Sed0007244 (gene) Chayote v1

Overview


Name	Sed0007244
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cysteine-rich and transmembrane domain-containing protein A-like
Location	LG01: 3433741 .. 3435713 (-)
RNA-Seq Expression	Sed0007244
Synteny	Sed0007244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGATTCGCAACAATATACGCATTAATATAAGATGCATTATGACTCATTATTCTATTCCCACTATGTCCTCTCCAACAATTTAAGCATTTCATAATTCTCAATCCTCCTTTCAAACTCAACCAAATCCCTCGCCGGAAAATCCTCCCGTTATCATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCGCCGCCGCAAGGTTAGGAAAACACCGCCGCCCGCCGCCGTGTGTTTAATTAAAGAGGATTTTCATTTGGTTGATTATTATTGTTGCAGGGTTCCCTCCCAAGGAAGCTTACCCTCCTCCAGGGTACCCTGTTCAGGGCTACCCTGCGGCGCAAGGGTACCCCCCTCCTCCGCCGCCGGGATACGCGCCGCCGTACGCTCCGCCGCAGCAACCTCCTCCCAAAAGTGGAACCACTGGTTGCCTTGAAGGATGGTCCGTCACTTTCTCTCTCTTTTTCAGATCTAATAATTGAATTCTTTAACTACTAATATTAATAATAATTAGGACTCTTTCGTAACTATTTGATTTTTTGTTTAAGAAATTTAAGTTTATTTCTATTCAAATTTTTTGTCAAGTGCTCTATCTTTCCTATAATGTATCATCTTTCTTGAAGAAAGTAATGAATACTAACCAAATTTCAAAAAACAAAAACAAGTTTTTAATTTTTGGAAGCTACTTTTTTTGTTTTCAAATTTTGATTTTGTTTATTAAAATATAGGTAAGATGTAGATATCTAAATAAGAAAAAAGTTATGGTAGGGGAGTTGTTGTAGGCTTAAATTTAAAAAACAAGAAACTAAAAACAAAATGGTTATGAAAGGTTATTTACTTCCTAATTTTTTTCTAAAAAAGCATCCTTATTTCGATGTAAAAAAAGGGTCCAAATTGTGTTAAAAAAAGGGAAGAAAAATTATAGGTTCAAATAAACATTCTTGTGCTTTGATTTTGAGGTTTTTTCATTAAAAAAGAAAAAGAAAAAGAAAATAAAATATACGGATGCAAAATCTTAAAAAACAGTTCAAAAGTCATTCAATCACATTAAATTGATAGTCACAAAATTGATAGATTTTATGAAACTTGAAATTAATAGACTTTAATAAAGTTGAACATTTCATATTTTATTAGGTATGAAATATTTTTTAAAAGTTGATATAACTAAAATAAGAAGTTAAAATTTACTATTTACAACAACTTTCCTTAAATTTTATACCATTTTTTGGATTTTAATAACAGTTTTAGTTATTTTATCTTCAATAAGTTTTAATTAATTTTAGTTTTGAAGTACATTTTTAATGACATTGGTTAAATAATAATAATAATAATAATAGTTTTCAGTCAAGAAAGAATACATTATGAACATATTTTTAAAGATGAATTATTGTCCATGTGATTTTAAAAATTAGAATTTAGATCTTATAATTCTATAAAATTGAAAAAAAAATATATATCATTCATACTTGTTGACAAATTAAATTTTATAACGGGGAACCAAACTGCTGTTCAAGGGATCTAGAATTTTTGCTAAGGATTCTTTTTGAGAATATGGGAGAGACAAATGCTCTATAATTCTCGTTGGTTTATAGTTCATAAATAAAATTGAGTAATTCCTATTAAAAAACATGTAAAAAATTTTAAAAATAAAAAACTAGGAAAAATGTTGTTTTTTAAATGGTGCCTAATTATTTGGACAAAGACTAACAAATGAATGTTTACTATATGATGTTTTTTTGCAGTTTAGCAGCACTTTGTTGTTGTTGTCTATTGGATGCTTGCTTCTAATAAGGATGTATTGATTGATCATCAGTAGCAGAGAACCTTATTGTTAAATTTTAATTTCATTTTAGTATGACAATCATCAAATCGTGTAATATTAATAATGCTTTCAAAGAACACTATTATAACCTAAACAGTCAATTTGCAAATTAGATATCACATAGATGAAAATTTTAAATGCCTACC

mRNA sequence

ATTAGATTCGCAACAATATACGCATTAATATAAGATGCATTATGACTCATTATTCTATTCCCACTATGTCCTCTCCAACAATTTAAGCATTTCATAATTCTCAATCCTCCTTTCAAACTCAACCAAATCCCTCGCCGGAAAATCCTCCCGTTATCATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCGCCGCCGCAAGGGTTCCCTCCCAAGGAAGCTTACCCTCCTCCAGGGTACCCTGTTCAGGGCTACCCTGCGGCGCAAGGGTACCCCCCTCCTCCGCCGCCGGGATACGCGCCGCCGTACGCTCCGCCGCAGCAACCTCCTCCCAAAAGTGGAACCACTGGTTGCCTTGAAGGATGTTTAGCAGCACTTTGTTGTTGTTGTCTATTGGATGCTTGCTTCTAATAAGGATGTATTGATTGATCATCAGTAGCAGAGAACCTTATTGTTAAATTTTAATTTCATTTTAGTATGACAATCATCAAATCGTGTAATATTAATAATGCTTTCAAAGAACACTATTATAACCTAAACAGTCAATTTGCAAATTAGATATCACATAGATGAAAATTTTAAATGCCTACC

Coding sequence (CDS)

ATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCGCCGCCGCAAGGGTTCCCTCCCAAGGAAGCTTACCCTCCTCCAGGGTACCCTGTTCAGGGCTACCCTGCGGCGCAAGGGTACCCCCCTCCTCCGCCGCCGGGATACGCGCCGCCGTACGCTCCGCCGCAGCAACCTCCTCCCAAAAGTGGAACCACTGGTTGCCTTGAAGGATGTTTAGCAGCACTTTGTTGTTGTTGTCTATTGGATGCTTGCTTCTAA

Protein sequence

MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPPPPGYAPPYAPPQQPPPKSGTTGCLEGCLAALCCCCLLDACF

Homology

[Close]

BLAST of Sed0007244 vs. NCBI nr
Match: XP_011649307.1 (cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus] >KGN61955.1 hypothetical protein Csa_005974 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 4.7e-33
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGY--PPPPPPGYAPPYAPPQQ 60
          MSYYDHQQPPVGAPPPQGFPPK+AYPPPGYPVQGYPAAQGY  PPPPPPGYAP Y+   Q
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYAPQYS---Q 60

Query: 61 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
          PPPK+ TTGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKNETTGCLEGCLAALCCCCLLDACF 85

[Close]

BLAST of Sed0007244 vs. NCBI nr
Match: XP_038901964.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa hispida])

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32
Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGY---PPPPPPGYAPPYAPPQ 60
          MSYYDHQQPPVGAPPPQGFP K+AYPPPGYPVQGYPAAQGY   PPPPPPGYAP YA   
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPSKDAYPPPGYPVQGYPAAQGYPQPPPPPPPGYAPQYA--- 60

Query: 61 QPPPKSGTTGCLEGCLAALCCCCLLDACF 87
          QPPPK+ TTGCLEGCLAALCCCCLLDACF
Sbjct: 61 QPPPKNETTGCLEGCLAALCCCCLLDACF 86

[Close]

BLAST of Sed0007244 vs. NCBI nr
Match: KAG6605218.1 (hypothetical protein SDJN03_02535, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32
Identity = 76/87 (87.36%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPPPPG-YAPPYAPPQQP 60
          MSYYDHQQPPVGAPPPQGFPPK+AYPPPGYPVQGYP AQGYPPPPPP  YAPPYAP  Q 
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPPYAPTTQQ 60

Query: 61 PPKSGTTGCLEGCLAALCCCCLLDACF 87
          PP    TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKDKTGCLEGCLAALCCCCLLDACF 87

[Close]

BLAST of Sed0007244 vs. NCBI nr
Match: XP_008457737.2 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 3.1e-32
Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGY--PPPPPPGYAPPYAPPQQ 60
          MSYYDHQQPPVGAPPPQGFPPK++YPPPGYPVQGYPAAQGY  PPPPPPGYAP Y+   Q
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDSYPPPGYPVQGYPAAQGYPPPPPPPPGYAPQYS---Q 60

Query: 61 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
          PPPK+ +TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKNESTGCLEGCLAALCCCCLLDACF 85

[Close]

BLAST of Sed0007244 vs. NCBI nr
Match: XP_022947085.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 [Cucurbita moschata] >XP_023533985.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 75/87 (86.21%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPPPPG-YAPPYAPPQQP 60
          MSYYDHQQPPVGAPPPQGFPPK+AYPPPGYPVQGYP AQGYPPPPPP  YAP YAP  Q 
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQ 60

Query: 61 PPKSGTTGCLEGCLAALCCCCLLDACF 87
          PP    TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKDKTGCLEGCLAALCCCCLLDACF 87

[Close]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-18
Identity = 62/101 (61.39%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFP----PKEAYPPPGYPVQGYPAAQGYPPP-------PPPGY 60
          MS Y+  QPPVG PPPQG+P    PK+AYPP GYP QGYP  QGYPP        P  GY
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYP-QQGYPPQGYPQQGYPQQGY 60

Query: 61 APPYAPPQQPPP----KSGTTGCLEGCLAALCCCCLLDACF 87
           PPYAP   PPP    +  + G LEGCLAALCCCCLLDACF
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-17
Identity = 54/88 (61.36%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 4  YDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPA---AQGYPPPPPPGYAPPYAPPQ--Q 63
          Y  +Q PVGAPPPQG+PPK+ YPP GYP  GYP    AQGYP       A  Y PPQ  Q
Sbjct: 2  YHQEQHPVGAPPPQGYPPKDGYPPAGYPPAGYPPPGYAQGYP-------AQGYPPPQYSQ 61

Query: 64 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
           P +    G LEGCLAALCCCCLLDACF
Sbjct: 62 APQQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-10
Identity = 52/99 (52.53%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 7   QQPP-VGAPPPQGF----PPKEAYPPPG--YPVQGYPAAQGYP---------PP---PPP 66
           QQPP VG PP   +    PPK+AYPPPG  YP QGYP  QGYP         PP   P  
Sbjct: 3   QQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPEQ 62

Query: 67  GYAPPYAPPQQPPPKSGTTGCLEGCLAALCCCCLLDACF 87
           GY     PPQQ   +  + G LEGC+AALCC C+LDACF
Sbjct: 63  GYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 8.7e-06
Identity = 37/53 (69.81%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 9   PPVG-APPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPP---PPGYAPPYAPPQ 58
           PP G APPPQG+PP + YPP GYP QGYP  QGYPPPP   PP  APP APPQ
Sbjct: 389 PPQGYAPPPQGYPP-QGYPPQGYPPQGYP-PQGYPPPPQGAPPQGAPPAAPPQ 439

[Close]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot
Match: A5PLE2 (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=7955 GN=cystm1 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-05
Identity = 47/103 (45.63%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 4   YDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYP--PPPPPGYAPPYAP------ 63
           Y  Q  P    P QG+ P + YPP GYP QGYP AQGYP  PP PPG   PY        
Sbjct: 18  YPAQGYPAQGYPTQGY-PAQGYPPQGYPAQGYP-AQGYPNYPPGPPG---PYTAQPGYQG 77

Query: 64  -PQQPPP--------------KSGTTGCLEGCLAALCCCCLLD 84
            PQ  PP              +SG   CL  C AALCCCCL D
Sbjct: 78  YPQPGPPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of Sed0007244 vs. ExPASy TrEMBL
Match: A0A0A0LJA6 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271480 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGY--PPPPPPGYAPPYAPPQQ 60
          MSYYDHQQPPVGAPPPQGFPPK+AYPPPGYPVQGYPAAQGY  PPPPPPGYAP Y+   Q
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPPPGYAPQYS---Q 60

Query: 61 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
          PPPK+ TTGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKNETTGCLEGCLAALCCCCLLDACF 85

[Close]

BLAST of Sed0007244 vs. ExPASy TrEMBL
Match: A0A1S3C5S7 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103497359 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGY--PPPPPPGYAPPYAPPQQ 60
          MSYYDHQQPPVGAPPPQGFPPK++YPPPGYPVQGYPAAQGY  PPPPPPGYAP Y+   Q
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDSYPPPGYPVQGYPAAQGYPPPPPPPPGYAPQYS---Q 60

Query: 61 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
          PPPK+ +TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKNESTGCLEGCLAALCCCCLLDACF 85

[Close]

BLAST of Sed0007244 vs. ExPASy TrEMBL
Match: A0A6J1G5U7 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451063 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 75/87 (86.21%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPPPPG-YAPPYAPPQQP 60
          MSYYDHQQPPVGAPPPQGFPPK+AYPPPGYPVQGYP AQGYPPPPPP  YAP YAP  Q 
Sbjct: 1  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPTAQGYPPPPPPPVYAPQYAPTTQQ 60

Query: 61 PPKSGTTGCLEGCLAALCCCCLLDACF 87
          PP    TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PPPKDKTGCLEGCLAALCCCCLLDACF 87

[Close]

BLAST of Sed0007244 vs. ExPASy TrEMBL
Match: A0A6J1L666 (cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Cucurbita maxima OX=3661 GN=LOC111499542 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29
Identity = 72/87 (82.76%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPAAQGYPPPPPPG-YAPPYAPPQQP 60
          MSYYDHQQPPVGAPPPQG PPK+AYPPPGYPVQGYP AQ YPPPPPP  YAP YAP  Q 
Sbjct: 1  MSYYDHQQPPVGAPPPQGLPPKDAYPPPGYPVQGYPTAQAYPPPPPPPVYAPQYAPTTQQ 60

Query: 61 PPKSGTTGCLEGCLAALCCCCLLDACF 87
          P     TGCLEGCLAALCCCCLLDACF
Sbjct: 61 PTPKDKTGCLEGCLAALCCCCLLDACF 87

[Close]

BLAST of Sed0007244 vs. ExPASy TrEMBL
Match: A0A6P6GEI9 (cysteine-rich and transmembrane domain-containing protein WIH1 OS=Ziziphus jujuba OX=326968 GN=LOC107424908 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 68/89 (76.40%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGY-PAAQGYPPP--PPPGYAPPYAPPQ 60
          MSYY++QQPPVG PPPQG+PPK+AYPPPGYP QGY P  QGYPP   PP GYAP YA P 
Sbjct: 1  MSYYNNQQPPVGVPPPQGYPPKDAYPPPGYPPQGYPPPQQGYPPQGYPPQGYAPQYAQP- 60

Query: 61 QPPPKSGTTGCLEGCLAALCCCCLLDACF 87
           PP +  TTGCLEGCLAALCCCCLLDACF
Sbjct: 61 -PPRQDNTTGCLEGCLAALCCCCLLDACF 87

[Close]

BLAST of Sed0007244 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 93.6 bits (231), Expect = 8.4e-20
Identity = 62/101 (61.39%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 1  MSYYDHQQPPVGAPPPQGFP----PKEAYPPPGYPVQGYPAAQGYPPP-------PPPGY 60
          MS Y+  QPPVG PPPQG+P    PK+AYPP GYP QGYP  QGYPP        P  GY
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYP-QQGYPPQGYPQQGYPQQGY 60

Query: 61 APPYAPPQQPPP----KSGTTGCLEGCLAALCCCCLLDACF 87
           PPYAP   PPP    +  + G LEGCLAALCCCCLLDACF
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Sed0007244 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 3.5e-18
Identity = 54/88 (61.36%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 4  YDHQQPPVGAPPPQGFPPKEAYPPPGYPVQGYPA---AQGYPPPPPPGYAPPYAPPQ--Q 63
          Y  +Q PVGAPPPQG+PPK+ YPP GYP  GYP    AQGYP       A  Y PPQ  Q
Sbjct: 2  YHQEQHPVGAPPPQGYPPKDGYPPAGYPPAGYPPPGYAQGYP-------AQGYPPPQYSQ 61

Query: 64 PPPKSGTTGCLEGCLAALCCCCLLDACF 87
           P +    G LEGCLAALCCCCLLDACF
Sbjct: 62 APQQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Sed0007244 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-13
Identity = 58/126 (46.03%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 1   MSYYDHQQPPVGAPPPQGFPPKEAYPPPGYPV---------------------------Q 60
           MSY D Q  PV APPPQG+PPKE YPP GYP                            Q
Sbjct: 1   MSYQDPQH-PVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQ 60

Query: 61  GYPAAQGYPPPPPPGYAPPYAPPQQPPP-------------KSGTTGCLEGCLAALCCCC 87
           GYP AQGYPPP  P   PP  P Q PPP             K  + G +EGCLA LCCC 
Sbjct: 61  GYP-AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCV 120

[Close]

BLAST of Sed0007244 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 40/68 (58.82%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 21 PKEAYPPPGYPVQG-YPAAQGYPPP--PPPGYAPPYAPPQQPPPKSGTTGCLEGCLAALC 80
          PK AYP   YP  G YP  QG PPP   PP Y PP  PP  PPP     G LEG LAALC
Sbjct: 4  PKYAYP---YPAPGNYP--QGPPPPVGVPPQYYPPPPPPPPPPPPPRKVGFLEGLLAALC 63

Query: 81 CCCLLDAC 86
          CCCL+D C
Sbjct: 64 CCCLVDEC 66

[Close]

BLAST of Sed0007244 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein )

HSP 1 Score: 44.7 bits (104), Expect = 4.5e-05
Identity = 44/121 (36.36%), Postives = 53/121 (43.80%), Query Frame = 0


Query: 15  PPQGFPP---KEAYPPPGY----PVQGYPAA----QGYPPPPP-PGYAPP---------- 74
           PP+ +PP   +  YPPPGY    P  GYP+     +GYPPP P  GY PP          
Sbjct: 7   PPESYPPPGYQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPPQPYGGYPPPSSRPYEGGYQ 66

Query: 75  ------------YAPPQQPPPK----------------SGTTGCLEGCLAALCCCCLLDA 86
                       + PP  PPP+                SG    + GCLAALCCCCLL+ 
Sbjct: 67  GYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDSDSGCFSFIRGCLAALCCCCLLEE 126

The following BLAST results are available for this feature:

BLAST of Sed0007244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649307.1	4.7e-33	88.64	cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus]...	[more]
XP_038901964.1	2.4e-32	87.64	cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa h...	[more]
KAG6605218.1	2.4e-32	87.36	hypothetical protein SDJN03_02535, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008457737.2	3.1e-32	86.36	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_022947085.1	2.0e-31	86.21	cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 [...	[more]

BLAST of Sed0007244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	1.2e-18	61.39	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	4.9e-17	61.36	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	2.0e-10	52.53	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
P31356	8.7e-06	69.81	Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2	[more]
A5PLE2	2.5e-05	45.63	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio OX=79...	[more]

BLAST of Sed0007244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA6	2.3e-33	88.64	CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271480 PE=3 ...	[more]
A0A1S3C5S7	1.5e-32	86.36	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A6J1G5U7	9.6e-32	86.21	cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 O...	[more]
A0A6J1L666	2.0e-29	82.76	cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Cucurbita...	[more]
A0A6P6GEI9	1.1e-24	76.40	cysteine-rich and transmembrane domain-containing protein WIH1 OS=Ziziphus jujub...	[more]

BLAST of Sed0007244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	8.4e-20	61.39	proline-rich family protein	[more]
AT5G67600.1	3.5e-18	61.36	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	2.6e-13	46.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G33660.1	3.6e-07	58.82	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G12810.1	4.5e-05	36.36	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 44..86 e-value: 7.0E-7 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..62
None	No IPR available	PANTHER	PTHR31568:SF106	SUBFAMILY NOT NAMED	coord: 1..86
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007244.1	Sed0007244.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane