F +NLLPSRGD RLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDARLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLTIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGF+IF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGWN+SIPYIF  E+F+INKA +V
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFVSEIFDINKAGKV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FG  I IFITLAKTYLFLFI IATRWTLPRLR+DQLLNLGWKFLLPISLGNLLLTTS QL
Sbjct: 301 FGPVIGIFITLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy TrEMBL
Match: A0A6H0EQZ9 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Sechium edule OX=184140 GN=ndhA PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.0e-144
Identity = 292/363 (80.44%), Postives = 296/363 (81.54%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             + +DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLVDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy TrEMBL
Match: A0A6M3RU33 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ndhA PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.5e-143
Identity = 290/363 (79.89%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy TrEMBL
Match: A0A6H0ES46 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhA PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 289/363 (79.61%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy TrEMBL
Match: A0A2Z2CG87 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coccinia grandis OX=387127 GN=ndhA PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 289/363 (79.61%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. ExPASy TrEMBL
Match: A0A6H0EQZ3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=ndhA PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 289/363 (79.61%), Postives = 295/363 (81.27%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MIIDTSQ+QDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL           G   
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLGVLQAL    +  F +NLLPSRGDTRLFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGFVIF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFVIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           VA                       VSSLFVTVLYLGGW+ISIPYIFGYELFEINKAYEV
Sbjct: 241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDISIPYIFGYELFEINKAYEV 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 3.4e-124
Identity = 248/363 (68.32%), Postives = 273/363 (75.21%), Query Frame = 0


Query: 1   MIIDTSQIQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVL-----------GYNN 60
           MII  + +Q INSF +LE LKEVYG++W+ VPI + VLGI  GVL           G   
Sbjct: 1   MIIYATAVQTINSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQAL-QMVQNYFLKNLLPSRGDTRLFSIGPSIAVISIL---------- 120
           RIGPEYAGPLG+LQAL    +  F +NL PSRG+T LFSIGPSIAVISIL          
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 120

Query: 121 -KLFIDLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
             +  DL+IG+FLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLL----------EAQSKYGFWGWNLWRQPIGFVIFIISSLAECERLPFDLPEAEEEL 240
           SISLL          EAQSKYGFWGWNLWRQPIGF+IF+ISSLAECERLPFDLPEAEEEL
Sbjct: 181 SISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEEL 240

Query: 241 VA-----------------------VSSLFVTVLYLGGWNISIPYIFGYELFEINKAYEV 300
           +A                       +SSLFVTVLYLGGWNISIPYI   ELF+ +   ++
Sbjct: 241 IAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELFQRD---QI 300

Query: 301 FGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFLLPISLGNLLLTTSFQL 308
           FG TI IFITLAKTYLFLF+SIATRWTLPRLR+DQLLNLGWKFLLPISLGNLLLTTSFQL
Sbjct: 301 FGTTIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQL 360

[Close]

BLAST of Sed0007463 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-24
Identity = 100/309 (32.36%), Postives = 150/309 (48.54%), Query Frame = 0


Query: 26  ILWVLVPILTTVLGITIGVLG-------YNNRIGPEYAGPLGVLQALQMVQNYFLKN-LL 85
           IL +++P+L   LG+   VL           R GP+  G  G+LQ L       LK  + 
Sbjct: 9   ILGIILPLL---LGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPIS 68

Query: 86  PSRGDTRLFSIGP-----------SIAVISILKLFIDLHIGVFLWIAISSVAPIGLLMSG 145
           PS  +  LF + P           ++       +  D +IG+    AISS+   G++++G
Sbjct: 69  PSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAG 128

Query: 146 YGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL---EAQSKYGFWGWNLWRQ----P 205
             SN+KY+FLG LR+AAQ +SYE+ + L ++++ +       S+       +W      P
Sbjct: 129 RSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQIWSGIPLFP 188

Query: 206 IGFVIFIISSLAECERLPFDLPEAEEELVA-----VSSLFVTVLYLGGWNISIPYIFGYE 265
           +  V+F+IS LAE  R PFDLPEAE E VA      SS+   + +LG +   I       
Sbjct: 189 V-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCT 248

Query: 266 LFEINKAYEVFGMTI------SIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFL 298
           LF       +  + I      SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  
Sbjct: 249 LFFPGGWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVF 308

[Close]

BLAST of Sed0007463 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-24
Identity = 100/309 (32.36%), Postives = 150/309 (48.54%), Query Frame = 0


Query: 26  ILWVLVPILTTVLGITIGVLG-------YNNRIGPEYAGPLGVLQALQMVQNYFLKN-LL 85
           IL +++P+L   LG+   VL           R GP+  G  G+LQ L       LK  + 
Sbjct: 9   ILGIILPLL---LGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPIS 68

Query: 86  PSRGDTRLFSIGP-----------SIAVISILKLFIDLHIGVFLWIAISSVAPIGLLMSG 145
           PS  +  LF + P           ++       +  D +IG+    AISS+   G++++G
Sbjct: 69  PSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAG 128

Query: 146 YGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL---EAQSKYGFWGWNLWRQ----P 205
             SN+KY+FLG LR+AAQ +SYE+ + L ++++ +       S+       +W      P
Sbjct: 129 RSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQIWSGIPLFP 188

Query: 206 IGFVIFIISSLAECERLPFDLPEAEEELVA-----VSSLFVTVLYLGGWNISIPYIFGYE 265
           +  V+F+IS LAE  R PFDLPEAE E VA      SS+   + +LG +   I       
Sbjct: 189 V-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCT 248

Query: 266 LFEINKAYEVFGMTI------SIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFL 298
           LF       +  + I      SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  
Sbjct: 249 LFFPGGWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVF 308

[Close]

BLAST of Sed0007463 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-24
Identity = 100/309 (32.36%), Postives = 150/309 (48.54%), Query Frame = 0


Query: 26  ILWVLVPILTTVLGITIGVLG-------YNNRIGPEYAGPLGVLQALQMVQNYFLKN-LL 85
           IL +++P+L   LG+   VL           R GP+  G  G+LQ L       LK  + 
Sbjct: 9   ILGIILPLL---LGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPIS 68

Query: 86  PSRGDTRLFSIGP-----------SIAVISILKLFIDLHIGVFLWIAISSVAPIGLLMSG 145
           PS  +  LF + P           ++       +  D +IG+    AISS+   G++++G
Sbjct: 69  PSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAG 128

Query: 146 YGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL---EAQSKYGFWGWNLWRQ----P 205
             SN+KY+FLG LR+AAQ +SYE+ + L ++++ +       S+       +W      P
Sbjct: 129 RSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICVGPRNSSEIVMAQKQIWSGIPLFP 188

Query: 206 IGFVIFIISSLAECERLPFDLPEAEEELVA-----VSSLFVTVLYLGGWNISIPYIFGYE 265
           +  V+F+IS LAE  R PFDLPEAE E VA      SS+   + +LG +   I       
Sbjct: 189 V-LVMFLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCT 248

Query: 266 LFEINKAYEVFGMTI------SIFITLAKTYLFLFISIATRWTLPRLRIDQLLNLGWKFL 298
           LF       +  + I      SI+ ++ K  LFLF+ I  R   PR R DQL+ LG K  
Sbjct: 249 LFFPGGWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVF 308

The following BLAST results are available for this feature:

BLAST of Sed0007463 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009945463.1	2.1e-144	80.44	NADH-plastoquinone oxidoreductase subunit 1 [Sechium edule] >QIT04187.1 NADH deh...	[more]
QJD26526.1	3.1e-143	79.89	NdhA [Trichosanthes kirilowii var. japonica] >QJD26613.1 NdhA [Trichosanthes kir...	[more]
YP_009752466.1	5.3e-143	79.61	NADH dehydrogenase subunit A [Trichosanthes tricuspidata] >YP_009752630.1 NADH d...	[more]
YP_009317441.1	5.3e-143	79.61	NADH dehydrogenase subunit 1 [Coccinia grandis] >YP_009753306.1 NADH dehydrogena...	[more]
YP_009752207.1	6.9e-143	79.06	NADH dehydrogenase subunit A [Linnaeosicyos amara] >YP_009752218.1 NADH dehydrog...	[more]

BLAST of Sed0007463 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD36	2.1e-142	78.24	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q0ZIW3	1.0e-133	73.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q2L952	1.1e-130	71.07	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Gossypium hirsutum OX...	[more]
Q09WW3	1.8e-130	70.80	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Morus indica OX=24836...	[more]
A0A390	4.1e-130	71.63	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=134...	[more]

BLAST of Sed0007463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0EQZ9	1.0e-144	80.44	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Sechium edule OX=1841...	[more]
A0A6M3RU33	1.5e-143	79.89	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A6H0ES46	2.5e-143	79.61	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A2Z2CG87	2.5e-143	79.61	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coccinia grandis OX=3...	[more]
A0A6H0EQZ3	2.5e-143	79.61	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Luffa aegyptiaca OX=3...	[more]

BLAST of Sed0007463 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01100.1	3.4e-124	68.32	NADH dehydrogenase family protein	[more]
ATMG01120.1	5.3e-24	32.36	NADH dehydrogenase 1B	[more]
ATMG00516.1	5.3e-24	32.36	NADH dehydrogenase 1C	[more]
ATMG01275.1	5.3e-24	32.36	NADH dehydrogenase 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 47..209 e-value: 7.9E-42 score: 143.6
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 26..303
None	No IPR available	PANTHER	PTHR11432:SF3	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1	coord: 26..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007463.1	Sed0007463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding