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Sed0007336 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTTCGGACAGCACTACGTGAATCTATATTCTAAGAGGGATTGATTAGAATGTGGTTGTGTTGCGGTTTGGATTAGGCCTTTAGGGTTGTTTTTGTTCTTTCTGATTTGATTTTTTCTTACTGATGTAGAAATGTGAATTGAAATTCACATTTTAAGTGAAACAAAAAAAAGGAATCAAGACATTATGAATTGTTGAACCTCGGATATTTCAGGTTATTAGGCGATGGAATGCATTGTTGTTTCGTAGCAATAGCAATACAAGTGCATTTGTAATTGAAATCTACTGATTTAGAGAAGCTAGTGAAGTGTTATTTCGAATATGTTGCGTGATAGAACATTCCAGCTATAATCGAGTCATAAAGGCCCTCTTTGATAGTCATTTAAGCCTATGTTCAATATCCATTTGATTTTTATTTTTTTGCTTTTGAAATTTAAACCTACAACAACTATGTTACCATATGTTTTATTTTATTTGGATATTTACATATTACGTCTATTTGTAGAAACTAAAGCAAAATTTAGAAACAAAAATAATAATAATAACTTTCAAAAGTTTGTGTCTGTTTTGAAAGTTGGATTGCATTCACATACTTTTTTAAGTAAAAATAAATACATTGTAGGAAAGGTGGAACACATGGTAAGAAATTTGATTAATTATTAACTTGTTCAACTCAACCAAACTCAACCCGAACTAAGGAATAATATGTACTTATATACATGTATGTGAGAGAGAAAAGAGAAATTAATTAATAAGATAGATTCTTAACATATTTGATAAATAACATTCACTAATAAAATATCTAATTTGAGTTGAAGTATAATATAGTCCACCTTTGATTTATTTGTTTGTGCATTTACTGGGTTTGACTAGAATTTTTTTATAGAGAAAAAACGAGATTAATACAAGTTGAGAGAGAGTCTAAACCAACCCAACTCAAAAATATAGGATTGGATTGAGATGAGTTGCTCTAATGCATAGAGTTAGACGGGTTAGAGGATTGACCAACCCGAAACTTTGGGTTGGTCCAAAAAAATTCCCTAACTCAACCTAGCCATGTACACCCCTAGTCCGTTCAAAGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA ATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCCAAAAGTTAAGCCCCTCCTTGTCATCAGCAATATCCAATCCCTCCACTGACAGCTCCTTTGAATTGATTGTTGATGTGCCTGACCAGTTCATAGGTGGACCAAGTGACTCTTCGGAAAAGAATGAGTTTGTGTTTGTTAATGGCGATGATCTTGAAACCCGTCCTCCTATGACCGATCTTTCCAGTGCAGCCAAAGCAACACGCGGCTCATTATCACGGTCATCATCATCTGCATCAGAATCCTCCCTGCACGATCATGTGATTGAACTCGCGAAGCCTGAAAATGACCAAGATACCAAGGCTATGGCCGACAATGTGGAAAGTCAAAAAGATCCCGAATCTGAACATAAGGTTAAACTTCAACAGAGTGGTGATGCTTCAGATAACTTATCGTCTAACAATCATAGGACAAACTCGAGCCCAGGAAGCGAGGTAGCAACTCAATATCCTCCTACACAACTGATGGAGAGAGTTAATGAGGACCTTACTTCCCCAGGTTATAGAATTCCCTCTCATGTCTTTTCTAGAACTAAATCTAAATCGCCTATGGATCAAGGGTGTGCGGCTTCCAATGAATCATTGTTCAGCACTGTTCAGGTATCTGTATCTATGGAATCTGGGCAAAAGATTGAGGCTGGTGAATCAAATACACATCCTAGCAGCAGTACAGGCGAAGTTGGTATTTCTACTCCAAGCAAAAAGTTAAGCTCCTCCTTATCCTCATCATCCAATACCTCCACTGACAGCTCCTTCGAATTGATTAATGTGCCCGACCAGTTCATTGGTGGCGCAAGTGACTCTTTGAAAAAGAATGAGCTGCATAATGCAGAATGCTCGGATTCCGAATTTGTGTTTGTTAATGGCGATGAAACTTGTCCTCCTAAGGCCGATCTTTCCAGTGCAGCCAAGACAACACGCTGCTCGTTATCAGGGACGCCATCATCTTATTCCGAATCTTCTCTGCATGATCATGGGATTGAACTCTCAAAGCCTGACAAAGATGCCAAAGCTATGAAACCAGATTTAAACAAAGCATTACCAGGGTCCAGGCTTGGTGGGACTGATACAGTTGAAAGTCAAAAAGATCTGCAAATTAAGGATCAGCTACAAAATCAACCGATGCAGCCATTCAAAAGAAGAATCCTAACACAAAAAGAAAAGGAACGTAATCAAAGATTTAAAGAGATGATAAGTCACTTACCTAATGAACCCACCACGGAGGACTATGTTGAAGTCCCCGTGGATGGGTCAGAGGGAGGAGAGATCGCAGTGCAACTCGGTCCAATGCAGGTGAAGGAGAAGACGATGCAGCTGCCACTACTGGTCGAGAGAAGGAAAGAGAAAGGTGGAGTGACAAAGCTCTATTCGTCTAATCAAGAAACAACTCAACTGCCACACTGGTCGAGGGTCGGTAGAGAAGCCATCAGCGCTTGCTCGTTAGAGGAGAGAACGTGTTGCATCTTCGATCGGCGCAGGTCAAAGAAGAACATGGTGTTTTGCTTGCTAGTTTTAATAGGAGGCCAAAGAATAGGCGAACGCATGTTGAAAGAAAGAATCTCTAGTGTGCAAGTGCTTCAAAACCATTGGAGGGAGAGAAAAGGAGGAAAGAACCTTGGTGAGAATTTTGGAGGAGGAGACAAATCTAGTGCGAGATCTGACAGCAGAAGAGACAGCAACGTTCCCCTCCGACGCCAATGA MESGQKIEAGESNTHPSSQKLSPSLSSAISNPSTDSSFELIVDVPDQFIGGPSDSSEKNEFVFVNGDDLETRPPMTDLSSAAKATRGSLSRSSSSASESSLHDHVIELAKPENDQDTKAMADNVESQKDPESEHKVKLQQSGDASDNLSSNNHRTNSSPGSEVATQYPPTQLMERVNEDLTSPGYRIPSHVFSRTKSKSPMDQGCAASNESLFSTVQVSVSMESGQKIEAGESNTHPSSSTGEVGISTPSKKLSSSLSSSSNTSTDSSFELINVPDQFIGGASDSLKKNELHNAECSDSEFVFVNGDETCPPKADLSSAAKTTRCSLSGTPSSYSESSLHDHGIELSKPDKDAKAMKPDLNKALPGSRLGGTDTVESQKDLQIKDQLQNQPMQPFKRRILTQKEKERNQRFKEMISHLPNEPTTEDYVEVPVDGSEGGEIAVQLGPMQVKEKTMQLPLLVERRKEKGGVTKLYSSNQETTQLPHWSRVGREAISACSLEERTCCIFDRRRSKKNMVFCLLVLIGGQRIGERMLKERISSVQVLQNHWRERKGGKNLGENFGGGDKSSARSDSRRDSNVPLRRQ Homology
BLAST of Sed0007336 vs. NCBI nr
Match: XP_038880274.1 (uncharacterized serine-rich protein C215.13 [Benincasa hispida]) HSP 1 Score: 163.7 bits (413), Expect = 4.8e-36 Identity = 148/349 (42.41%), Postives = 174/349 (49.86%), Query Frame = 0
BLAST of Sed0007336 vs. NCBI nr
Match: XP_022135339.1 (suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135340.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135341.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135342.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135343.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135344.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135345.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135346.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135347.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135349.1 suppressor protein SRP40 isoform X1 [Momordica charantia] >XP_022135350.1 suppressor protein SRP40 isoform X1 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 5.3e-35 Identity = 138/298 (46.31%), Postives = 170/298 (57.05%), Query Frame = 0
BLAST of Sed0007336 vs. NCBI nr
Match: XP_022135351.1 (uncharacterized protein LOC111007326 isoform X2 [Momordica charantia]) HSP 1 Score: 159.1 bits (401), Expect = 1.2e-34 Identity = 130/265 (49.06%), Postives = 161/265 (60.75%), Query Frame = 0
BLAST of Sed0007336 vs. NCBI nr
Match: XP_011648451.1 (uncharacterized protein LOC105434465 [Cucumis sativus] >KGN63731.1 hypothetical protein Csa_013801 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 2.2e-33 Identity = 152/382 (39.79%), Postives = 190/382 (49.74%), Query Frame = 0
BLAST of Sed0007336 vs. NCBI nr
Match: XP_008453279.1 (PREDICTED: uncharacterized protein LOC103494046 [Cucumis melo]) HSP 1 Score: 152.1 bits (383), Expect = 1.4e-32 Identity = 169/458 (36.90%), Postives = 214/458 (46.72%), Query Frame = 0
BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A6J1C0E0 (suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.6e-35 Identity = 138/298 (46.31%), Postives = 170/298 (57.05%), Query Frame = 0
BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A6J1C0F1 (uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 5.7e-35 Identity = 130/265 (49.06%), Postives = 161/265 (60.75%), Query Frame = 0
BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A0A0LUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-33 Identity = 152/382 (39.79%), Postives = 190/382 (49.74%), Query Frame = 0
BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A1S3BVA3 (uncharacterized protein LOC103494046 OS=Cucumis melo OX=3656 GN=LOC103494046 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 7.0e-33 Identity = 169/458 (36.90%), Postives = 214/458 (46.72%), Query Frame = 0
BLAST of Sed0007336 vs. ExPASy TrEMBL
Match: A0A5A7UV09 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003000 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-31 Identity = 166/454 (36.56%), Postives = 211/454 (46.48%), Query Frame = 0
BLAST of Sed0007336 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 1.8e-04 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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