Homology
BLAST of Sed0007459 vs. NCBI nr
Match:
XP_022145389.1 (putative pentatricopeptide repeat-containing protein At3g15930 [Momordica charantia])
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 587/703 (83.50%), Postives = 648/703 (92.18%), Query Frame = 0
Query: 12 LISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPE 71
L+ L+QTCKSM QL QIHC+AIK+GL NP+LQN V+ FC THEHGD+KYAH+LFDEIPE
Sbjct: 43 LLYLLQTCKSMDQLQQIHCQAIKTGLHANPVLQNGVMTFCCTHEHGDLKYAHHLFDEIPE 102
Query: 72 PNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAMEYGREL 131
PNVF+WNTMIRGYSRLD P+ GVSLYLEMLRRDV+PD YT+PFLFKGFTRDIA+EYG+E
Sbjct: 103 PNVFLWNTMIRGYSRLDSPELGVSLYLEMLRRDVKPDGYTFPFLFKGFTRDIALEYGKEF 162
Query: 132 HGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKF 191
HGHVLK GLQSNVFVQTALVQMYL CGL+D+ARGV D+CSKADVITWNMMISAYNK GKF
Sbjct: 163 HGHVLKHGLQSNVFVQTALVQMYLLCGLVDMARGVLDSCSKADVITWNMMISAYNKDGKF 222
Query: 192 EESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENAL 251
EESR+LFL M+EKQVLPTT+TL+LILSACSKLKDLK GK V YV N VE +LILENAL
Sbjct: 223 EESRKLFLGMQEKQVLPTTVTLVLILSACSKLKDLKTGKLVHRYVNNCQVECSLILENAL 282
Query: 252 MDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWT 311
+DMYA C EMD+ALGIFR+M+ RDIISWT++V+GFTNL EIDVARNYFD+MPEKD+VSWT
Sbjct: 283 IDMYAACGEMDAALGIFRNMSNRDIISWTSVVAGFTNLGEIDVARNYFDKMPEKDYVSWT 342
Query: 312 AMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDRN 371
AMI+GYL VNRFKEAL LFRNMQ TNV+PDEFTMVSIL ACAHLG LELGEWIKTYIDRN
Sbjct: 343 AMINGYLHVNRFKEALELFRNMQVTNVQPDEFTMVSILNACAHLGALELGEWIKTYIDRN 402
Query: 372 KVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMF 431
K+NNDAFVRNALIDMYFKCGNVDKA++VF EM +RDKFTWTAMIVGLAVNGHGEKALDMF
Sbjct: 403 KINNDAFVRNALIDMYFKCGNVDKAQRVFKEMNQRDKFTWTAMIVGLAVNGHGEKALDMF 462
Query: 432 SKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLAR 491
SKMLKASI PDE+TYIGVLSACTHTGMVD+G+E+F SMTTQH I+PNI HYGC+VDLLAR
Sbjct: 463 SKMLKASIWPDEVTYIGVLSACTHTGMVDEGREFFRSMTTQHNIEPNIAHYGCLVDLLAR 522
Query: 492 AGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVLM 551
AGRL EAH++V+NMPMKPNSIVWGALLAGCRVH+EADMAEM A QIL+LEPENGA YVL+
Sbjct: 523 AGRLKEAHQVVENMPMKPNSIVWGALLAGCRVHKEADMAEMAANQILQLEPENGAAYVLL 582
Query: 552 CNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKL 611
CNIYA+CKRWNDLRELRQTMMDKGIKKTPGCSL+EMNGTVHEF AGDRSHPQTKEI KL
Sbjct: 583 CNIYAACKRWNDLRELRQTMMDKGIKKTPGCSLIEMNGTVHEFVAGDRSHPQTKEIYVKL 642
Query: 612 DKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNL 671
+KM +DLK AGYSPDISEVF+DIAEEDKEN VFRHSEKLA+AFGL+N +PG TIRIVKNL
Sbjct: 643 EKMTQDLKLAGYSPDISEVFLDIAEEDKENAVFRHSEKLAIAFGLVNSQPGFTIRIVKNL 702
Query: 672 RMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RMCMDCH+M K+VS++Y REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 703 RMCMDCHSMAKLVSEVYTREVIVRDRTRFHHFKHGLCSCKDYW 745
BLAST of Sed0007459 vs. NCBI nr
Match:
XP_031744195.1 (putative pentatricopeptide repeat-containing protein At3g15930 [Cucumis sativus] >XP_031744196.1 putative pentatricopeptide repeat-containing protein At3g15930 [Cucumis sativus] >XP_031744197.1 putative pentatricopeptide repeat-containing protein At3g15930 [Cucumis sativus])
HSP 1 Score: 1242.6 bits (3214), Expect = 0.0e+00
Identity = 587/709 (82.79%), Postives = 647/709 (91.26%), Query Frame = 0
Query: 6 SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYL 65
S HPLISL++TC+SM QL Q+HC+AIK GL NP+LQN+V+ FC THE+GD +YA L
Sbjct: 36 SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 95
Query: 66 FDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAM 125
FDEIPEPN+FIWNTMIRGYSRLD+PQ GVSLYLEMLRR V+PD YT+PFLFKGFTRDIA+
Sbjct: 96 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 155
Query: 126 EYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAY 185
EYGR+LHGHVLK GLQ NVFV TALVQMYL CG +D ARGVFD C KADVITWNM+ISAY
Sbjct: 156 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY 215
Query: 186 NKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNL 245
NKVGKFEESRRLFL ME+KQVLPTT+TL+L+LSACSKLKDL+ GK+V SYVKN VESNL
Sbjct: 216 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275
Query: 246 ILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEK 305
+LENA++DMYA C EMDSALGIFRSMN RDIISWTTIVSGFTNL EIDVARNYFD+MPEK
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 306 DHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIK 365
D+VSWTAMIDGY+R NRFKEAL LFRNMQ TNVKPDEFTMVS+LTACAHLG LELGEWI+
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 366 TYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGE 425
TYIDRNK+ ND FVRNALIDMYFKCG+VDKAE +F EM +RDKFTWTAMIVGLAVNGHGE
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 426 KALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCM 485
KALDMFS MLKASI PDEITYIGVLSACTHTG+VDKG++YFL MT+QH I+PNI HYGC+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 486 VDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENG 545
VDLLARAGRL EA+E+++NMP+K NSIVWGALLAGCRV+RE+DMAEMV KQILELEP+NG
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 575
Query: 546 AVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTK 605
AVYVL+CNIYA+CKRWNDLRELRQ MMDKGIKKTPGCSL+EMNG VHEF AGDRSHPQTK
Sbjct: 576 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTK 635
Query: 606 EIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTI 665
ID+KLDKM +DLK AGYSPDISEVF+DIAEEDKEN VFRHSEKLA+AFGLIN PGVTI
Sbjct: 636 NIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTI 695
Query: 666 RIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RI KNLRMCMDCHNM K+VSK+Y+REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 696 RITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
BLAST of Sed0007459 vs. NCBI nr
Match:
XP_022991386.1 (putative pentatricopeptide repeat-containing protein At3g15930 [Cucurbita maxima])
HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 592/721 (82.11%), Postives = 653/721 (90.57%), Query Frame = 0
Query: 1 MATIA-------SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCST 60
MATIA S HPLISL++ C+SM QL QIHCRAIK+GL NP+LQN+V+AFC T
Sbjct: 8 MATIACTASKPLSSTTHPLISLLEICESMDQLQQIHCRAIKTGLAANPVLQNRVMAFCCT 67
Query: 61 HEHGDMKYAHYLFDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYP 120
HE GD+KYA +LFDE+PEPN+FIWNTMIRGYSRLD P+ GVSLYLEMLRR V+PD Y++P
Sbjct: 68 HECGDLKYARHLFDEMPEPNLFIWNTMIRGYSRLDSPELGVSLYLEMLRRGVKPDNYSFP 127
Query: 121 FLFKGFTRDIAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKA 180
FLFKGFTRDIA++ GRELHGHVLK GL SNVFV TALVQMYL CGL+D ARGV DA SKA
Sbjct: 128 FLFKGFTRDIALQCGRELHGHVLKHGLLSNVFVHTALVQMYLLCGLLDTARGVLDAGSKA 187
Query: 181 DVITWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQ 240
DVI WNMMI+AYNKVGKFEESRRLFL MEEKQVLPTT+TL+LILSACSKLKD K GK V
Sbjct: 188 DVIAWNMMIAAYNKVGKFEESRRLFLGMEEKQVLPTTVTLVLILSACSKLKDFKTGKHVH 247
Query: 241 SYVKNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEID 300
S V N VESNL+LENAL+DMYA C EMDSALGIFR+MN +DIISWTTIVSGFTNL EID
Sbjct: 248 SCVNNCKVESNLVLENALIDMYAACGEMDSALGIFRNMNNKDIISWTTIVSGFTNLGEID 307
Query: 301 VARNYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACA 360
VARNYFD+MPEKD VSWTAMIDGYL NRFKEA LFR+MQ T+VKPDEFTMVSILTACA
Sbjct: 308 VARNYFDQMPEKDCVSWTAMIDGYLHTNRFKEAFDLFRHMQATSVKPDEFTMVSILTACA 367
Query: 361 HLGTLELGEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTA 420
LG LELGEWIKTYID+NK+NNDAFVRNALIDMYFKCGNVDKAE+VF EM +RDKFTWT
Sbjct: 368 QLGALELGEWIKTYIDKNKINNDAFVRNALIDMYFKCGNVDKAERVFREMHQRDKFTWTT 427
Query: 421 MIVGLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQH 480
+IVGLAVNGHGEKALD+FSKML+ASI PD++TYIGVLSACTHTGMVDKG+E+FLSMTTQH
Sbjct: 428 IIVGLAVNGHGEKALDIFSKMLEASILPDDVTYIGVLSACTHTGMVDKGREFFLSMTTQH 487
Query: 481 KIKPNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMV 540
I+PNITHYGC+VDLLARAGRL EAHE++KNMP++PNSIVWGALLAGCRVHREA+MAEMV
Sbjct: 488 GIEPNITHYGCLVDLLARAGRLKEAHEVIKNMPIEPNSIVWGALLAGCRVHREANMAEMV 547
Query: 541 AKQILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHE 600
AKQILELEPENGAVYVL+CNIYA+CKRWNDLR+LRQ MMDKGIKK PGCSL+EMNGTVHE
Sbjct: 548 AKQILELEPENGAVYVLLCNIYAACKRWNDLRDLRQMMMDKGIKKIPGCSLIEMNGTVHE 607
Query: 601 FAAGDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMA 660
F AGDRSHPQTKEID KL+KM +DLKFAGYSPDIS+VF+DIAEEDKEN VFRHSEKLA+A
Sbjct: 608 FVAGDRSHPQTKEIDVKLEKMTQDLKFAGYSPDISKVFLDIAEEDKENSVFRHSEKLAIA 667
Query: 661 FGLINLEPGVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGY 715
FGLIN PGVTIRIVKNLRMC+DCH++ K++SK+YDREVIVRDRTRFHHFKHGLCSCK Y
Sbjct: 668 FGLINSPPGVTIRIVKNLRMCLDCHSVAKLISKVYDREVIVRDRTRFHHFKHGLCSCKDY 727
BLAST of Sed0007459 vs. NCBI nr
Match:
XP_038896377.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930 [Benincasa hispida])
HSP 1 Score: 1233.4 bits (3190), Expect = 0.0e+00
Identity = 588/709 (82.93%), Postives = 645/709 (90.97%), Query Frame = 0
Query: 6 SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYL 65
S HP+ISL+QTCKSM QL QIHC+AIK+GL NP+LQN++++FC THE GD+KYAH+L
Sbjct: 72 SPSTHPVISLVQTCKSMDQLQQIHCQAIKTGLNANPVLQNRLMSFCCTHECGDLKYAHHL 131
Query: 66 FDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAM 125
FDEIPEPN+FIWNTMIRGYSRLD PQ GVSLY+EMLRR PD YT+PFLFKGFTRDIA+
Sbjct: 132 FDEIPEPNLFIWNTMIRGYSRLDSPQLGVSLYVEMLRRGFEPDRYTFPFLFKGFTRDIAL 191
Query: 126 EYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAY 185
EYGRELHGHVLK GLQSNVFV TALVQMYL CG +D ARGVFD SKADVI WNMMISAY
Sbjct: 192 EYGRELHGHVLKHGLQSNVFVHTALVQMYLLCGQLDTARGVFDVFSKADVIAWNMMISAY 251
Query: 186 NKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNL 245
K G+FEES RLFL MEEK+VLPTT+TL+LILSACSKLKDLK GKQV SYVKN VESNL
Sbjct: 252 KKAGEFEESIRLFLGMEEKKVLPTTVTLVLILSACSKLKDLKTGKQVDSYVKNCKVESNL 311
Query: 246 ILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEK 305
+LENAL+DMYA C EMD+AL IFRSMN RDIISWTTIVSGFTN+ EIDVARNYFD+MPEK
Sbjct: 312 VLENALIDMYAACGEMDAALEIFRSMNDRDIISWTTIVSGFTNMGEIDVARNYFDKMPEK 371
Query: 306 DHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIK 365
D+VSWTAMIDGY+R+NRFKEAL LFRNMQ TNVKPDEFTMVSILTACAHLG LELGEWI+
Sbjct: 372 DYVSWTAMIDGYIRLNRFKEALELFRNMQATNVKPDEFTMVSILTACAHLGALELGEWIR 431
Query: 366 TYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGE 425
TYIDRNK+NND FVRNALIDMYFKCGNV+KAE +F EM +RDKFTWTAMIVGLAVNG GE
Sbjct: 432 TYIDRNKINNDTFVRNALIDMYFKCGNVEKAESIFREMCQRDKFTWTAMIVGLAVNGRGE 491
Query: 426 KALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCM 485
KALDMFS+MLKASI PDEITYIGVLSACTHTGMVDKG+EYFLSMTTQH I+PNI HYGC+
Sbjct: 492 KALDMFSEMLKASIMPDEITYIGVLSACTHTGMVDKGREYFLSMTTQHGIEPNIAHYGCL 551
Query: 486 VDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENG 545
VDLLARAG L EAHE+++NMPMKPNSIV G LL GCRV+REA+MAEMV KQILELEPENG
Sbjct: 552 VDLLARAGHLKEAHEVIENMPMKPNSIVLGGLLGGCRVYREANMAEMVVKQILELEPENG 611
Query: 546 AVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTK 605
AVYVL+CNIYA+CKRWN+LRELRQ MMDKGIKKTPGCSL+EMNGTVHEF AGDRSHPQTK
Sbjct: 612 AVYVLLCNIYAACKRWNELRELRQMMMDKGIKKTPGCSLIEMNGTVHEFVAGDRSHPQTK 671
Query: 606 EIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTI 665
+ID+KLDKM ++LK AGYSPDISEVF+DIAEEDKEN VFRHSEKLA+AFGLIN GVTI
Sbjct: 672 QIDAKLDKMTQELKSAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPSGVTI 731
Query: 666 RIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
R+VKNLRMC DCHNM K+VSK+++REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 732 RVVKNLRMCTDCHNMAKLVSKVHNREVIVRDRTRFHHFKHGLCSCKEYW 780
BLAST of Sed0007459 vs. NCBI nr
Match:
KAA0058740.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK10534.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 582/709 (82.09%), Postives = 647/709 (91.26%), Query Frame = 0
Query: 6 SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYL 65
S PLI L++TCKSM QL Q+HC+AIK+GL NP+LQN+V++FC T ++GD +YA +L
Sbjct: 36 SPPTRPLIYLLETCKSMDQLQQVHCQAIKTGLNANPVLQNRVMSFCCTDDYGDFQYARHL 95
Query: 66 FDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAM 125
FDEIPEPN+FIWNTMIRGYSRLD+PQ GVSLYLEMLRR V+PD YT+PFLFKGFTRDIA+
Sbjct: 96 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 155
Query: 126 EYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAY 185
EYGR+LHGHVLK GLQ+NVFV TALVQMYL CG +D ARGV D CSKADVITWNM+ISAY
Sbjct: 156 EYGRQLHGHVLKHGLQNNVFVHTALVQMYLLCGQLDTARGVLDVCSKADVITWNMIISAY 215
Query: 186 NKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNL 245
NKVGKFEESRRLFL ME KQVL TT+TL+L+LSACSKLKDL+ GK+V SYVKN VESNL
Sbjct: 216 NKVGKFEESRRLFLVMENKQVLATTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275
Query: 246 ILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEK 305
+LENAL+DMYA C EMDSALGIFRSMN RDIISWTTIVSGFTNL EIDVARNYFD+MPEK
Sbjct: 276 VLENALIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 306 DHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIK 365
D+VSWTAMIDGY+R NRFKEAL LFRNMQ TNVKPDEFTMVS+LTACAHLG LELGEWI+
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 366 TYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGE 425
TYI+RNK+NND FVRNALIDMYFKCG+VDKAE++F EM +RDKFTWTAMIVGLAVNGHGE
Sbjct: 396 TYINRNKINNDLFVRNALIDMYFKCGDVDKAERIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 426 KALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCM 485
KALDMFS MLKASI PDEITYIGVLSACTHTG+VDKG++YFL MT+QH I+PNI HYGC+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 486 VDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENG 545
VDLLARAGRL EA++++KNMP+K NSIVWGALLAGCRV+READMAEMV K ILELEP+NG
Sbjct: 516 VDLLARAGRLKEAYDVIKNMPIKANSIVWGALLAGCRVYREADMAEMVVKHILELEPDNG 575
Query: 546 AVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTK 605
AVYVL+CNIYA+CKRWN+LRELRQ MMDKGIKKTPGCSL+EMNG VHEF AGDRSHPQTK
Sbjct: 576 AVYVLLCNIYAACKRWNELRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTK 635
Query: 606 EIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTI 665
ID+KLDKM +DLK AGYSPDISEVF+D+AEEDKEN VFRHSEKLA+AFGLIN PGVTI
Sbjct: 636 NIDAKLDKMTQDLKLAGYSPDISEVFLDVAEEDKENSVFRHSEKLAIAFGLINSPPGVTI 695
Query: 666 RIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RI KNLRMCMDCHNM K+VSK+Y+REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 696 RITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
BLAST of Sed0007459 vs. ExPASy Swiss-Prot
Match:
Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 745.3 bits (1923), Expect = 6.2e-214
Identity = 350/640 (54.69%), Postives = 468/640 (73.12%), Query Frame = 0
Query: 1 MATIA---SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHG 60
M+TI S + IS++ CK+ Q Q+H ++I G+ NP Q K+ F + G
Sbjct: 23 MSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGG 82
Query: 61 DMKYAHYLFDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFK 120
+ YA+ LF +IPEP+V +WN MI+G+S++D GV LYL ML+ V PD +T+PFL
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 121 GFTRD-IAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVI 180
G RD A+ G++LH HV+K GL SN++VQ ALV+MY CGL+D+ARGVFD K DV
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 181 TWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYV 240
+WN+MIS YN++ ++EES L ++ME V PT++TL+L+LSACSK+KD + K+V YV
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 241 KNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVAR 300
E +L LENAL++ YA C EMD A+ IFRSM RD+ISWT+IV G+ + +AR
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 301 NYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLG 360
YFD+MP +D +SWT MIDGYLR F E+L +FR MQ + PDEFTMVS+LTACAHLG
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 361 TLELGEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIV 420
+LE+GEWIKTYID+NK+ ND V NALIDMYFKCG +KA+KVF +M +RDKFTWTAM+V
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 421 GLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIK 480
GLA NG G++A+ +F +M SI PD+ITY+GVLSAC H+GMVD+ +++F M + H+I+
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 481 PNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQ 540
P++ HYGCMVD+L RAG + EA+E+++ MPM PNSIVWGALL R+H + MAE+ AK+
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 541 ILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAA 600
ILELEP+NGAVY L+CNIYA CKRW DLRE+R+ ++D IKKTPG SL+E+NG HEF A
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 601 GDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAE 637
GD+SH Q++EI KL+++ ++ FA Y PD SE+ + +
Sbjct: 623 GDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
BLAST of Sed0007459 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 639.0 bits (1647), Expect = 6.2e-182
Identity = 297/705 (42.13%), Postives = 467/705 (66.24%), Query Frame = 0
Query: 13 ISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPEP 72
ISLI+ C S++QL Q H I++G ++P +K+ A + ++YA +FDEIP+P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 73 NVFIWNTMIRGYSRLDYPQHGVSLYLEML-RRDVRPDCYTYPFLFKGFTRDIAMEYGREL 132
N F WNT+IR Y+ P + +L+M+ P+ YT+PFL K ++ G+ L
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 133 HGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKF 192
HG +K + S+VFV +L+ Y SCG +D A VF + DV++WN MI+ + + G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 193 EESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENAL 252
+++ LF ME + V + +T++ +LSAC+K+++L+ G+QV SY++ V NL L NA+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 253 MDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWT 312
+DMY C ++ A +F +M ++D ++WTT++ G+ E+ + AR + MP+KD V+W
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 313 AMIDGYLRVNRFKEALVLFRNMQ-ETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDR 372
A+I Y + + EAL++F +Q + N+K ++ T+VS L+ACA +G LELG WI +YI +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 373 NKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDM 432
+ + + V +ALI MY KCG+++K+ +VF+ + KRD F W+AMI GLA++G G +A+DM
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 433 FSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLA 492
F KM +A++ P+ +T+ V AC+HTG+VD+ + F M + + I P HY C+VD+L
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 493 RAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVL 552
R+G L +A + ++ MP+ P++ VWGALL C++H ++AEM ++LELEP N +VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573
Query: 553 MCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSK 612
+ NIYA +W ++ ELR+ M G+KK PGCS +E++G +HEF +GD +HP ++++ K
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 613 LDKMIEDLKFAGYSPDISEVFIDIAEED-KENLVFRHSEKLAMAFGLINLEPGVTIRIVK 672
L +++E LK GY P+IS+V I EE+ KE + HSEKLA+ +GLI+ E IR++K
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693
Query: 673 NLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
NLR+C DCH++ K++S+LYDRE+IVRDR RFHHF++G CSC +W
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0007459 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 623.6 bits (1607), Expect = 2.7e-177
Identity = 296/739 (40.05%), Postives = 455/739 (61.57%), Query Frame = 0
Query: 10 HPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGD-MKYAHYLFDE 69
HP +SL+ CK+++ L IH + IK GL +K+I FC H + + YA +F
Sbjct: 34 HPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 70 IPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAMEYG 129
I EPN+ IWNTM RG++ P + LY+ M+ + P+ YT+PF+ K + A + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 130 RELHGHVLKLGLQSNVFVQTALVQMYL-------------------------------SC 189
+++HGHVLKLG +++V T+L+ MY+ S
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 190 GLIDIARGVFDACSKADVITWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILIL 249
G I+ A+ +FD DV++WN MIS Y + G ++E+ LF DM + V P T++ ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 250 SACSKLKDLKIGKQVQSYVKNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDII 309
SAC++ +++G+QV ++ + SNL + NAL+D+Y+ C E+++A G+F + +D+I
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 310 SWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETN 369
SW T++ G+T++ N +KEAL+LF+ M +
Sbjct: 334 SWNTLIGGYTHM-------------------------------NLYKEALLLFQEMLRSG 393
Query: 370 VKPDEFTMVSILTACAHLGTLELGEWIKTYIDR--NKVNNDAFVRNALIDMYFKCGNVDK 429
P++ TM+SIL ACAHLG +++G WI YID+ V N + +R +LIDMY KCG+++
Sbjct: 394 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 453
Query: 430 AEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTH 489
A +VF+ + + +W AMI G A++G + + D+FS+M K I PD+IT++G+LSAC+H
Sbjct: 454 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 513
Query: 490 TGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWG 549
+GM+D G+ F +MT +K+ P + HYGCM+DLL +G EA EM+ M M+P+ ++W
Sbjct: 514 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWC 573
Query: 550 ALLAGCRVHREADMAEMVAKQILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKG 609
+LL C++H ++ E A+ ++++EPEN YVL+ NIYAS RWN++ + R + DKG
Sbjct: 574 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 633
Query: 610 IKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIA 669
+KK PGCS +E++ VHEF GD+ HP+ +EI L++M L+ AG+ PD SEV ++
Sbjct: 634 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEME 693
Query: 670 EEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVR 715
EE KE + HSEKLA+AFGLI+ +PG + IVKNLR+C +CH TK++SK+Y RE+I R
Sbjct: 694 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 741
BLAST of Sed0007459 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 574.3 bits (1479), Expect = 1.9e-162
Identity = 284/721 (39.39%), Postives = 446/721 (61.86%), Query Frame = 0
Query: 4 IASKEIHPLISLIQTCKSMKQLHQIHCRAIKSGL--ETNPILQNKVIAFCSTHEHGDMKY 63
IAS + ++ + CKS+ + Q+H +++ + + N L N ++ S ++ Y
Sbjct: 7 IASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSY 66
Query: 64 AHYLFDEIPE-PNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFT 123
A +F IP P ++N +R SR P+ + Y + R D +++ + K +
Sbjct: 67 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 126
Query: 124 RDIAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNM 183
+ A+ G ELHG K+ + FV+T + MY SCG I+ AR VFD S DV+TWN
Sbjct: 127 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 186
Query: 184 MISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFT 243
MI Y + G +E+ +LF +M++ V+P + L I+SAC + +++ + + ++
Sbjct: 187 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 246
Query: 244 VESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFD 303
V + L AL+ MYA MD A FR M+ R++ T +VSG++ +D A+ FD
Sbjct: 247 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 306
Query: 304 EMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLEL 363
+ +KD V WT MI Y+ + +EAL +F M + +KPD +M S+++ACA+LG L+
Sbjct: 307 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 366
Query: 364 GEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAV 423
+W+ + I N + ++ + NALI+MY KCG +D VF +M +R+ +W++MI L++
Sbjct: 367 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 426
Query: 424 NGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNIT 483
+G AL +F++M + ++ P+E+T++GVL C+H+G+V++G++ F SMT ++ I P +
Sbjct: 427 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 486
Query: 484 HYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILEL 543
HYGCMVDL RA L EA E++++MP+ N ++WG+L++ CR+H E ++ + AK+ILEL
Sbjct: 487 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 546
Query: 544 EPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRS 603
EP++ VLM NIYA +RW D+R +R+ M +K + K G S ++ NG HEF GD+
Sbjct: 547 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 606
Query: 604 HPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLE 663
H Q+ EI +KLD+++ LK AGY PD V +D+ EE+K++LV HSEKLA+ FGL+N E
Sbjct: 607 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 666
Query: 664 P-------GVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGY 715
GV IRIVKNLR+C DCH K+VSK+Y+RE+IVRDRTRFH +K+GLCSC+ Y
Sbjct: 667 KEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 722
BLAST of Sed0007459 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 572.0 bits (1473), Expect = 9.4e-162
Identity = 272/690 (39.42%), Postives = 429/690 (62.17%), Query Frame = 0
Query: 27 QIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPEPNVFIWNTMIRGYSR 86
QIH +K G + +QN ++ F + E G++ A +FDE+ E NV W +MI GY+R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYAR 214
Query: 87 LDYPQHGVSLYLEMLR-RDVRPDCYTYPFLFKGFTRDIAMEYGRELHGHVLKLGLQSNVF 146
D+ + V L+ M+R +V P+ T + + +E G +++ + G++ N
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274
Query: 147 VQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKFEESRRLFLDMEEKQ 206
+ +ALV MY+ C ID+A+ +FD +++ N M S Y + G E+ +F M +
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334
Query: 207 VLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENALMDMYATCEEMDSAL 266
V P I+++ +S+CS+L+++ GK YV ES + NAL+DMY C D+A
Sbjct: 335 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 394
Query: 267 GIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWTAMIDGYLRVNRFKE 326
IF M+ + +++W +IV+G+ E+D A F+ MPEK+ VSW +I G ++ + F+E
Sbjct: 395 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 454
Query: 327 ALVLFRNMQ-ETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDRNKVNNDAFVRNALI 386
A+ +F +MQ + V D TM+SI +AC HLG L+L +WI YI++N + D + L+
Sbjct: 455 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 514
Query: 387 DMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMFSKMLKASISPDEI 446
DM+ +CG+ + A +F+ + RD WTA I +A+ G+ E+A+++F M++ + PD +
Sbjct: 515 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 574
Query: 447 TYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLARAGRLNEAHEMVKN 506
++G L+AC+H G+V +G+E F SM H + P HYGCMVDLL RAG L EA +++++
Sbjct: 575 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 634
Query: 507 MPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVLMCNIYASCKRWNDL 566
MPM+PN ++W +LLA CRV +MA A++I L PE YVL+ N+YAS RWND+
Sbjct: 635 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 694
Query: 567 RELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKLDKMIEDLKFAGYS 626
++R +M +KG++K PG S +++ G HEF +GD SHP+ I++ LD++ + G+
Sbjct: 695 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 754
Query: 627 PDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNLRMCMDCHNMTKIV 686
PD+S V +D+ E++K ++ RHSEKLAMA+GLI+ G TIRIVKNLR+C DCH+ K
Sbjct: 755 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 814
Query: 687 SKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
SK+Y+RE+I+RD RFH+ + G CSC +W
Sbjct: 815 SKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
BLAST of Sed0007459 vs. ExPASy TrEMBL
Match:
A0A6J1CV36 (putative pentatricopeptide repeat-containing protein At3g15930 OS=Momordica charantia OX=3673 GN=LOC111014845 PE=3 SV=1)
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 587/703 (83.50%), Postives = 648/703 (92.18%), Query Frame = 0
Query: 12 LISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPE 71
L+ L+QTCKSM QL QIHC+AIK+GL NP+LQN V+ FC THEHGD+KYAH+LFDEIPE
Sbjct: 43 LLYLLQTCKSMDQLQQIHCQAIKTGLHANPVLQNGVMTFCCTHEHGDLKYAHHLFDEIPE 102
Query: 72 PNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAMEYGREL 131
PNVF+WNTMIRGYSRLD P+ GVSLYLEMLRRDV+PD YT+PFLFKGFTRDIA+EYG+E
Sbjct: 103 PNVFLWNTMIRGYSRLDSPELGVSLYLEMLRRDVKPDGYTFPFLFKGFTRDIALEYGKEF 162
Query: 132 HGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKF 191
HGHVLK GLQSNVFVQTALVQMYL CGL+D+ARGV D+CSKADVITWNMMISAYNK GKF
Sbjct: 163 HGHVLKHGLQSNVFVQTALVQMYLLCGLVDMARGVLDSCSKADVITWNMMISAYNKDGKF 222
Query: 192 EESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENAL 251
EESR+LFL M+EKQVLPTT+TL+LILSACSKLKDLK GK V YV N VE +LILENAL
Sbjct: 223 EESRKLFLGMQEKQVLPTTVTLVLILSACSKLKDLKTGKLVHRYVNNCQVECSLILENAL 282
Query: 252 MDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWT 311
+DMYA C EMD+ALGIFR+M+ RDIISWT++V+GFTNL EIDVARNYFD+MPEKD+VSWT
Sbjct: 283 IDMYAACGEMDAALGIFRNMSNRDIISWTSVVAGFTNLGEIDVARNYFDKMPEKDYVSWT 342
Query: 312 AMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDRN 371
AMI+GYL VNRFKEAL LFRNMQ TNV+PDEFTMVSIL ACAHLG LELGEWIKTYIDRN
Sbjct: 343 AMINGYLHVNRFKEALELFRNMQVTNVQPDEFTMVSILNACAHLGALELGEWIKTYIDRN 402
Query: 372 KVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMF 431
K+NNDAFVRNALIDMYFKCGNVDKA++VF EM +RDKFTWTAMIVGLAVNGHGEKALDMF
Sbjct: 403 KINNDAFVRNALIDMYFKCGNVDKAQRVFKEMNQRDKFTWTAMIVGLAVNGHGEKALDMF 462
Query: 432 SKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLAR 491
SKMLKASI PDE+TYIGVLSACTHTGMVD+G+E+F SMTTQH I+PNI HYGC+VDLLAR
Sbjct: 463 SKMLKASIWPDEVTYIGVLSACTHTGMVDEGREFFRSMTTQHNIEPNIAHYGCLVDLLAR 522
Query: 492 AGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVLM 551
AGRL EAH++V+NMPMKPNSIVWGALLAGCRVH+EADMAEM A QIL+LEPENGA YVL+
Sbjct: 523 AGRLKEAHQVVENMPMKPNSIVWGALLAGCRVHKEADMAEMAANQILQLEPENGAAYVLL 582
Query: 552 CNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKL 611
CNIYA+CKRWNDLRELRQTMMDKGIKKTPGCSL+EMNGTVHEF AGDRSHPQTKEI KL
Sbjct: 583 CNIYAACKRWNDLRELRQTMMDKGIKKTPGCSLIEMNGTVHEFVAGDRSHPQTKEIYVKL 642
Query: 612 DKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNL 671
+KM +DLK AGYSPDISEVF+DIAEEDKEN VFRHSEKLA+AFGL+N +PG TIRIVKNL
Sbjct: 643 EKMTQDLKLAGYSPDISEVFLDIAEEDKENAVFRHSEKLAIAFGLVNSQPGFTIRIVKNL 702
Query: 672 RMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RMCMDCH+M K+VS++Y REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 703 RMCMDCHSMAKLVSEVYTREVIVRDRTRFHHFKHGLCSCKDYW 745
BLAST of Sed0007459 vs. ExPASy TrEMBL
Match:
A0A6J1JQK8 (putative pentatricopeptide repeat-containing protein At3g15930 OS=Cucurbita maxima OX=3661 GN=LOC111488039 PE=3 SV=1)
HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 592/721 (82.11%), Postives = 653/721 (90.57%), Query Frame = 0
Query: 1 MATIA-------SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCST 60
MATIA S HPLISL++ C+SM QL QIHCRAIK+GL NP+LQN+V+AFC T
Sbjct: 8 MATIACTASKPLSSTTHPLISLLEICESMDQLQQIHCRAIKTGLAANPVLQNRVMAFCCT 67
Query: 61 HEHGDMKYAHYLFDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYP 120
HE GD+KYA +LFDE+PEPN+FIWNTMIRGYSRLD P+ GVSLYLEMLRR V+PD Y++P
Sbjct: 68 HECGDLKYARHLFDEMPEPNLFIWNTMIRGYSRLDSPELGVSLYLEMLRRGVKPDNYSFP 127
Query: 121 FLFKGFTRDIAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKA 180
FLFKGFTRDIA++ GRELHGHVLK GL SNVFV TALVQMYL CGL+D ARGV DA SKA
Sbjct: 128 FLFKGFTRDIALQCGRELHGHVLKHGLLSNVFVHTALVQMYLLCGLLDTARGVLDAGSKA 187
Query: 181 DVITWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQ 240
DVI WNMMI+AYNKVGKFEESRRLFL MEEKQVLPTT+TL+LILSACSKLKD K GK V
Sbjct: 188 DVIAWNMMIAAYNKVGKFEESRRLFLGMEEKQVLPTTVTLVLILSACSKLKDFKTGKHVH 247
Query: 241 SYVKNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEID 300
S V N VESNL+LENAL+DMYA C EMDSALGIFR+MN +DIISWTTIVSGFTNL EID
Sbjct: 248 SCVNNCKVESNLVLENALIDMYAACGEMDSALGIFRNMNNKDIISWTTIVSGFTNLGEID 307
Query: 301 VARNYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACA 360
VARNYFD+MPEKD VSWTAMIDGYL NRFKEA LFR+MQ T+VKPDEFTMVSILTACA
Sbjct: 308 VARNYFDQMPEKDCVSWTAMIDGYLHTNRFKEAFDLFRHMQATSVKPDEFTMVSILTACA 367
Query: 361 HLGTLELGEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTA 420
LG LELGEWIKTYID+NK+NNDAFVRNALIDMYFKCGNVDKAE+VF EM +RDKFTWT
Sbjct: 368 QLGALELGEWIKTYIDKNKINNDAFVRNALIDMYFKCGNVDKAERVFREMHQRDKFTWTT 427
Query: 421 MIVGLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQH 480
+IVGLAVNGHGEKALD+FSKML+ASI PD++TYIGVLSACTHTGMVDKG+E+FLSMTTQH
Sbjct: 428 IIVGLAVNGHGEKALDIFSKMLEASILPDDVTYIGVLSACTHTGMVDKGREFFLSMTTQH 487
Query: 481 KIKPNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMV 540
I+PNITHYGC+VDLLARAGRL EAHE++KNMP++PNSIVWGALLAGCRVHREA+MAEMV
Sbjct: 488 GIEPNITHYGCLVDLLARAGRLKEAHEVIKNMPIEPNSIVWGALLAGCRVHREANMAEMV 547
Query: 541 AKQILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHE 600
AKQILELEPENGAVYVL+CNIYA+CKRWNDLR+LRQ MMDKGIKK PGCSL+EMNGTVHE
Sbjct: 548 AKQILELEPENGAVYVLLCNIYAACKRWNDLRDLRQMMMDKGIKKIPGCSLIEMNGTVHE 607
Query: 601 FAAGDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMA 660
F AGDRSHPQTKEID KL+KM +DLKFAGYSPDIS+VF+DIAEEDKEN VFRHSEKLA+A
Sbjct: 608 FVAGDRSHPQTKEIDVKLEKMTQDLKFAGYSPDISKVFLDIAEEDKENSVFRHSEKLAIA 667
Query: 661 FGLINLEPGVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGY 715
FGLIN PGVTIRIVKNLRMC+DCH++ K++SK+YDREVIVRDRTRFHHFKHGLCSCK Y
Sbjct: 668 FGLINSPPGVTIRIVKNLRMCLDCHSVAKLISKVYDREVIVRDRTRFHHFKHGLCSCKDY 727
BLAST of Sed0007459 vs. ExPASy TrEMBL
Match:
A0A5A7UUL4 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001870 PE=3 SV=1)
HSP 1 Score: 1233.0 bits (3189), Expect = 0.0e+00
Identity = 582/709 (82.09%), Postives = 647/709 (91.26%), Query Frame = 0
Query: 6 SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYL 65
S PLI L++TCKSM QL Q+HC+AIK+GL NP+LQN+V++FC T ++GD +YA +L
Sbjct: 36 SPPTRPLIYLLETCKSMDQLQQVHCQAIKTGLNANPVLQNRVMSFCCTDDYGDFQYARHL 95
Query: 66 FDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAM 125
FDEIPEPN+FIWNTMIRGYSRLD+PQ GVSLYLEMLRR V+PD YT+PFLFKGFTRDIA+
Sbjct: 96 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 155
Query: 126 EYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAY 185
EYGR+LHGHVLK GLQ+NVFV TALVQMYL CG +D ARGV D CSKADVITWNM+ISAY
Sbjct: 156 EYGRQLHGHVLKHGLQNNVFVHTALVQMYLLCGQLDTARGVLDVCSKADVITWNMIISAY 215
Query: 186 NKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNL 245
NKVGKFEESRRLFL ME KQVL TT+TL+L+LSACSKLKDL+ GK+V SYVKN VESNL
Sbjct: 216 NKVGKFEESRRLFLVMENKQVLATTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 275
Query: 246 ILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEK 305
+LENAL+DMYA C EMDSALGIFRSMN RDIISWTTIVSGFTNL EIDVARNYFD+MPEK
Sbjct: 276 VLENALIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 306 DHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIK 365
D+VSWTAMIDGY+R NRFKEAL LFRNMQ TNVKPDEFTMVS+LTACAHLG LELGEWI+
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 366 TYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGE 425
TYI+RNK+NND FVRNALIDMYFKCG+VDKAE++F EM +RDKFTWTAMIVGLAVNGHGE
Sbjct: 396 TYINRNKINNDLFVRNALIDMYFKCGDVDKAERIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 426 KALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCM 485
KALDMFS MLKASI PDEITYIGVLSACTHTG+VDKG++YFL MT+QH I+PNI HYGC+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 486 VDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENG 545
VDLLARAGRL EA++++KNMP+K NSIVWGALLAGCRV+READMAEMV K ILELEP+NG
Sbjct: 516 VDLLARAGRLKEAYDVIKNMPIKANSIVWGALLAGCRVYREADMAEMVVKHILELEPDNG 575
Query: 546 AVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTK 605
AVYVL+CNIYA+CKRWN+LRELRQ MMDKGIKKTPGCSL+EMNG VHEF AGDRSHPQTK
Sbjct: 576 AVYVLLCNIYAACKRWNELRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTK 635
Query: 606 EIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTI 665
ID+KLDKM +DLK AGYSPDISEVF+D+AEEDKEN VFRHSEKLA+AFGLIN PGVTI
Sbjct: 636 NIDAKLDKMTQDLKLAGYSPDISEVFLDVAEEDKENSVFRHSEKLAIAFGLINSPPGVTI 695
Query: 666 RIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RI KNLRMCMDCHNM K+VSK+Y+REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 696 RITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
BLAST of Sed0007459 vs. ExPASy TrEMBL
Match:
A0A1S3CDK0 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930 OS=Cucumis melo OX=3656 GN=LOC103499814 PE=3 SV=1)
HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 581/709 (81.95%), Postives = 646/709 (91.11%), Query Frame = 0
Query: 6 SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYL 65
S PLI L++TCKSM QL Q+HC+AIK+GL NP+LQN+V++FC T ++GD +YA +L
Sbjct: 48 SPPTRPLIYLLETCKSMDQLQQVHCQAIKTGLNANPVLQNRVMSFCCTDDYGDFQYARHL 107
Query: 66 FDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAM 125
FDEIPEPN+FIWNTMIRGYSRLD+PQ GVSLYLEMLRR V+PD YT+PFLFKGFTRDIA+
Sbjct: 108 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 167
Query: 126 EYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAY 185
EYGR+LHGHVLK GLQ+NVFV TALVQMYL CG +D ARGV D CSKADVITWNM+ISAY
Sbjct: 168 EYGRQLHGHVLKHGLQNNVFVHTALVQMYLLCGQLDTARGVLDVCSKADVITWNMIISAY 227
Query: 186 NKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNL 245
NKVGKFEESRRLFL ME KQVL TT+TL+L+LSACSKLKDL+ GK+V SYVKN VESNL
Sbjct: 228 NKVGKFEESRRLFLVMENKQVLATTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 287
Query: 246 ILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEK 305
+LENAL+DMYA C EMDSALGIFRSMN RDIISWTTIVSGFTNL EIDVARNYFD+MPEK
Sbjct: 288 VLENALIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 347
Query: 306 DHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLELGEWIK 365
D+VSWTAMIDGY+R NRFKEAL LFRNMQ TNVKPDEFTMVS+LTACAHLG LELGEWI+
Sbjct: 348 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 407
Query: 366 TYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGE 425
TYI+RNK+NND FVRNALIDMYFKCG+VDKAE++F EM +RDKFTWTAMIVGLAVNGHGE
Sbjct: 408 TYINRNKINNDLFVRNALIDMYFKCGDVDKAERIFREMSQRDKFTWTAMIVGLAVNGHGE 467
Query: 426 KALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCM 485
KALDMFS MLKASI PDEITYIGVLSACTHTG+VDKG++YFL MT+QH I+PNI HYGC+
Sbjct: 468 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 527
Query: 486 VDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENG 545
VDLLARAGRL EA++++KNMP+K NSIVWGALLAGCRV+READMAEMV K ILELEP+NG
Sbjct: 528 VDLLARAGRLKEAYDVIKNMPIKANSIVWGALLAGCRVYREADMAEMVVKHILELEPDNG 587
Query: 546 AVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTK 605
AVYVL+CNIYA+CKRWN+LRELRQ MMDKGIKK PGCSL+EMNG VHEF AGDRSHPQTK
Sbjct: 588 AVYVLLCNIYAACKRWNELRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTK 647
Query: 606 EIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTI 665
ID+KLDKM +DLK AGYSPDISEVF+D+AEEDKEN VFRHSEKLA+AFGLIN PGVTI
Sbjct: 648 NIDAKLDKMTQDLKLAGYSPDISEVFLDVAEEDKENSVFRHSEKLAIAFGLINSPPGVTI 707
Query: 666 RIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
RI KNLRMCMDCHNM K+VSK+Y+REVIVRDRTRFHHFKHGLCSCK YW
Sbjct: 708 RITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 756
BLAST of Sed0007459 vs. ExPASy TrEMBL
Match:
A0A6J1GRB6 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930 OS=Cucurbita moschata OX=3662 GN=LOC111456329 PE=3 SV=1)
HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 584/721 (81.00%), Postives = 647/721 (89.74%), Query Frame = 0
Query: 1 MATIA-------SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCST 60
MATIA S HPLISL++ C+SM QL QI CRAIK+GL NP+LQN+V+A C T
Sbjct: 1 MATIACTASKPLSSTTHPLISLLEICESMDQLQQIDCRAIKTGLTPNPVLQNRVMAICCT 60
Query: 61 HEHGDMKYAHYLFDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYP 120
+E GD+KYA +LFDE+PEPN+FIWNTMIRGY RLD P+ GVSLYLEMLRR V+PD YT+P
Sbjct: 61 YECGDLKYAPHLFDEMPEPNLFIWNTMIRGYXRLDSPELGVSLYLEMLRRGVKPDNYTFP 120
Query: 121 FLFKGFTRDIAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKA 180
FLFKGFTRDI+++ G ELHGHVLK GL SNVFV TALVQMYL CGL+D+ARGV DA SKA
Sbjct: 121 FLFKGFTRDISLQCGSELHGHVLKHGLLSNVFVHTALVQMYLLCGLLDMARGVLDAGSKA 180
Query: 181 DVITWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQ 240
DVI+WNMMI+AYNKVGK EESRRLFL MEE+QVLPTT+TL+LILSACSKLKD K GK V+
Sbjct: 181 DVISWNMMIAAYNKVGKLEESRRLFLGMEERQVLPTTVTLVLILSACSKLKDFKTGKHVR 240
Query: 241 SYVKNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEID 300
S V N VESNL+LENAL+DMYA C EMDSAL IFR+MN +DIISWTTIVSGFTNL EID
Sbjct: 241 SCVNNCKVESNLVLENALIDMYAACGEMDSALEIFRNMNNKDIISWTTIVSGFTNLGEID 300
Query: 301 VARNYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACA 360
VARNYFD+MPEKD VSWTAMIDGYLR+NRFKEA LFR+MQ +VKPDEFTMVSILTACA
Sbjct: 301 VARNYFDQMPEKDCVSWTAMIDGYLRMNRFKEAFELFRHMQAISVKPDEFTMVSILTACA 360
Query: 361 HLGTLELGEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTA 420
LG LELGEWIKTYIDRNK+NNDAF RNALIDMYFKCGNVDKAE+VF EM +RDKFTWTA
Sbjct: 361 QLGALELGEWIKTYIDRNKINNDAFFRNALIDMYFKCGNVDKAERVFREMHQRDKFTWTA 420
Query: 421 MIVGLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQH 480
MIVGLAVNGHGEKALDMFSKML+ASI PD++TYIGVL+ACTHTGMVDKG+E+FLSMTTQH
Sbjct: 421 MIVGLAVNGHGEKALDMFSKMLEASILPDDVTYIGVLAACTHTGMVDKGREFFLSMTTQH 480
Query: 481 KIKPNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMV 540
I+PNITHYGC+VDLLARAG L EAHE++KNMP++PNSIVWGALLAGCR HREADMAEMV
Sbjct: 481 GIEPNITHYGCLVDLLARAGHLKEAHEVIKNMPIEPNSIVWGALLAGCRAHREADMAEMV 540
Query: 541 AKQILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHE 600
AKQILELEPENGAVYVL+CNIYA+CKRWNDLR+LRQ MMDKGIKK PGCSL+EMNGTVHE
Sbjct: 541 AKQILELEPENGAVYVLLCNIYAACKRWNDLRDLRQMMMDKGIKKIPGCSLIEMNGTVHE 600
Query: 601 FAAGDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMA 660
F AGDRSHPQTKEID KL+KM +DLKFAGYSPD SEVF+DIAEEDKEN VFRHSEKLA+A
Sbjct: 601 FVAGDRSHPQTKEIDVKLEKMTQDLKFAGYSPDTSEVFLDIAEEDKENSVFRHSEKLAIA 660
Query: 661 FGLINLEPGVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGY 715
FGLIN PGVTIRIVKNLRMC+DCH++ K++SK+Y REVIVRDRTRFHHFKHGLCSCK Y
Sbjct: 661 FGLINSPPGVTIRIVKNLRMCLDCHSLAKLISKVYHREVIVRDRTRFHHFKHGLCSCKDY 720
BLAST of Sed0007459 vs. TAIR 10
Match:
AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 745.3 bits (1923), Expect = 4.4e-215
Identity = 350/640 (54.69%), Postives = 468/640 (73.12%), Query Frame = 0
Query: 1 MATIA---SKEIHPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHG 60
M+TI S + IS++ CK+ Q Q+H ++I G+ NP Q K+ F + G
Sbjct: 23 MSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGG 82
Query: 61 DMKYAHYLFDEIPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFK 120
+ YA+ LF +IPEP+V +WN MI+G+S++D GV LYL ML+ V PD +T+PFL
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 121 GFTRD-IAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVI 180
G RD A+ G++LH HV+K GL SN++VQ ALV+MY CGL+D+ARGVFD K DV
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 181 TWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYV 240
+WN+MIS YN++ ++EES L ++ME V PT++TL+L+LSACSK+KD + K+V YV
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 241 KNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVAR 300
E +L LENAL++ YA C EMD A+ IFRSM RD+ISWT+IV G+ + +AR
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 301 NYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLG 360
YFD+MP +D +SWT MIDGYLR F E+L +FR MQ + PDEFTMVS+LTACAHLG
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 361 TLELGEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIV 420
+LE+GEWIKTYID+NK+ ND V NALIDMYFKCG +KA+KVF +M +RDKFTWTAM+V
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 421 GLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIK 480
GLA NG G++A+ +F +M SI PD+ITY+GVLSAC H+GMVD+ +++F M + H+I+
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 481 PNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQ 540
P++ HYGCMVD+L RAG + EA+E+++ MPM PNSIVWGALL R+H + MAE+ AK+
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 541 ILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAA 600
ILELEP+NGAVY L+CNIYA CKRW DLRE+R+ ++D IKKTPG SL+E+NG HEF A
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 601 GDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAE 637
GD+SH Q++EI KL+++ ++ FA Y PD SE+ + +
Sbjct: 623 GDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
BLAST of Sed0007459 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 639.0 bits (1647), Expect = 4.4e-183
Identity = 297/705 (42.13%), Postives = 467/705 (66.24%), Query Frame = 0
Query: 13 ISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPEP 72
ISLI+ C S++QL Q H I++G ++P +K+ A + ++YA +FDEIP+P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 73 NVFIWNTMIRGYSRLDYPQHGVSLYLEML-RRDVRPDCYTYPFLFKGFTRDIAMEYGREL 132
N F WNT+IR Y+ P + +L+M+ P+ YT+PFL K ++ G+ L
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 133 HGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKF 192
HG +K + S+VFV +L+ Y SCG +D A VF + DV++WN MI+ + + G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 193 EESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENAL 252
+++ LF ME + V + +T++ +LSAC+K+++L+ G+QV SY++ V NL L NA+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 253 MDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWT 312
+DMY C ++ A +F +M ++D ++WTT++ G+ E+ + AR + MP+KD V+W
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 313 AMIDGYLRVNRFKEALVLFRNMQ-ETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDR 372
A+I Y + + EAL++F +Q + N+K ++ T+VS L+ACA +G LELG WI +YI +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 373 NKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDM 432
+ + + V +ALI MY KCG+++K+ +VF+ + KRD F W+AMI GLA++G G +A+DM
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 433 FSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLA 492
F KM +A++ P+ +T+ V AC+HTG+VD+ + F M + + I P HY C+VD+L
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 493 RAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVL 552
R+G L +A + ++ MP+ P++ VWGALL C++H ++AEM ++LELEP N +VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573
Query: 553 MCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSK 612
+ NIYA +W ++ ELR+ M G+KK PGCS +E++G +HEF +GD +HP ++++ K
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 613 LDKMIEDLKFAGYSPDISEVFIDIAEED-KENLVFRHSEKLAMAFGLINLEPGVTIRIVK 672
L +++E LK GY P+IS+V I EE+ KE + HSEKLA+ +GLI+ E IR++K
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693
Query: 673 NLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
NLR+C DCH++ K++S+LYDRE+IVRDR RFHHF++G CSC +W
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0007459 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 623.6 bits (1607), Expect = 1.9e-178
Identity = 296/739 (40.05%), Postives = 455/739 (61.57%), Query Frame = 0
Query: 10 HPLISLIQTCKSMKQLHQIHCRAIKSGLETNPILQNKVIAFCSTHEHGD-MKYAHYLFDE 69
HP +SL+ CK+++ L IH + IK GL +K+I FC H + + YA +F
Sbjct: 34 HPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 70 IPEPNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFTRDIAMEYG 129
I EPN+ IWNTM RG++ P + LY+ M+ + P+ YT+PF+ K + A + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 130 RELHGHVLKLGLQSNVFVQTALVQMYL-------------------------------SC 189
+++HGHVLKLG +++V T+L+ MY+ S
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 190 GLIDIARGVFDACSKADVITWNMMISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILIL 249
G I+ A+ +FD DV++WN MIS Y + G ++E+ LF DM + V P T++ ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 250 SACSKLKDLKIGKQVQSYVKNFTVESNLILENALMDMYATCEEMDSALGIFRSMNKRDII 309
SAC++ +++G+QV ++ + SNL + NAL+D+Y+ C E+++A G+F + +D+I
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 310 SWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETN 369
SW T++ G+T++ N +KEAL+LF+ M +
Sbjct: 334 SWNTLIGGYTHM-------------------------------NLYKEALLLFQEMLRSG 393
Query: 370 VKPDEFTMVSILTACAHLGTLELGEWIKTYIDR--NKVNNDAFVRNALIDMYFKCGNVDK 429
P++ TM+SIL ACAHLG +++G WI YID+ V N + +R +LIDMY KCG+++
Sbjct: 394 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 453
Query: 430 AEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMFSKMLKASISPDEITYIGVLSACTH 489
A +VF+ + + +W AMI G A++G + + D+FS+M K I PD+IT++G+LSAC+H
Sbjct: 454 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 513
Query: 490 TGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWG 549
+GM+D G+ F +MT +K+ P + HYGCM+DLL +G EA EM+ M M+P+ ++W
Sbjct: 514 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWC 573
Query: 550 ALLAGCRVHREADMAEMVAKQILELEPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKG 609
+LL C++H ++ E A+ ++++EPEN YVL+ NIYAS RWN++ + R + DKG
Sbjct: 574 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 633
Query: 610 IKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIA 669
+KK PGCS +E++ VHEF GD+ HP+ +EI L++M L+ AG+ PD SEV ++
Sbjct: 634 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEME 693
Query: 670 EEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVR 715
EE KE + HSEKLA+AFGLI+ +PG + IVKNLR+C +CH TK++SK+Y RE+I R
Sbjct: 694 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 741
BLAST of Sed0007459 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 574.3 bits (1479), Expect = 1.3e-163
Identity = 284/721 (39.39%), Postives = 446/721 (61.86%), Query Frame = 0
Query: 4 IASKEIHPLISLIQTCKSMKQLHQIHCRAIKSGL--ETNPILQNKVIAFCSTHEHGDMKY 63
IAS + ++ + CKS+ + Q+H +++ + + N L N ++ S ++ Y
Sbjct: 7 IASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSY 66
Query: 64 AHYLFDEIPE-PNVFIWNTMIRGYSRLDYPQHGVSLYLEMLRRDVRPDCYTYPFLFKGFT 123
A +F IP P ++N +R SR P+ + Y + R D +++ + K +
Sbjct: 67 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 126
Query: 124 RDIAMEYGRELHGHVLKLGLQSNVFVQTALVQMYLSCGLIDIARGVFDACSKADVITWNM 183
+ A+ G ELHG K+ + FV+T + MY SCG I+ AR VFD S DV+TWN
Sbjct: 127 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 186
Query: 184 MISAYNKVGKFEESRRLFLDMEEKQVLPTTITLILILSACSKLKDLKIGKQVQSYVKNFT 243
MI Y + G +E+ +LF +M++ V+P + L I+SAC + +++ + + ++
Sbjct: 187 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 246
Query: 244 VESNLILENALMDMYATCEEMDSALGIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFD 303
V + L AL+ MYA MD A FR M+ R++ T +VSG++ +D A+ FD
Sbjct: 247 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 306
Query: 304 EMPEKDHVSWTAMIDGYLRVNRFKEALVLFRNMQETNVKPDEFTMVSILTACAHLGTLEL 363
+ +KD V WT MI Y+ + +EAL +F M + +KPD +M S+++ACA+LG L+
Sbjct: 307 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 366
Query: 364 GEWIKTYIDRNKVNNDAFVRNALIDMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAV 423
+W+ + I N + ++ + NALI+MY KCG +D VF +M +R+ +W++MI L++
Sbjct: 367 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 426
Query: 424 NGHGEKALDMFSKMLKASISPDEITYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNIT 483
+G AL +F++M + ++ P+E+T++GVL C+H+G+V++G++ F SMT ++ I P +
Sbjct: 427 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 486
Query: 484 HYGCMVDLLARAGRLNEAHEMVKNMPMKPNSIVWGALLAGCRVHREADMAEMVAKQILEL 543
HYGCMVDL RA L EA E++++MP+ N ++WG+L++ CR+H E ++ + AK+ILEL
Sbjct: 487 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 546
Query: 544 EPENGAVYVLMCNIYASCKRWNDLRELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRS 603
EP++ VLM NIYA +RW D+R +R+ M +K + K G S ++ NG HEF GD+
Sbjct: 547 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 606
Query: 604 HPQTKEIDSKLDKMIEDLKFAGYSPDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLE 663
H Q+ EI +KLD+++ LK AGY PD V +D+ EE+K++LV HSEKLA+ FGL+N E
Sbjct: 607 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEE 666
Query: 664 P-------GVTIRIVKNLRMCMDCHNMTKIVSKLYDREVIVRDRTRFHHFKHGLCSCKGY 715
GV IRIVKNLR+C DCH K+VSK+Y+RE+IVRDRTRFH +K+GLCSC+ Y
Sbjct: 667 KEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 722
BLAST of Sed0007459 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 572.0 bits (1473), Expect = 6.7e-163
Identity = 272/690 (39.42%), Postives = 429/690 (62.17%), Query Frame = 0
Query: 27 QIHCRAIKSGLETNPILQNKVIAFCSTHEHGDMKYAHYLFDEIPEPNVFIWNTMIRGYSR 86
QIH +K G + +QN ++ F + E G++ A +FDE+ E NV W +MI GY+R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYAR 214
Query: 87 LDYPQHGVSLYLEMLR-RDVRPDCYTYPFLFKGFTRDIAMEYGRELHGHVLKLGLQSNVF 146
D+ + V L+ M+R +V P+ T + + +E G +++ + G++ N
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274
Query: 147 VQTALVQMYLSCGLIDIARGVFDACSKADVITWNMMISAYNKVGKFEESRRLFLDMEEKQ 206
+ +ALV MY+ C ID+A+ +FD +++ N M S Y + G E+ +F M +
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334
Query: 207 VLPTTITLILILSACSKLKDLKIGKQVQSYVKNFTVESNLILENALMDMYATCEEMDSAL 266
V P I+++ +S+CS+L+++ GK YV ES + NAL+DMY C D+A
Sbjct: 335 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 394
Query: 267 GIFRSMNKRDIISWTTIVSGFTNLEEIDVARNYFDEMPEKDHVSWTAMIDGYLRVNRFKE 326
IF M+ + +++W +IV+G+ E+D A F+ MPEK+ VSW +I G ++ + F+E
Sbjct: 395 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 454
Query: 327 ALVLFRNMQ-ETNVKPDEFTMVSILTACAHLGTLELGEWIKTYIDRNKVNNDAFVRNALI 386
A+ +F +MQ + V D TM+SI +AC HLG L+L +WI YI++N + D + L+
Sbjct: 455 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 514
Query: 387 DMYFKCGNVDKAEKVFSEMRKRDKFTWTAMIVGLAVNGHGEKALDMFSKMLKASISPDEI 446
DM+ +CG+ + A +F+ + RD WTA I +A+ G+ E+A+++F M++ + PD +
Sbjct: 515 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 574
Query: 447 TYIGVLSACTHTGMVDKGQEYFLSMTTQHKIKPNITHYGCMVDLLARAGRLNEAHEMVKN 506
++G L+AC+H G+V +G+E F SM H + P HYGCMVDLL RAG L EA +++++
Sbjct: 575 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 634
Query: 507 MPMKPNSIVWGALLAGCRVHREADMAEMVAKQILELEPENGAVYVLMCNIYASCKRWNDL 566
MPM+PN ++W +LLA CRV +MA A++I L PE YVL+ N+YAS RWND+
Sbjct: 635 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 694
Query: 567 RELRQTMMDKGIKKTPGCSLMEMNGTVHEFAAGDRSHPQTKEIDSKLDKMIEDLKFAGYS 626
++R +M +KG++K PG S +++ G HEF +GD SHP+ I++ LD++ + G+
Sbjct: 695 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 754
Query: 627 PDISEVFIDIAEEDKENLVFRHSEKLAMAFGLINLEPGVTIRIVKNLRMCMDCHNMTKIV 686
PD+S V +D+ E++K ++ RHSEKLAMA+GLI+ G TIRIVKNLR+C DCH+ K
Sbjct: 755 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 814
Query: 687 SKLYDREVIVRDRTRFHHFKHGLCSCKGYW 715
SK+Y+RE+I+RD RFH+ + G CSC +W
Sbjct: 815 SKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022145389.1 | 0.0e+00 | 83.50 | putative pentatricopeptide repeat-containing protein At3g15930 [Momordica charan... | [more] |
XP_031744195.1 | 0.0e+00 | 82.79 | putative pentatricopeptide repeat-containing protein At3g15930 [Cucumis sativus]... | [more] |
XP_022991386.1 | 0.0e+00 | 82.11 | putative pentatricopeptide repeat-containing protein At3g15930 [Cucurbita maxima... | [more] |
XP_038896377.1 | 0.0e+00 | 82.93 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15... | [more] |
KAA0058740.1 | 0.0e+00 | 82.09 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... | [more] |
Match Name | E-value | Identity | Description | |
Q9LSB8 | 6.2e-214 | 54.69 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
O82380 | 6.2e-182 | 42.13 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 2.7e-177 | 40.05 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O23337 | 1.9e-162 | 39.39 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 9.4e-162 | 39.42 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CV36 | 0.0e+00 | 83.50 | putative pentatricopeptide repeat-containing protein At3g15930 OS=Momordica char... | [more] |
A0A6J1JQK8 | 0.0e+00 | 82.11 | putative pentatricopeptide repeat-containing protein At3g15930 OS=Cucurbita maxi... | [more] |
A0A5A7UUL4 | 0.0e+00 | 82.09 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3CDK0 | 0.0e+00 | 81.95 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15... | [more] |
A0A6J1GRB6 | 0.0e+00 | 81.00 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15... | [more] |
Match Name | E-value | Identity | Description | |
AT3G15930.1 | 4.4e-215 | 54.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G29760.1 | 4.4e-183 | 42.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 1.9e-178 | 40.05 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G14820.1 | 1.3e-163 | 39.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22690.2 | 6.7e-163 | 39.42 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |