Sed0007336 (gene) Chayote v1

Overview
NameSed0007336
Typegene
OrganismSechium edule (Chayote v1)
Descriptionsuppressor protein SRP40 isoform X1
LocationLG08: 1503480 .. 1506310 (+)
RNA-Seq ExpressionSed0007336
SyntenySed0007336
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTTCGGACAGCACTACGTGAATCTATATTCTAAGAGGGATTGATTAGAATGTGGTTGTGTTGCGGTTTGGATTAGGCCTTTAGGGTTGTTTTTGTTCTTTCTGATTTGATTTTTTCTTACTGATGTAGAAATGTGAATTGAAATTCACATTTTAAGTGAAACAAAAAAAAGGAATCAAGACATTATGAATTGTTGAACCTCGGATATTTCAGGTTATTAGGCGATGGAATGCATTGTTGTTTCGTAGCAATAGCAATACAAGTGCATTTGTAATTGAAATCTACTGATTTAGAGAAGCTAGTGAAGTGTTATTTCGAATATGTTGCGTGATAGAACATTCCAGCTATAATCGAGTCATAAAGGCCCTCTTTGATAGTCATTTAAGCCTATGTTCAATATCCATTTGATTTTTATTTTTTTGCTTTTGAAATTTAAACCTACAACAACTATGTTACCATATGTTTTATTTTATTTGGATATTTACATATTACGTCTATTTGTAGAAACTAAAGCAAAATTTAGAAACAAAAATAATAATAATAACTTTCAAAAGTTTGTGTCTGTTTTGAAAGTTGGATTGCATTCACATACTTTTTTAAGTAAAAATAAATACATTGTAGGAAAGGTGGAACACATGGTAAGAAATTTGATTAATTATTAACTTGTTCAACTCAACCAAACTCAACCCGAACTAAGGAATAATATGTACTTATATACATGTATGTGAGAGAGAAAAGAGAAATTAATTAATAAGATAGATTCTTAACATATTTGATAAATAACATTCACTAATAAAATATCTAATTTGAGTTGAAGTATAATATAGTCCACCTTTGATTTATTTGTTTGTGCATTTACTGGGTTTGACTAGAATTTTTTTATAGAGAAAAAACGAGATTAATACAAGTTGAGAGAGAGTCTAAACCAACCCAACTCAAAAATATAGGATTGGATTGAGATGAGTTGCTCTAATGCATAGAGTTAGACGGGTTAGAGGATTGACCAACCCGAAACTTTGGGTTGGTCCAAAAAAATTCCCTAACTCAACCTAGCCATGTACACCCCTAGTCCGTTCAAAGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA

mRNA sequence

ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA

Coding sequence (CDS)

ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA

Protein sequence

MESGQKIEAGESNTHPSSQKLSPSLSSAISNPSTDSSFELIVDVPDQFIGGPSDSSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASESSLHDHVIELAKPENDQDTKAMADNVESQKDPESEHKVKLQQSGDASDNLSSNNHRTNSSPGSEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSVSMESGQKIEAGESNTHPSSSTGEVGISTPSKKLSSSLSSSSNTSTDSSFELINVPDQFIGGASDSLKKNELHNAECSDSEFVFVNGDETCPPKADLSSAAKTTRCSLSGTPSSYSESSLHDHGIELSKPDKDAKAMKPDLNKALPGSRLGGTDTVESQKDLQIKDQLQNQPMQPFKRRILTQKEKERNQRFKEMISHLPNEPTTEDYVEVPVDGSEGGEIAVQLGPMQVKEKTMQLPLLVERRKEKGGVTKLYSSNQETTQLPHWSRVGREAISACSLEERTCCIFDRRRSKKNMVFCLLVLIGGQRIGERMLKERISSVQVLQNHWRERKGGKNLGENFGGGDKSSARSDSRRDSNVPLRRQ
Homology
BLAST of Sed0007336 vs. NCBI nr
Match: XP_038880274.1 (uncharacterized serine-rich protein C215.13 [Benincasa hispida])

HSP 1 Score: 163.7 bits (413), Expect = 4.8e-36
Identity = 148/349 (42.41%), Postives = 174/349 (49.86%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEAG S TH             S+KL  SLSSA S+ S+DSSFELIV     FI
Sbjct: 1   MESGQKIEAGGSKTHSISSTGEVGLSIPSKKLVSSLSSA-SDSSSDSSFELIVTGSSGFI 60

Query: 61  GGPSDSSEK----------NEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASES 120
            G SDS +K          +EF F++ DD+ET PP  DL  AAK +  SLSRSSSSASES
Sbjct: 61  DGTSDSLKKDECHVAGHTDSEFEFISSDDIETHPPRADLPRAAKRSSRSLSRSSSSASES 120

Query: 121 SLHDHVIELAKPENDQDTKAM---------------ADNVESQK--------------DP 180
           SLHDHVIEL KP   +DT AM                 +VES+K              + 
Sbjct: 121 SLHDHVIELPKPGKYKDTNAMEPHSNKTLRGPEPGETSHVESRKNLQTCSSTSSSSSSES 180

Query: 181 ESEHKVKLQQSGDASDNLSSNN-------------------------------------H 240
           ESE K+KLQ+ GD + NL   N                                     H
Sbjct: 181 ESERKIKLQKGGDTAGNLLVKNSSSPSKEKDNRLVADLSDDDIPISSMTCNGQSAVTPTH 240

Query: 241 RTNSSPGSEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLF 261
           R +SS GSE  TQYPPTQ+MER  +D TSP YRIPS VFSRTKS +PM+    ASNESLF
Sbjct: 241 RIDSSSGSETPTQYPPTQVMERA-DDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLF 300

BLAST of Sed0007336 vs. NCBI nr
Match: XP_022135339.1 (suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135341.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135342.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135343.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135344.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135345.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135346.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135347.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135349.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135350.1 suppressor protein SRP40 isoform X1 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 5.3e-35
Identity = 138/298 (46.31%), Postives = 170/298 (57.05%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEAGES THP           SS+KL  SLSSA S+ S+DSSFELI++   +F 
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSA-SDSSSDSSFELILNDSSEFP 60

Query: 61  GGPSD----------SSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSR--SSSSAS 120
           GG SD             ++EF F++ DD+ETR    +L SAAK +  SLSR  SSSSAS
Sbjct: 61  GGTSDPLKTKELNVAGHSESEFEFISSDDIETR-SAANLPSAAKTSSRSLSRSSSSSSAS 120

Query: 121 ESSLHDHVIELAKPENDQDTKAM-----------ADNVESQKDPESEHKVKLQQSG---- 180
           ESSL DHVIEL KPE ++D+K M           + +  S  + E++ K+KLQQ G    
Sbjct: 121 ESSLCDHVIELPKPEKNKDSKVMEADLSKSLQTSSSSSSSSSESEAKRKIKLQQGGVSNN 180

Query: 181 --------------DASD------NLSSN-------NHRTNSSPGSEVATQYPPTQLMER 234
                         D SD      +++SN        +R + S GSE ATQYP TQLMER
Sbjct: 181 PSSPSMDKDNRLVEDFSDDDVPISSMASNGQSPAAPTNRIDLSAGSEAATQYPQTQLMER 240

BLAST of Sed0007336 vs. NCBI nr
Match: XP_022135351.1 (uncharacterized protein LOC111007326 isoform X2 [Momordica charantia])

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-34
Identity = 130/265 (49.06%), Postives = 161/265 (60.75%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEAGES THP           SS+KL  SLSSA S+ S+DSSFELI++   +F 
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSA-SDSSSDSSFELILNDSSEFP 60

Query: 61  GGPSD----------SSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSR--SSSSAS 120
           GG SD             ++EF F++ DD+ETR    +L SAAK +  SLSR  SSSSAS
Sbjct: 61  GGTSDPLKTKELNVAGHSESEFEFISSDDIETR-SAANLPSAAKTSSRSLSRSSSSSSAS 120

Query: 121 ESSLHDHVIELAKPENDQDTKAMADNVESQKDPESEHKVKLQQSGD--ASDNLSSN---- 180
           ESSL DHVIEL KPE ++D+K    N  S    + ++++    S D     +++SN    
Sbjct: 121 ESSLCDHVIELPKPEKNKDSKGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSP 180

Query: 181 ---NHRTNSSPGSEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAAS 234
               +R + S GSE ATQYP TQLMERV +D  SP YRIPSHVFSRTKSKS M+    AS
Sbjct: 181 AAPTNRIDLSAGSEAATQYPQTQLMERV-DDPNSPSYRIPSHVFSRTKSKSAMEWS-VAS 240

BLAST of Sed0007336 vs. NCBI nr
Match: XP_011648451.1 (uncharacterized protein LOC105434465 [Cucumis sativus] >KGN63731.1 hypothetical protein Csa_013801 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 2.2e-33
Identity = 152/382 (39.79%), Postives = 190/382 (49.74%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEA ES TH            SS KL+ SLSSA S+ S+DSSFELIV   D  I
Sbjct: 1   MESGQKIEAIESKTHSISSTSGVDHSISSNKLASSLSSA-SDSSSDSSFELIVTGLDGSI 60

Query: 61  GGPSDSSEKNE----------FVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASES 120
           G  SDS +K+E          FVF+  DD+ T  P TDL   AK    SLSRSSSS+SES
Sbjct: 61  GVASDSLKKDELHVVGRSDSGFVFITSDDVGTHSPKTDLPGTAKIPSQSLSRSSSSSSES 120

Query: 121 SLHDHVIELAKPENDQDTKAM-------ADNVESQK------------DPESEHKVKLQQ 180
           SLHDHVIEL KP      K +        +NVES+K              ESE K KLQ+
Sbjct: 121 SLHDHVIELPKPVEPDSKKRLPGLKHGETNNVESRKSIQTCSSTSSSSSSESESKHKLQK 180

Query: 181 SGDASDNLSSN--------------------------------NHRTNSSPGSEVATQYP 240
             D  + LS N                                 HR +SS G E  TQYP
Sbjct: 181 GRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPTSNGQSAVTPTHRVDSSSGCETPTQYP 240

Query: 241 PTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSVSM------ 298
            TQ+M+RV ED TSP YRIPS VFSRTKS +PM+    ASNESLFS    ++S       
Sbjct: 241 QTQMMDRV-EDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLFSIQMGNMSFTREQLC 300

BLAST of Sed0007336 vs. NCBI nr
Match: XP_008453279.1 (PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-32
Identity = 169/458 (36.90%), Postives = 214/458 (46.72%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MES QKIE  ES TH            SS KL+ S SSA S+ S++SSFELIV   D  I
Sbjct: 1   MESRQKIEDIESITHSISSTGGVDLSISSNKLASSSSSA-SDSSSESSFELIVTGLDGSI 60

Query: 61  GGPSDSSEK---------NEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASESS 120
           G  SDS EK         +EFVF++ DD+ T  PM D    AK    SLSRSSSSASESS
Sbjct: 61  GVTSDSLEKDELHAVGSDSEFVFISSDDVGTHSPMADPPCTAKIPSQSLSRSSSSASESS 120

Query: 121 LHDHVIELAKPENDQDTKAM---------------ADNVESQK------------DPESE 180
           LH HVIEL KPE  +DT  M                +NVES+K              ESE
Sbjct: 121 LHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEHGETNNVESRKSIQTCSSTSSSSSSESE 180

Query: 181 HKVKLQQSGDASDNLSSNN---------------------------------HRTNSSPG 240
            K +LQ+ GD +DNL S N                                 HR +SS G
Sbjct: 181 SKPELQKGGDVADNLLSKNPSSPSVEKDNRLVTDFSDDDVPVSNEQSAATPTHRVDSSSG 240

Query: 241 SEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSV 300
           SE  TQYPPTQ+M+RV +D TSP YRIPS VFSRTKS +PM+    ASNESLFS    ++
Sbjct: 241 SETPTQYPPTQMMDRV-DDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLFSIQMGNM 300

Query: 301 SM---------ESGQKIEAGES----NTHPSSSTGEVGISTPSKKLSSSLSSSSNTSTDS 356
           S          +SG+    GES    + H +  T + G+   SK  +  L+++   + ++
Sbjct: 301 SFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLK--SKSPNGDLAATEARAAET 360

BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A6J1C0E0 (suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-35
Identity = 138/298 (46.31%), Postives = 170/298 (57.05%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEAGES THP           SS+KL  SLSSA S+ S+DSSFELI++   +F 
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSA-SDSSSDSSFELILNDSSEFP 60

Query: 61  GGPSD----------SSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSR--SSSSAS 120
           GG SD             ++EF F++ DD+ETR    +L SAAK +  SLSR  SSSSAS
Sbjct: 61  GGTSDPLKTKELNVAGHSESEFEFISSDDIETR-SAANLPSAAKTSSRSLSRSSSSSSAS 120

Query: 121 ESSLHDHVIELAKPENDQDTKAM-----------ADNVESQKDPESEHKVKLQQSG---- 180
           ESSL DHVIEL KPE ++D+K M           + +  S  + E++ K+KLQQ G    
Sbjct: 121 ESSLCDHVIELPKPEKNKDSKVMEADLSKSLQTSSSSSSSSSESEAKRKIKLQQGGVSNN 180

Query: 181 --------------DASD------NLSSN-------NHRTNSSPGSEVATQYPPTQLMER 234
                         D SD      +++SN        +R + S GSE ATQYP TQLMER
Sbjct: 181 PSSPSMDKDNRLVEDFSDDDVPISSMASNGQSPAAPTNRIDLSAGSEAATQYPQTQLMER 240

BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A6J1C0F1 (uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.7e-35
Identity = 130/265 (49.06%), Postives = 161/265 (60.75%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEAGES THP           SS+KL  SLSSA S+ S+DSSFELI++   +F 
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSA-SDSSSDSSFELILNDSSEFP 60

Query: 61  GGPSD----------SSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSR--SSSSAS 120
           GG SD             ++EF F++ DD+ETR    +L SAAK +  SLSR  SSSSAS
Sbjct: 61  GGTSDPLKTKELNVAGHSESEFEFISSDDIETR-SAANLPSAAKTSSRSLSRSSSSSSAS 120

Query: 121 ESSLHDHVIELAKPENDQDTKAMADNVESQKDPESEHKVKLQQSGD--ASDNLSSN---- 180
           ESSL DHVIEL KPE ++D+K    N  S    + ++++    S D     +++SN    
Sbjct: 121 ESSLCDHVIELPKPEKNKDSKGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSP 180

Query: 181 ---NHRTNSSPGSEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAAS 234
               +R + S GSE ATQYP TQLMERV +D  SP YRIPSHVFSRTKSKS M+    AS
Sbjct: 181 AAPTNRIDLSAGSEAATQYPQTQLMERV-DDPNSPSYRIPSHVFSRTKSKSAMEWS-VAS 240

BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A0A0LUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33
Identity = 152/382 (39.79%), Postives = 190/382 (49.74%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MESGQKIEA ES TH            SS KL+ SLSSA S+ S+DSSFELIV   D  I
Sbjct: 1   MESGQKIEAIESKTHSISSTSGVDHSISSNKLASSLSSA-SDSSSDSSFELIVTGLDGSI 60

Query: 61  GGPSDSSEKNE----------FVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASES 120
           G  SDS +K+E          FVF+  DD+ T  P TDL   AK    SLSRSSSS+SES
Sbjct: 61  GVASDSLKKDELHVVGRSDSGFVFITSDDVGTHSPKTDLPGTAKIPSQSLSRSSSSSSES 120

Query: 121 SLHDHVIELAKPENDQDTKAM-------ADNVESQK------------DPESEHKVKLQQ 180
           SLHDHVIEL KP      K +        +NVES+K              ESE K KLQ+
Sbjct: 121 SLHDHVIELPKPVEPDSKKRLPGLKHGETNNVESRKSIQTCSSTSSSSSSESESKHKLQK 180

Query: 181 SGDASDNLSSN--------------------------------NHRTNSSPGSEVATQYP 240
             D  + LS N                                 HR +SS G E  TQYP
Sbjct: 181 GRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPTSNGQSAVTPTHRVDSSSGCETPTQYP 240

Query: 241 PTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSVSM------ 298
            TQ+M+RV ED TSP YRIPS VFSRTKS +PM+    ASNESLFS    ++S       
Sbjct: 241 QTQMMDRV-EDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLFSIQMGNMSFTREQLC 300

BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A1S3BVA3 (uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.0e-33
Identity = 169/458 (36.90%), Postives = 214/458 (46.72%), Query Frame = 0

Query: 1   MESGQKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFI 60
           MES QKIE  ES TH            SS KL+ S SSA S+ S++SSFELIV   D  I
Sbjct: 1   MESRQKIEDIESITHSISSTGGVDLSISSNKLASSSSSA-SDSSSESSFELIVTGLDGSI 60

Query: 61  GGPSDSSEK---------NEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASESS 120
           G  SDS EK         +EFVF++ DD+ T  PM D    AK    SLSRSSSSASESS
Sbjct: 61  GVTSDSLEKDELHAVGSDSEFVFISSDDVGTHSPMADPPCTAKIPSQSLSRSSSSASESS 120

Query: 121 LHDHVIELAKPENDQDTKAM---------------ADNVESQK------------DPESE 180
           LH HVIEL KPE  +DT  M                +NVES+K              ESE
Sbjct: 121 LHGHVIELPKPEKYEDTNGMEPDLKKTPSGLEHGETNNVESRKSIQTCSSTSSSSSSESE 180

Query: 181 HKVKLQQSGDASDNLSSNN---------------------------------HRTNSSPG 240
            K +LQ+ GD +DNL S N                                 HR +SS G
Sbjct: 181 SKPELQKGGDVADNLLSKNPSSPSVEKDNRLVTDFSDDDVPVSNEQSAATPTHRVDSSSG 240

Query: 241 SEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSV 300
           SE  TQYPPTQ+M+RV +D TSP YRIPS VFSRTKS +PM+    ASNESLFS    ++
Sbjct: 241 SETPTQYPPTQMMDRV-DDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLFSIQMGNM 300

Query: 301 SM---------ESGQKIEAGES----NTHPSSSTGEVGISTPSKKLSSSLSSSSNTSTDS 356
           S          +SG+    GES    + H +  T + G+   SK  +  L+++   + ++
Sbjct: 301 SFTREQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLK--SKSPNGDLAATEARAAET 360

BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A5A7UV09 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003000 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-31
Identity = 166/454 (36.56%), Postives = 211/454 (46.48%), Query Frame = 0

Query: 5   QKIEAGESNTHP-----------SSQKLSPSLSSAISNPSTDSSFELIVDVPDQFIGGPS 64
           QKIE  ES TH            SS KL+ S SSA S+ S++SSFELIV   D  IG  S
Sbjct: 87  QKIEDIESITHSISSTGGVDLSISSNKLASSSSSA-SDSSSESSFELIVTGLDGSIGVTS 146

Query: 65  DSSEK---------NEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASESSLHDH 124
           DS EK         +EFVF++ DD+ T  PM D    AK    SLSRSSSSASESSLH H
Sbjct: 147 DSLEKDELHAVGSDSEFVFISSDDVGTHSPMADPPCTAKIPSQSLSRSSSSASESSLHGH 206

Query: 125 VIELAKPENDQDTKAM---------------ADNVESQK------------DPESEHKVK 184
           VIEL KPE  +DT  M                +NVES+K              ESE K +
Sbjct: 207 VIELPKPEKYEDTNGMEPDLKKTPSGLEHGETNNVESRKSIQTCSSTSSSSSSESESKPE 266

Query: 185 LQQSGDASDNLSSNN---------------------------------HRTNSSPGSEVA 244
           LQ+ GD +DNL S N                                 HR +SS GSE  
Sbjct: 267 LQKGGDVADNLLSKNPSSPSVEKDNRLVTDFSDDDVPVSNEQSAATPTHRVDSSSGSETP 326

Query: 245 TQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSVSM-- 304
           TQYPPTQ+M+RV +D TSP YRIPS VFSRTKS +PM+    ASNESLFS    ++S   
Sbjct: 327 TQYPPTQMMDRV-DDPTSPAYRIPSRVFSRTKSTAPMEWS-VASNESLFSIQMGNMSFTR 386

Query: 305 -------ESGQKIEAGES----NTHPSSSTGEVGISTPSKKLSSSLSSSSNTSTDSSFEL 356
                  +SG+    GES    + H +  T + G+   SK  +  L+++   + ++  E+
Sbjct: 387 EQLCWLGKSGELCRPGESTIDMSQHLAMKTSDCGLK--SKSPNGDLAATEARAAETMREV 446

BLAST of Sed0007336 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.8e-04
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0

Query: 112 ENDQDTKAMADNVESQKD----PESEHK-VKLQQSGDASDNLSSNNHRTNSSPGSEVATQ 171
           E+ Q+    +   +S ++    PE+E   ++L  S  +S +      R + +       Q
Sbjct: 2   ESSQEQSFFSPTNQSSRNLASKPETEDPIIRLSSSSSSSCSSIEAEPRPDQNHNHNNVEQ 61

Query: 172 YPPTQLMERVNEDLT--------SPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQV 231
            PPTQ+MER   + T        +P YRIPSHVF+RT S +P  +    SNESLFS    
Sbjct: 62  SPPTQVMERSTNNTTTTTTSTPNTPPYRIPSHVFARTTSTAP--EWSTISNESLFSIHMG 121

Query: 232 SVSMESGQKIEAGE 233
           + S   G   ++GE
Sbjct: 122 NNSFTGGDYFKSGE 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880274.14.8e-3642.41uncharacterized serine-rich protein C215.13 [Benincasa hispida][more]
XP_022135339.15.3e-3546.31suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppre... [more]
XP_022135351.11.2e-3449.06uncharacterized protein LOC111007326 isoform X2 [Momordica charantia][more]
XP_011648451.12.2e-3339.79uncharacterized protein LOC105434465 [Cucumis sativus] >KGN63731.1 hypothetical ... [more]
XP_008453279.11.4e-3236.90PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C0E02.6e-3546.31suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110073... [more]
A0A6J1C0F15.7e-3549.06uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A0A0LUN51.1e-3339.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1[more]
A0A1S3BVA37.0e-3336.90uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=... [more]
A0A5A7UV091.3e-3136.56Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX... [more]
Match NameE-valueIdentityDescription
AT1G74220.11.8e-0432.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..208
NoneNo IPR availablePANTHERPTHR33673:SF22SMOOTHELIN-LIKE PROTEIN 1coord: 9..214
NoneNo IPR availablePANTHERPTHR33673SUPPRESSOR SRP40-LIKE PROTEINcoord: 9..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007336.1Sed0007336.1mRNA