Homology
BLAST of Sed0007330 vs. NCBI nr
Match:
XP_038901081.1 (pentatricopeptide repeat-containing protein At5g59600-like [Benincasa hispida])
HSP 1 Score: 990.3 bits (2559), Expect = 6.4e-285
Identity = 485/546 (88.83%), Postives = 511/546 (93.59%), Query Frame = 0
Query: 1 MLSLAGGAP-----NRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGGA NRFP I RGFCS S+EY+ELIET GR RELN GKLLHARLIINGLA
Sbjct: 1 MLSLAGGAVFLRALNRFPAISRGFCSLSNEYIELIETCGRDRELNFGKLLHARLIINGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAK I YAACG+I DAR LFDKIPQTNPRRWI LIGAYSR GYYTEAL+VF EL
Sbjct: 61 RLTHFAAKFIAFYAACGRIKDARILFDKIPQTNPRRWIVLIGAYSRCGYYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QRGG R SE+I+PSVLKACGHLSDN TGRKLHTLILKYSLESDAYVCSALIDMYAKSG +
Sbjct: 121 QRGGLRPSEYIIPSVLKACGHLSDNTTGRKLHTLILKYSLESDAYVCSALIDMYAKSGEI 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV+EMQ L VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQMG+EEMV+ELFKEMEANGIQPDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+GFCPTS
Sbjct: 241 SQMGEEEMVHELFKEMEANGIQPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGFCPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
+TISSLLPACAS GNGRRGKEIHGH+MV+GVEKDVYVRTALVDMYAKCGYF+EAR+LFWR
Sbjct: 301 STISSLLPACASVGNGRRGKEIHGHSMVLGVEKDVYVRTALVDMYAKCGYFHEARILFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHG C+EAIELFHQM D DEKKLDHLTFTAVLTACGHAG+VDL
Sbjct: 361 MSERNSATWNSMIFGYANHGCCNEAIELFHQMKDDDEKKLDHLTFTAVLTACGHAGLVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
G++LF+LMQSKYGIVPRVEHYACMVDV GRAGKLAEAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVLGRAGKLAEAYDLIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWG VVKLK+MMKKRKLKKFPG
Sbjct: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGHVVKLKKMMKKRKLKKFPG 540
BLAST of Sed0007330 vs. NCBI nr
Match:
XP_022986839.1 (pentatricopeptide repeat-containing protein At5g59600 [Cucurbita maxima])
HSP 1 Score: 987.6 bits (2552), Expect = 4.1e-284
Identity = 483/546 (88.46%), Postives = 511/546 (93.59%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGG A NRFP IRRGFCS SDEY++LIETYGR RELN G+LLHARLIINGLA
Sbjct: 1 MLSLAGGAAFFRATNRFPAIRRGFCSSSDEYIKLIETYGRDRELNFGRLLHARLIINGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAKLI YAACGKI+DAR+LFDKIPQTNPRRWI LIGAYSR G+YTEAL+VF EL
Sbjct: 61 RLTHFAAKLIAFYAACGKINDARELFDKIPQTNPRRWIVLIGAYSRYGFYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QR GS SE+I+PSVLKACGHLSD PTGRKLH LILKYSLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRQGSTPSEYIIPSVLKACGHLSDIPTGRKLHALILKYSLESDAYVCSALIDMYAKSGQV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV++MQ L VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEKMQVLGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQM +EEMV+ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+G CPTS
Sbjct: 241 SQMDEEEMVHELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGLCPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPACASAGNGRRGKEIHG+A+V+GVEKD+YVRTALVDMYAKCGYFYEA MLFWR
Sbjct: 301 ATISSLLPACASAGNGRRGKEIHGYALVLGVEKDIYVRTALVDMYAKCGYFYEAGMLFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTAC HAGMVDL
Sbjct: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMKDNDEKKLDHLTFTAVLTACAHAGMVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
GK+LF+LMQ+K+GIVPRVEHYACMVDVFGRAGKL EAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GKSLFQLMQTKHGIVPRVEHYACMVDVFGRAGKLGEAYDIIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHL+ELEPGSVGNSLLLSDLYANAGSWG VVKLK MMKKRKLKKFPG
Sbjct: 481 RKHGEIELAEEAAKHLAELEPGSVGNSLLLSDLYANAGSWGHVVKLKSMMKKRKLKKFPG 540
BLAST of Sed0007330 vs. NCBI nr
Match:
XP_022148483.1 (pentatricopeptide repeat-containing protein At5g59600-like [Momordica charantia])
HSP 1 Score: 984.9 bits (2545), Expect = 2.7e-283
Identity = 487/547 (89.03%), Postives = 508/547 (92.87%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
M SLAGG AP+RF IRRGF S SD YVELIETYGR RELN G+LLHARLI NGLA
Sbjct: 1 MHSLAGGAAFRRAPSRFLAIRRGFLSSSDAYVELIETYGRDRELNFGRLLHARLITNGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAKLI YAACGKI DAR LFDKIPQTNPRRWI LIGAY+RSG+YTEAL+VF EL
Sbjct: 61 RLTHFAAKLIAFYAACGKIKDARILFDKIPQTNPRRWIVLIGAYARSGFYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QRGGSR SE+I+PSVLKACGHLSDNPTGRKLH LILKYSLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRGGSRPSEYIIPSVLKACGHLSDNPTGRKLHGLILKYSLESDAYVCSALIDMYAKSGQV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV+EMQ VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVFGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQMG+EEMV ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAF TFRRMLN+GFCPTS
Sbjct: 241 SQMGEEEMVRELFKEMEANGIKPDVVSWTSVISGFVQNFRNEEAFCTFRRMLNAGFCPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPAC S GNGRRGKEIHGHA+VIGVEKDVYVRTALVDMYAKCGYFYEAR+LF R
Sbjct: 301 ATISSLLPACTSVGNGRRGKEIHGHALVIGVEKDVYVRTALVDMYAKCGYFYEARVLFCR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSER+SATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTACGH+GMVDL
Sbjct: 361 MSERSSATWNSMIFGYANHGYCSEAIELFHQMKDDDEKKLDHLTFTAVLTACGHSGMVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
GK LF+LMQ+KYGIVPRVEHYACMVDVFGRAGKL EAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GKGLFQLMQNKYGIVPRVEHYACMVDVFGRAGKLGEAYDLIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEA KHLSELEPGSVGNSLLLSDLYANAGSWG VVKLKRMMKKRKLKKFPG
Sbjct: 481 RKHGEIELAEEAVKHLSELEPGSVGNSLLLSDLYANAGSWGHVVKLKRMMKKRKLKKFPG 540
Query: 541 CSWIETV 542
CSWIETV
Sbjct: 541 CSWIETV 547
BLAST of Sed0007330 vs. NCBI nr
Match:
KAG6570687.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 981.1 bits (2535), Expect = 3.9e-282
Identity = 481/547 (87.93%), Postives = 512/547 (93.60%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRG-FCSFSDEYVELIETYGRARELNSGKLLHARLIINGL 60
MLSLAGG A NRFP IRRG FCS SDEY++LIETYGR RELN G+LLHARLIINGL
Sbjct: 1 MLSLAGGAAFLRATNRFPAIRRGFFCSSSDEYIKLIETYGRDRELNFGRLLHARLIINGL 60
Query: 61 ARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSE 120
ARLTHFAAKL+ YAACGKI+DAR++FDKIPQTNPRRWI LIGAYSR G+YTEAL+VF E
Sbjct: 61 ARLTHFAAKLVAFYAACGKINDAREVFDKIPQTNPRRWIVLIGAYSRYGFYTEALSVFCE 120
Query: 121 LQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGH 180
LQR GSR SE+I+PSVLKACGHLSD PTGRKLH LILKYSLESDAYVCSALIDMYAKSG
Sbjct: 121 LQRQGSRPSEYIIPSVLKACGHLSDIPTGRKLHALILKYSLESDAYVCSALIDMYAKSGQ 180
Query: 181 VEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAG 240
VE RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV++MQ L VKPNLVTWNTLV G
Sbjct: 181 VEMARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEKMQVLGVKPNLVTWNTLVTG 240
Query: 241 FSQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPT 300
FSQM +EEMV+E+FKEMEANGI+PDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+G CPT
Sbjct: 241 FSQMDEEEMVHEIFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGLCPT 300
Query: 301 SATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFW 360
SATISSLLPACASAGNGRRGKEIHG+A+V+GVEKDVYVRTALVDMYAKCGYFYEA MLFW
Sbjct: 301 SATISSLLPACASAGNGRRGKEIHGYALVLGVEKDVYVRTALVDMYAKCGYFYEAGMLFW 360
Query: 361 RMSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVD 420
RMSERNSATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTAC HAGMVD
Sbjct: 361 RMSERNSATWNSMIFGYANHGYCSEAIELFHQMKDNDEKKLDHLTFTAVLTACAHAGMVD 420
Query: 421 LGKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGA 480
LGK+LF+LMQ+K+GIVPRVEHYACMVDVFGRAGKLAEAY++IKTMPVEPDLYVWGALLGA
Sbjct: 421 LGKSLFQLMQTKHGIVPRVEHYACMVDVFGRAGKLAEAYDIIKTMPVEPDLYVWGALLGA 480
Query: 481 CRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFP 540
CRKHGEIELAEEAAKHL++LEPGSVGNSLLLSDLYANAGSWG VVKLK MMKKRKLKKFP
Sbjct: 481 CRKHGEIELAEEAAKHLAKLEPGSVGNSLLLSDLYANAGSWGHVVKLKSMMKKRKLKKFP 540
BLAST of Sed0007330 vs. NCBI nr
Match:
XP_023511811.1 (pentatricopeptide repeat-containing protein At5g59600 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 980.7 bits (2534), Expect = 5.1e-282
Identity = 480/546 (87.91%), Postives = 509/546 (93.22%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGG A NRFP IRRGFCS SDEY++LIETYGR RELN G+LLHARLIINGLA
Sbjct: 1 MLSLAGGAAFLKATNRFPAIRRGFCSSSDEYIKLIETYGRDRELNFGRLLHARLIINGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAKLI YAACGKI DAR++FDKIPQTNPRRWI LIGAYSR G+YTEAL+VF EL
Sbjct: 61 RLTHFAAKLIAFYAACGKISDAREVFDKIPQTNPRRWIVLIGAYSRYGFYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QR GSR SE+I+PSVLKACGHLSD PTGRKLH LILKYSLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRQGSRPSEYIIPSVLKACGHLSDIPTGRKLHALILKYSLESDAYVCSALIDMYAKSGQV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV++MQ L VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEKMQVLGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQM +EEMV+ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+G PTS
Sbjct: 241 SQMDEEEMVHELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGLWPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPACAS GNGRRGKEIHGHA+V+GVEKDVYVRTALVDMYAKCGYFYEA MLFWR
Sbjct: 301 ATISSLLPACASVGNGRRGKEIHGHALVLGVEKDVYVRTALVDMYAKCGYFYEAGMLFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHGYC+EAI LFHQM D DEKKLDHLTFTAVLTAC HAGMVDL
Sbjct: 361 MSERNSATWNSMIFGYANHGYCNEAIALFHQMKDNDEKKLDHLTFTAVLTACAHAGMVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
GK+LF+LMQ+K+GIVPRVEHYACMVDVFGRAGKLAEAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GKSLFQLMQTKHGIVPRVEHYACMVDVFGRAGKLAEAYDIIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHL+ELEPGSVGNSLLLSDLYANAGSWG VVKLK +MKKRKLK+FPG
Sbjct: 481 RKHGEIELAEEAAKHLAELEPGSVGNSLLLSDLYANAGSWGHVVKLKSLMKKRKLKRFPG 540
BLAST of Sed0007330 vs. ExPASy Swiss-Prot
Match:
Q9FGR2 (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)
HSP 1 Score: 604.0 bits (1556), Expect = 1.7e-171
Identity = 289/517 (55.90%), Postives = 391/517 (75.63%), Query Frame = 0
Query: 26 YVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIHDARKLFDKIP 85
YVELIE GR R G++LHA L+ +G+ARLT AAKL+ Y CGK+ DARK+FD++P
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 86 QTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACGHLSDNPTGRK 145
+ + + +IGA +R+GYY E+L+ F E+ + G +L FIVPS+LKA +L D G+
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 146 LHTLILKYSLESDAYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGL 205
+H L+LK+S ESDA++ S+LIDMY+K G V R+VF + +DLV NAM+SGYA++
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 206 AEEALDLVQEMQGL-VKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANGIQPDVVSWTS 265
A+EAL+LV++M+ L +KP+++TWN L++GFS M +EE V E+ + M +G +PDVVSWTS
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 266 VISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLPACASAGNGRRGKEIHGHAMVIG 325
+ISG V N++NE+AF F++ML G P SATI +LLPAC + + GKEIHG+++V G
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 326 VEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAIELFH 385
+E +VR+AL+DMY KCG+ EA +LF + ++ + T+NSMIF YANHG +A+ELF
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 386 QMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVDVFGR 445
Q M+ +KLDHLTFTA+LTAC HAG+ DLG+NLF LMQ+KY IVPR+EHYACMVD+ GR
Sbjct: 379 Q-MEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGR 438
Query: 446 AGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLL 505
AGKL EAYE+IK M +EPDL+VWGALL ACR HG +ELA AAKHL+ELEP + GN LLL
Sbjct: 439 AGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLL 498
Query: 506 SDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIETV 542
+ LYANAGSW VV++K+M+KK++ ++F G SW+ETV
Sbjct: 499 TSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVETV 534
BLAST of Sed0007330 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 343.6 bits (880), Expect = 4.1e-93
Identity = 176/531 (33.15%), Postives = 290/531 (54.61%), Query Frame = 0
Query: 16 RRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIH 75
+ GF + ++ ++N G +H+ + + + + L+ +Y+ CG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 76 DARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACG 135
DA+++FD++ N W +LI + ++G EAL+VF + E + SV+ AC
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 136 HLSDNPTGRKLHTLILKY-SLESDAYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALN 195
LS G+++H ++K L +D + +A +DMYAK +++ R +F+SM ++++A
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 196 AMVSGYAHHGLAEEALDLVQEMQGLVKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANG 255
+M+SGYA + A + +M + N+V+WN L+AG++Q G+
Sbjct: 325 SMISGYAMAASTKAARLMFTKM---AERNVVSWNALIAGYTQNGE--------------- 384
Query: 256 IQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLPACASAGNGRRGK 315
NEEA F + CPT + +++L ACA G
Sbjct: 385 --------------------NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 444
Query: 316 EIHGHAM------VIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIF 375
+ H H + G E D++V +L+DMY KCG E ++F +M ER+ +WN+MI
Sbjct: 445 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 504
Query: 376 GYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGI 435
G+A +GY +EA+ELF +M++ EK DH+T VL+ACGHAG V+ G++ F M +G+
Sbjct: 505 GFAQNGYGNEALELFREMLESGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 564
Query: 436 VPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAK 495
P +HY CMVD+ GRAG L EA +I+ MP++PD +WG+LL AC+ H I L + A+
Sbjct: 565 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 624
Query: 496 HLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIE 540
L E+EP + G +LLS++YA G W V+ +++ M+K + K PGCSWI+
Sbjct: 625 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
BLAST of Sed0007330 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 342.4 bits (877), Expect = 9.1e-93
Identity = 182/537 (33.89%), Postives = 288/537 (53.63%), Query Frame = 0
Query: 39 LNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGA 98
++ G LH ++++G+ L+ +Y+ CG+ DA KLF + + + W +I
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 99 YSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESD 158
Y +SG E+L F E+ G S+L + + +++H I+++S+ D
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 159 AYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQG 218
++ SALID Y K V + +F D+V AM+SGY H+GL ++L++ + +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 219 L-VKPNLVTWNTL-----------------------------------VAGFSQMGDEEM 278
+ + PN +T ++ + +++ G +
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 279 VYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLP 338
YE+F+ + + D+VSW S+I+ Q+ A FR+M SG C +IS+ L
Sbjct: 495 AYEIFERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 554
Query: 339 ACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSAT 398
ACA+ + GK IHG + + DVY + L+DMYAKCG A +F M E+N +
Sbjct: 555 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 614
Query: 399 WNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELM 458
WNS+I NHG +++ LFH+M++ + D +TF ++++C H G VD G F M
Sbjct: 615 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 674
Query: 459 QSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIEL 518
YGI P+ EHYAC+VD+FGRAG+L EAYE +K+MP PD VWG LLGACR H +EL
Sbjct: 675 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVEL 734
Query: 519 AEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIE 540
AE A+ L +L+P + G +L+S+ +ANA W V K++ +MK+R+++K PG SWIE
Sbjct: 735 AEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
BLAST of Sed0007330 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 340.9 bits (873), Expect = 2.7e-92
Identity = 203/579 (35.06%), Postives = 313/579 (54.06%), Query Frame = 0
Query: 1 MLSLAGGAPNRFPVIRRGFCSF------SDEYVELIETYGRARELNSGKLLHARLIINGL 60
M+S G A N VI R F F + +Y R + G +H + G
Sbjct: 123 MISGYGRAGNSSEVI-RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGF 182
Query: 61 ARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSE 120
+ AA LI LY+ + +AR LFD++P + W A+I Y +SG EAL
Sbjct: 183 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT---- 242
Query: 121 LQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGH 180
L G + V S+L AC D G +H+ +K+ LES+ +V + LID+YA+ G
Sbjct: 243 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 302
Query: 181 VEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQ-GLVKPNLVTWNTLVAG 240
+ ++VF+ M +DL++ N+++ Y + A+ L QEM+ ++P+ +T +L +
Sbjct: 303 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 362
Query: 241 FSQMGDEE---------------------------MVYELFKEMEANGI-----QPDVVS 300
SQ+GD M +L A + DV+S
Sbjct: 363 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 422
Query: 301 WTSVISGFVQNYRNEEAFGTFRRMLNSG-FCPTSATISSLLPACASAGNGRRGKEIHGHA 360
W ++ISG+ QN EA + M G T S+LPAC+ AG R+G ++HG
Sbjct: 423 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 482
Query: 361 MVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAI 420
+ G+ DV+V T+L DMY KCG +A LF+++ NS WN++I + HG+ +A+
Sbjct: 483 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 542
Query: 421 ELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVD 480
LF +M+D + K DH+TF +L+AC H+G+VD G+ FE+MQ+ YGI P ++HY CMVD
Sbjct: 543 MLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 602
Query: 481 VFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGN 540
++GRAG+L A + IK+M ++PD +WGALL ACR HG ++L + A++HL E+EP VG
Sbjct: 603 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 662
BLAST of Sed0007330 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 339.0 bits (868), Expect = 1.0e-91
Identity = 196/560 (35.00%), Postives = 305/560 (54.46%), Query Frame = 0
Query: 13 PVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACG 72
PV + S + E ++ + LN K LHA++I L H A KLI + C
Sbjct: 6 PVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCR 65
Query: 73 KIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLK 132
+ + A ++F+++ + N +LI A++++ +A VFSE+QR G F P +LK
Sbjct: 66 QTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLK 125
Query: 133 ACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYA---------------------- 192
AC S P + +H I K L SD YV +ALID Y+
Sbjct: 126 ACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT 185
Query: 193 -----------KSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL 252
K+G + RR+F+ M +DL++ N M+ GYA +A +L ++M
Sbjct: 186 VSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP-- 245
Query: 253 VKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAF 312
+ N V+W+T+V G+S+ GD EM +F +M +VV+WT +I+G+ + +EA
Sbjct: 246 -ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEAD 305
Query: 313 GTFRRMLNSGFCPTSATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMY 372
+M+ SG +A + S+L AC +G G IH + + YV AL+DMY
Sbjct: 306 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 365
Query: 373 AKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTF 432
AKCG +A +F + +++ +WN+M+ G HG+ EAIELF +M + + D +TF
Sbjct: 366 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR-REGIRPDKVTF 425
Query: 433 TAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMP 492
AVL +C HAG++D G + F M+ Y +VP+VEHY C+VD+ GR G+L EA +V++TMP
Sbjct: 426 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 485
Query: 493 VEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVK 540
+EP++ +WGALLGACR H E+++A+E +L +L+P GN LLS++YA A W V
Sbjct: 486 MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 545
BLAST of Sed0007330 vs. ExPASy TrEMBL
Match:
A0A6J1JH75 (pentatricopeptide repeat-containing protein At5g59600 OS=Cucurbita maxima OX=3661 GN=LOC111484460 PE=4 SV=1)
HSP 1 Score: 987.6 bits (2552), Expect = 2.0e-284
Identity = 483/546 (88.46%), Postives = 511/546 (93.59%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGG A NRFP IRRGFCS SDEY++LIETYGR RELN G+LLHARLIINGLA
Sbjct: 1 MLSLAGGAAFFRATNRFPAIRRGFCSSSDEYIKLIETYGRDRELNFGRLLHARLIINGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAKLI YAACGKI+DAR+LFDKIPQTNPRRWI LIGAYSR G+YTEAL+VF EL
Sbjct: 61 RLTHFAAKLIAFYAACGKINDARELFDKIPQTNPRRWIVLIGAYSRYGFYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QR GS SE+I+PSVLKACGHLSD PTGRKLH LILKYSLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRQGSTPSEYIIPSVLKACGHLSDIPTGRKLHALILKYSLESDAYVCSALIDMYAKSGQV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV++MQ L VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEKMQVLGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQM +EEMV+ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+G CPTS
Sbjct: 241 SQMDEEEMVHELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGLCPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPACASAGNGRRGKEIHG+A+V+GVEKD+YVRTALVDMYAKCGYFYEA MLFWR
Sbjct: 301 ATISSLLPACASAGNGRRGKEIHGYALVLGVEKDIYVRTALVDMYAKCGYFYEAGMLFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTAC HAGMVDL
Sbjct: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMKDNDEKKLDHLTFTAVLTACAHAGMVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
GK+LF+LMQ+K+GIVPRVEHYACMVDVFGRAGKL EAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GKSLFQLMQTKHGIVPRVEHYACMVDVFGRAGKLGEAYDIIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHL+ELEPGSVGNSLLLSDLYANAGSWG VVKLK MMKKRKLKKFPG
Sbjct: 481 RKHGEIELAEEAAKHLAELEPGSVGNSLLLSDLYANAGSWGHVVKLKSMMKKRKLKKFPG 540
BLAST of Sed0007330 vs. ExPASy TrEMBL
Match:
A0A6J1D479 (pentatricopeptide repeat-containing protein At5g59600-like OS=Momordica charantia OX=3673 GN=LOC111017110 PE=4 SV=1)
HSP 1 Score: 984.9 bits (2545), Expect = 1.3e-283
Identity = 487/547 (89.03%), Postives = 508/547 (92.87%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
M SLAGG AP+RF IRRGF S SD YVELIETYGR RELN G+LLHARLI NGLA
Sbjct: 1 MHSLAGGAAFRRAPSRFLAIRRGFLSSSDAYVELIETYGRDRELNFGRLLHARLITNGLA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAKLI YAACGKI DAR LFDKIPQTNPRRWI LIGAY+RSG+YTEAL+VF EL
Sbjct: 61 RLTHFAAKLIAFYAACGKIKDARILFDKIPQTNPRRWIVLIGAYARSGFYTEALSVFCEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QRGGSR SE+I+PSVLKACGHLSDNPTGRKLH LILKYSLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRGGSRPSEYIIPSVLKACGHLSDNPTGRKLHGLILKYSLESDAYVCSALIDMYAKSGQV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV+EMQ VKPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVFGVKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQMG+EEMV ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAF TFRRMLN+GFCPTS
Sbjct: 241 SQMGEEEMVRELFKEMEANGIKPDVVSWTSVISGFVQNFRNEEAFCTFRRMLNAGFCPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPAC S GNGRRGKEIHGHA+VIGVEKDVYVRTALVDMYAKCGYFYEAR+LF R
Sbjct: 301 ATISSLLPACTSVGNGRRGKEIHGHALVIGVEKDVYVRTALVDMYAKCGYFYEARVLFCR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSER+SATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTACGH+GMVDL
Sbjct: 361 MSERSSATWNSMIFGYANHGYCSEAIELFHQMKDDDEKKLDHLTFTAVLTACGHSGMVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
GK LF+LMQ+KYGIVPRVEHYACMVDVFGRAGKL EAY++IKTMPVEPDLYVWGALLGAC
Sbjct: 421 GKGLFQLMQNKYGIVPRVEHYACMVDVFGRAGKLGEAYDLIKTMPVEPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEA KHLSELEPGSVGNSLLLSDLYANAGSWG VVKLKRMMKKRKLKKFPG
Sbjct: 481 RKHGEIELAEEAVKHLSELEPGSVGNSLLLSDLYANAGSWGHVVKLKRMMKKRKLKKFPG 540
Query: 541 CSWIETV 542
CSWIETV
Sbjct: 541 CSWIETV 547
BLAST of Sed0007330 vs. ExPASy TrEMBL
Match:
A0A6J1FW47 (pentatricopeptide repeat-containing protein At5g59600 OS=Cucurbita moschata OX=3662 GN=LOC111449033 PE=4 SV=1)
HSP 1 Score: 978.4 bits (2528), Expect = 1.2e-281
Identity = 481/547 (87.93%), Postives = 511/547 (93.42%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRG-FCSFSDEYVELIETYGRARELNSGKLLHARLIINGL 60
MLSLAGG A NRFP IRRG FCS SDEY++LIETYGR RELN G+LLHARLIINGL
Sbjct: 1 MLSLAGGAAFLRATNRFPAIRRGFFCSSSDEYIKLIETYGRDRELNFGRLLHARLIINGL 60
Query: 61 ARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSE 120
ARLTHFAAKLI YAACGKI+DAR++FDKIPQTNPRRWI LIGAYSR G+YTEAL+VF E
Sbjct: 61 ARLTHFAAKLIAFYAACGKINDAREVFDKIPQTNPRRWIVLIGAYSRYGFYTEALSVFCE 120
Query: 121 LQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGH 180
LQR GSR SE+I+PSVLKACGHLSD TGRKLH LILKYS ESDAYVCSALIDMYAKSG
Sbjct: 121 LQRQGSRPSEYIIPSVLKACGHLSDILTGRKLHALILKYSFESDAYVCSALIDMYAKSGQ 180
Query: 181 VEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAG 240
VEK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV++MQ L VKPNLVTWNTLV G
Sbjct: 181 VEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEKMQVLGVKPNLVTWNTLVTG 240
Query: 241 FSQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPT 300
FSQM +EEMV+E+FKEMEANGI+PDVVSWTSVISGFVQN+RNEEAFGTFRRMLN+G CPT
Sbjct: 241 FSQMDEEEMVHEIFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFGTFRRMLNAGLCPT 300
Query: 301 SATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFW 360
SATISSLLPACASAGNGRRGKEIHG+A+V+GVEKDVYVRTALVDMYAKCGYFYEA MLFW
Sbjct: 301 SATISSLLPACASAGNGRRGKEIHGYALVLGVEKDVYVRTALVDMYAKCGYFYEAGMLFW 360
Query: 361 RMSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVD 420
RMSERNSATWNSMIFGYANHGYCSEAIELFHQM D DEKKLDHLTFTAVLTAC HAGMVD
Sbjct: 361 RMSERNSATWNSMIFGYANHGYCSEAIELFHQMKDNDEKKLDHLTFTAVLTACAHAGMVD 420
Query: 421 LGKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGA 480
LGK+LF+LMQ+K+GIVPRVEHYACMVDVFGRAGKLAEAY++IKTMPVEPDLYVWGALLGA
Sbjct: 421 LGKSLFQLMQTKHGIVPRVEHYACMVDVFGRAGKLAEAYDIIKTMPVEPDLYVWGALLGA 480
Query: 481 CRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFP 540
CRKHGEIELAEEAAKHL++LEPGSVGNSLLLSDLYANAGSWG VVKLK MMKKRKLKKFP
Sbjct: 481 CRKHGEIELAEEAAKHLAKLEPGSVGNSLLLSDLYANAGSWGHVVKLKSMMKKRKLKKFP 540
BLAST of Sed0007330 vs. ExPASy TrEMBL
Match:
A0A5A7V3K8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00210 PE=4 SV=1)
HSP 1 Score: 974.5 bits (2518), Expect = 1.8e-280
Identity = 475/546 (87.00%), Postives = 507/546 (92.86%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGG APNR P I RGFCS SDEY+ELIET GR R+LN G+LLHARLIING A
Sbjct: 1 MLSLAGGAVFLRAPNRLPAILRGFCSSSDEYIELIETCGRNRDLNFGRLLHARLIINGSA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAK I YAACGKI DAR LFDKIPQTNPRRWI LIGAYSR GYY EAL+VF EL
Sbjct: 61 RLTHFAAKFIAFYAACGKIKDARVLFDKIPQTNPRRWIVLIGAYSRCGYYPEALSVFGEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QRGG R SE+I+PSVLKACGHLS+ TGRKLHTLILK+SLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKHSLESDAYVCSALIDMYAKSGEV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV+EMQ L +KPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQMG+EEMV+ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAF TFRRMLN+GF PTS
Sbjct: 241 SQMGEEEMVHELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPACAS GNGR GKEIHGH++V+GVEKDVYVRTALVDMYAKCGYFYEA++LFWR
Sbjct: 301 ATISSLLPACASVGNGRCGKEIHGHSLVLGVEKDVYVRTALVDMYAKCGYFYEAKILFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHGYC+EAIELFHQM D DEKKLDHLTFTA+LTAC HAG+VDL
Sbjct: 361 MSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
G++LF+LMQSKYGIVPRVEHYACMVDVFGRAGKLAEAY++IKTMPV+PDLYVWGALLGAC
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHLSELEPGSVGNSLLLSD+YANAGSWG VVKLKRMMKKRK+KKFPG
Sbjct: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKRMMKKRKMKKFPG 540
BLAST of Sed0007330 vs. ExPASy TrEMBL
Match:
A0A1S3CL56 (pentatricopeptide repeat-containing protein At5g59600 OS=Cucumis melo OX=3656 GN=LOC103502062 PE=4 SV=1)
HSP 1 Score: 974.5 bits (2518), Expect = 1.8e-280
Identity = 475/546 (87.00%), Postives = 507/546 (92.86%), Query Frame = 0
Query: 1 MLSLAGG-----APNRFPVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLA 60
MLSLAGG APNR P I RGFCS SDEY+ELIET GR R+LN G+LLHARLIING A
Sbjct: 1 MLSLAGGAVFLRAPNRLPAILRGFCSSSDEYIELIETCGRNRDLNFGRLLHARLIINGSA 60
Query: 61 RLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSEL 120
RLTHFAAK I YAACGKI DAR LFDKIPQTNPRRWI LIGAYSR GYY EAL+VF EL
Sbjct: 61 RLTHFAAKFIAFYAACGKIKDARVLFDKIPQTNPRRWIVLIGAYSRCGYYPEALSVFGEL 120
Query: 121 QRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGHV 180
QRGG R SE+I+PSVLKACGHLS+ TGRKLHTLILK+SLESDAYVCSALIDMYAKSG V
Sbjct: 121 QRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKHSLESDAYVCSALIDMYAKSGEV 180
Query: 181 EKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL-VKPNLVTWNTLVAGF 240
EK RRVFESMAGKDLVALNAMVSGYAHHGLAEEAL+LV+EMQ L +KPNLVTWNTLV GF
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGF 240
Query: 241 SQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTS 300
SQMG+EEMV+ELFKEMEANGI+PDVVSWTSVISGFVQN+RNEEAF TFRRMLN+GF PTS
Sbjct: 241 SQMGEEEMVHELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTS 300
Query: 301 ATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWR 360
ATISSLLPACAS GNGR GKEIHGH++V+GVEKDVYVRTALVDMYAKCGYFYEA++LFWR
Sbjct: 301 ATISSLLPACASVGNGRCGKEIHGHSLVLGVEKDVYVRTALVDMYAKCGYFYEAKILFWR 360
Query: 361 MSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDL 420
MSERNSATWNSMIFGYANHGYC+EAIELFHQM D DEKKLDHLTFTA+LTAC HAG+VDL
Sbjct: 361 MSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDL 420
Query: 421 GKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGAC 480
G++LF+LMQSKYGIVPRVEHYACMVDVFGRAGKLAEAY++IKTMPV+PDLYVWGALLGAC
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGAC 480
Query: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPG 540
RKHGEIELAEEAAKHLSELEPGSVGNSLLLSD+YANAGSWG VVKLKRMMKKRK+KKFPG
Sbjct: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKRMMKKRKMKKFPG 540
BLAST of Sed0007330 vs. TAIR 10
Match:
AT5G59600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 604.0 bits (1556), Expect = 1.2e-172
Identity = 289/517 (55.90%), Postives = 391/517 (75.63%), Query Frame = 0
Query: 26 YVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIHDARKLFDKIP 85
YVELIE GR R G++LHA L+ +G+ARLT AAKL+ Y CGK+ DARK+FD++P
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 86 QTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACGHLSDNPTGRK 145
+ + + +IGA +R+GYY E+L+ F E+ + G +L FIVPS+LKA +L D G+
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 146 LHTLILKYSLESDAYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGL 205
+H L+LK+S ESDA++ S+LIDMY+K G V R+VF + +DLV NAM+SGYA++
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 206 AEEALDLVQEMQGL-VKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANGIQPDVVSWTS 265
A+EAL+LV++M+ L +KP+++TWN L++GFS M +EE V E+ + M +G +PDVVSWTS
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 266 VISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLPACASAGNGRRGKEIHGHAMVIG 325
+ISG V N++NE+AF F++ML G P SATI +LLPAC + + GKEIHG+++V G
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 326 VEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAIELFH 385
+E +VR+AL+DMY KCG+ EA +LF + ++ + T+NSMIF YANHG +A+ELF
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 386 QMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVDVFGR 445
Q M+ +KLDHLTFTA+LTAC HAG+ DLG+NLF LMQ+KY IVPR+EHYACMVD+ GR
Sbjct: 379 Q-MEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGR 438
Query: 446 AGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLL 505
AGKL EAYE+IK M +EPDL+VWGALL ACR HG +ELA AAKHL+ELEP + GN LLL
Sbjct: 439 AGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLL 498
Query: 506 SDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIETV 542
+ LYANAGSW VV++K+M+KK++ ++F G SW+ETV
Sbjct: 499 TSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVETV 534
BLAST of Sed0007330 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 343.6 bits (880), Expect = 2.9e-94
Identity = 176/531 (33.15%), Postives = 290/531 (54.61%), Query Frame = 0
Query: 16 RRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIH 75
+ GF + ++ ++N G +H+ + + + + L+ +Y+ CG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 76 DARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACG 135
DA+++FD++ N W +LI + ++G EAL+VF + E + SV+ AC
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 136 HLSDNPTGRKLHTLILKY-SLESDAYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALN 195
LS G+++H ++K L +D + +A +DMYAK +++ R +F+SM ++++A
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 196 AMVSGYAHHGLAEEALDLVQEMQGLVKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANG 255
+M+SGYA + A + +M + N+V+WN L+AG++Q G+
Sbjct: 325 SMISGYAMAASTKAARLMFTKM---AERNVVSWNALIAGYTQNGE--------------- 384
Query: 256 IQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLPACASAGNGRRGK 315
NEEA F + CPT + +++L ACA G
Sbjct: 385 --------------------NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 444
Query: 316 EIHGHAM------VIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIF 375
+ H H + G E D++V +L+DMY KCG E ++F +M ER+ +WN+MI
Sbjct: 445 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 504
Query: 376 GYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGI 435
G+A +GY +EA+ELF +M++ EK DH+T VL+ACGHAG V+ G++ F M +G+
Sbjct: 505 GFAQNGYGNEALELFREMLESGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 564
Query: 436 VPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAK 495
P +HY CMVD+ GRAG L EA +I+ MP++PD +WG+LL AC+ H I L + A+
Sbjct: 565 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 624
Query: 496 HLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIE 540
L E+EP + G +LLS++YA G W V+ +++ M+K + K PGCSWI+
Sbjct: 625 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
BLAST of Sed0007330 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 342.4 bits (877), Expect = 6.5e-94
Identity = 182/537 (33.89%), Postives = 288/537 (53.63%), Query Frame = 0
Query: 39 LNSGKLLHARLIINGLARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGA 98
++ G LH ++++G+ L+ +Y+ CG+ DA KLF + + + W +I
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 99 YSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESD 158
Y +SG E+L F E+ G S+L + + +++H I+++S+ D
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 159 AYVCSALIDMYAKSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQG 218
++ SALID Y K V + +F D+V AM+SGY H+GL ++L++ + +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 219 L-VKPNLVTWNTL-----------------------------------VAGFSQMGDEEM 278
+ + PN +T ++ + +++ G +
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 279 VYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAFGTFRRMLNSGFCPTSATISSLLP 338
YE+F+ + + D+VSW S+I+ Q+ A FR+M SG C +IS+ L
Sbjct: 495 AYEIFERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 554
Query: 339 ACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSAT 398
ACA+ + GK IHG + + DVY + L+DMYAKCG A +F M E+N +
Sbjct: 555 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 614
Query: 399 WNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELM 458
WNS+I NHG +++ LFH+M++ + D +TF ++++C H G VD G F M
Sbjct: 615 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 674
Query: 459 QSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIEL 518
YGI P+ EHYAC+VD+FGRAG+L EAYE +K+MP PD VWG LLGACR H +EL
Sbjct: 675 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVEL 734
Query: 519 AEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVKLKRMMKKRKLKKFPGCSWIE 540
AE A+ L +L+P + G +L+S+ +ANA W V K++ +MK+R+++K PG SWIE
Sbjct: 735 AEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
BLAST of Sed0007330 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 340.9 bits (873), Expect = 1.9e-93
Identity = 203/579 (35.06%), Postives = 313/579 (54.06%), Query Frame = 0
Query: 1 MLSLAGGAPNRFPVIRRGFCSF------SDEYVELIETYGRARELNSGKLLHARLIINGL 60
M+S G A N VI R F F + +Y R + G +H + G
Sbjct: 123 MISGYGRAGNSSEVI-RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGF 182
Query: 61 ARLTHFAAKLIGLYAACGKIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSE 120
+ AA LI LY+ + +AR LFD++P + W A+I Y +SG EAL
Sbjct: 183 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT---- 242
Query: 121 LQRGGSRLSEFIVPSVLKACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYAKSGH 180
L G + V S+L AC D G +H+ +K+ LES+ +V + LID+YA+ G
Sbjct: 243 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 302
Query: 181 VEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQ-GLVKPNLVTWNTLVAG 240
+ ++VF+ M +DL++ N+++ Y + A+ L QEM+ ++P+ +T +L +
Sbjct: 303 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 362
Query: 241 FSQMGDEE---------------------------MVYELFKEMEANGI-----QPDVVS 300
SQ+GD M +L A + DV+S
Sbjct: 363 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 422
Query: 301 WTSVISGFVQNYRNEEAFGTFRRMLNSG-FCPTSATISSLLPACASAGNGRRGKEIHGHA 360
W ++ISG+ QN EA + M G T S+LPAC+ AG R+G ++HG
Sbjct: 423 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 482
Query: 361 MVIGVEKDVYVRTALVDMYAKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAI 420
+ G+ DV+V T+L DMY KCG +A LF+++ NS WN++I + HG+ +A+
Sbjct: 483 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 542
Query: 421 ELFHQMMDGDEKKLDHLTFTAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVD 480
LF +M+D + K DH+TF +L+AC H+G+VD G+ FE+MQ+ YGI P ++HY CMVD
Sbjct: 543 MLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 602
Query: 481 VFGRAGKLAEAYEVIKTMPVEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGN 540
++GRAG+L A + IK+M ++PD +WGALL ACR HG ++L + A++HL E+EP VG
Sbjct: 603 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 662
BLAST of Sed0007330 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 339.0 bits (868), Expect = 7.2e-93
Identity = 196/560 (35.00%), Postives = 305/560 (54.46%), Query Frame = 0
Query: 13 PVIRRGFCSFSDEYVELIETYGRARELNSGKLLHARLIINGLARLTHFAAKLIGLYAACG 72
PV + S + E ++ + LN K LHA++I L H A KLI + C
Sbjct: 6 PVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCR 65
Query: 73 KIHDARKLFDKIPQTNPRRWIALIGAYSRSGYYTEALNVFSELQRGGSRLSEFIVPSVLK 132
+ + A ++F+++ + N +LI A++++ +A VFSE+QR G F P +LK
Sbjct: 66 QTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLK 125
Query: 133 ACGHLSDNPTGRKLHTLILKYSLESDAYVCSALIDMYA---------------------- 192
AC S P + +H I K L SD YV +ALID Y+
Sbjct: 126 ACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT 185
Query: 193 -----------KSGHVEKGRRVFESMAGKDLVALNAMVSGYAHHGLAEEALDLVQEMQGL 252
K+G + RR+F+ M +DL++ N M+ GYA +A +L ++M
Sbjct: 186 VSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP-- 245
Query: 253 VKPNLVTWNTLVAGFSQMGDEEMVYELFKEMEANGIQPDVVSWTSVISGFVQNYRNEEAF 312
+ N V+W+T+V G+S+ GD EM +F +M +VV+WT +I+G+ + +EA
Sbjct: 246 -ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEAD 305
Query: 313 GTFRRMLNSGFCPTSATISSLLPACASAGNGRRGKEIHGHAMVIGVEKDVYVRTALVDMY 372
+M+ SG +A + S+L AC +G G IH + + YV AL+DMY
Sbjct: 306 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 365
Query: 373 AKCGYFYEARMLFWRMSERNSATWNSMIFGYANHGYCSEAIELFHQMMDGDEKKLDHLTF 432
AKCG +A +F + +++ +WN+M+ G HG+ EAIELF +M + + D +TF
Sbjct: 366 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR-REGIRPDKVTF 425
Query: 433 TAVLTACGHAGMVDLGKNLFELMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYEVIKTMP 492
AVL +C HAG++D G + F M+ Y +VP+VEHY C+VD+ GR G+L EA +V++TMP
Sbjct: 426 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 485
Query: 493 VEPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDLYANAGSWGRVVK 540
+EP++ +WGALLGACR H E+++A+E +L +L+P GN LLS++YA A W V
Sbjct: 486 MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 545
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038901081.1 | 6.4e-285 | 88.83 | pentatricopeptide repeat-containing protein At5g59600-like [Benincasa hispida] | [more] |
XP_022986839.1 | 4.1e-284 | 88.46 | pentatricopeptide repeat-containing protein At5g59600 [Cucurbita maxima] | [more] |
XP_022148483.1 | 2.7e-283 | 89.03 | pentatricopeptide repeat-containing protein At5g59600-like [Momordica charantia] | [more] |
KAG6570687.1 | 3.9e-282 | 87.93 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023511811.1 | 5.1e-282 | 87.91 | pentatricopeptide repeat-containing protein At5g59600 [Cucurbita pepo subsp. pep... | [more] |
Match Name | E-value | Identity | Description | |
Q9FGR2 | 1.7e-171 | 55.90 | Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana OX... | [more] |
Q9SIT7 | 4.1e-93 | 33.15 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9STE1 | 9.1e-93 | 33.89 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
O81767 | 2.7e-92 | 35.06 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Q9LS72 | 1.0e-91 | 35.00 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JH75 | 2.0e-284 | 88.46 | pentatricopeptide repeat-containing protein At5g59600 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1D479 | 1.3e-283 | 89.03 | pentatricopeptide repeat-containing protein At5g59600-like OS=Momordica charanti... | [more] |
A0A6J1FW47 | 1.2e-281 | 87.93 | pentatricopeptide repeat-containing protein At5g59600 OS=Cucurbita moschata OX=3... | [more] |
A0A5A7V3K8 | 1.8e-280 | 87.00 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CL56 | 1.8e-280 | 87.00 | pentatricopeptide repeat-containing protein At5g59600 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G59600.1 | 1.2e-172 | 55.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G13600.1 | 2.9e-94 | 33.15 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21300.1 | 6.5e-94 | 33.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 1.9e-93 | 35.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 7.2e-93 | 35.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |